AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02879

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02879.t1 MTR_2g027560 98.077 468 9 0 1 468 22 489 0.0 945
MS.gene02879.t1 MTR_4g134280 74.202 376 91 3 96 468 2 374 0.0 587
MS.gene02879.t1 MTR_1g010120 52.539 453 211 2 7 457 26 476 6.67e-169 484
MS.gene02879.t1 MTR_4g124440 52.036 442 204 5 8 445 29 466 2.42e-157 455
MS.gene02879.t1 MTR_7g085390 50.575 435 207 5 5 434 24 455 7.82e-156 451
MS.gene02879.t1 MTR_3g108600 49.679 467 211 4 1 464 25 470 8.01e-156 451
MS.gene02879.t1 MTR_6g032820 52.038 417 189 6 5 413 24 437 4.32e-151 437
MS.gene02879.t1 MTR_1g053320 50.230 434 208 5 2 429 25 456 6.99e-150 436
MS.gene02879.t1 MTR_4g112025 46.855 461 235 5 7 459 31 489 2.18e-145 426
MS.gene02879.t1 MTR_3g031770 46.578 453 234 3 6 454 26 474 2.08e-144 422
MS.gene02879.t1 MTR_8g092070 45.538 437 233 4 6 439 33 467 2.60e-140 415
MS.gene02879.t1 MTR_3g095050 47.196 428 219 6 7 431 34 457 3.43e-136 401
MS.gene02879.t1 MTR_5g085580 34.792 457 255 15 7 432 25 469 1.19e-70 232
MS.gene02879.t1 MTR_4g088155 34.298 449 263 17 3 429 19 457 3.71e-66 220
MS.gene02879.t1 MTR_1g056640 32.903 465 266 14 6 432 37 493 1.55e-64 216
MS.gene02879.t1 MTR_8g012400 33.634 443 259 15 8 429 30 458 2.05e-64 215
MS.gene02879.t1 MTR_4g069940 31.991 447 278 14 3 432 25 462 1.01e-62 211
MS.gene02879.t1 MTR_3g116510 32.432 444 276 14 3 432 24 457 2.02e-62 210
MS.gene02879.t1 MTR_1g031900 33.333 438 267 14 4 429 21 445 8.62e-62 209
MS.gene02879.t1 MTR_1g031900 33.333 438 267 14 4 429 21 445 1.06e-61 209
MS.gene02879.t1 MTR_8g085720 32.723 437 266 15 7 429 26 448 9.79e-61 206
MS.gene02879.t1 MTR_6g088885 30.296 439 285 12 5 430 25 455 8.57e-60 204
MS.gene02879.t1 MTR_3g065460 32.420 438 271 13 4 429 21 445 2.64e-59 202
MS.gene02879.t1 MTR_5g078200 33.787 441 265 14 1 427 15 442 2.70e-59 206
MS.gene02879.t1 MTR_4g132280 32.184 435 270 13 7 429 45 466 5.96e-59 202
MS.gene02879.t1 MTR_3g080410 38.506 348 196 11 1 341 20 356 7.57e-58 195
MS.gene02879.t1 MTR_3g083580 31.193 436 268 17 7 427 26 444 1.12e-56 196
MS.gene02879.t1 MTR_7g053500 31.591 440 275 15 8 429 27 458 1.45e-56 194
MS.gene02879.t1 MTR_5g078200 33.174 419 255 13 21 427 4 409 2.93e-56 197
MS.gene02879.t1 MTR_4g076570 34.472 322 200 7 6 326 21 332 4.95e-56 190
MS.gene02879.t1 MTR_1g052430 34.049 326 204 7 2 326 27 342 2.30e-55 190
MS.gene02879.t1 MTR_2g034440 34.688 320 198 6 5 323 20 329 4.92e-55 187
MS.gene02879.t1 MTR_1g077990 35.650 331 197 11 6 330 30 350 5.67e-55 189
MS.gene02879.t1 MTR_4g083500 28.600 500 305 14 2 460 39 527 1.09e-54 191
MS.gene02879.t1 MTR_7g026340 31.390 446 265 19 5 428 21 447 1.40e-54 189
MS.gene02879.t1 MTR_2g034470 34.891 321 198 6 5 324 28 338 5.13e-54 185
MS.gene02879.t1 MTR_2g034480 34.451 328 204 6 3 329 23 340 2.43e-53 183
MS.gene02879.t1 MTR_2g034470 35.880 301 182 6 25 324 13 303 2.83e-52 179
MS.gene02879.t1 MTR_4g076255 36.086 327 185 11 6 328 24 330 4.00e-52 179
MS.gene02879.t1 MTR_1g022160 29.741 464 278 16 7 432 24 477 6.36e-52 182
MS.gene02879.t1 MTR_1g022160 29.935 461 275 16 7 429 24 474 7.86e-52 182
MS.gene02879.t1 MTR_1g022160 29.736 454 271 16 7 422 24 467 2.89e-50 178
MS.gene02879.t1 MTR_4g084480 32.537 335 211 10 2 331 27 351 1.19e-49 174
MS.gene02879.t1 MTR_4g084480 32.537 335 211 10 2 331 20 344 1.50e-49 174
MS.gene02879.t1 MTR_4g084480 32.537 335 211 10 2 331 27 351 1.67e-49 174
MS.gene02879.t1 MTR_8g102340 30.392 408 259 13 75 465 62 461 1.95e-49 176
MS.gene02879.t1 MTR_1g007810 35.962 317 184 12 7 316 16 320 3.54e-49 172
MS.gene02879.t1 MTR_7g081350 33.639 327 196 9 5 326 25 335 6.61e-49 171
MS.gene02879.t1 MTR_4g010200 33.333 324 204 9 8 326 34 350 6.77e-49 172
MS.gene02879.t1 MTR_4g114850 34.049 326 199 10 8 326 27 343 3.40e-48 170
MS.gene02879.t1 MTR_8g012400 32.225 391 230 15 60 429 2 378 4.06e-48 170
MS.gene02879.t1 MTR_4g114850 34.049 326 199 10 8 326 27 343 4.27e-48 169
MS.gene02879.t1 MTR_4g114850 34.049 326 199 10 8 326 27 343 6.25e-48 169
MS.gene02879.t1 MTR_4g052970 33.435 329 204 10 6 328 28 347 7.20e-48 169
MS.gene02879.t1 MTR_4g076470 33.230 322 193 10 6 324 22 324 2.04e-46 164
MS.gene02879.t1 MTR_4g076430 32.523 329 200 10 3 328 19 328 3.39e-46 163
MS.gene02879.t1 MTR_7g053500 31.959 388 238 15 60 429 2 381 6.03e-46 164
MS.gene02879.t1 MTR_4g076490 33.235 340 204 11 5 341 95 414 7.16e-46 165
MS.gene02879.t1 MTR_4g076500 33.841 328 197 10 6 328 77 389 2.19e-45 163
MS.gene02879.t1 MTR_4g076440 32.024 331 203 11 1 328 17 328 3.87e-45 160
MS.gene02879.t1 MTR_1g022160 32.523 329 207 9 7 328 24 344 1.13e-44 161
MS.gene02879.t1 MTR_7g081370 33.645 321 187 9 7 326 28 323 1.71e-43 156
MS.gene02879.t1 MTR_2g086530 31.343 335 205 13 8 333 9 327 5.54e-43 155
MS.gene02879.t1 MTR_2g086530 31.343 335 205 13 8 333 30 348 8.55e-43 155
MS.gene02879.t1 MTR_3g116510 32.424 330 202 12 117 432 1 323 1.48e-41 150
MS.gene02879.t1 MTR_2g019345 31.193 327 205 12 8 326 25 339 2.42e-40 149
MS.gene02879.t1 MTR_5g081720 32.308 325 195 13 24 338 54 363 1.06e-33 130
MS.gene02879.t1 MTR_4g036680 32.031 128 81 4 201 327 54 176 4.36e-16 77.8
MS.gene02879.t1 MTR_4g036775 32.031 128 81 4 201 327 54 176 6.76e-16 77.0
MS.gene02879.t1 MTR_2g072500 39.506 81 48 1 348 427 8 88 1.24e-11 61.2
MS.gene02879.t1 MTR_8g085440 37.634 93 55 3 340 429 23 115 6.87e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02879.t1 AT4G17180 73.111 450 111 3 4 453 22 461 0.0 697
MS.gene02879.t1 AT4G31140 51.648 455 215 3 7 459 27 478 2.83e-166 478
MS.gene02879.t1 AT5G58090 53.023 430 197 3 5 431 20 447 6.01e-160 461
MS.gene02879.t1 AT3G24330 50.913 438 207 7 5 437 37 471 7.51e-154 447
MS.gene02879.t1 AT1G64760 50.575 435 206 7 5 434 23 453 1.05e-152 443
MS.gene02879.t1 AT1G64760 50.575 435 206 7 5 434 23 453 1.05e-152 443
MS.gene02879.t1 AT2G19440 51.039 433 203 7 7 434 21 449 1.51e-152 442
MS.gene02879.t1 AT2G19440 51.039 433 203 7 7 434 21 449 1.51e-152 442
MS.gene02879.t1 AT3G04010 48.188 469 226 9 5 466 31 489 6.26e-152 441
MS.gene02879.t1 AT5G18220 49.091 440 209 8 5 435 28 461 1.26e-149 436
MS.gene02879.t1 AT5G20870 47.335 469 228 6 7 459 30 495 7.76e-144 421
MS.gene02879.t1 AT5G64790 46.279 430 226 4 8 434 29 456 8.14e-139 408
MS.gene02879.t1 AT5G58480 47.775 427 217 3 6 431 25 446 1.13e-138 407
MS.gene02879.t1 AT2G05790 34.858 459 256 14 6 432 24 471 1.39e-71 234
MS.gene02879.t1 AT5G55180 34.842 442 263 14 7 432 27 459 4.71e-71 233
MS.gene02879.t1 AT5G55180 34.873 433 257 14 7 423 27 450 6.37e-68 224
MS.gene02879.t1 AT2G01630 34.018 438 264 13 4 429 20 444 1.78e-67 224
MS.gene02879.t1 AT5G24318 33.857 446 260 18 3 429 26 455 1.07e-66 221
MS.gene02879.t1 AT2G01630 33.718 433 262 13 4 424 20 439 5.44e-66 219
MS.gene02879.t1 AT4G26830 32.955 440 271 13 7 432 25 454 7.06e-65 216
MS.gene02879.t1 AT4G26830 32.955 440 271 13 7 432 29 458 8.74e-65 216
MS.gene02879.t1 AT5G24318 33.787 441 257 18 3 424 26 450 2.56e-64 214
MS.gene02879.t1 AT3G23770 34.146 451 265 18 1 429 31 471 1.03e-62 211
MS.gene02879.t1 AT3G07320 34.396 439 262 17 8 429 26 455 1.09e-62 211
MS.gene02879.t1 AT1G66250 32.273 440 266 13 5 429 30 452 2.57e-62 211
MS.gene02879.t1 AT4G34480 33.257 436 272 13 3 429 22 447 4.06e-61 207
MS.gene02879.t1 AT3G55430 35.520 442 255 21 2 429 24 449 7.49e-61 206
MS.gene02879.t1 AT1G11820 32.184 435 270 13 7 429 44 465 4.07e-60 205
MS.gene02879.t1 AT4G14080 32.658 444 270 17 5 429 40 473 6.70e-59 201
MS.gene02879.t1 AT3G13560 32.339 436 267 13 7 429 26 446 9.47e-59 201
MS.gene02879.t1 AT3G13560 32.339 436 267 13 7 429 26 446 9.47e-59 201
MS.gene02879.t1 AT3G13560 32.339 436 267 13 7 429 26 446 9.47e-59 201
MS.gene02879.t1 AT3G13560 32.339 436 267 13 7 429 26 446 9.47e-59 201
MS.gene02879.t1 AT3G13560 32.339 436 267 13 7 429 26 446 9.47e-59 201
MS.gene02879.t1 AT2G16230 31.279 438 281 14 3 429 21 449 1.92e-58 201
MS.gene02879.t1 AT1G11820 31.935 429 267 13 7 423 44 459 3.42e-58 199
MS.gene02879.t1 AT3G57270 34.365 323 201 7 7 328 27 339 9.93e-57 191
MS.gene02879.t1 AT3G57260 34.985 323 193 8 7 328 32 338 9.75e-56 189
MS.gene02879.t1 AT3G57260 34.985 323 193 8 7 328 48 354 1.55e-55 189
MS.gene02879.t1 AT2G39640 32.118 439 262 20 2 427 25 440 6.35e-55 192
MS.gene02879.t1 AT5G56590 27.122 483 321 13 7 468 26 498 2.32e-54 189
MS.gene02879.t1 AT2G01630 32.620 374 230 11 4 368 20 380 2.16e-52 181
MS.gene02879.t1 AT4G18340 33.043 345 216 10 5 343 32 367 3.47e-52 181
MS.gene02879.t1 AT4G18340 33.043 345 216 10 5 343 32 367 4.51e-52 181
MS.gene02879.t1 AT4G34480 36.228 334 197 10 3 329 22 346 1.73e-51 178
MS.gene02879.t1 AT4G16260 35.093 322 196 8 6 326 23 332 3.18e-51 177
MS.gene02879.t1 AT5G24318 34.270 356 216 14 3 352 26 369 1.46e-50 176
MS.gene02879.t1 AT4G29360 27.112 509 308 13 5 459 35 534 2.81e-50 179
MS.gene02879.t1 AT4G29360 27.112 509 308 13 5 459 25 524 3.03e-50 179
MS.gene02879.t1 AT4G16260 35.948 306 183 8 22 326 10 303 8.31e-50 172
MS.gene02879.t1 AT5G42720 34.848 330 198 10 7 328 26 346 2.24e-49 175
MS.gene02879.t1 AT2G26600 33.231 325 203 9 8 326 35 351 1.15e-47 169
MS.gene02879.t1 AT3G57240 33.127 323 198 7 7 328 35 340 9.72e-47 165
MS.gene02879.t1 AT2G27500 32.927 328 206 9 7 328 29 348 2.14e-46 165
MS.gene02879.t1 AT1G30080 32.424 330 204 11 5 326 34 352 2.26e-46 165
MS.gene02879.t1 AT3G15800 32.927 328 205 10 8 328 44 363 2.59e-46 166
MS.gene02879.t1 AT2G27500 32.927 328 206 9 7 328 29 348 2.87e-46 165
MS.gene02879.t1 AT1G30080 32.424 330 204 11 5 326 34 352 2.95e-46 166
MS.gene02879.t1 AT1G32860 32.239 335 210 11 6 332 28 353 4.53e-45 163
MS.gene02879.t1 AT5G24318 33.333 327 190 12 120 429 1 316 1.87e-44 158
MS.gene02879.t1 AT1G11820 31.420 331 211 9 7 329 44 366 1.48e-43 158
MS.gene02879.t1 AT5G42100 33.934 333 202 12 5 328 25 348 1.56e-43 159
MS.gene02879.t1 AT5G42100 33.934 333 202 12 5 328 25 348 1.82e-43 159
MS.gene02879.t1 AT3G61810 32.448 339 200 12 3 329 51 372 2.00e-42 154
MS.gene02879.t1 AT5G20340 33.125 320 194 9 3 317 39 343 2.74e-40 148
MS.gene02879.t1 AT5G20330 32.609 322 197 9 1 317 28 334 3.79e-40 147
MS.gene02879.t1 AT1G33220 33.225 307 188 8 1 302 28 322 4.16e-40 147
MS.gene02879.t1 AT4G34480 31.871 342 216 12 97 429 3 336 6.77e-40 148
MS.gene02879.t1 AT1G77780 31.410 312 197 8 8 316 25 322 4.75e-39 145
MS.gene02879.t1 AT5G20560 31.034 319 205 8 1 316 28 334 1.01e-38 144
MS.gene02879.t1 AT3G46570 33.626 342 205 13 1 333 21 349 1.38e-38 144
MS.gene02879.t1 AT5G20390 31.562 320 199 10 3 317 29 333 2.32e-38 142
MS.gene02879.t1 AT1G77790 30.868 311 197 9 21 326 44 341 2.59e-35 134
MS.gene02879.t1 AT2G27500 32.734 278 173 9 57 328 1 270 2.30e-34 131
MS.gene02879.t1 AT3G55780 27.035 344 224 10 7 336 31 361 3.73e-34 132
MS.gene02879.t1 AT2G26600 33.716 261 157 10 78 332 11 261 5.41e-33 127
MS.gene02879.t1 AT1G09460 37.931 87 52 2 347 432 136 221 2.03e-12 68.6
MS.gene02879.t1 AT2G43670 36.145 83 48 2 348 427 35 115 2.94e-12 63.9
MS.gene02879.t1 AT1G78520 36.842 95 59 1 336 429 20 114 2.96e-11 60.8
MS.gene02879.t1 AT2G42930 35.955 89 52 4 339 423 29 116 7.68e-11 60.5

Find 126 sgRNAs with CRISPR-Local

Find 164 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGAGACTACGCATTCTTTC+AGG 0.139189 2.4:+61516034 MS.gene02879:CDS
CTTCTCTTGCTGCTGATTAT+TGG 0.156586 2.4:+61514883 MS.gene02879:CDS
CCAATAGTTATTGGCGAAAT+TGG 0.175001 2.4:+61516164 MS.gene02879:CDS
TAATGAAATGTTGTCTCTTT+TGG 0.177700 2.4:+61514854 MS.gene02879:CDS
TGCTATACTTAAGGCACTTA+TGG 0.189987 2.4:+61514800 MS.gene02879:CDS
TTCTCTTGCTGCTGATTATT+GGG 0.214879 2.4:+61514884 MS.gene02879:CDS
GAACAAGTTGAGTTATGATT+TGG 0.272885 2.4:-61515932 None:intergenic
GACTAAAGACTGTTGTATAT+TGG 0.276101 2.4:-61515802 None:intergenic
CCCTTCCTTACGAGTTATAA+TGG 0.285266 2.4:+61515747 MS.gene02879:CDS
GTTTACACCAATGCATTTGA+TGG 0.294076 2.4:+61516089 MS.gene02879:CDS
GGGTAGTGGCATTCAGGTTA+TGG 0.296268 2.4:+61514821 MS.gene02879:CDS
TATAGATAAAGGCTTGATTA+AGG 0.300529 2.4:+61516739 MS.gene02879:CDS
CAGTGTCTTTCAAAGTTTCC+TGG 0.320680 2.4:-61516356 None:intergenic
AATCAGCCATAGGTGTAAAC+TGG 0.346400 2.4:+61514682 MS.gene02879:CDS
CCAATTTCGCCAATAACTAT+TGG 0.350316 2.4:-61516164 None:intergenic
CTTGTTGGCGTTATAGATAA+AGG 0.352693 2.4:+61516728 MS.gene02879:CDS
GGAGGTTCGTGTAATGAAAT+TGG 0.352837 2.4:+61516575 MS.gene02879:CDS
GGGTAGATATTAACAACAAA+TGG 0.352876 2.4:-61515978 None:intergenic
AAAAGAGACAACATTTCATT+AGG 0.362438 2.4:-61514852 None:intergenic
AGCAGTGATGTTTGCACCTA+TGG 0.365056 2.4:-61516204 None:intergenic
TTAGTCAAAGCAAATCTTGC+TGG 0.366655 2.4:+61515819 MS.gene02879:CDS
GGAAATCTCCATTGTCATAA+AGG 0.372567 2.4:-61516010 None:intergenic
GGTCAGATGCCAATAGTTAT+TGG 0.377249 2.4:+61516155 MS.gene02879:CDS
GGAGCGAAAAGCACCCTTCC+AGG 0.378091 2.4:+61516338 MS.gene02879:CDS
CGCAAAGCTGCGAGTTTGAC+GGG 0.380578 2.4:+61516657 MS.gene02879:CDS
ACTTATGGGTAGTGGCATTC+AGG 0.391263 2.4:+61514815 MS.gene02879:CDS
TATTCATTAAACCTTGGACT+TGG 0.411447 2.4:+61516410 MS.gene02879:CDS
AACAAGTTGAGTTATGATTT+GGG 0.416896 2.4:-61515931 None:intergenic
GCTATACTTAAGGCACTTAT+GGG 0.423306 2.4:+61514801 MS.gene02879:CDS
GTTTCAGCCCTCGGTAAACT+TGG 0.426733 2.4:+61516128 MS.gene02879:CDS
AGCTGCGAGTTTGACGGGCT+TGG 0.429794 2.4:+61516662 MS.gene02879:CDS
GGTAGATATTAACAACAAAT+GGG 0.431716 2.4:-61515977 None:intergenic
TGTTGTATATTGGTTATTGC+GGG 0.432537 2.4:-61515792 None:intergenic
CGAGTTTGACGGGCTTGGTA+TGG 0.440982 2.4:+61516667 MS.gene02879:CDS
TTGAGTATCTTCCATCTAGA+TGG 0.442611 2.4:+61516462 MS.gene02879:CDS
GATATTCTCGTTTGACGGGC+AGG 0.445943 2.4:+61516382 MS.gene02879:CDS
GAGGCCAAACGCTCCTCCTA+TGG 0.447029 2.4:+61516286 MS.gene02879:CDS
AGCTGATCCTGCTATACTTA+AGG 0.456333 2.4:+61514791 MS.gene02879:CDS
GGAGACTACGCATTCTTTCA+GGG 0.456901 2.4:+61516035 MS.gene02879:CDS
GTTCAGTTCCTCAACTCAAA+TGG 0.462422 2.4:+61515951 MS.gene02879:CDS
CTGAAAGAATGCGTAGTCTC+CGG 0.466675 2.4:-61516033 None:intergenic
TGTCATAAAGGCTAAGAAAC+GGG 0.471983 2.4:-61515998 None:intergenic
TTTGCAACACACCATCTAGA+TGG 0.479659 2.4:-61516473 None:intergenic
ATTCATTAAACCTTGGACTT+GGG 0.480625 2.4:+61516411 MS.gene02879:CDS
CGCAGATGCCTACGAATCAT+CGG 0.480869 2.4:+61515869 MS.gene02879:CDS
TGAAAGAATGCGTAGTCTCC+GGG 0.482830 2.4:-61516032 None:intergenic
TAAAAGATTAACCACTGTAG+AGG 0.484785 2.4:-61514733 None:intergenic
TCGCAAAGCTGCGAGTTTGA+CGG 0.494154 2.4:+61516656 MS.gene02879:CDS
TTGTCATAAAGGCTAAGAAA+CGG 0.495803 2.4:-61515999 None:intergenic
AGGAGGAGCGTTTGGCCTCA+AGG 0.498967 2.4:-61516282 None:intergenic
CAGGAAACTTTGAAAGACAC+TGG 0.500250 2.4:+61516357 MS.gene02879:CDS
ACGTCCATAGGAGGAGCGTT+TGG 0.503328 2.4:-61516290 None:intergenic
ACCATTATAACTCGTAAGGA+AGG 0.506984 2.4:-61515748 None:intergenic
TGTGCCCCAGTTTACACCTA+TGG 0.508472 2.4:-61514688 None:intergenic
TGTAATGAAATTGGTGAGAA+GGG 0.509554 2.4:+61516584 MS.gene02879:CDS
TAGTTATTGGCGAAATTGGT+TGG 0.509669 2.4:+61516168 MS.gene02879:CDS
GTGCAAACATCACTGCTGCT+AGG 0.511820 2.4:+61516210 MS.gene02879:CDS
CGGGAGGACTTCCTTCTCAA+GGG 0.512500 2.4:+61515889 MS.gene02879:CDS
CTGTTGTATATTGGTTATTG+CGG 0.513368 2.4:-61515793 None:intergenic
TATGACAATGGAGATTTCCC+CGG 0.518797 2.4:+61516014 MS.gene02879:CDS
TGGCCTTCAGATGGAGCCAT+AGG 0.519415 2.4:+61516188 MS.gene02879:CDS
TACTATAACCAACCACTGAT+AGG 0.520323 2.4:-61516783 None:intergenic
CTTAAGGCACTTATGGGTAG+TGG 0.523915 2.4:+61514807 MS.gene02879:CDS
AGTGGCATTCAGGTTATGGT+TGG 0.526316 2.4:+61514825 MS.gene02879:CDS
GGAGGAGCGTTTGGCCTCAA+GGG 0.526412 2.4:-61516281 None:intergenic
GCTAAGTATTCATTAAACCT+TGG 0.530961 2.4:+61516404 MS.gene02879:CDS
ATAAGTGCCTTAAGTATAGC+AGG 0.532042 2.4:-61514798 None:intergenic
TCTTTCAAAGTTTCCTGGAA+GGG 0.532140 2.4:-61516351 None:intergenic
TTTCTTAGCCTTTATGACAA+TGG 0.533357 2.4:+61516002 MS.gene02879:CDS
GAAATTGGTTGGCCTTCAGA+TGG 0.533521 2.4:+61516179 MS.gene02879:CDS
GACACTTTAGTTTCAGCCCT+CGG 0.534449 2.4:+61516119 MS.gene02879:CDS
TGCAAACATCACTGCTGCTA+GGG 0.535679 2.4:+61516211 MS.gene02879:CDS
GTGTAATGAAATTGGTGAGA+AGG 0.536712 2.4:+61516583 MS.gene02879:CDS
ATCAGCCATAGGTGTAAACT+GGG 0.537370 2.4:+61514683 MS.gene02879:CDS
GTCTTTCAAAGTTTCCTGGA+AGG 0.539981 2.4:-61516352 None:intergenic
CCGAAAAGATAAACGTCCAT+AGG 0.542846 2.4:-61516302 None:intergenic
ATTGACCATTATAACTCGTA+AGG 0.542975 2.4:-61515752 None:intergenic
AAAAGATTAACCACTGTAGA+GGG 0.544738 2.4:-61514732 None:intergenic
GCACCTATGGCTCCATCTGA+AGG 0.546272 2.4:-61516191 None:intergenic
GCAGATGCCTACGAATCATC+GGG 0.547627 2.4:+61515870 MS.gene02879:CDS
ATGGCTGATTCTGCAGCCAT+AGG 0.547876 2.4:-61514669 None:intergenic
TCGGGAGGACTTCCTTCTCA+AGG 0.550523 2.4:+61515888 MS.gene02879:CDS
ATTCCTTGTTCCCAAGTCCA+AGG 0.554908 2.4:-61516421 None:intergenic
GTAGTTTCCATCAAATGCAT+TGG 0.557042 2.4:-61516096 None:intergenic
TCGTAGGCATCTGCGTTGCA+AGG 0.557060 2.4:-61515861 None:intergenic
TGTTACAGGTATATTGCTGT+AGG 0.557209 2.4:+61515717 MS.gene02879:intron
AACCTGTTAATCACATTGAA+AGG 0.558976 2.4:-61516835 None:intergenic
GAGGAGCGTTTGGCCTCAAG+GGG 0.559000 2.4:-61516280 None:intergenic
ACTTTCCTAGACCCTTCAGT+TGG 0.563537 2.4:+61516692 MS.gene02879:CDS
AAACCTTGGACTTGGGAACA+AGG 0.565820 2.4:+61516418 MS.gene02879:CDS
AATCACCAACTGAAGGGTCT+AGG 0.569011 2.4:-61516697 None:intergenic
AAATGACAATCACCAACTGA+AGG 0.574523 2.4:-61516704 None:intergenic
ATGGGGAGCCATTTGAGTTG+AGG 0.575008 2.4:-61515959 None:intergenic
GCCCTCGGTAAACTTGGATA+CGG 0.577360 2.4:+61516134 MS.gene02879:CDS
AGGAAACTTTGAAAGACACT+GGG 0.581111 2.4:+61516358 MS.gene02879:CDS
AAAAGATAAACGTCCATAGG+AGG 0.586337 2.4:-61516299 None:intergenic
TACATTAGTCAGATCACTCG+AGG 0.586393 2.4:-61516498 None:intergenic
CCATTATAACTCGTAAGGAA+GGG 0.599569 2.4:-61515747 None:intergenic
TGGTTATTGCGGGTATGACA+AGG 0.599811 2.4:-61515782 None:intergenic
TCAGAAAACCTATCAGTGGT+TGG 0.604617 2.4:+61516775 MS.gene02879:CDS
GAACGGAACACCCCTTGAGA+AGG 0.609896 2.4:-61515900 None:intergenic
TATCACATTGCAAGTAACAA+AGG 0.610737 2.4:+61516254 MS.gene02879:CDS
TGATTTGGGTCAATTCAGAA+CGG 0.611680 2.4:-61515917 None:intergenic
AAGTCCTCCCGATGATTCGT+AGG 0.613873 2.4:-61515877 None:intergenic
ACTACTCATGCTGTAACAGA+TGG 0.614671 2.4:+61516059 MS.gene02879:CDS
GGGAGGACTTCCTTCTCAAG+GGG 0.616154 2.4:+61515890 MS.gene02879:CDS
ATGGCTGCAGAATCAGCCAT+AGG 0.621586 2.4:+61514672 MS.gene02879:CDS
CGTAGGCATCTGCGTTGCAA+GGG 0.621828 2.4:-61515860 None:intergenic
ACCGTATCCAAGTTTACCGA+GGG 0.624139 2.4:-61516135 None:intergenic
GATTGCACAACACTTAACTA+CGG 0.625675 2.4:+61516554 MS.gene02879:CDS
ACAAGGAATTGAGAAATGCA+AGG 0.629281 2.4:+61516435 MS.gene02879:CDS
AATGACAATCACCAACTGAA+GGG 0.629772 2.4:-61516703 None:intergenic
ACATTAGTCAGATCACTCGA+GGG 0.642426 2.4:-61516497 None:intergenic
CATCTCAGAAAACCTATCAG+TGG 0.661731 2.4:+61516771 MS.gene02879:CDS
TGCACAACACTTAACTACGG+AGG 0.666246 2.4:+61516557 MS.gene02879:CDS
GACCGTATCCAAGTTTACCG+AGG 0.670407 2.4:-61516136 None:intergenic
AGGAGCGTTTGGCCTCAAGG+GGG 0.680834 2.4:-61516279 None:intergenic
GAAAGAATGCGTAGTCTCCG+GGG 0.685887 2.4:-61516031 None:intergenic
GTAGATATTAACAACAAATG+GGG 0.688981 2.4:-61515976 None:intergenic
CAGATTAAAACCCTCTACAG+TGG 0.689359 2.4:+61514722 MS.gene02879:CDS
CATTAGTCAGATCACTCGAG+GGG 0.704853 2.4:-61516496 None:intergenic
TACTTGCAATGTGATAGACA+AGG 0.721404 2.4:-61516247 None:intergenic
GATGCCTACGAATCATCGGG+AGG 0.723386 2.4:+61515873 MS.gene02879:CDS
GGAAACTTTGAAAGACACTG+GGG 0.751395 2.4:+61516359 MS.gene02879:CDS
GAAACTTTGAAAGACACTGG+GGG 0.761288 2.4:+61516360 MS.gene02879:CDS
TCAGCCATAGGTGTAAACTG+GGG 0.797812 2.4:+61514684 MS.gene02879:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGGTAAAATTTAATATTTAT+TGG + chr2.4:61515489-61515508 MS.gene02879:intron 10.0%
!!! TATTACTTCTAATTTTACAT+GGG + chr2.4:61516804-61516823 MS.gene02879:CDS 15.0%
!! AATATTCTTATCTGAATCAT+TGG - chr2.4:61515426-61515445 None:intergenic 20.0%
!!! GGTTCTTTTTTTTTTTTTGA+GGG + chr2.4:61515351-61515370 MS.gene02879:intron 20.0%
!!! GTATTACTTCTAATTTTACA+TGG + chr2.4:61516803-61516822 MS.gene02879:CDS 20.0%
!!! TAAATTTTACCACAATTATC+AGG - chr2.4:61515481-61515500 None:intergenic 20.0%
!!! TGGTTCTTTTTTTTTTTTTG+AGG + chr2.4:61515350-61515369 MS.gene02879:intron 20.0%
! AAAAGAGACAACATTTCATT+AGG - chr2.4:61514855-61514874 None:intergenic 25.0%
! AACACAAGTTAAAATGTAAG+AGG - chr2.4:61515701-61515720 None:intergenic 25.0%
! AATGTACGGTACTTATATAT+TGG + chr2.4:61515668-61515687 MS.gene02879:intron 25.0%
! ACTGAATCAACATTAAAATC+AGG - chr2.4:61515016-61515035 None:intergenic 25.0%
! ATAAACTTACCTGATAATTG+TGG + chr2.4:61515469-61515488 MS.gene02879:intron 25.0%
! CTAGATTCTCTTAAAATGTA+CGG + chr2.4:61515654-61515673 MS.gene02879:intron 25.0%
! CTGAATCAACATTAAAATCA+GGG - chr2.4:61515015-61515034 None:intergenic 25.0%
! GGTAGATATTAACAACAAAT+GGG - chr2.4:61515980-61515999 None:intergenic 25.0%
! GTAGATATTAACAACAAATG+GGG - chr2.4:61515979-61515998 None:intergenic 25.0%
! TATAGATAAAGGCTTGATTA+AGG + chr2.4:61516739-61516758 MS.gene02879:CDS 25.0%
! TTGAATATTGTGAAGAACTT+AGG + chr2.4:61515248-61515267 MS.gene02879:intron 25.0%
!! AACAAGTTGAGTTATGATTT+GGG - chr2.4:61515934-61515953 None:intergenic 25.0%
!! AATGAAATGTTGTCTCTTTT+GGG + chr2.4:61514855-61514874 MS.gene02879:CDS 25.0%
!! GTACTGTTAAATTTTTACCA+AGG + chr2.4:61515057-61515076 MS.gene02879:intron 25.0%
!! TAATGAAATGTTGTCTCTTT+TGG + chr2.4:61514854-61514873 MS.gene02879:CDS 25.0%
!!! ATCAGGTTTTGTTTTAATCT+TGG + chr2.4:61514951-61514970 MS.gene02879:intron 25.0%
!!! TACATTTTAACTTGTGTTAC+AGG + chr2.4:61515703-61515722 MS.gene02879:intron 25.0%
!!! TTTCTGCTTTTATGACTAAA+GGG + chr2.4:61514919-61514938 MS.gene02879:CDS 25.0%
AAAAGATTAACCACTGTAGA+GGG - chr2.4:61514735-61514754 None:intergenic 30.0%
ATTCATTAAACCTTGGACTT+GGG + chr2.4:61516411-61516430 MS.gene02879:CDS 30.0%
ATTGACCATTATAACTCGTA+AGG - chr2.4:61515755-61515774 None:intergenic 30.0%
CAAAATATTCATCTGCGTTA+CGG - chr2.4:61515598-61515617 None:intergenic 30.0%
GACTAAAGACTGTTGTATAT+TGG - chr2.4:61515805-61515824 None:intergenic 30.0%
GAGATCACATAAACTACAAA+AGG - chr2.4:61515633-61515652 None:intergenic 30.0%
GCTAAGTATTCATTAAACCT+TGG + chr2.4:61516404-61516423 MS.gene02879:CDS 30.0%
GGGTAGATATTAACAACAAA+TGG - chr2.4:61515981-61516000 None:intergenic 30.0%
TAAAAGATTAACCACTGTAG+AGG - chr2.4:61514736-61514755 None:intergenic 30.0%
TATCACATTGCAAGTAACAA+AGG + chr2.4:61516254-61516273 MS.gene02879:CDS 30.0%
TATTCATTAAACCTTGGACT+TGG + chr2.4:61516410-61516429 MS.gene02879:CDS 30.0%
TGTAATGAAATTGGTGAGAA+GGG + chr2.4:61516584-61516603 MS.gene02879:CDS 30.0%
TTGTCATAAAGGCTAAGAAA+CGG - chr2.4:61516002-61516021 None:intergenic 30.0%
! CTGTTGTATATTGGTTATTG+CGG - chr2.4:61515796-61515815 None:intergenic 30.0%
! GAACAAGTTGAGTTATGATT+TGG - chr2.4:61515935-61515954 None:intergenic 30.0%
! TGTTGTATATTGGTTATTGC+GGG - chr2.4:61515795-61515814 None:intergenic 30.0%
! TTTCTTAGCCTTTATGACAA+TGG + chr2.4:61516002-61516021 MS.gene02879:CDS 30.0%
!! CATAAACTACAAAAGGTGTT+TGG - chr2.4:61515626-61515645 None:intergenic 30.0%
!! GTTTCTGCTTTTATGACTAA+AGG + chr2.4:61514918-61514937 MS.gene02879:CDS 30.0%
!! TCGTAACAGTTTTGATCTTT+TGG + chr2.4:61515330-61515349 MS.gene02879:intron 30.0%
!! TTCTGCTTTTATGACTAAAG+GGG + chr2.4:61514920-61514939 MS.gene02879:CDS 30.0%
!!! TTTTTTGAGGGATGATCTTT+TGG + chr2.4:61515363-61515382 MS.gene02879:intron 30.0%
AAAAGATAAACGTCCATAGG+AGG - chr2.4:61516302-61516321 None:intergenic 35.0%
AAATGACAATCACCAACTGA+AGG - chr2.4:61516707-61516726 None:intergenic 35.0%
AATGACAATCACCAACTGAA+GGG - chr2.4:61516706-61516725 None:intergenic 35.0%
ACAAGGAATTGAGAAATGCA+AGG + chr2.4:61516435-61516454 MS.gene02879:CDS 35.0%
ACCATTATAACTCGTAAGGA+AGG - chr2.4:61515751-61515770 None:intergenic 35.0%
ATAAGTGCCTTAAGTATAGC+AGG - chr2.4:61514801-61514820 None:intergenic 35.0%
CAGTAACTATAACTACTCCT+TGG - chr2.4:61515077-61515096 None:intergenic 35.0%
CCAATAGTTATTGGCGAAAT+TGG + chr2.4:61516164-61516183 MS.gene02879:CDS 35.0%
CCAATTTCGCCAATAACTAT+TGG - chr2.4:61516167-61516186 None:intergenic 35.0%
CCATTATAACTCGTAAGGAA+GGG - chr2.4:61515750-61515769 None:intergenic 35.0%
CTTGTTGGCGTTATAGATAA+AGG + chr2.4:61516728-61516747 MS.gene02879:CDS 35.0%
GATTGCACAACACTTAACTA+CGG + chr2.4:61516554-61516573 MS.gene02879:CDS 35.0%
GGAAATCTCCATTGTCATAA+AGG - chr2.4:61516013-61516032 None:intergenic 35.0%
GTAGTTTCCATCAAATGCAT+TGG - chr2.4:61516099-61516118 None:intergenic 35.0%
GTGTAATGAAATTGGTGAGA+AGG + chr2.4:61516583-61516602 MS.gene02879:CDS 35.0%
GTTTACACCAATGCATTTGA+TGG + chr2.4:61516089-61516108 MS.gene02879:CDS 35.0%
TACTATAACCAACCACTGAT+AGG - chr2.4:61516786-61516805 None:intergenic 35.0%
TACTTGCAATGTGATAGACA+AGG - chr2.4:61516250-61516269 None:intergenic 35.0%
TAGTTATTGGCGAAATTGGT+TGG + chr2.4:61516168-61516187 MS.gene02879:CDS 35.0%
TCTTTCAAAGTTTCCTGGAA+GGG - chr2.4:61516354-61516373 None:intergenic 35.0%
TGTCATAAAGGCTAAGAAAC+GGG - chr2.4:61516001-61516020 None:intergenic 35.0%
TGTTACAGGTATATTGCTGT+AGG + chr2.4:61515717-61515736 MS.gene02879:intron 35.0%
TTAGTCAAAGCAAATCTTGC+TGG + chr2.4:61515819-61515838 MS.gene02879:CDS 35.0%
TTGAGTATCTTCCATCTAGA+TGG + chr2.4:61516462-61516481 MS.gene02879:CDS 35.0%
! AGGAAACTTTGAAAGACACT+GGG + chr2.4:61516358-61516377 MS.gene02879:CDS 35.0%
! CACTGCAAGCAATTTTCATA+TGG - chr2.4:61516529-61516548 None:intergenic 35.0%
! CCTATGGACGTTTATCTTTT+CGG + chr2.4:61516302-61516321 MS.gene02879:CDS 35.0%
! CTTTTCGGTCTATTTGATGA+AGG + chr2.4:61516317-61516336 MS.gene02879:CDS 35.0%
! GCTATACTTAAGGCACTTAT+GGG + chr2.4:61514801-61514820 MS.gene02879:CDS 35.0%
! TGATTTGGGTCAATTCAGAA+CGG - chr2.4:61515920-61515939 None:intergenic 35.0%
! TGCTATACTTAAGGCACTTA+TGG + chr2.4:61514800-61514819 MS.gene02879:CDS 35.0%
! TTCTCTTGCTGCTGATTATT+GGG + chr2.4:61514884-61514903 MS.gene02879:CDS 35.0%
! TTGGTTCTTAGTTGCAAGTT+TGG + chr2.4:61515382-61515401 MS.gene02879:intron 35.0%
!! GGTACTTATATATTGGCTTC+AGG + chr2.4:61515675-61515694 MS.gene02879:intron 35.0%
!! TCTGCTTTTATGACTAAAGG+GGG + chr2.4:61514921-61514940 MS.gene02879:CDS 35.0%
!!! GGTGATTGTCATTTTCTTGT+TGG + chr2.4:61516713-61516732 MS.gene02879:CDS 35.0%
AATCAGCCATAGGTGTAAAC+TGG + chr2.4:61514682-61514701 MS.gene02879:CDS 40.0%
ACATTAGTCAGATCACTCGA+GGG - chr2.4:61516500-61516519 None:intergenic 40.0%
ACTACTCATGCTGTAACAGA+TGG + chr2.4:61516059-61516078 MS.gene02879:CDS 40.0%
AGCTGATCCTGCTATACTTA+AGG + chr2.4:61514791-61514810 MS.gene02879:CDS 40.0%
ATCAGCCATAGGTGTAAACT+GGG + chr2.4:61514683-61514702 MS.gene02879:CDS 40.0%
CAGATTAAAACCCTCTACAG+TGG + chr2.4:61514722-61514741 MS.gene02879:CDS 40.0%
CAGTGTCTTTCAAAGTTTCC+TGG - chr2.4:61516359-61516378 None:intergenic 40.0%
CATCTCAGAAAACCTATCAG+TGG + chr2.4:61516771-61516790 MS.gene02879:CDS 40.0%
CCCTTCCTTACGAGTTATAA+TGG + chr2.4:61515747-61515766 MS.gene02879:CDS 40.0%
CCGAAAAGATAAACGTCCAT+AGG - chr2.4:61516305-61516324 None:intergenic 40.0%
GGAGGTTCGTGTAATGAAAT+TGG + chr2.4:61516575-61516594 MS.gene02879:CDS 40.0%
GGTCAGATGCCAATAGTTAT+TGG + chr2.4:61516155-61516174 MS.gene02879:CDS 40.0%
GTCTTTCAAAGTTTCCTGGA+AGG - chr2.4:61516355-61516374 None:intergenic 40.0%
GTTCAGTTCCTCAACTCAAA+TGG + chr2.4:61515951-61515970 MS.gene02879:CDS 40.0%
TACATTAGTCAGATCACTCG+AGG - chr2.4:61516501-61516520 None:intergenic 40.0%
TATGACAATGGAGATTTCCC+CGG + chr2.4:61516014-61516033 MS.gene02879:CDS 40.0%
TCAGAAAACCTATCAGTGGT+TGG + chr2.4:61516775-61516794 MS.gene02879:CDS 40.0%
TTTGCAACACACCATCTAGA+TGG - chr2.4:61516476-61516495 None:intergenic 40.0%
! CAGGAAACTTTGAAAGACAC+TGG + chr2.4:61516357-61516376 MS.gene02879:CDS 40.0%
! CTTCTCTTGCTGCTGATTAT+TGG + chr2.4:61514883-61514902 MS.gene02879:CDS 40.0%
! GAAACTTTGAAAGACACTGG+GGG + chr2.4:61516360-61516379 MS.gene02879:CDS 40.0%
! GAAATGTTGTCTCTTTTGGG+TGG + chr2.4:61514858-61514877 MS.gene02879:CDS 40.0%
! GGAAACTTTGAAAGACACTG+GGG + chr2.4:61516359-61516378 MS.gene02879:CDS 40.0%
AAACCTTGGACTTGGGAACA+AGG + chr2.4:61516418-61516437 MS.gene02879:CDS 45.0%
AATCACCAACTGAAGGGTCT+AGG - chr2.4:61516700-61516719 None:intergenic 45.0%
ACCGTATCCAAGTTTACCGA+GGG - chr2.4:61516138-61516157 None:intergenic 45.0%
ACTTTCCTAGACCCTTCAGT+TGG + chr2.4:61516692-61516711 MS.gene02879:CDS 45.0%
AGCAGTGATGTTTGCACCTA+TGG - chr2.4:61516207-61516226 None:intergenic 45.0%
ATTCCTTGTTCCCAAGTCCA+AGG - chr2.4:61516424-61516443 None:intergenic 45.0%
CATTAGTCAGATCACTCGAG+GGG - chr2.4:61516499-61516518 None:intergenic 45.0%
CTGAAAGAATGCGTAGTCTC+CGG - chr2.4:61516036-61516055 None:intergenic 45.0%
GGAGACTACGCATTCTTTCA+GGG + chr2.4:61516035-61516054 MS.gene02879:CDS 45.0%
TCAGCCATAGGTGTAAACTG+GGG + chr2.4:61514684-61514703 MS.gene02879:CDS 45.0%
TGAAAGAATGCGTAGTCTCC+GGG - chr2.4:61516035-61516054 None:intergenic 45.0%
TGCAAACATCACTGCTGCTA+GGG + chr2.4:61516211-61516230 MS.gene02879:CDS 45.0%
TGCACAACACTTAACTACGG+AGG + chr2.4:61516557-61516576 MS.gene02879:CDS 45.0%
TGGGGGATATTCTCGTTTGA+CGG + chr2.4:61516377-61516396 MS.gene02879:CDS 45.0%
TGGTTATTGCGGGTATGACA+AGG - chr2.4:61515785-61515804 None:intergenic 45.0%
! ACTTATGGGTAGTGGCATTC+AGG + chr2.4:61514815-61514834 MS.gene02879:CDS 45.0%
! AGTGGCATTCAGGTTATGGT+TGG + chr2.4:61514825-61514844 MS.gene02879:CDS 45.0%
! CTTAAGGCACTTATGGGTAG+TGG + chr2.4:61514807-61514826 MS.gene02879:CDS 45.0%
! GACACTTTAGTTTCAGCCCT+CGG + chr2.4:61516119-61516138 MS.gene02879:CDS 45.0%
! GCTGCTAGGGTTTTCAATCA+AGG + chr2.4:61516224-61516243 MS.gene02879:CDS 45.0%
!! GAAATTGGTTGGCCTTCAGA+TGG + chr2.4:61516179-61516198 MS.gene02879:CDS 45.0%
AAGTCCTCCCGATGATTCGT+AGG - chr2.4:61515880-61515899 None:intergenic 50.0%
ATGGCTGCAGAATCAGCCAT+AGG + chr2.4:61514672-61514691 MS.gene02879:CDS 50.0%
CGCAGATGCCTACGAATCAT+CGG + chr2.4:61515869-61515888 MS.gene02879:CDS 50.0%
CGGAGACTACGCATTCTTTC+AGG + chr2.4:61516034-61516053 MS.gene02879:CDS 50.0%
GAAAGAATGCGTAGTCTCCG+GGG - chr2.4:61516034-61516053 None:intergenic 50.0%
GACCGTATCCAAGTTTACCG+AGG - chr2.4:61516139-61516158 None:intergenic 50.0%
GCAGATGCCTACGAATCATC+GGG + chr2.4:61515870-61515889 MS.gene02879:CDS 50.0%
GCCCTCGGTAAACTTGGATA+CGG + chr2.4:61516134-61516153 MS.gene02879:CDS 50.0%
GGGGGATATTCTCGTTTGAC+GGG + chr2.4:61516378-61516397 MS.gene02879:CDS 50.0%
GTAACAAAGGAACCCCCTTG+AGG + chr2.4:61516267-61516286 MS.gene02879:CDS 50.0%
GTGCAAACATCACTGCTGCT+AGG + chr2.4:61516210-61516229 MS.gene02879:CDS 50.0%
GTTTCAGCCCTCGGTAAACT+TGG + chr2.4:61516128-61516147 MS.gene02879:CDS 50.0%
TCGCAAAGCTGCGAGTTTGA+CGG + chr2.4:61516656-61516675 MS.gene02879:CDS 50.0%
TGTGCCCCAGTTTACACCTA+TGG - chr2.4:61514691-61514710 None:intergenic 50.0%
! GATATTCTCGTTTGACGGGC+AGG + chr2.4:61516382-61516401 MS.gene02879:CDS 50.0%
! GGGTAGTGGCATTCAGGTTA+TGG + chr2.4:61514821-61514840 MS.gene02879:CDS 50.0%
!! ATGGGGAGCCATTTGAGTTG+AGG - chr2.4:61515962-61515981 None:intergenic 50.0%
!! CTAAAGGGGGTGCTGATATC+AGG + chr2.4:61514934-61514953 MS.gene02879:CDS 50.0%
CGCAAAGCTGCGAGTTTGAC+GGG + chr2.4:61516657-61516676 MS.gene02879:CDS 55.0%
CGGGAGGACTTCCTTCTCAA+GGG + chr2.4:61515889-61515908 MS.gene02879:CDS 55.0%
CGTAGGCATCTGCGTTGCAA+GGG - chr2.4:61515863-61515882 None:intergenic 55.0%
GAACGGAACACCCCTTGAGA+AGG - chr2.4:61515903-61515922 None:intergenic 55.0%
GATGCCTACGAATCATCGGG+AGG + chr2.4:61515873-61515892 MS.gene02879:CDS 55.0%
GCACCTATGGCTCCATCTGA+AGG - chr2.4:61516194-61516213 None:intergenic 55.0%
GGGAGGACTTCCTTCTCAAG+GGG + chr2.4:61515890-61515909 MS.gene02879:CDS 55.0%
TCGGGAGGACTTCCTTCTCA+AGG + chr2.4:61515888-61515907 MS.gene02879:CDS 55.0%
TCGTAGGCATCTGCGTTGCA+AGG - chr2.4:61515864-61515883 None:intergenic 55.0%
TGGCCTTCAGATGGAGCCAT+AGG + chr2.4:61516188-61516207 MS.gene02879:CDS 55.0%
!! ACGTCCATAGGAGGAGCGTT+TGG - chr2.4:61516293-61516312 None:intergenic 55.0%
!! CGAGTTTGACGGGCTTGGTA+TGG + chr2.4:61516667-61516686 MS.gene02879:CDS 55.0%
GAGGCCAAACGCTCCTCCTA+TGG + chr2.4:61516286-61516305 MS.gene02879:CDS 60.0%
!! AGCTGCGAGTTTGACGGGCT+TGG + chr2.4:61516662-61516681 MS.gene02879:CDS 60.0%
!! AGGAGCGTTTGGCCTCAAGG+GGG - chr2.4:61516282-61516301 None:intergenic 60.0%
!! AGGAGGAGCGTTTGGCCTCA+AGG - chr2.4:61516285-61516304 None:intergenic 60.0%
!! GAGGAGCGTTTGGCCTCAAG+GGG - chr2.4:61516283-61516302 None:intergenic 60.0%
!! GGAGCGAAAAGCACCCTTCC+AGG + chr2.4:61516338-61516357 MS.gene02879:CDS 60.0%
!! GGAGGAGCGTTTGGCCTCAA+GGG - chr2.4:61516284-61516303 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 61514672 61516847 61514672 ID=MS.gene02879
chr2.4 mRNA 61514672 61516847 61514672 ID=MS.gene02879.t1;Parent=MS.gene02879
chr2.4 exon 61514672 61514955 61514672 ID=MS.gene02879.t1.exon1;Parent=MS.gene02879.t1
chr2.4 CDS 61514672 61514955 61514672 ID=cds.MS.gene02879.t1;Parent=MS.gene02879.t1
chr2.4 exon 61515725 61516847 61515725 ID=MS.gene02879.t1.exon2;Parent=MS.gene02879.t1
chr2.4 CDS 61515725 61516847 61515725 ID=cds.MS.gene02879.t1;Parent=MS.gene02879.t1
Gene Sequence

>MS.gene02879

ATGGCTGCAGAATCAGCCATAGGTGTAAACTGGGGCACACTATCTTCACACAGATTAAAACCCTCTACAGTGGTTAATCTTTTAAGAGATAACAAGATCTCAAAAGTGAAGCTTTTTGAAGCTGATCCTGCTATACTTAAGGCACTTATGGGTAGTGGCATTCAGGTTATGGTTGGTATACCTAATGAAATGTTGTCTCTTTTGGGTGGTTCTTCTCTTGCTGCTGATTATTGGGTTCAAAGAAATGTTTCTGCTTTTATGACTAAAGGGGGTGCTGATATCAGGTTTTGTTTTAATCTTGGCTCAGATTTAGTTTTGATCTGATTAGTTAACTTTTAAACCCTGATTTTAATGTTGATTCAGTATAATGAAGAATGTTTTATTTGTACTGTTAAATTTTTACCAAGGAGTAGTTATAGTTACTGTGTTTAAGTATCAGTTACTTACTCTATTTATTTAATTTGTTTTAGTTTTAAATTTTTTGATAAATTGTTAATTAAGCTGATGACAGTGACTATGAGCATTGAGCAGATTTGTTTTACTCTAAAGTTGTTGATGTTAGCAGTTAGTGATTGTTTGAATATTGTGAAGAACTTAGGATGAATCATTCTGCAAAAAATATATAGTTTTGATCAAGACTTAAAAGTGTTTTGTGTTATCGTAACAGTTTTGATCTTTTGGTTCTTTTTTTTTTTTTGAGGGATGATCTTTTGGTTCTTAGTTGCAAGTTTGGATTGATTATTAGTTGTGACCAATGATTCAGATAAGAATATTTGTCTTTTGTGCGATAAAAAGTTATAAACTTACCTGATAATTGTGGTAAAATTTAATATTTATTGGATTTTGATCTAGTTCTGAATTATAGCTTTCTAAAACAGAAACTATAGTAGACAGTAGCATAAGTTTTCATTATTGTTTTCTCTCCGTAACGCAGATGAATATTTTGTTCTACCAAACACCTTTTGTAGTTTATGTGATCTCGCTAGATTCTCTTAAAATGTACGGTACTTATATATTGGCTTCAGGCCTCTTACATTTTAACTTGTGTTACAGGTATATTGCTGTAGGAAATGAACCCTTCCTTACGAGTTATAATGGTCAATTTATAAACCTTGTCATACCCGCAATAACCAATATACAACAGTCTTTAGTCAAAGCAAATCTTGCTGGTTATGTAAAGATAGTTGTCCCTTGCAACGCAGATGCCTACGAATCATCGGGAGGACTTCCTTCTCAAGGGGTGTTCCGTTCTGAATTGACCCAAATCATAACTCAACTTGTTCAGTTCCTCAACTCAAATGGCTCCCCATTTGTTGTTAATATCTACCCGTTTCTTAGCCTTTATGACAATGGAGATTTCCCCGGAGACTACGCATTCTTTCAGGGAACTACTCATGCTGTAACAGATGGTTCAAATGTTTACACCAATGCATTTGATGGAAACTACGACACTTTAGTTTCAGCCCTCGGTAAACTTGGATACGGTCAGATGCCAATAGTTATTGGCGAAATTGGTTGGCCTTCAGATGGAGCCATAGGTGCAAACATCACTGCTGCTAGGGTTTTCAATCAAGGCCTTGTCTATCACATTGCAAGTAACAAAGGAACCCCCTTGAGGCCAAACGCTCCTCCTATGGACGTTTATCTTTTCGGTCTATTTGATGAAGGAGCGAAAAGCACCCTTCCAGGAAACTTTGAAAGACACTGGGGGATATTCTCGTTTGACGGGCAGGCTAAGTATTCATTAAACCTTGGACTTGGGAACAAGGAATTGAGAAATGCAAGGAATGTTGAGTATCTTCCATCTAGATGGTGTGTTGCAAACCCCTCGAGTGATCTGACTAATGTAGTAAACCATATGAAAATTGCTTGCAGTGTTGCAGATTGCACAACACTTAACTACGGAGGTTCGTGTAATGAAATTGGTGAGAAGGGTAACATATCATATGCTTTTAACAGCTACTATCAGCTAAGAATGCAAGATTCGCAAAGCTGCGAGTTTGACGGGCTTGGTATGGTTACTTTCCTAGACCCTTCAGTTGGTGATTGTCATTTTCTTGTTGGCGTTATAGATAAAGGCTTGATTAAGGATTCATCTGCATCTCAGAAAACCTATCAGTGGTTGGTTATAGTATTACTTCTAATTTTACATGGGACTTTTTTCCTTTCAATGTGA
Protein sequence

>MS.gene02879.t1

MAAESAIGVNWGTLSSHRLKPSTVVNLLRDNKISKVKLFEADPAILKALMGSGIQVMVGIPNEMLSLLGGSSLAADYWVQRNVSAFMTKGGADIRYIAVGNEPFLTSYNGQFINLVIPAITNIQQSLVKANLAGYVKIVVPCNADAYESSGGLPSQGVFRSELTQIITQLVQFLNSNGSPFVVNIYPFLSLYDNGDFPGDYAFFQGTTHAVTDGSNVYTNAFDGNYDTLVSALGKLGYGQMPIVIGEIGWPSDGAIGANITAARVFNQGLVYHIASNKGTPLRPNAPPMDVYLFGLFDEGAKSTLPGNFERHWGIFSFDGQAKYSLNLGLGNKELRNARNVEYLPSRWCVANPSSDLTNVVNHMKIACSVADCTTLNYGGSCNEIGEKGNISYAFNSYYQLRMQDSQSCEFDGLGMVTFLDPSVGDCHFLVGVIDKGLIKDSSASQKTYQWLVIVLLLILHGTFFLSM