Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26730.t1 | XP_003609925.2 | 97.6 | 493 | 11 | 1 | 1 | 493 | 1 | 492 | 6.70E-280 | 972.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26730.t1 | Q9M088 | 56.1 | 478 | 203 | 3 | 6 | 483 | 7 | 477 | 3.6e-149 | 529.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26730.t1 | G7JR55 | 97.6 | 493 | 11 | 1 | 1 | 493 | 1 | 492 | 4.9e-280 | 972.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049239 | MS.gene26730 | 0.821025 | 5.03E-53 | -1.69E-46 |
MS.gene054429 | MS.gene26730 | 0.818525 | 1.87E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene26730 | MS.gene43455 | PPI |
MS.gene026550 | MS.gene26730 | PPI |
MS.gene012767 | MS.gene26730 | PPI |
MS.gene26730 | MS.gene003156 | PPI |
MS.gene048284 | MS.gene26730 | PPI |
MS.gene83087 | MS.gene26730 | PPI |
MS.gene25205 | MS.gene26730 | PPI |
MS.gene26730 | MS.gene98955 | PPI |
MS.gene02879 | MS.gene26730 | PPI |
MS.gene26730 | MS.gene03697 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26730.t1 | MTR_4g124440 | 97.566 | 493 | 11 | 1 | 1 | 493 | 1 | 492 | 0.0 | 992 |
MS.gene26730.t1 | MTR_1g010120 | 57.456 | 456 | 189 | 3 | 1 | 455 | 1 | 452 | 0.0 | 526 |
MS.gene26730.t1 | MTR_3g108600 | 51.458 | 480 | 209 | 4 | 4 | 481 | 8 | 465 | 2.66e-167 | 481 |
MS.gene26730.t1 | MTR_6g032820 | 52.608 | 441 | 197 | 6 | 1 | 433 | 1 | 437 | 6.67e-159 | 458 |
MS.gene26730.t1 | MTR_4g112025 | 49.889 | 451 | 216 | 6 | 11 | 455 | 14 | 460 | 1.05e-158 | 461 |
MS.gene26730.t1 | MTR_2g027560 | 52.055 | 438 | 202 | 5 | 31 | 464 | 31 | 464 | 3.87e-156 | 453 |
MS.gene26730.t1 | MTR_1g053320 | 46.200 | 500 | 247 | 7 | 1 | 492 | 1 | 486 | 9.02e-156 | 452 |
MS.gene26730.t1 | MTR_7g085390 | 52.009 | 448 | 206 | 5 | 27 | 469 | 25 | 468 | 9.38e-156 | 452 |
MS.gene26730.t1 | MTR_8g092070 | 48.018 | 454 | 229 | 4 | 6 | 455 | 11 | 461 | 3.38e-155 | 454 |
MS.gene26730.t1 | MTR_3g095050 | 45.661 | 484 | 242 | 8 | 13 | 481 | 10 | 487 | 2.34e-138 | 407 |
MS.gene26730.t1 | MTR_4g134280 | 49.606 | 381 | 180 | 6 | 117 | 493 | 2 | 374 | 2.07e-126 | 373 |
MS.gene26730.t1 | MTR_3g031770 | 44.118 | 442 | 240 | 5 | 21 | 461 | 20 | 455 | 5.44e-126 | 376 |
MS.gene26730.t1 | MTR_4g088155 | 33.262 | 466 | 274 | 19 | 14 | 455 | 9 | 461 | 1.72e-68 | 226 |
MS.gene26730.t1 | MTR_8g012400 | 34.989 | 443 | 260 | 17 | 30 | 455 | 31 | 462 | 5.26e-65 | 218 |
MS.gene26730.t1 | MTR_3g116510 | 33.260 | 457 | 273 | 16 | 3 | 443 | 8 | 448 | 2.74e-64 | 215 |
MS.gene26730.t1 | MTR_4g069940 | 32.527 | 455 | 276 | 16 | 10 | 443 | 9 | 453 | 1.43e-63 | 214 |
MS.gene26730.t1 | MTR_1g031900 | 32.696 | 471 | 285 | 16 | 11 | 468 | 6 | 457 | 3.35e-60 | 206 |
MS.gene26730.t1 | MTR_1g031900 | 33.480 | 454 | 275 | 16 | 11 | 451 | 6 | 445 | 1.29e-59 | 204 |
MS.gene26730.t1 | MTR_4g010200 | 36.389 | 360 | 206 | 13 | 7 | 351 | 5 | 356 | 4.54e-59 | 200 |
MS.gene26730.t1 | MTR_2g034480 | 34.463 | 354 | 220 | 8 | 1 | 352 | 1 | 344 | 4.24e-58 | 196 |
MS.gene26730.t1 | MTR_5g078200 | 31.729 | 457 | 280 | 17 | 10 | 451 | 5 | 444 | 4.81e-57 | 200 |
MS.gene26730.t1 | MTR_5g078200 | 32.084 | 427 | 259 | 17 | 39 | 451 | 2 | 411 | 1.18e-55 | 196 |
MS.gene26730.t1 | MTR_7g053500 | 32.184 | 435 | 259 | 19 | 39 | 451 | 38 | 458 | 2.20e-55 | 192 |
MS.gene26730.t1 | MTR_2g034470 | 36.218 | 312 | 189 | 6 | 40 | 349 | 6 | 309 | 4.09e-55 | 187 |
MS.gene26730.t1 | MTR_1g056640 | 29.638 | 469 | 275 | 18 | 24 | 451 | 36 | 490 | 4.52e-55 | 192 |
MS.gene26730.t1 | MTR_2g034470 | 36.218 | 312 | 189 | 6 | 40 | 349 | 41 | 344 | 5.43e-55 | 188 |
MS.gene26730.t1 | MTR_1g022160 | 29.654 | 462 | 276 | 15 | 28 | 451 | 24 | 474 | 2.18e-54 | 190 |
MS.gene26730.t1 | MTR_3g083580 | 28.571 | 462 | 299 | 16 | 1 | 449 | 1 | 444 | 2.41e-54 | 190 |
MS.gene26730.t1 | MTR_8g085720 | 30.416 | 457 | 289 | 16 | 10 | 451 | 6 | 448 | 3.61e-54 | 189 |
MS.gene26730.t1 | MTR_5g085580 | 31.155 | 459 | 270 | 18 | 24 | 451 | 23 | 466 | 4.82e-54 | 189 |
MS.gene26730.t1 | MTR_4g076570 | 33.861 | 316 | 198 | 7 | 32 | 345 | 26 | 332 | 5.36e-54 | 186 |
MS.gene26730.t1 | MTR_1g022160 | 29.515 | 454 | 273 | 14 | 28 | 443 | 24 | 468 | 6.07e-54 | 189 |
MS.gene26730.t1 | MTR_8g012400 | 34.694 | 392 | 228 | 16 | 81 | 455 | 2 | 382 | 6.81e-54 | 186 |
MS.gene26730.t1 | MTR_3g065460 | 30.819 | 464 | 276 | 21 | 10 | 451 | 5 | 445 | 7.39e-54 | 189 |
MS.gene26730.t1 | MTR_2g034440 | 36.246 | 309 | 186 | 7 | 40 | 345 | 33 | 333 | 1.52e-53 | 184 |
MS.gene26730.t1 | MTR_1g022160 | 29.360 | 453 | 273 | 14 | 28 | 442 | 24 | 467 | 2.31e-53 | 187 |
MS.gene26730.t1 | MTR_1g052430 | 33.956 | 321 | 201 | 8 | 25 | 343 | 29 | 340 | 3.52e-53 | 184 |
MS.gene26730.t1 | MTR_7g081350 | 36.494 | 348 | 205 | 11 | 1 | 345 | 1 | 335 | 3.93e-53 | 182 |
MS.gene26730.t1 | MTR_6g088885 | 30.682 | 440 | 270 | 19 | 41 | 462 | 40 | 462 | 4.88e-52 | 184 |
MS.gene26730.t1 | MTR_7g026340 | 30.254 | 433 | 266 | 19 | 31 | 443 | 26 | 442 | 2.03e-51 | 181 |
MS.gene26730.t1 | MTR_4g114850 | 34.706 | 340 | 202 | 12 | 20 | 349 | 18 | 347 | 4.29e-50 | 176 |
MS.gene26730.t1 | MTR_7g081370 | 36.311 | 347 | 195 | 11 | 1 | 345 | 1 | 323 | 4.58e-50 | 174 |
MS.gene26730.t1 | MTR_4g114850 | 34.706 | 340 | 202 | 12 | 20 | 349 | 18 | 347 | 6.58e-50 | 175 |
MS.gene26730.t1 | MTR_4g114850 | 34.706 | 340 | 202 | 12 | 20 | 349 | 18 | 347 | 7.29e-50 | 174 |
MS.gene26730.t1 | MTR_4g132280 | 28.375 | 437 | 279 | 14 | 31 | 451 | 48 | 466 | 2.81e-49 | 177 |
MS.gene26730.t1 | MTR_1g007810 | 34.969 | 326 | 191 | 13 | 27 | 343 | 15 | 328 | 4.69e-49 | 172 |
MS.gene26730.t1 | MTR_4g076430 | 34.211 | 342 | 205 | 12 | 7 | 345 | 2 | 326 | 2.69e-48 | 169 |
MS.gene26730.t1 | MTR_7g053500 | 32.570 | 393 | 230 | 18 | 81 | 451 | 2 | 381 | 2.80e-48 | 171 |
MS.gene26730.t1 | MTR_3g080410 | 33.724 | 341 | 209 | 11 | 21 | 352 | 20 | 352 | 5.64e-48 | 169 |
MS.gene26730.t1 | MTR_4g084480 | 31.722 | 331 | 209 | 12 | 27 | 349 | 31 | 352 | 3.09e-47 | 169 |
MS.gene26730.t1 | MTR_4g084480 | 31.722 | 331 | 209 | 12 | 27 | 349 | 24 | 345 | 4.30e-47 | 168 |
MS.gene26730.t1 | MTR_4g084480 | 31.722 | 331 | 209 | 12 | 27 | 349 | 31 | 352 | 4.48e-47 | 168 |
MS.gene26730.t1 | MTR_4g076470 | 32.268 | 313 | 196 | 8 | 32 | 343 | 27 | 324 | 4.59e-47 | 166 |
MS.gene26730.t1 | MTR_4g076500 | 32.817 | 323 | 200 | 10 | 29 | 347 | 80 | 389 | 5.01e-47 | 168 |
MS.gene26730.t1 | MTR_4g052970 | 29.787 | 376 | 230 | 15 | 26 | 391 | 27 | 378 | 8.81e-47 | 167 |
MS.gene26730.t1 | MTR_2g086530 | 32.051 | 390 | 228 | 19 | 7 | 381 | 5 | 372 | 9.95e-47 | 167 |
MS.gene26730.t1 | MTR_4g076440 | 32.558 | 344 | 210 | 13 | 6 | 345 | 1 | 326 | 1.19e-46 | 165 |
MS.gene26730.t1 | MTR_4g076255 | 34.091 | 308 | 183 | 10 | 43 | 347 | 40 | 330 | 1.63e-46 | 165 |
MS.gene26730.t1 | MTR_1g077990 | 35.312 | 337 | 196 | 14 | 21 | 348 | 24 | 347 | 1.90e-46 | 167 |
MS.gene26730.t1 | MTR_1g022160 | 32.099 | 324 | 205 | 9 | 28 | 343 | 24 | 340 | 5.39e-46 | 166 |
MS.gene26730.t1 | MTR_2g086530 | 32.609 | 368 | 214 | 18 | 26 | 381 | 6 | 351 | 6.61e-46 | 164 |
MS.gene26730.t1 | MTR_3g116510 | 33.851 | 322 | 189 | 13 | 138 | 443 | 1 | 314 | 9.11e-43 | 154 |
MS.gene26730.t1 | MTR_4g076490 | 29.863 | 365 | 220 | 11 | 6 | 349 | 56 | 405 | 1.91e-42 | 156 |
MS.gene26730.t1 | MTR_4g083500 | 26.237 | 465 | 299 | 16 | 18 | 451 | 34 | 485 | 2.15e-41 | 155 |
MS.gene26730.t1 | MTR_8g102340 | 30.435 | 368 | 233 | 13 | 96 | 451 | 62 | 418 | 3.09e-41 | 154 |
MS.gene26730.t1 | MTR_2g019345 | 30.836 | 347 | 218 | 15 | 8 | 343 | 2 | 337 | 5.18e-40 | 149 |
MS.gene26730.t1 | MTR_5g081720 | 28.477 | 302 | 198 | 10 | 49 | 343 | 58 | 348 | 8.35e-28 | 114 |
MS.gene26730.t1 | MTR_4g036680 | 33.019 | 106 | 66 | 3 | 242 | 346 | 75 | 176 | 8.12e-13 | 68.2 |
MS.gene26730.t1 | MTR_4g036775 | 33.019 | 106 | 66 | 3 | 242 | 346 | 75 | 176 | 2.36e-12 | 67.0 |
MS.gene26730.t1 | MTR_1g116870 | 40.909 | 88 | 46 | 4 | 366 | 451 | 276 | 359 | 1.10e-11 | 66.6 |
MS.gene26730.t1 | MTR_8g085440 | 38.889 | 90 | 49 | 4 | 364 | 451 | 30 | 115 | 7.22e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26730.t1 | AT5G20870 | 61.475 | 488 | 170 | 6 | 10 | 482 | 13 | 497 | 0.0 | 611 |
MS.gene26730.t1 | AT4G31140 | 56.067 | 478 | 203 | 3 | 6 | 483 | 7 | 477 | 0.0 | 534 |
MS.gene26730.t1 | AT5G58090 | 58.178 | 428 | 175 | 2 | 31 | 456 | 25 | 450 | 0.0 | 523 |
MS.gene26730.t1 | AT2G19440 | 54.378 | 434 | 188 | 6 | 27 | 455 | 20 | 448 | 5.71e-162 | 468 |
MS.gene26730.t1 | AT2G19440 | 54.378 | 434 | 188 | 6 | 27 | 455 | 20 | 448 | 5.71e-162 | 468 |
MS.gene26730.t1 | AT1G64760 | 53.917 | 434 | 190 | 6 | 27 | 455 | 24 | 452 | 7.98e-161 | 465 |
MS.gene26730.t1 | AT1G64760 | 53.917 | 434 | 190 | 6 | 27 | 455 | 24 | 452 | 7.98e-161 | 465 |
MS.gene26730.t1 | AT5G64790 | 51.025 | 439 | 209 | 4 | 20 | 455 | 20 | 455 | 5.64e-157 | 455 |
MS.gene26730.t1 | AT3G24330 | 49.781 | 456 | 218 | 7 | 9 | 458 | 21 | 471 | 1.88e-154 | 449 |
MS.gene26730.t1 | AT3G04010 | 50.670 | 448 | 208 | 6 | 13 | 455 | 22 | 461 | 3.57e-152 | 443 |
MS.gene26730.t1 | AT5G18220 | 49.458 | 461 | 218 | 8 | 4 | 455 | 5 | 459 | 4.26e-150 | 437 |
MS.gene26730.t1 | AT4G17180 | 48.344 | 453 | 216 | 8 | 10 | 458 | 10 | 448 | 2.39e-147 | 430 |
MS.gene26730.t1 | AT5G58480 | 42.694 | 438 | 244 | 5 | 31 | 467 | 29 | 460 | 1.84e-125 | 374 |
MS.gene26730.t1 | AT2G01630 | 32.874 | 435 | 262 | 17 | 31 | 451 | 26 | 444 | 6.11e-66 | 221 |
MS.gene26730.t1 | AT4G26830 | 32.543 | 464 | 271 | 18 | 10 | 451 | 8 | 451 | 1.01e-65 | 219 |
MS.gene26730.t1 | AT4G26830 | 32.957 | 443 | 256 | 18 | 31 | 451 | 32 | 455 | 1.94e-65 | 218 |
MS.gene26730.t1 | AT2G01630 | 32.787 | 427 | 259 | 16 | 31 | 443 | 26 | 438 | 1.99e-65 | 218 |
MS.gene26730.t1 | AT5G55180 | 31.900 | 442 | 265 | 18 | 31 | 451 | 30 | 456 | 4.06e-65 | 218 |
MS.gene26730.t1 | AT2G05790 | 32.026 | 459 | 268 | 17 | 24 | 451 | 23 | 468 | 9.28e-65 | 217 |
MS.gene26730.t1 | AT5G55180 | 31.954 | 435 | 262 | 17 | 30 | 443 | 29 | 450 | 8.80e-64 | 214 |
MS.gene26730.t1 | AT4G34480 | 33.784 | 444 | 272 | 14 | 10 | 443 | 10 | 441 | 9.92e-63 | 213 |
MS.gene26730.t1 | AT5G24318 | 30.501 | 459 | 280 | 21 | 13 | 452 | 18 | 456 | 1.95e-60 | 205 |
MS.gene26730.t1 | AT5G24318 | 30.667 | 450 | 275 | 20 | 13 | 443 | 18 | 449 | 1.66e-59 | 202 |
MS.gene26730.t1 | AT2G16230 | 30.977 | 481 | 299 | 17 | 31 | 492 | 28 | 494 | 1.16e-58 | 202 |
MS.gene26730.t1 | AT3G57270 | 37.942 | 311 | 181 | 8 | 39 | 347 | 39 | 339 | 3.17e-58 | 196 |
MS.gene26730.t1 | AT1G66250 | 31.278 | 454 | 286 | 14 | 28 | 470 | 32 | 470 | 1.30e-57 | 199 |
MS.gene26730.t1 | AT3G55430 | 33.182 | 440 | 253 | 21 | 31 | 451 | 32 | 449 | 1.54e-56 | 195 |
MS.gene26730.t1 | AT1G11820 | 29.638 | 442 | 275 | 15 | 26 | 451 | 44 | 465 | 1.83e-56 | 196 |
MS.gene26730.t1 | AT5G56590 | 29.978 | 447 | 281 | 16 | 39 | 469 | 38 | 468 | 1.41e-55 | 194 |
MS.gene26730.t1 | AT3G23770 | 31.757 | 444 | 268 | 19 | 31 | 451 | 40 | 471 | 3.39e-55 | 192 |
MS.gene26730.t1 | AT1G11820 | 29.263 | 434 | 273 | 14 | 26 | 443 | 44 | 459 | 3.50e-55 | 192 |
MS.gene26730.t1 | AT3G13560 | 32.553 | 427 | 259 | 16 | 31 | 443 | 29 | 440 | 6.24e-55 | 192 |
MS.gene26730.t1 | AT3G13560 | 32.553 | 427 | 259 | 16 | 31 | 443 | 29 | 440 | 6.24e-55 | 192 |
MS.gene26730.t1 | AT3G13560 | 32.553 | 427 | 259 | 16 | 31 | 443 | 29 | 440 | 6.24e-55 | 192 |
MS.gene26730.t1 | AT3G13560 | 32.553 | 427 | 259 | 16 | 31 | 443 | 29 | 440 | 6.24e-55 | 192 |
MS.gene26730.t1 | AT3G13560 | 32.553 | 427 | 259 | 16 | 31 | 443 | 29 | 440 | 6.24e-55 | 192 |
MS.gene26730.t1 | AT3G07320 | 32.311 | 424 | 258 | 18 | 46 | 451 | 43 | 455 | 6.77e-54 | 188 |
MS.gene26730.t1 | AT4G16260 | 35.556 | 315 | 189 | 9 | 40 | 351 | 6 | 309 | 1.71e-52 | 180 |
MS.gene26730.t1 | AT4G16260 | 35.556 | 315 | 189 | 9 | 40 | 351 | 35 | 338 | 2.22e-52 | 181 |
MS.gene26730.t1 | AT4G14080 | 31.754 | 422 | 261 | 15 | 39 | 442 | 54 | 466 | 3.36e-52 | 184 |
MS.gene26730.t1 | AT2G01630 | 33.531 | 337 | 204 | 12 | 30 | 355 | 25 | 352 | 1.67e-51 | 180 |
MS.gene26730.t1 | AT3G57260 | 35.691 | 311 | 182 | 11 | 39 | 347 | 44 | 338 | 2.28e-51 | 178 |
MS.gene26730.t1 | AT3G57260 | 35.691 | 311 | 182 | 11 | 39 | 347 | 60 | 354 | 2.93e-51 | 178 |
MS.gene26730.t1 | AT4G34480 | 35.328 | 351 | 209 | 11 | 10 | 352 | 10 | 350 | 6.23e-51 | 177 |
MS.gene26730.t1 | AT3G15800 | 33.526 | 346 | 214 | 11 | 16 | 352 | 30 | 368 | 1.65e-50 | 177 |
MS.gene26730.t1 | AT1G32860 | 33.616 | 354 | 212 | 15 | 3 | 345 | 6 | 347 | 2.34e-50 | 177 |
MS.gene26730.t1 | AT2G27500 | 34.441 | 331 | 201 | 11 | 27 | 349 | 28 | 350 | 2.08e-49 | 174 |
MS.gene26730.t1 | AT2G27500 | 34.441 | 331 | 201 | 11 | 27 | 349 | 28 | 350 | 4.81e-49 | 173 |
MS.gene26730.t1 | AT4G29360 | 28.160 | 451 | 276 | 14 | 39 | 453 | 39 | 477 | 2.21e-48 | 175 |
MS.gene26730.t1 | AT4G29360 | 28.074 | 488 | 295 | 16 | 10 | 453 | 12 | 487 | 2.50e-48 | 175 |
MS.gene26730.t1 | AT2G39640 | 30.508 | 472 | 287 | 21 | 10 | 466 | 12 | 457 | 4.28e-48 | 174 |
MS.gene26730.t1 | AT5G24318 | 32.153 | 339 | 208 | 15 | 13 | 343 | 18 | 342 | 2.71e-47 | 168 |
MS.gene26730.t1 | AT2G26600 | 33.134 | 335 | 204 | 12 | 28 | 352 | 34 | 358 | 1.27e-46 | 167 |
MS.gene26730.t1 | AT1G30080 | 29.014 | 355 | 229 | 12 | 3 | 343 | 5 | 350 | 2.45e-44 | 160 |
MS.gene26730.t1 | AT1G77780 | 33.887 | 301 | 183 | 11 | 39 | 336 | 36 | 323 | 3.21e-44 | 159 |
MS.gene26730.t1 | AT1G30080 | 29.014 | 355 | 229 | 12 | 3 | 343 | 5 | 350 | 4.21e-44 | 160 |
MS.gene26730.t1 | AT1G77790 | 32.565 | 347 | 216 | 11 | 5 | 345 | 7 | 341 | 5.52e-44 | 158 |
MS.gene26730.t1 | AT4G34480 | 33.929 | 336 | 204 | 12 | 118 | 443 | 3 | 330 | 6.03e-44 | 159 |
MS.gene26730.t1 | AT4G18340 | 30.084 | 359 | 225 | 15 | 3 | 348 | 6 | 351 | 3.55e-43 | 157 |
MS.gene26730.t1 | AT4G18340 | 30.084 | 359 | 225 | 15 | 3 | 348 | 6 | 351 | 6.43e-43 | 157 |
MS.gene26730.t1 | AT5G42720 | 31.909 | 351 | 220 | 12 | 6 | 347 | 6 | 346 | 1.42e-42 | 157 |
MS.gene26730.t1 | AT3G61810 | 31.487 | 343 | 208 | 13 | 18 | 348 | 45 | 372 | 2.01e-42 | 155 |
MS.gene26730.t1 | AT3G57240 | 32.476 | 311 | 188 | 10 | 41 | 347 | 48 | 340 | 6.25e-42 | 153 |
MS.gene26730.t1 | AT5G42100 | 30.814 | 344 | 218 | 13 | 14 | 347 | 15 | 348 | 1.54e-41 | 154 |
MS.gene26730.t1 | AT5G42100 | 30.814 | 344 | 218 | 13 | 14 | 347 | 15 | 348 | 2.08e-41 | 153 |
MS.gene26730.t1 | AT1G11820 | 29.641 | 334 | 217 | 10 | 26 | 350 | 44 | 368 | 3.12e-40 | 149 |
MS.gene26730.t1 | AT1G33220 | 29.321 | 324 | 214 | 10 | 3 | 321 | 9 | 322 | 1.19e-39 | 146 |
MS.gene26730.t1 | AT5G20390 | 29.499 | 339 | 216 | 10 | 9 | 336 | 7 | 333 | 1.75e-39 | 146 |
MS.gene26730.t1 | AT2G27500 | 34.050 | 279 | 170 | 9 | 78 | 349 | 1 | 272 | 1.00e-38 | 143 |
MS.gene26730.t1 | AT5G24318 | 30.000 | 330 | 200 | 14 | 141 | 452 | 1 | 317 | 1.26e-38 | 143 |
MS.gene26730.t1 | AT5G20560 | 29.560 | 318 | 195 | 10 | 30 | 336 | 36 | 335 | 1.46e-37 | 141 |
MS.gene26730.t1 | AT5G20330 | 28.319 | 339 | 225 | 11 | 3 | 336 | 9 | 334 | 7.39e-36 | 136 |
MS.gene26730.t1 | AT5G20340 | 29.841 | 315 | 197 | 13 | 30 | 336 | 45 | 343 | 1.40e-35 | 136 |
MS.gene26730.t1 | AT2G26600 | 34.066 | 273 | 162 | 10 | 89 | 352 | 1 | 264 | 1.03e-34 | 132 |
MS.gene26730.t1 | AT3G46570 | 30.029 | 343 | 217 | 13 | 10 | 343 | 12 | 340 | 2.36e-32 | 127 |
MS.gene26730.t1 | AT3G55780 | 25.857 | 321 | 217 | 10 | 41 | 351 | 49 | 358 | 3.34e-26 | 110 |
Find 106 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAAATTCTTTAGGGAAATT+AGG | 0.162535 | 8.2:+8861675 | None:intergenic |
TCAAAGAAAGCAAATTCTTT+AGG | 0.203190 | 8.2:+8861666 | None:intergenic |
CTCATACTTTGTGCAAAATT+AGG | 0.205482 | 8.2:+8861189 | None:intergenic |
AAAGAATTTGCTTTCTTTGA+TGG | 0.208174 | 8.2:-8861663 | MS.gene26730:CDS |
CCCTTGGCTTTGCTTGCAAT+TGG | 0.238585 | 8.2:-8862633 | MS.gene26730:CDS |
TTTGAGATCATGATTGATAT+TGG | 0.242623 | 8.2:-8860970 | MS.gene26730:CDS |
ATGTAAGAGGGCCGTTATTT+TGG | 0.244858 | 8.2:+8861733 | None:intergenic |
CTGAAGGCTCTTGGGAATTC+TGG | 0.246366 | 8.2:-8862508 | MS.gene26730:CDS |
TCTTGGGAATTCTGGCATTC+AGG | 0.280623 | 8.2:-8862500 | MS.gene26730:CDS |
ATGAAATACCCTTTGAATCT+TGG | 0.284657 | 8.2:-8861300 | MS.gene26730:CDS |
CAAAGAAAGCAAATTCTTTA+GGG | 0.289026 | 8.2:+8861667 | None:intergenic |
CCTTGGCTTTGCTTGCAATT+GGG | 0.291854 | 8.2:-8862632 | MS.gene26730:CDS |
AGGGCAAACATGTAAATTTC+AGG | 0.292702 | 8.2:+8861399 | None:intergenic |
GAAATAACACACCATTGTTT+TGG | 0.299535 | 8.2:+8861234 | None:intergenic |
GAATTCTGGCATTCAGGTTA+TGG | 0.301145 | 8.2:-8862494 | MS.gene26730:CDS |
TGGTAGACATCAGCATTTAA+AGG | 0.322180 | 8.2:+8861837 | None:intergenic |
ATTTGATTATTGACATCATT+TGG | 0.333649 | 8.2:+8861763 | None:intergenic |
TCTGCTGCCCCTGTAGTTGA+TGG | 0.360256 | 8.2:-8861639 | MS.gene26730:CDS |
ATATGAAGGCGGAAACATTT+TGG | 0.364501 | 8.2:+8862404 | None:intergenic |
GGTAGACATCAGCATTTAAA+GGG | 0.366946 | 8.2:+8861838 | None:intergenic |
TTGAGATCATGATTGATATT+GGG | 0.371941 | 8.2:-8860969 | MS.gene26730:CDS |
TCCTCTTCCAGCTCAAATAA+TGG | 0.373231 | 8.2:-8862593 | MS.gene26730:CDS |
TTGTATACTAAGCCAAAGTT+TGG | 0.391479 | 8.2:-8862665 | MS.gene26730:CDS |
ATTCCCCAATGTCTCTCAAA+TGG | 0.397966 | 8.2:+8861342 | None:intergenic |
CCCATGGCACTGAAGGCTCT+TGG | 0.409961 | 8.2:-8862517 | MS.gene26730:CDS |
CTTGGCTTTGCTTGCAATTG+GGG | 0.413284 | 8.2:-8862631 | MS.gene26730:CDS |
AAATCACTAGTTGGTGCTAA+AGG | 0.413423 | 8.2:-8861270 | MS.gene26730:CDS |
AGCTTCACCATTATTTGAGC+TGG | 0.418137 | 8.2:+8862586 | None:intergenic |
CCATGGCACTGAAGGCTCTT+GGG | 0.419662 | 8.2:-8862516 | MS.gene26730:CDS |
AATCACTAGTTGGTGCTAAA+GGG | 0.420833 | 8.2:-8861269 | MS.gene26730:CDS |
TGGCCCATTTGAGAGACATT+GGG | 0.432301 | 8.2:-8861346 | MS.gene26730:CDS |
AAAGATGCATGTCAATTCAA+TGG | 0.443198 | 8.2:-8861045 | MS.gene26730:CDS |
TTCATCTCAAGCAAATGTAA+TGG | 0.443401 | 8.2:-8861214 | MS.gene26730:CDS |
GGGTAGATGTTAAATGTAAG+AGG | 0.443692 | 8.2:+8861720 | None:intergenic |
TAATATGTATTATCAAAGAA+TGG | 0.448941 | 8.2:-8861076 | MS.gene26730:CDS |
TGGCATACCCAATGACCTCT+TGG | 0.450780 | 8.2:-8862470 | MS.gene26730:CDS |
AATGTTATCATTGGTGAAGT+TGG | 0.454844 | 8.2:-8861534 | MS.gene26730:CDS |
GCATTTGATGTTCCATCAGT+TGG | 0.457755 | 8.2:+8861507 | None:intergenic |
AGCTGATCCCATGGCACTGA+AGG | 0.462871 | 8.2:-8862524 | MS.gene26730:CDS |
CAAGCAGCCCTTATAAAAGC+AGG | 0.466267 | 8.2:-8861888 | MS.gene26730:CDS |
GGTTCAATGAATGTTATCAT+TGG | 0.468945 | 8.2:-8861543 | MS.gene26730:CDS |
AAGTGAATCCAAGAGGTCAT+TGG | 0.477036 | 8.2:+8862462 | None:intergenic |
AGTGAATCCAAGAGGTCATT+GGG | 0.485799 | 8.2:+8862463 | None:intergenic |
CTGGCCCATTTGAGAGACAT+TGG | 0.488422 | 8.2:-8861347 | MS.gene26730:CDS |
TCAGCATCAAGGCTTAGAAA+AGG | 0.491244 | 8.2:+8861699 | None:intergenic |
AGTTTGGCAAAAGGTACCCT+TGG | 0.491787 | 8.2:-8862649 | MS.gene26730:CDS |
TTCCCCAATGTCTCTCAAAT+GGG | 0.492714 | 8.2:+8861343 | None:intergenic |
ACCATTATTTGAGCTGGAAG+AGG | 0.496228 | 8.2:+8862592 | None:intergenic |
CCCAAGAGCCTTCAGTGCCA+TGG | 0.497598 | 8.2:+8862516 | None:intergenic |
GCTCCTGGCTCTTCTTGTAG+TGG | 0.498871 | 8.2:-8861132 | MS.gene26730:CDS |
GATTGTACATCTCTTGCTCC+TGG | 0.501491 | 8.2:-8861147 | MS.gene26730:CDS |
AAATTTCTTAGCCAAAATAA+CGG | 0.503273 | 8.2:-8861744 | MS.gene26730:CDS |
AGTGACACTGGTCTTCCATC+AGG | 0.505930 | 8.2:-8861813 | MS.gene26730:CDS |
GATATGGAACCATCAACTAC+AGG | 0.506108 | 8.2:+8861630 | None:intergenic |
TACCCTTTGAATCTTGGTGG+TGG | 0.509344 | 8.2:-8861294 | MS.gene26730:CDS |
CAATGTCTCTCAAATGGGCC+AGG | 0.515554 | 8.2:+8861348 | None:intergenic |
GCCCTTATAAAAGCAGGGTT+AGG | 0.517583 | 8.2:-8861882 | MS.gene26730:CDS |
TTTCCACCACCAAGATTCAA+AGG | 0.519584 | 8.2:+8861291 | None:intergenic |
TCTGGCATTCAGGTTATGGT+TGG | 0.523834 | 8.2:-8862490 | MS.gene26730:CDS |
ATTCCCAGGTATGTTGCTGT+TGG | 0.524304 | 8.2:-8861981 | MS.gene26730:intron |
GGAAATTAGGATCAGCATCA+AGG | 0.525105 | 8.2:+8861688 | None:intergenic |
ATGGAAGACCAGTGTCACTT+TGG | 0.528047 | 8.2:+8861817 | None:intergenic |
CTAAGCCAAAGTTTGGCAAA+AGG | 0.528146 | 8.2:-8862658 | MS.gene26730:CDS |
AAAAGCACGTACTAAAACGT+TGG | 0.532946 | 8.2:+8862698 | None:intergenic |
TGTAGTGGTTTAGACACAAA+GGG | 0.535458 | 8.2:-8861117 | MS.gene26730:CDS |
CAGCATCAAGGCTTAGAAAA+GGG | 0.536287 | 8.2:+8861700 | None:intergenic |
CCCAATTGCAAGCAAAGCCA+AGG | 0.538896 | 8.2:+8862632 | None:intergenic |
ATGTAAATTTCAGGTGGGGT+AGG | 0.542978 | 8.2:+8861408 | None:intergenic |
AGAGTACATAATGGTCATGC+TGG | 0.544525 | 8.2:-8860899 | MS.gene26730:CDS |
CCAAGAGCCTTCAGTGCCAT+GGG | 0.544609 | 8.2:+8862517 | None:intergenic |
AATTGGATTAGAGTACATAA+TGG | 0.544687 | 8.2:-8860908 | MS.gene26730:CDS |
AGACTATACAAATAGAGATA+AGG | 0.546510 | 8.2:+8860858 | None:intergenic |
TTCCACCACCAAGATTCAAA+GGG | 0.549004 | 8.2:+8861292 | None:intergenic |
GGTCTAAAGTGTCCACCTGA+TGG | 0.549481 | 8.2:+8861798 | None:intergenic |
TGCAATAGCAGCATTGACAT+TGG | 0.551848 | 8.2:+8862435 | None:intergenic |
AGTGCTCAAAGATTTAATCA+AGG | 0.558025 | 8.2:-8861474 | MS.gene26730:CDS |
TTAAATATTTGCCAAAACAA+TGG | 0.559751 | 8.2:-8861245 | MS.gene26730:CDS |
AGAAGGTGAAGGATCAATGT+TGG | 0.571619 | 8.2:+8861008 | None:intergenic |
ATGTCAATGCTGCTATTGCA+TGG | 0.571781 | 8.2:-8862432 | MS.gene26730:CDS |
ATCACTAGTTGGTGCTAAAG+GGG | 0.581029 | 8.2:-8861268 | MS.gene26730:CDS |
AAATACCCTTTGAATCTTGG+TGG | 0.581742 | 8.2:-8861297 | MS.gene26730:CDS |
ATTGATCCTTCACCTTCTCA+AGG | 0.584331 | 8.2:-8861003 | MS.gene26730:CDS |
GTGAAGCTTATGAAAGACAA+TGG | 0.584491 | 8.2:-8862571 | MS.gene26730:CDS |
ATATGGAACCATCAACTACA+GGG | 0.586294 | 8.2:+8861631 | None:intergenic |
TTGTAGTGGTTTAGACACAA+AGG | 0.587590 | 8.2:-8861118 | MS.gene26730:CDS |
GCAAACATGTAAATTTCAGG+TGG | 0.588739 | 8.2:+8861402 | None:intergenic |
GGTGGTGGAAAATCACTAGT+TGG | 0.601318 | 8.2:-8861279 | MS.gene26730:CDS |
CAATGCTGCTATTGCATGGG+TGG | 0.601494 | 8.2:-8862428 | MS.gene26730:CDS |
TTATCATTGGTGAAGTTGGT+TGG | 0.606188 | 8.2:-8861530 | MS.gene26730:CDS |
CAAACATGTAAATTTCAGGT+GGG | 0.606459 | 8.2:+8861403 | None:intergenic |
GGTAGATGTTAAATGTAAGA+GGG | 0.611599 | 8.2:+8861721 | None:intergenic |
AAATGACAACTACCTTGAGA+AGG | 0.612080 | 8.2:+8860991 | None:intergenic |
GATGTCTACCAAAGTGACAC+TGG | 0.613469 | 8.2:-8861825 | MS.gene26730:CDS |
AAACCACTACAAGAAGAGCC+AGG | 0.623694 | 8.2:+8861129 | None:intergenic |
AAGCAGCCCTTATAAAAGCA+GGG | 0.628845 | 8.2:-8861887 | MS.gene26730:CDS |
GAAGTTGGTTGGCCAACTGA+TGG | 0.629204 | 8.2:-8861519 | MS.gene26730:CDS |
GGCCCATTTGAGAGACATTG+GGG | 0.629502 | 8.2:-8861345 | MS.gene26730:CDS |
AAACATGTAAATTTCAGGTG+GGG | 0.634074 | 8.2:+8861404 | None:intergenic |
TGTCAATGCTGCTATTGCAT+GGG | 0.635182 | 8.2:-8862431 | MS.gene26730:CDS |
GACACTGGTCTTCCATCAGG+TGG | 0.637692 | 8.2:-8861810 | MS.gene26730:CDS |
GTTGTTTGAAGCTGATCCCA+TGG | 0.646484 | 8.2:-8862533 | MS.gene26730:CDS |
GTAGACATCAGCATTTAAAG+GGG | 0.650986 | 8.2:+8861839 | None:intergenic |
CAACTACCTTGAGAAGGTGA+AGG | 0.652284 | 8.2:+8860997 | None:intergenic |
CCAATTGCAAGCAAAGCCAA+GGG | 0.668441 | 8.2:+8862633 | None:intergenic |
TGGAAGCAAGTGAATCCAAG+AGG | 0.710711 | 8.2:+8862455 | None:intergenic |
TATGGAACCATCAACTACAG+GGG | 0.718530 | 8.2:+8861632 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATATGTATTATCAAAGAA+TGG | - | chr8.2:8862491-8862510 | MS.gene26730:CDS | 15.0% |
!!! | AAGTAACATTAATGTTTTAT+TGG | - | chr8.2:8861412-8861431 | MS.gene26730:CDS | 15.0% |
!! | AAAATTTGCATCAAAAACAT+TGG | + | chr8.2:8861968-8861987 | None:intergenic | 20.0% |
!! | AAATTTCTTAGCCAAAATAA+CGG | - | chr8.2:8861823-8861842 | MS.gene26730:CDS | 20.0% |
!! | ATTTGATTATTGACATCATT+TGG | + | chr8.2:8861807-8861826 | None:intergenic | 20.0% |
!! | GAATTAATTGTACAAAACAT+TGG | + | chr8.2:8861570-8861589 | None:intergenic | 20.0% |
!! | TGATTTGACACAAAAAATTA+GGG | - | chr8.2:8861255-8861274 | MS.gene26730:CDS | 20.0% |
!! | TTAAATATTTGCCAAAACAA+TGG | - | chr8.2:8862322-8862341 | MS.gene26730:intron | 20.0% |
!!! | TTGATTTGACACAAAAAATT+AGG | - | chr8.2:8861254-8861273 | MS.gene26730:CDS | 20.0% |
!!! | TTTTAAATCCTCATCTAAAA+GGG | + | chr8.2:8862190-8862209 | None:intergenic | 20.0% |
!!! | TTTTTAAATCCTCATCTAAA+AGG | + | chr8.2:8862191-8862210 | None:intergenic | 20.0% |
! | AAAAACATTGGTGTAAGATA+TGG | + | chr8.2:8861956-8861975 | None:intergenic | 25.0% |
! | AAACGACTTATAATTTGAGA+CGG | - | chr8.2:8861482-8861501 | MS.gene26730:CDS | 25.0% |
! | ATTTCAGCTCTTGAAAAAAA+TGG | - | chr8.2:8861997-8862016 | MS.gene26730:intron | 25.0% |
! | CAAAGAAAGCAAATTCTTTA+GGG | + | chr8.2:8861903-8861922 | None:intergenic | 25.0% |
! | TCAAAGAAAGCAAATTCTTT+AGG | + | chr8.2:8861904-8861923 | None:intergenic | 25.0% |
! | TTGAGATCATGATTGATATT+GGG | - | chr8.2:8862598-8862617 | MS.gene26730:CDS | 25.0% |
!! | AAAGAATTTGCTTTCTTTGA+TGG | - | chr8.2:8861904-8861923 | MS.gene26730:CDS | 25.0% |
!! | AATTGGATTAGAGTACATAA+TGG | - | chr8.2:8862659-8862678 | MS.gene26730:CDS | 25.0% |
!! | ATGTACTCTAATCCAATTTT+TGG | + | chr8.2:8862657-8862676 | None:intergenic | 25.0% |
!! | TTTGAGATCATGATTGATAT+TGG | - | chr8.2:8862597-8862616 | MS.gene26730:CDS | 25.0% |
!!! | GATTTAAAAAGTATTGATCC+TGG | - | chr8.2:8862201-8862220 | MS.gene26730:intron | 25.0% |
!!! | GCTTTTCTAAAAACATACAA+TGG | - | chr8.2:8861616-8861635 | MS.gene26730:CDS | 25.0% |
AAAGATGCATGTCAATTCAA+TGG | - | chr8.2:8862522-8862541 | MS.gene26730:CDS | 30.0% | |
AATGTTATCATTGGTGAAGT+TGG | - | chr8.2:8862033-8862052 | MS.gene26730:intron | 30.0% | |
AGTGCTCAAAGATTTAATCA+AGG | - | chr8.2:8862093-8862112 | MS.gene26730:intron | 30.0% | |
ATAAGGATAATAATCTCACG+TGG | - | chr8.2:8861519-8861538 | MS.gene26730:CDS | 30.0% | |
ATGAAATACCCTTTGAATCT+TGG | - | chr8.2:8862267-8862286 | MS.gene26730:intron | 30.0% | |
CTCATACTTTGTGCAAAATT+AGG | + | chr8.2:8862381-8862400 | None:intergenic | 30.0% | |
GATAGAATAGTGAAAAAGCA+AGG | - | chr8.2:8862123-8862142 | MS.gene26730:intron | 30.0% | |
GGTAGATGTTAAATGTAAGA+GGG | + | chr8.2:8861849-8861868 | None:intergenic | 30.0% | |
GGTTCAATGAATGTTATCAT+TGG | - | chr8.2:8862024-8862043 | MS.gene26730:intron | 30.0% | |
TTCATCTCAAGCAAATGTAA+TGG | - | chr8.2:8862353-8862372 | MS.gene26730:intron | 30.0% | |
TTGTATACTAAGCCAAAGTT+TGG | - | chr8.2:8860902-8860921 | MS.gene26730:CDS | 30.0% | |
! | AAACATGTAAATTTCAGGTG+GGG | + | chr8.2:8862166-8862185 | None:intergenic | 30.0% |
! | ACTTATAATTTGAGACGGAT+GGG | - | chr8.2:8861487-8861506 | MS.gene26730:CDS | 30.0% |
! | CAAACATGTAAATTTCAGGT+GGG | + | chr8.2:8862167-8862186 | None:intergenic | 30.0% |
! | GAAATAACACACCATTGTTT+TGG | + | chr8.2:8862336-8862355 | None:intergenic | 30.0% |
! | GCAAATTCTTTAGGGAAATT+AGG | + | chr8.2:8861895-8861914 | None:intergenic | 30.0% |
! | GCTCTTGAAAAAAATGGTTT+TGG | - | chr8.2:8862003-8862022 | MS.gene26730:intron | 30.0% |
! | GTTTTGTACAATTAATTCCC+AGG | - | chr8.2:8861572-8861591 | MS.gene26730:CDS | 30.0% |
! | TGGGGAATTTTCAATTTTGA+TGG | - | chr8.2:8862240-8862259 | MS.gene26730:intron | 30.0% |
!! | AACCCCATTTTTAGATATGA+AGG | + | chr8.2:8861180-8861199 | None:intergenic | 30.0% |
!! | CTAAAAATGGGGTTGATATA+AGG | - | chr8.2:8861186-8861205 | MS.gene26730:CDS | 30.0% |
!! | TTTTAGTACGTGCTTTTTGT+TGG | - | chr8.2:8860875-8860894 | MS.gene26730:CDS | 30.0% |
!!! | ATCATTTGGTTTTGAATGTC+TGG | + | chr8.2:8861793-8861812 | None:intergenic | 30.0% |
AAATACCCTTTGAATCTTGG+TGG | - | chr8.2:8862270-8862289 | MS.gene26730:intron | 35.0% | |
AAATGACAACTACCTTGAGA+AGG | + | chr8.2:8862579-8862598 | None:intergenic | 35.0% | |
AGGGCAAACATGTAAATTTC+AGG | + | chr8.2:8862171-8862190 | None:intergenic | 35.0% | |
ATATGGAACCATCAACTACA+GGG | + | chr8.2:8861939-8861958 | None:intergenic | 35.0% | |
CCGCCTTCATATCTAAAAAT+GGG | - | chr8.2:8861174-8861193 | MS.gene26730:CDS | 35.0% | |
CGCCTTCATATCTAAAAATG+GGG | - | chr8.2:8861175-8861194 | MS.gene26730:CDS | 35.0% | |
GCAAACATGTAAATTTCAGG+TGG | + | chr8.2:8862168-8862187 | None:intergenic | 35.0% | |
GGGTAGATGTTAAATGTAAG+AGG | + | chr8.2:8861850-8861869 | None:intergenic | 35.0% | |
GGTAGACATCAGCATTTAAA+GGG | + | chr8.2:8861732-8861751 | None:intergenic | 35.0% | |
GTAGACATCAGCATTTAAAG+GGG | + | chr8.2:8861731-8861750 | None:intergenic | 35.0% | |
GTGAAGCTTATGAAAGACAA+TGG | - | chr8.2:8860996-8861015 | MS.gene26730:CDS | 35.0% | |
TCCGCCTTCATATCTAAAAA+TGG | - | chr8.2:8861173-8861192 | MS.gene26730:CDS | 35.0% | |
TGACCAAGGTAGTAATGAAA+AGG | + | chr8.2:8861233-8861252 | None:intergenic | 35.0% | |
TGGTAGACATCAGCATTTAA+AGG | + | chr8.2:8861733-8861752 | None:intergenic | 35.0% | |
TGTAGTGGTTTAGACACAAA+GGG | - | chr8.2:8862450-8862469 | MS.gene26730:CDS | 35.0% | |
TTGTAGTGGTTTAGACACAA+AGG | - | chr8.2:8862449-8862468 | MS.gene26730:CDS | 35.0% | |
! | AAAAGCACGTACTAAAACGT+TGG | + | chr8.2:8860872-8860891 | None:intergenic | 35.0% |
! | ATATGAAGGCGGAAACATTT+TGG | + | chr8.2:8861166-8861185 | None:intergenic | 35.0% |
! | CTTATAATTTGAGACGGATG+GGG | - | chr8.2:8861488-8861507 | MS.gene26730:CDS | 35.0% |
! | GACTTATAATTTGAGACGGA+TGG | - | chr8.2:8861486-8861505 | MS.gene26730:CDS | 35.0% |
! | TCTTTTGCTGCACCAAAAAT+TGG | - | chr8.2:8862642-8862661 | MS.gene26730:CDS | 35.0% |
! | TTATCATTGGTGAAGTTGGT+TGG | - | chr8.2:8862037-8862056 | MS.gene26730:intron | 35.0% |
!! | AAATCACTAGTTGGTGCTAA+AGG | - | chr8.2:8862297-8862316 | MS.gene26730:intron | 35.0% |
!! | AATCACTAGTTGGTGCTAAA+GGG | - | chr8.2:8862298-8862317 | MS.gene26730:intron | 35.0% |
!! | CCCATTTTTAGATATGAAGG+CGG | + | chr8.2:8861177-8861196 | None:intergenic | 35.0% |
!!! | GCTTGAATGTTTTTTATGGC+TGG | + | chr8.2:8861664-8861683 | None:intergenic | 35.0% |
!!! | GGCTGCTTGAATGTTTTTTA+TGG | + | chr8.2:8861668-8861687 | None:intergenic | 35.0% |
AAGCAGCCCTTATAAAAGCA+GGG | - | chr8.2:8861680-8861699 | MS.gene26730:CDS | 40.0% | |
AAGTGAATCCAAGAGGTCAT+TGG | + | chr8.2:8861108-8861127 | None:intergenic | 40.0% | |
ACCATTATTTGAGCTGGAAG+AGG | + | chr8.2:8860978-8860997 | None:intergenic | 40.0% | |
AGAAGGTGAAGGATCAATGT+TGG | + | chr8.2:8862562-8862581 | None:intergenic | 40.0% | |
AGAGTACATAATGGTCATGC+TGG | - | chr8.2:8862668-8862687 | MS.gene26730:CDS | 40.0% | |
AGCTTCACCATTATTTGAGC+TGG | + | chr8.2:8860984-8861003 | None:intergenic | 40.0% | |
AGTGAATCCAAGAGGTCATT+GGG | + | chr8.2:8861107-8861126 | None:intergenic | 40.0% | |
ATGTCAATGCTGCTATTGCA+TGG | - | chr8.2:8861135-8861154 | MS.gene26730:CDS | 40.0% | |
ATTACCAACAGCAACATACC+TGG | + | chr8.2:8861593-8861612 | None:intergenic | 40.0% | |
ATTCCCCAATGTCTCTCAAA+TGG | + | chr8.2:8862228-8862247 | None:intergenic | 40.0% | |
ATTGATCCTTCACCTTCTCA+AGG | - | chr8.2:8862564-8862583 | MS.gene26730:CDS | 40.0% | |
CAGCATCAAGGCTTAGAAAA+GGG | + | chr8.2:8861870-8861889 | None:intergenic | 40.0% | |
CCAAGGTAGTAATGAAAAGG+AGG | + | chr8.2:8861230-8861249 | None:intergenic | 40.0% | |
CTAAGCCAAAGTTTGGCAAA+AGG | - | chr8.2:8860909-8860928 | MS.gene26730:CDS | 40.0% | |
GATATGGAACCATCAACTAC+AGG | + | chr8.2:8861940-8861959 | None:intergenic | 40.0% | |
GCATTTGATGTTCCATCAGT+TGG | + | chr8.2:8862063-8862082 | None:intergenic | 40.0% | |
GGAAATTAGGATCAGCATCA+AGG | + | chr8.2:8861882-8861901 | None:intergenic | 40.0% | |
TATGGAACCATCAACTACAG+GGG | + | chr8.2:8861938-8861957 | None:intergenic | 40.0% | |
TCAGCATCAAGGCTTAGAAA+AGG | + | chr8.2:8861871-8861890 | None:intergenic | 40.0% | |
TCCTCTTCCAGCTCAAATAA+TGG | - | chr8.2:8860974-8860993 | MS.gene26730:CDS | 40.0% | |
TGTCAATGCTGCTATTGCAT+GGG | - | chr8.2:8861136-8861155 | MS.gene26730:CDS | 40.0% | |
TGTGTCAAATCAAGTGACCA+AGG | + | chr8.2:8861247-8861266 | None:intergenic | 40.0% | |
TTACCAACAGCAACATACCT+GGG | + | chr8.2:8861592-8861611 | None:intergenic | 40.0% | |
TTCCACCACCAAGATTCAAA+GGG | + | chr8.2:8862278-8862297 | None:intergenic | 40.0% | |
TTCCCCAATGTCTCTCAAAT+GGG | + | chr8.2:8862227-8862246 | None:intergenic | 40.0% | |
TTTCCACCACCAAGATTCAA+AGG | + | chr8.2:8862279-8862298 | None:intergenic | 40.0% | |
! | ATGTAAATTTCAGGTGGGGT+AGG | + | chr8.2:8862162-8862181 | None:intergenic | 40.0% |
! | ATGTAAGAGGGCCGTTATTT+TGG | + | chr8.2:8861837-8861856 | None:intergenic | 40.0% |
! | CATGTTTGCCCTTTTAGATG+AGG | - | chr8.2:8862179-8862198 | MS.gene26730:intron | 40.0% |
! | CCTCCTTTTCATTACTACCT+TGG | - | chr8.2:8861227-8861246 | MS.gene26730:CDS | 40.0% |
! | CGGATGGGGTACTTATTATA+AGG | - | chr8.2:8861502-8861521 | MS.gene26730:CDS | 40.0% |
! | GAATTCTGGCATTCAGGTTA+TGG | - | chr8.2:8861073-8861092 | MS.gene26730:CDS | 40.0% |
!! | ATCACTAGTTGGTGCTAAAG+GGG | - | chr8.2:8862299-8862318 | MS.gene26730:intron | 40.0% |
!! | GCCTAACCCTGCTTTTATAA+GGG | + | chr8.2:8861689-8861708 | None:intergenic | 40.0% |
!! | TGCAATAGCAGCATTGACAT+TGG | + | chr8.2:8861135-8861154 | None:intergenic | 40.0% |
!! | TGCCTAACCCTGCTTTTATA+AGG | + | chr8.2:8861690-8861709 | None:intergenic | 40.0% |
!! | TTTTGGTGCAGCAAAAGAAG+TGG | + | chr8.2:8862640-8862659 | None:intergenic | 40.0% |
AAACCACTACAAGAAGAGCC+AGG | + | chr8.2:8862441-8862460 | None:intergenic | 45.0% | |
ATTCCCAGGTATGTTGCTGT+TGG | - | chr8.2:8861586-8861605 | MS.gene26730:CDS | 45.0% | |
CAACTACCTTGAGAAGGTGA+AGG | + | chr8.2:8862573-8862592 | None:intergenic | 45.0% | |
CAAGCAGCCCTTATAAAAGC+AGG | - | chr8.2:8861679-8861698 | MS.gene26730:CDS | 45.0% | |
CCAATTGCAAGCAAAGCCAA+GGG | + | chr8.2:8860937-8860956 | None:intergenic | 45.0% | |
GATGTCTACCAAAGTGACAC+TGG | - | chr8.2:8861742-8861761 | MS.gene26730:CDS | 45.0% | |
GATTGTACATCTCTTGCTCC+TGG | - | chr8.2:8862420-8862439 | MS.gene26730:CDS | 45.0% | |
GCCCTTATAAAAGCAGGGTT+AGG | - | chr8.2:8861685-8861704 | MS.gene26730:CDS | 45.0% | |
TACCCTTTGAATCTTGGTGG+TGG | - | chr8.2:8862273-8862292 | MS.gene26730:intron | 45.0% | |
TCTTGGGAATTCTGGCATTC+AGG | - | chr8.2:8861067-8861086 | MS.gene26730:CDS | 45.0% | |
TGGAAGCAAGTGAATCCAAG+AGG | + | chr8.2:8861115-8861134 | None:intergenic | 45.0% | |
TGGCCCATTTGAGAGACATT+GGG | - | chr8.2:8862221-8862240 | MS.gene26730:intron | 45.0% | |
! | GGGTACCTTTTGCCAAACTT+TGG | + | chr8.2:8860917-8860936 | None:intergenic | 45.0% |
! | GTTGTTTGAAGCTGATCCCA+TGG | - | chr8.2:8861034-8861053 | MS.gene26730:CDS | 45.0% |
! | TCTGGCATTCAGGTTATGGT+TGG | - | chr8.2:8861077-8861096 | MS.gene26730:CDS | 45.0% |
!! | AGTTTGGCAAAAGGTACCCT+TGG | - | chr8.2:8860918-8860937 | MS.gene26730:CDS | 45.0% |
!! | ATGGAAGACCAGTGTCACTT+TGG | + | chr8.2:8861753-8861772 | None:intergenic | 45.0% |
!! | CCTTGGCTTTGCTTGCAATT+GGG | - | chr8.2:8860935-8860954 | MS.gene26730:CDS | 45.0% |
!! | CTTGGCTTTGCTTGCAATTG+GGG | - | chr8.2:8860936-8860955 | MS.gene26730:CDS | 45.0% |
!! | GGTGGTGGAAAATCACTAGT+TGG | - | chr8.2:8862288-8862307 | MS.gene26730:intron | 45.0% |
CAATGCTGCTATTGCATGGG+TGG | - | chr8.2:8861139-8861158 | MS.gene26730:CDS | 50.0% | |
CAATGTCTCTCAAATGGGCC+AGG | + | chr8.2:8862222-8862241 | None:intergenic | 50.0% | |
CCCAATTGCAAGCAAAGCCA+AGG | + | chr8.2:8860938-8860957 | None:intergenic | 50.0% | |
CTGAAGGCTCTTGGGAATTC+TGG | - | chr8.2:8861059-8861078 | MS.gene26730:CDS | 50.0% | |
CTGGCCCATTTGAGAGACAT+TGG | - | chr8.2:8862220-8862239 | MS.gene26730:intron | 50.0% | |
GGCCCATTTGAGAGACATTG+GGG | - | chr8.2:8862222-8862241 | MS.gene26730:intron | 50.0% | |
TGGCATACCCAATGACCTCT+TGG | - | chr8.2:8861097-8861116 | MS.gene26730:CDS | 50.0% | |
! | GAAGTTGGTTGGCCAACTGA+TGG | - | chr8.2:8862048-8862067 | MS.gene26730:intron | 50.0% |
! | GGTCTAAAGTGTCCACCTGA+TGG | + | chr8.2:8861772-8861791 | None:intergenic | 50.0% |
! | TCAGGTGGGGTAGGTCTTTT+AGG | + | chr8.2:8862153-8862172 | None:intergenic | 50.0% |
!! | AGTGACACTGGTCTTCCATC+AGG | - | chr8.2:8861754-8861773 | MS.gene26730:CDS | 50.0% |
!! | CCCTTGGCTTTGCTTGCAAT+TGG | - | chr8.2:8860934-8860953 | MS.gene26730:CDS | 50.0% |
CCAAGAGCCTTCAGTGCCAT+GGG | + | chr8.2:8861053-8861072 | None:intergenic | 55.0% | |
TCTGCTGCCCCTGTAGTTGA+TGG | - | chr8.2:8861928-8861947 | MS.gene26730:CDS | 55.0% | |
! | AGCTGATCCCATGGCACTGA+AGG | - | chr8.2:8861043-8861062 | MS.gene26730:CDS | 55.0% |
! | CCATGGCACTGAAGGCTCTT+GGG | - | chr8.2:8861051-8861070 | MS.gene26730:CDS | 55.0% |
! | GCTCCTGGCTCTTCTTGTAG+TGG | - | chr8.2:8862435-8862454 | MS.gene26730:CDS | 55.0% |
!! | GACACTGGTCTTCCATCAGG+TGG | - | chr8.2:8861757-8861776 | MS.gene26730:CDS | 55.0% |
CCCAAGAGCCTTCAGTGCCA+TGG | + | chr8.2:8861054-8861073 | None:intergenic | 60.0% | |
! | CCCATGGCACTGAAGGCTCT+TGG | - | chr8.2:8861050-8861069 | MS.gene26730:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 8860861 | 8862728 | 8860861 | ID=MS.gene26730 |
chr8.2 | mRNA | 8860861 | 8862728 | 8860861 | ID=MS.gene26730.t1;Parent=MS.gene26730 |
chr8.2 | exon | 8862382 | 8862728 | 8862382 | ID=MS.gene26730.t1.exon1;Parent=MS.gene26730.t1 |
chr8.2 | CDS | 8862382 | 8862728 | 8862382 | ID=cds.MS.gene26730.t1;Parent=MS.gene26730.t1 |
chr8.2 | exon | 8860861 | 8861995 | 8860861 | ID=MS.gene26730.t1.exon2;Parent=MS.gene26730.t1 |
chr8.2 | CDS | 8860861 | 8861995 | 8860861 | ID=cds.MS.gene26730.t1;Parent=MS.gene26730.t1 |
Gene Sequence |
Protein sequence |