Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030216.t1 | XP_003609925.2 | 97.3 | 449 | 11 | 1 | 1 | 449 | 45 | 492 | 1.90E-252 | 881.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030216.t1 | Q9M088 | 57.9 | 439 | 180 | 2 | 1 | 439 | 44 | 477 | 6.1e-143 | 508.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030216.t1 | G7JR55 | 97.3 | 449 | 11 | 1 | 1 | 449 | 45 | 492 | 1.3e-252 | 881.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene030216 | MS.gene98955 | PPI |
MS.gene83087 | MS.gene030216 | PPI |
MS.gene02879 | MS.gene030216 | PPI |
MS.gene030216 | MS.gene03697 | PPI |
MS.gene25205 | MS.gene030216 | PPI |
MS.gene026550 | MS.gene030216 | PPI |
MS.gene030216 | MS.gene43455 | PPI |
MS.gene012767 | MS.gene030216 | PPI |
MS.gene030216 | MS.gene003156 | PPI |
MS.gene048284 | MS.gene030216 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030216.t1 | MTR_4g124440 | 97.327 | 449 | 11 | 1 | 1 | 449 | 45 | 492 | 0.0 | 900 |
MS.gene030216.t1 | MTR_1g010120 | 59.951 | 412 | 162 | 2 | 1 | 411 | 43 | 452 | 2.66e-175 | 499 |
MS.gene030216.t1 | MTR_3g108600 | 53.288 | 441 | 183 | 3 | 1 | 439 | 48 | 467 | 3.31e-161 | 463 |
MS.gene030216.t1 | MTR_6g032820 | 55.164 | 397 | 168 | 5 | 1 | 389 | 43 | 437 | 1.48e-151 | 437 |
MS.gene030216.t1 | MTR_2g027560 | 52.123 | 424 | 195 | 5 | 1 | 420 | 45 | 464 | 1.28e-150 | 437 |
MS.gene030216.t1 | MTR_4g112025 | 51.079 | 417 | 194 | 6 | 1 | 411 | 48 | 460 | 1.48e-150 | 438 |
MS.gene030216.t1 | MTR_8g092070 | 50.000 | 414 | 201 | 3 | 1 | 411 | 51 | 461 | 5.61e-149 | 436 |
MS.gene030216.t1 | MTR_7g085390 | 52.326 | 430 | 196 | 5 | 1 | 425 | 43 | 468 | 1.65e-148 | 431 |
MS.gene030216.t1 | MTR_1g053320 | 47.577 | 454 | 218 | 6 | 1 | 448 | 47 | 486 | 8.03e-147 | 427 |
MS.gene030216.t1 | MTR_3g095050 | 46.606 | 442 | 226 | 6 | 1 | 437 | 51 | 487 | 1.34e-131 | 389 |
MS.gene030216.t1 | MTR_4g134280 | 49.606 | 381 | 180 | 6 | 73 | 449 | 2 | 374 | 3.84e-127 | 373 |
MS.gene030216.t1 | MTR_3g031770 | 44.258 | 418 | 226 | 5 | 1 | 417 | 44 | 455 | 5.76e-119 | 357 |
MS.gene030216.t1 | MTR_4g088155 | 33.871 | 434 | 250 | 19 | 2 | 411 | 41 | 461 | 1.04e-65 | 218 |
MS.gene030216.t1 | MTR_8g012400 | 35.831 | 427 | 246 | 17 | 2 | 411 | 47 | 462 | 1.24e-65 | 218 |
MS.gene030216.t1 | MTR_3g116510 | 34.300 | 414 | 245 | 15 | 2 | 399 | 46 | 448 | 2.02e-62 | 209 |
MS.gene030216.t1 | MTR_4g069940 | 33.573 | 417 | 248 | 15 | 2 | 399 | 47 | 453 | 7.40e-61 | 205 |
MS.gene030216.t1 | MTR_1g031900 | 32.488 | 434 | 264 | 13 | 2 | 424 | 42 | 457 | 3.20e-58 | 199 |
MS.gene030216.t1 | MTR_1g031900 | 33.094 | 417 | 255 | 12 | 2 | 407 | 42 | 445 | 1.70e-57 | 197 |
MS.gene030216.t1 | MTR_7g053500 | 32.243 | 428 | 255 | 18 | 2 | 407 | 44 | 458 | 5.98e-56 | 192 |
MS.gene030216.t1 | MTR_2g034480 | 35.275 | 309 | 191 | 5 | 1 | 308 | 44 | 344 | 6.18e-56 | 189 |
MS.gene030216.t1 | MTR_2g034470 | 36.066 | 305 | 186 | 5 | 2 | 305 | 13 | 309 | 2.93e-55 | 187 |
MS.gene030216.t1 | MTR_5g078200 | 31.591 | 421 | 258 | 15 | 1 | 407 | 7 | 411 | 4.68e-55 | 193 |
MS.gene030216.t1 | MTR_2g034470 | 36.066 | 305 | 186 | 5 | 2 | 305 | 48 | 344 | 5.96e-55 | 187 |
MS.gene030216.t1 | MTR_4g010200 | 36.825 | 315 | 183 | 10 | 1 | 307 | 50 | 356 | 6.09e-55 | 187 |
MS.gene030216.t1 | MTR_5g078200 | 31.591 | 421 | 258 | 15 | 1 | 407 | 40 | 444 | 6.25e-55 | 193 |
MS.gene030216.t1 | MTR_8g012400 | 34.694 | 392 | 228 | 16 | 37 | 411 | 2 | 382 | 2.35e-54 | 186 |
MS.gene030216.t1 | MTR_1g056640 | 29.530 | 447 | 264 | 15 | 1 | 407 | 55 | 490 | 1.29e-53 | 187 |
MS.gene030216.t1 | MTR_2g034440 | 36.093 | 302 | 183 | 6 | 2 | 301 | 40 | 333 | 2.07e-53 | 182 |
MS.gene030216.t1 | MTR_3g083580 | 29.017 | 417 | 269 | 14 | 1 | 405 | 43 | 444 | 2.61e-53 | 186 |
MS.gene030216.t1 | MTR_4g076570 | 34.653 | 303 | 187 | 7 | 1 | 301 | 39 | 332 | 3.21e-53 | 182 |
MS.gene030216.t1 | MTR_5g085580 | 31.279 | 438 | 257 | 17 | 1 | 407 | 42 | 466 | 6.07e-53 | 184 |
MS.gene030216.t1 | MTR_3g065460 | 30.679 | 427 | 254 | 18 | 1 | 407 | 41 | 445 | 1.59e-52 | 184 |
MS.gene030216.t1 | MTR_1g022160 | 29.955 | 444 | 262 | 15 | 2 | 407 | 42 | 474 | 2.69e-52 | 183 |
MS.gene030216.t1 | MTR_6g088885 | 30.876 | 434 | 265 | 19 | 3 | 418 | 46 | 462 | 4.62e-52 | 183 |
MS.gene030216.t1 | MTR_8g085720 | 30.714 | 420 | 264 | 15 | 1 | 407 | 43 | 448 | 5.15e-52 | 182 |
MS.gene030216.t1 | MTR_1g022160 | 29.817 | 436 | 259 | 14 | 2 | 399 | 42 | 468 | 8.19e-52 | 182 |
MS.gene030216.t1 | MTR_1g022160 | 29.655 | 435 | 259 | 14 | 2 | 398 | 42 | 467 | 3.63e-51 | 180 |
MS.gene030216.t1 | MTR_7g081350 | 37.829 | 304 | 174 | 10 | 1 | 301 | 44 | 335 | 5.98e-51 | 176 |
MS.gene030216.t1 | MTR_1g052430 | 35.216 | 301 | 184 | 8 | 1 | 299 | 49 | 340 | 6.40e-51 | 177 |
MS.gene030216.t1 | MTR_4g132280 | 28.605 | 423 | 268 | 14 | 1 | 407 | 62 | 466 | 1.21e-49 | 177 |
MS.gene030216.t1 | MTR_7g026340 | 30.310 | 419 | 256 | 19 | 1 | 399 | 40 | 442 | 1.85e-49 | 174 |
MS.gene030216.t1 | MTR_7g053500 | 32.570 | 393 | 230 | 18 | 37 | 407 | 2 | 381 | 1.39e-48 | 171 |
MS.gene030216.t1 | MTR_4g114850 | 35.032 | 314 | 186 | 10 | 1 | 305 | 43 | 347 | 1.47e-48 | 170 |
MS.gene030216.t1 | MTR_4g114850 | 35.032 | 314 | 186 | 10 | 1 | 305 | 43 | 347 | 1.72e-48 | 170 |
MS.gene030216.t1 | MTR_4g114850 | 35.032 | 314 | 186 | 10 | 1 | 305 | 43 | 347 | 2.41e-48 | 170 |
MS.gene030216.t1 | MTR_4g076430 | 34.211 | 304 | 184 | 9 | 1 | 303 | 40 | 328 | 4.72e-47 | 165 |
MS.gene030216.t1 | MTR_7g081370 | 37.954 | 303 | 162 | 11 | 1 | 301 | 45 | 323 | 5.69e-47 | 165 |
MS.gene030216.t1 | MTR_4g076255 | 34.314 | 306 | 181 | 10 | 1 | 303 | 42 | 330 | 7.01e-47 | 165 |
MS.gene030216.t1 | MTR_3g080410 | 34.069 | 317 | 193 | 10 | 1 | 308 | 43 | 352 | 1.01e-46 | 165 |
MS.gene030216.t1 | MTR_4g076470 | 33.000 | 300 | 185 | 8 | 1 | 299 | 40 | 324 | 2.11e-46 | 163 |
MS.gene030216.t1 | MTR_4g076440 | 32.450 | 302 | 188 | 9 | 1 | 301 | 40 | 326 | 7.68e-46 | 162 |
MS.gene030216.t1 | MTR_4g076500 | 33.225 | 307 | 189 | 9 | 1 | 303 | 95 | 389 | 1.41e-45 | 163 |
MS.gene030216.t1 | MTR_1g077990 | 36.422 | 313 | 177 | 14 | 1 | 304 | 48 | 347 | 2.10e-45 | 163 |
MS.gene030216.t1 | MTR_1g007810 | 34.868 | 304 | 178 | 12 | 4 | 299 | 37 | 328 | 3.81e-45 | 161 |
MS.gene030216.t1 | MTR_4g084480 | 32.051 | 312 | 197 | 10 | 1 | 305 | 49 | 352 | 3.89e-45 | 162 |
MS.gene030216.t1 | MTR_4g084480 | 32.051 | 312 | 197 | 10 | 1 | 305 | 42 | 345 | 4.35e-45 | 161 |
MS.gene030216.t1 | MTR_4g084480 | 32.051 | 312 | 197 | 10 | 1 | 305 | 49 | 352 | 4.90e-45 | 161 |
MS.gene030216.t1 | MTR_4g052970 | 29.462 | 353 | 217 | 13 | 4 | 347 | 49 | 378 | 7.66e-45 | 160 |
MS.gene030216.t1 | MTR_2g086530 | 32.464 | 345 | 201 | 16 | 4 | 337 | 28 | 351 | 8.25e-44 | 157 |
MS.gene030216.t1 | MTR_2g086530 | 32.464 | 345 | 201 | 16 | 4 | 337 | 49 | 372 | 1.35e-43 | 157 |
MS.gene030216.t1 | MTR_1g022160 | 32.787 | 305 | 190 | 9 | 3 | 299 | 43 | 340 | 2.01e-43 | 157 |
MS.gene030216.t1 | MTR_3g116510 | 33.851 | 322 | 189 | 13 | 94 | 399 | 1 | 314 | 3.95e-43 | 154 |
MS.gene030216.t1 | MTR_4g076490 | 31.596 | 307 | 193 | 9 | 1 | 305 | 114 | 405 | 6.61e-42 | 154 |
MS.gene030216.t1 | MTR_8g102340 | 30.435 | 368 | 233 | 13 | 52 | 407 | 62 | 418 | 1.97e-41 | 154 |
MS.gene030216.t1 | MTR_4g083500 | 26.498 | 434 | 276 | 15 | 4 | 407 | 65 | 485 | 4.20e-38 | 145 |
MS.gene030216.t1 | MTR_2g019345 | 31.579 | 304 | 190 | 12 | 4 | 299 | 44 | 337 | 3.28e-37 | 140 |
MS.gene030216.t1 | MTR_5g081720 | 28.477 | 302 | 198 | 10 | 5 | 299 | 58 | 348 | 8.41e-28 | 114 |
MS.gene030216.t1 | MTR_4g036680 | 33.019 | 106 | 66 | 3 | 198 | 302 | 75 | 176 | 8.45e-13 | 67.8 |
MS.gene030216.t1 | MTR_4g036775 | 33.019 | 106 | 66 | 3 | 198 | 302 | 75 | 176 | 2.84e-12 | 66.2 |
MS.gene030216.t1 | MTR_1g116870 | 40.909 | 88 | 46 | 4 | 322 | 407 | 276 | 359 | 7.29e-12 | 67.0 |
MS.gene030216.t1 | MTR_8g085440 | 38.889 | 90 | 49 | 4 | 320 | 407 | 30 | 115 | 6.94e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030216.t1 | AT5G20870 | 62.252 | 453 | 154 | 5 | 1 | 438 | 47 | 497 | 0.0 | 578 |
MS.gene030216.t1 | AT4G31140 | 57.859 | 439 | 180 | 2 | 1 | 439 | 44 | 477 | 5.00e-180 | 512 |
MS.gene030216.t1 | AT5G58090 | 57.729 | 414 | 171 | 2 | 1 | 412 | 39 | 450 | 1.57e-175 | 500 |
MS.gene030216.t1 | AT2G19440 | 54.808 | 416 | 178 | 6 | 1 | 411 | 38 | 448 | 1.53e-154 | 447 |
MS.gene030216.t1 | AT2G19440 | 54.808 | 416 | 178 | 6 | 1 | 411 | 38 | 448 | 1.53e-154 | 447 |
MS.gene030216.t1 | AT1G64760 | 54.327 | 416 | 180 | 6 | 1 | 411 | 42 | 452 | 3.35e-153 | 444 |
MS.gene030216.t1 | AT1G64760 | 54.327 | 416 | 180 | 6 | 1 | 411 | 42 | 452 | 3.35e-153 | 444 |
MS.gene030216.t1 | AT5G64790 | 50.966 | 414 | 197 | 4 | 1 | 411 | 45 | 455 | 1.10e-147 | 430 |
MS.gene030216.t1 | AT3G24330 | 51.429 | 420 | 194 | 6 | 1 | 414 | 56 | 471 | 2.31e-147 | 429 |
MS.gene030216.t1 | AT3G04010 | 51.202 | 416 | 194 | 5 | 1 | 411 | 50 | 461 | 1.05e-142 | 417 |
MS.gene030216.t1 | AT4G17180 | 50.239 | 418 | 193 | 7 | 1 | 414 | 42 | 448 | 3.20e-142 | 415 |
MS.gene030216.t1 | AT5G18220 | 50.835 | 419 | 192 | 7 | 1 | 411 | 47 | 459 | 2.88e-141 | 413 |
MS.gene030216.t1 | AT5G58480 | 41.981 | 424 | 239 | 5 | 1 | 423 | 43 | 460 | 1.56e-118 | 355 |
MS.gene030216.t1 | AT4G26830 | 32.944 | 428 | 248 | 16 | 1 | 407 | 46 | 455 | 8.50e-65 | 216 |
MS.gene030216.t1 | AT4G26830 | 32.944 | 428 | 248 | 16 | 1 | 407 | 42 | 451 | 9.62e-65 | 215 |
MS.gene030216.t1 | AT2G01630 | 32.381 | 420 | 256 | 15 | 1 | 407 | 40 | 444 | 1.93e-64 | 216 |
MS.gene030216.t1 | AT5G55180 | 31.850 | 427 | 257 | 16 | 1 | 407 | 44 | 456 | 3.90e-64 | 214 |
MS.gene030216.t1 | AT2G01630 | 32.282 | 412 | 253 | 14 | 1 | 399 | 40 | 438 | 5.15e-64 | 213 |
MS.gene030216.t1 | AT2G05790 | 32.192 | 438 | 255 | 16 | 1 | 407 | 42 | 468 | 5.95e-64 | 214 |
MS.gene030216.t1 | AT5G55180 | 31.981 | 419 | 253 | 15 | 1 | 399 | 44 | 450 | 8.15e-63 | 211 |
MS.gene030216.t1 | AT4G34480 | 34.804 | 408 | 246 | 13 | 2 | 399 | 44 | 441 | 1.73e-61 | 208 |
MS.gene030216.t1 | AT5G24318 | 30.496 | 423 | 259 | 18 | 4 | 408 | 51 | 456 | 8.69e-58 | 197 |
MS.gene030216.t1 | AT3G57270 | 37.829 | 304 | 178 | 7 | 2 | 303 | 45 | 339 | 1.01e-57 | 194 |
MS.gene030216.t1 | AT2G16230 | 31.398 | 465 | 286 | 17 | 3 | 448 | 44 | 494 | 1.64e-57 | 197 |
MS.gene030216.t1 | AT1G66250 | 31.415 | 417 | 263 | 11 | 1 | 407 | 49 | 452 | 4.74e-57 | 196 |
MS.gene030216.t1 | AT5G24318 | 30.676 | 414 | 254 | 17 | 4 | 399 | 51 | 449 | 8.36e-57 | 194 |
MS.gene030216.t1 | AT1G11820 | 29.314 | 423 | 265 | 14 | 1 | 407 | 61 | 465 | 9.16e-56 | 193 |
MS.gene030216.t1 | AT5G56590 | 29.932 | 441 | 278 | 15 | 1 | 425 | 43 | 468 | 3.62e-55 | 191 |
MS.gene030216.t1 | AT3G23770 | 31.776 | 428 | 259 | 17 | 2 | 407 | 55 | 471 | 4.88e-55 | 190 |
MS.gene030216.t1 | AT1G11820 | 28.916 | 415 | 263 | 13 | 1 | 399 | 61 | 459 | 1.78e-54 | 189 |
MS.gene030216.t1 | AT3G07320 | 32.311 | 424 | 258 | 18 | 2 | 407 | 43 | 455 | 1.84e-54 | 188 |
MS.gene030216.t1 | AT3G13560 | 32.039 | 412 | 253 | 14 | 1 | 399 | 43 | 440 | 3.31e-54 | 189 |
MS.gene030216.t1 | AT3G13560 | 32.039 | 412 | 253 | 14 | 1 | 399 | 43 | 440 | 3.31e-54 | 189 |
MS.gene030216.t1 | AT3G13560 | 32.039 | 412 | 253 | 14 | 1 | 399 | 43 | 440 | 3.31e-54 | 189 |
MS.gene030216.t1 | AT3G13560 | 32.039 | 412 | 253 | 14 | 1 | 399 | 43 | 440 | 3.31e-54 | 189 |
MS.gene030216.t1 | AT3G13560 | 32.039 | 412 | 253 | 14 | 1 | 399 | 43 | 440 | 3.31e-54 | 189 |
MS.gene030216.t1 | AT3G55430 | 33.573 | 417 | 236 | 21 | 10 | 407 | 55 | 449 | 3.24e-53 | 185 |
MS.gene030216.t1 | AT4G14080 | 31.566 | 415 | 258 | 14 | 2 | 398 | 60 | 466 | 1.10e-52 | 184 |
MS.gene030216.t1 | AT4G16260 | 35.390 | 308 | 186 | 8 | 2 | 307 | 13 | 309 | 2.31e-52 | 179 |
MS.gene030216.t1 | AT4G16260 | 35.390 | 308 | 186 | 8 | 2 | 307 | 42 | 338 | 3.43e-52 | 179 |
MS.gene030216.t1 | AT3G57260 | 35.738 | 305 | 179 | 10 | 1 | 303 | 49 | 338 | 2.25e-51 | 177 |
MS.gene030216.t1 | AT3G57260 | 35.738 | 305 | 179 | 10 | 1 | 303 | 65 | 354 | 2.36e-51 | 177 |
MS.gene030216.t1 | AT2G01630 | 33.022 | 321 | 197 | 10 | 1 | 311 | 40 | 352 | 6.51e-50 | 174 |
MS.gene030216.t1 | AT4G34480 | 36.825 | 315 | 183 | 10 | 2 | 308 | 44 | 350 | 2.79e-49 | 172 |
MS.gene030216.t1 | AT4G29360 | 28.217 | 443 | 271 | 13 | 3 | 409 | 46 | 477 | 1.48e-48 | 174 |
MS.gene030216.t1 | AT4G29360 | 28.217 | 443 | 271 | 13 | 3 | 409 | 56 | 487 | 1.49e-48 | 174 |
MS.gene030216.t1 | AT3G15800 | 34.177 | 316 | 193 | 10 | 1 | 308 | 60 | 368 | 1.54e-48 | 171 |
MS.gene030216.t1 | AT1G32860 | 34.405 | 311 | 185 | 12 | 1 | 301 | 46 | 347 | 3.17e-48 | 171 |
MS.gene030216.t1 | AT2G27500 | 34.304 | 309 | 189 | 9 | 4 | 305 | 49 | 350 | 1.73e-46 | 165 |
MS.gene030216.t1 | AT2G27500 | 34.304 | 309 | 189 | 9 | 4 | 305 | 49 | 350 | 4.41e-46 | 164 |
MS.gene030216.t1 | AT2G26600 | 33.754 | 317 | 192 | 10 | 1 | 308 | 51 | 358 | 4.25e-45 | 161 |
MS.gene030216.t1 | AT2G39640 | 31.382 | 427 | 252 | 21 | 11 | 422 | 57 | 457 | 4.31e-45 | 165 |
MS.gene030216.t1 | AT4G34480 | 33.929 | 336 | 204 | 12 | 74 | 399 | 3 | 330 | 1.71e-44 | 160 |
MS.gene030216.t1 | AT5G24318 | 32.343 | 303 | 187 | 12 | 4 | 299 | 51 | 342 | 3.03e-44 | 159 |
MS.gene030216.t1 | AT1G77780 | 33.673 | 294 | 180 | 10 | 2 | 292 | 42 | 323 | 1.03e-43 | 157 |
MS.gene030216.t1 | AT1G77790 | 33.770 | 305 | 186 | 9 | 2 | 301 | 48 | 341 | 6.24e-43 | 155 |
MS.gene030216.t1 | AT1G30080 | 30.619 | 307 | 196 | 11 | 1 | 299 | 53 | 350 | 1.74e-42 | 154 |
MS.gene030216.t1 | AT1G30080 | 30.619 | 307 | 196 | 11 | 1 | 299 | 53 | 350 | 2.25e-42 | 155 |
MS.gene030216.t1 | AT3G57240 | 32.248 | 307 | 186 | 10 | 1 | 303 | 52 | 340 | 5.32e-41 | 149 |
MS.gene030216.t1 | AT3G61810 | 32.588 | 313 | 184 | 13 | 4 | 304 | 75 | 372 | 6.15e-41 | 150 |
MS.gene030216.t1 | AT4G18340 | 30.990 | 313 | 195 | 12 | 1 | 304 | 51 | 351 | 2.41e-40 | 149 |
MS.gene030216.t1 | AT4G18340 | 30.990 | 313 | 195 | 12 | 1 | 304 | 51 | 351 | 4.65e-40 | 148 |
MS.gene030216.t1 | AT5G42720 | 32.903 | 310 | 191 | 11 | 3 | 303 | 45 | 346 | 1.06e-39 | 148 |
MS.gene030216.t1 | AT1G11820 | 29.206 | 315 | 207 | 9 | 1 | 306 | 61 | 368 | 1.26e-39 | 147 |
MS.gene030216.t1 | AT5G42100 | 31.629 | 313 | 196 | 12 | 1 | 303 | 44 | 348 | 1.75e-39 | 147 |
MS.gene030216.t1 | AT5G42100 | 31.629 | 313 | 196 | 12 | 1 | 303 | 44 | 348 | 2.11e-39 | 147 |
MS.gene030216.t1 | AT5G24318 | 30.000 | 330 | 200 | 14 | 97 | 408 | 1 | 317 | 4.45e-39 | 144 |
MS.gene030216.t1 | AT2G27500 | 34.050 | 279 | 170 | 9 | 34 | 305 | 1 | 272 | 5.68e-39 | 143 |
MS.gene030216.t1 | AT5G20390 | 30.743 | 296 | 189 | 9 | 1 | 292 | 50 | 333 | 1.06e-37 | 140 |
MS.gene030216.t1 | AT5G20560 | 29.801 | 302 | 185 | 8 | 1 | 292 | 51 | 335 | 2.01e-37 | 139 |
MS.gene030216.t1 | AT1G33220 | 30.961 | 281 | 181 | 8 | 1 | 277 | 51 | 322 | 2.05e-37 | 139 |
MS.gene030216.t1 | AT5G20340 | 30.100 | 299 | 187 | 11 | 1 | 292 | 60 | 343 | 3.14e-35 | 134 |
MS.gene030216.t1 | AT2G26600 | 34.066 | 273 | 162 | 10 | 45 | 308 | 1 | 264 | 5.02e-35 | 132 |
MS.gene030216.t1 | AT5G20330 | 29.730 | 296 | 192 | 9 | 1 | 292 | 51 | 334 | 1.43e-34 | 132 |
MS.gene030216.t1 | AT3G46570 | 30.537 | 298 | 188 | 11 | 10 | 299 | 54 | 340 | 1.15e-29 | 119 |
MS.gene030216.t1 | AT3G55780 | 25.974 | 308 | 208 | 10 | 10 | 307 | 61 | 358 | 5.90e-26 | 108 |
Find 94 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAAATTCTTTAGGGAAATT+AGG | 0.162535 | 8.2:+9025850 | None:intergenic |
TCAAAGAAAGCAAATTCTTT+AGG | 0.203190 | 8.2:+9025841 | None:intergenic |
CTCATACTTTGTGCAAAATT+AGG | 0.205482 | 8.2:+9025364 | None:intergenic |
AAAGAATTTGCTTTCTTTGA+TGG | 0.208174 | 8.2:-9025838 | MS.gene030216:CDS |
TTTGAGATCATGATTGATAT+TGG | 0.242623 | 8.2:-9025145 | MS.gene030216:CDS |
ATGTAAGAGGGCCGTTATTT+TGG | 0.244858 | 8.2:+9025908 | None:intergenic |
CTGAAGGCTCTTGGGAATTC+TGG | 0.246366 | 8.2:-9026739 | MS.gene030216:CDS |
TCTTGGGAATTCTGGCATTC+AGG | 0.280623 | 8.2:-9026731 | MS.gene030216:CDS |
ATGAAATACCCTTTGAATCT+TGG | 0.284657 | 8.2:-9025475 | MS.gene030216:CDS |
CAAAGAAAGCAAATTCTTTA+GGG | 0.289026 | 8.2:+9025842 | None:intergenic |
AGGGCAAACATGTAAATTTC+AGG | 0.292702 | 8.2:+9025574 | None:intergenic |
GAAATAACACACCATTGTTT+TGG | 0.299535 | 8.2:+9025409 | None:intergenic |
GAATTCTGGCATTCAGGTTA+TGG | 0.301145 | 8.2:-9026725 | MS.gene030216:CDS |
TGGTAGACATCAGCATTTAA+AGG | 0.322180 | 8.2:+9026012 | None:intergenic |
ATTTGATTATTGACATCATT+TGG | 0.333649 | 8.2:+9025938 | None:intergenic |
TCTGCTGCCCCTGTAGTTGA+TGG | 0.360256 | 8.2:-9025814 | MS.gene030216:CDS |
ATATGAAGGCGGAAACATTT+TGG | 0.364501 | 8.2:+9026635 | None:intergenic |
GGTAGACATCAGCATTTAAA+GGG | 0.366946 | 8.2:+9026013 | None:intergenic |
TTGAGATCATGATTGATATT+GGG | 0.371941 | 8.2:-9025144 | MS.gene030216:CDS |
ATTCCCCAATGTCTCTCAAA+TGG | 0.397966 | 8.2:+9025517 | None:intergenic |
CCCATGGCACTGAAGGCTCT+TGG | 0.409961 | 8.2:-9026748 | MS.gene030216:CDS |
AAATCACTAGTTGGTGCTAA+AGG | 0.413423 | 8.2:-9025445 | MS.gene030216:CDS |
CCATGGCACTGAAGGCTCTT+GGG | 0.419662 | 8.2:-9026747 | MS.gene030216:CDS |
AATCACTAGTTGGTGCTAAA+GGG | 0.420833 | 8.2:-9025444 | MS.gene030216:CDS |
TGGCCCATTTGAGAGACATT+GGG | 0.432301 | 8.2:-9025521 | MS.gene030216:CDS |
AAAGATGCATGTCAATTCAA+TGG | 0.443198 | 8.2:-9025220 | MS.gene030216:CDS |
TTCATCTCAAGCAAATGTAA+TGG | 0.443401 | 8.2:-9025389 | MS.gene030216:CDS |
GGGTAGATGTTAAATGTAAG+AGG | 0.443692 | 8.2:+9025895 | None:intergenic |
TAATATGTATTATCAAAGAA+TGG | 0.448941 | 8.2:-9025251 | MS.gene030216:CDS |
TGGCATACCCAATGACCTCT+TGG | 0.450780 | 8.2:-9026701 | MS.gene030216:CDS |
AATGTTATCATTGGTGAAGT+TGG | 0.454844 | 8.2:-9025709 | MS.gene030216:CDS |
GCATTTGATGTTCCATCAGT+TGG | 0.457755 | 8.2:+9025682 | None:intergenic |
AGCTGATCCCATGGCACTGA+AGG | 0.462871 | 8.2:-9026755 | MS.gene030216:CDS |
CAAGCAGCCCTTATAAAAGC+AGG | 0.466267 | 8.2:-9026063 | MS.gene030216:CDS |
GGTTCAATGAATGTTATCAT+TGG | 0.468945 | 8.2:-9025718 | MS.gene030216:CDS |
AAGTGAATCCAAGAGGTCAT+TGG | 0.477036 | 8.2:+9026693 | None:intergenic |
AGTGAATCCAAGAGGTCATT+GGG | 0.485799 | 8.2:+9026694 | None:intergenic |
CTGGCCCATTTGAGAGACAT+TGG | 0.488422 | 8.2:-9025522 | MS.gene030216:CDS |
TCAGCATCAAGGCTTAGAAA+AGG | 0.491244 | 8.2:+9025874 | None:intergenic |
TTCCCCAATGTCTCTCAAAT+GGG | 0.492714 | 8.2:+9025518 | None:intergenic |
CCCAAGAGCCTTCAGTGCCA+TGG | 0.497598 | 8.2:+9026747 | None:intergenic |
GCTCCTGGCTCTTCTTGTAG+TGG | 0.498871 | 8.2:-9025307 | MS.gene030216:CDS |
GATTGTACATCTCTTGCTCC+TGG | 0.501491 | 8.2:-9025322 | MS.gene030216:CDS |
AAATTTCTTAGCCAAAATAA+CGG | 0.503273 | 8.2:-9025919 | MS.gene030216:CDS |
AGTGACACTGGTCTTCCATC+AGG | 0.505930 | 8.2:-9025988 | MS.gene030216:CDS |
GATATGGAACCATCAACTAC+AGG | 0.506108 | 8.2:+9025805 | None:intergenic |
TACCCTTTGAATCTTGGTGG+TGG | 0.509344 | 8.2:-9025469 | MS.gene030216:CDS |
CAATGTCTCTCAAATGGGCC+AGG | 0.515554 | 8.2:+9025523 | None:intergenic |
GCCCTTATAAAAGCAGGGTT+AGG | 0.517583 | 8.2:-9026057 | MS.gene030216:CDS |
TTTCCACCACCAAGATTCAA+AGG | 0.519584 | 8.2:+9025466 | None:intergenic |
TCTGGCATTCAGGTTATGGT+TGG | 0.523834 | 8.2:-9026721 | MS.gene030216:CDS |
GGAAATTAGGATCAGCATCA+AGG | 0.525105 | 8.2:+9025863 | None:intergenic |
ATGGAAGACCAGTGTCACTT+TGG | 0.528047 | 8.2:+9025992 | None:intergenic |
ATTCCCAGGTATGTTGCAGT+TGG | 0.531912 | 8.2:-9026156 | MS.gene030216:intron |
TGTAGTGGTTTAGACACAAA+GGG | 0.535458 | 8.2:-9025292 | MS.gene030216:CDS |
CAGCATCAAGGCTTAGAAAA+GGG | 0.536287 | 8.2:+9025875 | None:intergenic |
ATGTAAATTTCAGGTGGGGT+AGG | 0.542978 | 8.2:+9025583 | None:intergenic |
AGAGTACATAATGGTCATGC+TGG | 0.544525 | 8.2:-9025074 | MS.gene030216:CDS |
CCAAGAGCCTTCAGTGCCAT+GGG | 0.544609 | 8.2:+9026748 | None:intergenic |
AATTGGATTAGAGTACATAA+TGG | 0.544687 | 8.2:-9025083 | MS.gene030216:CDS |
AGACTATACAAATAGAGATA+AGG | 0.546510 | 8.2:+9025033 | None:intergenic |
TTCCACCACCAAGATTCAAA+GGG | 0.549004 | 8.2:+9025467 | None:intergenic |
GGTCTAAAGTGTCCACCTGA+TGG | 0.549481 | 8.2:+9025973 | None:intergenic |
TGCAATAGCAGCATTGACAT+TGG | 0.551848 | 8.2:+9026666 | None:intergenic |
AGTGCTCAAAGATTTAATCA+AGG | 0.558025 | 8.2:-9025649 | MS.gene030216:CDS |
TTAAATATTTGCCAAAACAA+TGG | 0.559751 | 8.2:-9025420 | MS.gene030216:CDS |
AGAAGGTGAAGGATCAATGT+TGG | 0.571619 | 8.2:+9025183 | None:intergenic |
ATGTCAATGCTGCTATTGCA+TGG | 0.571781 | 8.2:-9026663 | MS.gene030216:CDS |
ATCACTAGTTGGTGCTAAAG+GGG | 0.581029 | 8.2:-9025443 | MS.gene030216:CDS |
AAATACCCTTTGAATCTTGG+TGG | 0.581742 | 8.2:-9025472 | MS.gene030216:CDS |
ATTGATCCTTCACCTTCTCA+AGG | 0.584331 | 8.2:-9025178 | MS.gene030216:CDS |
GTGAAGCTTATGAAAGACAA+TGG | 0.584491 | 8.2:-9026802 | MS.gene030216:CDS |
ATATGGAACCATCAACTACA+GGG | 0.586294 | 8.2:+9025806 | None:intergenic |
TTGTAGTGGTTTAGACACAA+AGG | 0.587590 | 8.2:-9025293 | MS.gene030216:CDS |
GCAAACATGTAAATTTCAGG+TGG | 0.588739 | 8.2:+9025577 | None:intergenic |
GGTGGTGGAAAATCACTAGT+TGG | 0.601318 | 8.2:-9025454 | MS.gene030216:CDS |
CAATGCTGCTATTGCATGGG+TGG | 0.601494 | 8.2:-9026659 | MS.gene030216:CDS |
TTATCATTGGTGAAGTTGGT+TGG | 0.606188 | 8.2:-9025705 | MS.gene030216:CDS |
CAAACATGTAAATTTCAGGT+GGG | 0.606459 | 8.2:+9025578 | None:intergenic |
GGTAGATGTTAAATGTAAGA+GGG | 0.611599 | 8.2:+9025896 | None:intergenic |
AAATGACAACTACCTTGAGA+AGG | 0.612080 | 8.2:+9025166 | None:intergenic |
GATGTCTACCAAAGTGACAC+TGG | 0.613469 | 8.2:-9026000 | MS.gene030216:CDS |
AAACCACTACAAGAAGAGCC+AGG | 0.623694 | 8.2:+9025304 | None:intergenic |
AAGCAGCCCTTATAAAAGCA+GGG | 0.628845 | 8.2:-9026062 | MS.gene030216:CDS |
GAAGTTGGTTGGCCAACTGA+TGG | 0.629204 | 8.2:-9025694 | MS.gene030216:CDS |
GGCCCATTTGAGAGACATTG+GGG | 0.629502 | 8.2:-9025520 | MS.gene030216:CDS |
AAACATGTAAATTTCAGGTG+GGG | 0.634074 | 8.2:+9025579 | None:intergenic |
TGTCAATGCTGCTATTGCAT+GGG | 0.635182 | 8.2:-9026662 | MS.gene030216:CDS |
GACACTGGTCTTCCATCAGG+TGG | 0.637692 | 8.2:-9025985 | MS.gene030216:CDS |
GTTGTTTGAAGCTGATCCCA+TGG | 0.646484 | 8.2:-9026764 | MS.gene030216:CDS |
GTAGACATCAGCATTTAAAG+GGG | 0.650986 | 8.2:+9026014 | None:intergenic |
CAACTACCTTGAGAAGGTGA+AGG | 0.652284 | 8.2:+9025172 | None:intergenic |
TGGAAGCAAGTGAATCCAAG+AGG | 0.710711 | 8.2:+9026686 | None:intergenic |
TATGGAACCATCAACTACAG+GGG | 0.718530 | 8.2:+9025807 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATATGTATTATCAAAGAA+TGG | - | chr8.2:9026590-9026609 | MS.gene030216:intron | 15.0% |
!!! | AAGTAACATTAATGTTTTAT+TGG | - | chr8.2:9025513-9025532 | MS.gene030216:CDS | 15.0% |
!! | AAAATTTGCATCAAAAACAT+TGG | + | chr8.2:9026067-9026086 | None:intergenic | 20.0% |
!! | AAATTTCTTAGCCAAAATAA+CGG | - | chr8.2:9025922-9025941 | MS.gene030216:CDS | 20.0% |
!! | ATTTGATTATTGACATCATT+TGG | + | chr8.2:9025906-9025925 | None:intergenic | 20.0% |
!! | GAATTAATTGTACAAAACAT+TGG | + | chr8.2:9025669-9025688 | None:intergenic | 20.0% |
!! | TGATTTGACACAAAAAATTA+GGG | - | chr8.2:9025298-9025317 | MS.gene030216:CDS | 20.0% |
!! | TTAAATATTTGCCAAAACAA+TGG | - | chr8.2:9026421-9026440 | MS.gene030216:intron | 20.0% |
!!! | TTGATTTGACACAAAAAATT+AGG | - | chr8.2:9025297-9025316 | MS.gene030216:CDS | 20.0% |
!!! | TTTTAAATCCTCATCTAAAA+GGG | + | chr8.2:9026289-9026308 | None:intergenic | 20.0% |
!!! | TTTTTAAATCCTCATCTAAA+AGG | + | chr8.2:9026290-9026309 | None:intergenic | 20.0% |
! | AAAAACATTGGTGTAAGATA+TGG | + | chr8.2:9026055-9026074 | None:intergenic | 25.0% |
! | AAACGACTTATAATTTGAGA+CGG | - | chr8.2:9025581-9025600 | MS.gene030216:CDS | 25.0% |
! | ATTTCAGCTCTTGAAAAAAA+TGG | - | chr8.2:9026096-9026115 | MS.gene030216:CDS | 25.0% |
! | CAAAGAAAGCAAATTCTTTA+GGG | + | chr8.2:9026002-9026021 | None:intergenic | 25.0% |
! | TCAAAGAAAGCAAATTCTTT+AGG | + | chr8.2:9026003-9026022 | None:intergenic | 25.0% |
! | TTGAGATCATGATTGATATT+GGG | - | chr8.2:9026697-9026716 | MS.gene030216:CDS | 25.0% |
!! | AAAGAATTTGCTTTCTTTGA+TGG | - | chr8.2:9026003-9026022 | MS.gene030216:CDS | 25.0% |
!! | AATTGGATTAGAGTACATAA+TGG | - | chr8.2:9026758-9026777 | MS.gene030216:CDS | 25.0% |
!! | ATGTACTCTAATCCAATTTT+TGG | + | chr8.2:9026756-9026775 | None:intergenic | 25.0% |
!! | TTTGAGATCATGATTGATAT+TGG | - | chr8.2:9026696-9026715 | MS.gene030216:CDS | 25.0% |
!!! | GATTTAAAAAGTATTGATCC+TGG | - | chr8.2:9026300-9026319 | MS.gene030216:intron | 25.0% |
!!! | GCTTTTCTAAAAACATACAA+TGG | - | chr8.2:9025715-9025734 | MS.gene030216:CDS | 25.0% |
AAAGATGCATGTCAATTCAA+TGG | - | chr8.2:9026621-9026640 | MS.gene030216:CDS | 30.0% | |
AATGTTATCATTGGTGAAGT+TGG | - | chr8.2:9026132-9026151 | MS.gene030216:CDS | 30.0% | |
AGTGCTCAAAGATTTAATCA+AGG | - | chr8.2:9026192-9026211 | MS.gene030216:intron | 30.0% | |
ATAAGGATAATAATCTCACG+TGG | - | chr8.2:9025618-9025637 | MS.gene030216:CDS | 30.0% | |
ATGAAATACCCTTTGAATCT+TGG | - | chr8.2:9026366-9026385 | MS.gene030216:intron | 30.0% | |
CTCATACTTTGTGCAAAATT+AGG | + | chr8.2:9026480-9026499 | None:intergenic | 30.0% | |
GATAGAATAGTGAAAAAGCA+AGG | - | chr8.2:9026222-9026241 | MS.gene030216:intron | 30.0% | |
GGTAGATGTTAAATGTAAGA+GGG | + | chr8.2:9025948-9025967 | None:intergenic | 30.0% | |
GGTTCAATGAATGTTATCAT+TGG | - | chr8.2:9026123-9026142 | MS.gene030216:CDS | 30.0% | |
TTCATCTCAAGCAAATGTAA+TGG | - | chr8.2:9026452-9026471 | MS.gene030216:intron | 30.0% | |
! | AAACATGTAAATTTCAGGTG+GGG | + | chr8.2:9026265-9026284 | None:intergenic | 30.0% |
! | ACTTATAATTTGAGACGGAT+GGG | - | chr8.2:9025586-9025605 | MS.gene030216:CDS | 30.0% |
! | CAAACATGTAAATTTCAGGT+GGG | + | chr8.2:9026266-9026285 | None:intergenic | 30.0% |
! | GAAATAACACACCATTGTTT+TGG | + | chr8.2:9026435-9026454 | None:intergenic | 30.0% |
! | GCAAATTCTTTAGGGAAATT+AGG | + | chr8.2:9025994-9026013 | None:intergenic | 30.0% |
! | GCTCTTGAAAAAAATGGTTT+TGG | - | chr8.2:9026102-9026121 | MS.gene030216:CDS | 30.0% |
! | GTTTTGTACAATTAATTCCC+AGG | - | chr8.2:9025671-9025690 | MS.gene030216:CDS | 30.0% |
! | TGGGGAATTTTCAATTTTGA+TGG | - | chr8.2:9026339-9026358 | MS.gene030216:intron | 30.0% |
!! | AACCCCATTTTTAGATATGA+AGG | + | chr8.2:9025223-9025242 | None:intergenic | 30.0% |
!! | CTAAAAATGGGGTTGATATA+AGG | - | chr8.2:9025229-9025248 | MS.gene030216:CDS | 30.0% |
!!! | ATCATTTGGTTTTGAATGTC+TGG | + | chr8.2:9025892-9025911 | None:intergenic | 30.0% |
AAATACCCTTTGAATCTTGG+TGG | - | chr8.2:9026369-9026388 | MS.gene030216:intron | 35.0% | |
AAATGACAACTACCTTGAGA+AGG | + | chr8.2:9026678-9026697 | None:intergenic | 35.0% | |
AGGGCAAACATGTAAATTTC+AGG | + | chr8.2:9026270-9026289 | None:intergenic | 35.0% | |
ATATGGAACCATCAACTACA+GGG | + | chr8.2:9026038-9026057 | None:intergenic | 35.0% | |
CCGCCTTCATATCTAAAAAT+GGG | - | chr8.2:9025217-9025236 | MS.gene030216:CDS | 35.0% | |
CGCCTTCATATCTAAAAATG+GGG | - | chr8.2:9025218-9025237 | MS.gene030216:CDS | 35.0% | |
GCAAACATGTAAATTTCAGG+TGG | + | chr8.2:9026267-9026286 | None:intergenic | 35.0% | |
GGGTAGATGTTAAATGTAAG+AGG | + | chr8.2:9025949-9025968 | None:intergenic | 35.0% | |
GGTAGACATCAGCATTTAAA+GGG | + | chr8.2:9025831-9025850 | None:intergenic | 35.0% | |
GTAGACATCAGCATTTAAAG+GGG | + | chr8.2:9025830-9025849 | None:intergenic | 35.0% | |
GTGAAGCTTATGAAAGACAA+TGG | - | chr8.2:9025039-9025058 | MS.gene030216:CDS | 35.0% | |
TCCGCCTTCATATCTAAAAA+TGG | - | chr8.2:9025216-9025235 | MS.gene030216:CDS | 35.0% | |
TGACCAAGGTAGTAATGAAA+AGG | + | chr8.2:9025276-9025295 | None:intergenic | 35.0% | |
TGGTAGACATCAGCATTTAA+AGG | + | chr8.2:9025832-9025851 | None:intergenic | 35.0% | |
TGTAGTGGTTTAGACACAAA+GGG | - | chr8.2:9026549-9026568 | MS.gene030216:intron | 35.0% | |
TTGTAGTGGTTTAGACACAA+AGG | - | chr8.2:9026548-9026567 | MS.gene030216:intron | 35.0% | |
! | ATATGAAGGCGGAAACATTT+TGG | + | chr8.2:9025209-9025228 | None:intergenic | 35.0% |
! | CTTATAATTTGAGACGGATG+GGG | - | chr8.2:9025587-9025606 | MS.gene030216:CDS | 35.0% |
! | GACTTATAATTTGAGACGGA+TGG | - | chr8.2:9025585-9025604 | MS.gene030216:CDS | 35.0% |
! | TCTTTTGCTGCACCAAAAAT+TGG | - | chr8.2:9026741-9026760 | MS.gene030216:CDS | 35.0% |
! | TTATCATTGGTGAAGTTGGT+TGG | - | chr8.2:9026136-9026155 | MS.gene030216:CDS | 35.0% |
!! | AAATCACTAGTTGGTGCTAA+AGG | - | chr8.2:9026396-9026415 | MS.gene030216:intron | 35.0% |
!! | AATCACTAGTTGGTGCTAAA+GGG | - | chr8.2:9026397-9026416 | MS.gene030216:intron | 35.0% |
!! | CCCATTTTTAGATATGAAGG+CGG | + | chr8.2:9025220-9025239 | None:intergenic | 35.0% |
!!! | GCTTGAATGTTTTTTATGGC+AGG | + | chr8.2:9025763-9025782 | None:intergenic | 35.0% |
!!! | GGCTGCTTGAATGTTTTTTA+TGG | + | chr8.2:9025767-9025786 | None:intergenic | 35.0% |
AAGCAGCCCTTATAAAAGCA+GGG | - | chr8.2:9025779-9025798 | MS.gene030216:CDS | 40.0% | |
AAGTGAATCCAAGAGGTCAT+TGG | + | chr8.2:9025151-9025170 | None:intergenic | 40.0% | |
AGAAGGTGAAGGATCAATGT+TGG | + | chr8.2:9026661-9026680 | None:intergenic | 40.0% | |
AGAGTACATAATGGTCATGC+TGG | - | chr8.2:9026767-9026786 | MS.gene030216:CDS | 40.0% | |
AGTGAATCCAAGAGGTCATT+GGG | + | chr8.2:9025150-9025169 | None:intergenic | 40.0% | |
ATGTCAATGCTGCTATTGCA+TGG | - | chr8.2:9025178-9025197 | MS.gene030216:CDS | 40.0% | |
ATTACCAACTGCAACATACC+TGG | + | chr8.2:9025692-9025711 | None:intergenic | 40.0% | |
ATTCCCCAATGTCTCTCAAA+TGG | + | chr8.2:9026327-9026346 | None:intergenic | 40.0% | |
ATTGATCCTTCACCTTCTCA+AGG | - | chr8.2:9026663-9026682 | MS.gene030216:CDS | 40.0% | |
CAGCATCAAGGCTTAGAAAA+GGG | + | chr8.2:9025969-9025988 | None:intergenic | 40.0% | |
CCAAGGTAGTAATGAAAAGG+AGG | + | chr8.2:9025273-9025292 | None:intergenic | 40.0% | |
GATATGGAACCATCAACTAC+AGG | + | chr8.2:9026039-9026058 | None:intergenic | 40.0% | |
GCATTTGATGTTCCATCAGT+TGG | + | chr8.2:9026162-9026181 | None:intergenic | 40.0% | |
GGAAATTAGGATCAGCATCA+AGG | + | chr8.2:9025981-9026000 | None:intergenic | 40.0% | |
TATGGAACCATCAACTACAG+GGG | + | chr8.2:9026037-9026056 | None:intergenic | 40.0% | |
TCAGCATCAAGGCTTAGAAA+AGG | + | chr8.2:9025970-9025989 | None:intergenic | 40.0% | |
TGTCAATGCTGCTATTGCAT+GGG | - | chr8.2:9025179-9025198 | MS.gene030216:CDS | 40.0% | |
TGTGTCAAATCAAGTGACCA+AGG | + | chr8.2:9025290-9025309 | None:intergenic | 40.0% | |
TTACCAACTGCAACATACCT+GGG | + | chr8.2:9025691-9025710 | None:intergenic | 40.0% | |
TTCCACCACCAAGATTCAAA+GGG | + | chr8.2:9026377-9026396 | None:intergenic | 40.0% | |
TTCCCCAATGTCTCTCAAAT+GGG | + | chr8.2:9026326-9026345 | None:intergenic | 40.0% | |
TTTCCACCACCAAGATTCAA+AGG | + | chr8.2:9026378-9026397 | None:intergenic | 40.0% | |
! | ATGTAAATTTCAGGTGGGGT+AGG | + | chr8.2:9026261-9026280 | None:intergenic | 40.0% |
! | ATGTAAGAGGGCCGTTATTT+TGG | + | chr8.2:9025936-9025955 | None:intergenic | 40.0% |
! | CATGTTTGCCCTTTTAGATG+AGG | - | chr8.2:9026278-9026297 | MS.gene030216:intron | 40.0% |
! | CCTCCTTTTCATTACTACCT+TGG | - | chr8.2:9025270-9025289 | MS.gene030216:CDS | 40.0% |
! | CGGATGGGGTACTTATTATA+AGG | - | chr8.2:9025601-9025620 | MS.gene030216:CDS | 40.0% |
! | GAATTCTGGCATTCAGGTTA+TGG | - | chr8.2:9025116-9025135 | MS.gene030216:CDS | 40.0% |
!! | ATCACTAGTTGGTGCTAAAG+GGG | - | chr8.2:9026398-9026417 | MS.gene030216:intron | 40.0% |
!! | GCCTAACCCTGCTTTTATAA+GGG | + | chr8.2:9025788-9025807 | None:intergenic | 40.0% |
!! | TGCAATAGCAGCATTGACAT+TGG | + | chr8.2:9025178-9025197 | None:intergenic | 40.0% |
!! | TGCCTAACCCTGCTTTTATA+AGG | + | chr8.2:9025789-9025808 | None:intergenic | 40.0% |
!! | TTTTGGTGCAGCAAAAGAAG+TGG | + | chr8.2:9026739-9026758 | None:intergenic | 40.0% |
AAACCACTACAAGAAGAGCC+AGG | + | chr8.2:9026540-9026559 | None:intergenic | 45.0% | |
ATTCCCAGGTATGTTGCAGT+TGG | - | chr8.2:9025685-9025704 | MS.gene030216:CDS | 45.0% | |
CAACTACCTTGAGAAGGTGA+AGG | + | chr8.2:9026672-9026691 | None:intergenic | 45.0% | |
CAAGCAGCCCTTATAAAAGC+AGG | - | chr8.2:9025778-9025797 | MS.gene030216:CDS | 45.0% | |
GATGTCTACCAAAGTGACAC+TGG | - | chr8.2:9025841-9025860 | MS.gene030216:CDS | 45.0% | |
GATTGTACATCTCTTGCTCC+TGG | - | chr8.2:9026519-9026538 | MS.gene030216:intron | 45.0% | |
GCCCTTATAAAAGCAGGGTT+AGG | - | chr8.2:9025784-9025803 | MS.gene030216:CDS | 45.0% | |
TACCCTTTGAATCTTGGTGG+TGG | - | chr8.2:9026372-9026391 | MS.gene030216:intron | 45.0% | |
TCTTGGGAATTCTGGCATTC+AGG | - | chr8.2:9025110-9025129 | MS.gene030216:CDS | 45.0% | |
TGGAAGCAAGTGAATCCAAG+AGG | + | chr8.2:9025158-9025177 | None:intergenic | 45.0% | |
TGGCCCATTTGAGAGACATT+GGG | - | chr8.2:9026320-9026339 | MS.gene030216:intron | 45.0% | |
! | GTTGTTTGAAGCTGATCCCA+TGG | - | chr8.2:9025077-9025096 | MS.gene030216:CDS | 45.0% |
! | TCTGGCATTCAGGTTATGGT+TGG | - | chr8.2:9025120-9025139 | MS.gene030216:CDS | 45.0% |
!! | ATGGAAGACCAGTGTCACTT+TGG | + | chr8.2:9025852-9025871 | None:intergenic | 45.0% |
!! | GGTGGTGGAAAATCACTAGT+TGG | - | chr8.2:9026387-9026406 | MS.gene030216:intron | 45.0% |
CAATGCTGCTATTGCATGGG+TGG | - | chr8.2:9025182-9025201 | MS.gene030216:CDS | 50.0% | |
CAATGTCTCTCAAATGGGCC+AGG | + | chr8.2:9026321-9026340 | None:intergenic | 50.0% | |
CTGAAGGCTCTTGGGAATTC+TGG | - | chr8.2:9025102-9025121 | MS.gene030216:CDS | 50.0% | |
CTGGCCCATTTGAGAGACAT+TGG | - | chr8.2:9026319-9026338 | MS.gene030216:intron | 50.0% | |
GGCCCATTTGAGAGACATTG+GGG | - | chr8.2:9026321-9026340 | MS.gene030216:intron | 50.0% | |
TGGCATACCCAATGACCTCT+TGG | - | chr8.2:9025140-9025159 | MS.gene030216:CDS | 50.0% | |
! | GAAGTTGGTTGGCCAACTGA+TGG | - | chr8.2:9026147-9026166 | MS.gene030216:CDS | 50.0% |
! | GGTCTAAAGTGTCCACCTGA+TGG | + | chr8.2:9025871-9025890 | None:intergenic | 50.0% |
! | TCAGGTGGGGTAGGTCTTTT+AGG | + | chr8.2:9026252-9026271 | None:intergenic | 50.0% |
!! | AGTGACACTGGTCTTCCATC+AGG | - | chr8.2:9025853-9025872 | MS.gene030216:CDS | 50.0% |
CCAAGAGCCTTCAGTGCCAT+GGG | + | chr8.2:9025096-9025115 | None:intergenic | 55.0% | |
TCTGCTGCCCCTGTAGTTGA+TGG | - | chr8.2:9026027-9026046 | MS.gene030216:CDS | 55.0% | |
! | AGCTGATCCCATGGCACTGA+AGG | - | chr8.2:9025086-9025105 | MS.gene030216:CDS | 55.0% |
! | CCATGGCACTGAAGGCTCTT+GGG | - | chr8.2:9025094-9025113 | MS.gene030216:CDS | 55.0% |
! | GCTCCTGGCTCTTCTTGTAG+TGG | - | chr8.2:9026534-9026553 | MS.gene030216:intron | 55.0% |
!! | GACACTGGTCTTCCATCAGG+TGG | - | chr8.2:9025856-9025875 | MS.gene030216:CDS | 55.0% |
CCCAAGAGCCTTCAGTGCCA+TGG | + | chr8.2:9025097-9025116 | None:intergenic | 60.0% | |
! | CCCATGGCACTGAAGGCTCT+TGG | - | chr8.2:9025093-9025112 | MS.gene030216:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 9025036 | 9026827 | 9025036 | ID=MS.gene030216 |
chr8.2 | mRNA | 9025036 | 9026827 | 9025036 | ID=MS.gene030216.t1;Parent=MS.gene030216 |
chr8.2 | exon | 9026613 | 9026827 | 9026613 | ID=MS.gene030216.t1.exon1;Parent=MS.gene030216.t1 |
chr8.2 | CDS | 9026613 | 9026827 | 9026613 | ID=cds.MS.gene030216.t1;Parent=MS.gene030216.t1 |
chr8.2 | exon | 9025036 | 9026170 | 9025036 | ID=MS.gene030216.t1.exon2;Parent=MS.gene030216.t1 |
chr8.2 | CDS | 9025036 | 9026170 | 9025036 | ID=cds.MS.gene030216.t1;Parent=MS.gene030216.t1 |
Gene Sequence |
Protein sequence |