AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene028826

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028826.t1 MTR_2g091135 94.907 648 21 1 1 636 1 648 0.0 1254
MS.gene028826.t1 MTR_2g091135 94.781 594 19 1 1 582 1 594 0.0 1132
MS.gene028826.t1 MTR_2g091130 93.344 601 39 1 1 600 1 601 0.0 1122
MS.gene028826.t1 MTR_4g079650 63.252 449 128 8 135 581 497 910 1.42e-176 527
MS.gene028826.t1 MTR_4g079650 63.252 449 128 8 135 581 497 910 1.69e-176 527
MS.gene028826.t1 MTR_4g079650 66.756 373 116 5 135 505 497 863 1.17e-161 485
MS.gene028826.t1 MTR_4g092900 35.506 445 170 10 139 548 63 425 1.90e-66 226
MS.gene028826.t1 MTR_4g092900 35.601 441 167 10 143 548 67 425 2.26e-66 227
MS.gene028826.t1 MTR_4g092880 39.939 328 118 9 253 548 121 401 1.01e-55 197
MS.gene028826.t1 MTR_3g075040 39.844 256 125 4 296 548 207 436 7.55e-49 181
MS.gene028826.t1 MTR_3g075040 39.844 256 125 4 296 548 207 436 2.70e-48 181
MS.gene028826.t1 MTR_4g092880 39.700 267 106 8 253 487 121 364 3.93e-41 154
MS.gene028826.t1 MTR_0018s0090 58.095 105 44 0 293 397 195 299 2.16e-36 145
MS.gene028826.t1 MTR_0018s0090 47.260 146 70 2 293 437 195 334 3.31e-36 145
MS.gene028826.t1 MTR_2g018270 56.190 105 46 0 299 403 83 187 1.78e-34 138
MS.gene028826.t1 MTR_6g033375 32.068 237 140 4 302 534 75 294 1.14e-27 114
MS.gene028826.t1 MTR_8g070660 29.268 246 155 4 292 534 90 319 1.44e-26 112
MS.gene028826.t1 MTR_8g070660 44.444 108 57 1 292 396 90 197 3.37e-25 106
MS.gene028826.t1 MTR_5g069490 32.328 232 124 5 308 536 111 312 2.68e-23 102
MS.gene028826.t1 MTR_2g437920 45.977 87 44 1 310 393 146 232 1.76e-16 82.0
MS.gene028826.t1 MTR_6g045290 27.907 215 124 5 332 536 79 272 3.09e-13 72.8
MS.gene028826.t1 MTR_2g005820 38.298 94 57 1 302 394 202 295 4.10e-12 69.7
MS.gene028826.t1 MTR_0662s0020 32.743 113 67 4 299 405 138 247 9.82e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028826.t1 AT1G06230 60.991 464 164 9 143 595 272 729 1.48e-163 487
MS.gene028826.t1 AT1G06230 60.991 464 164 9 143 595 272 729 1.48e-163 487
MS.gene028826.t1 AT1G06230 60.991 464 164 9 143 595 272 729 1.48e-163 487
MS.gene028826.t1 AT1G06230 60.991 464 164 9 143 595 272 729 1.48e-163 487
MS.gene028826.t1 AT1G73150 49.051 316 133 6 262 558 86 392 9.98e-83 267
MS.gene028826.t1 AT1G73150 49.051 316 133 6 262 558 86 392 2.76e-82 267
MS.gene028826.t1 AT1G17790 44.762 315 137 7 286 573 122 426 3.04e-71 238
MS.gene028826.t1 AT5G14270 36.882 263 130 6 292 549 134 365 3.37e-42 162
MS.gene028826.t1 AT5G14270 36.882 263 130 6 292 549 134 365 3.37e-42 162
MS.gene028826.t1 AT5G14270 36.882 263 130 6 292 549 134 365 3.60e-42 162
MS.gene028826.t1 AT3G27260 40.562 249 114 8 295 536 176 397 1.08e-41 161
MS.gene028826.t1 AT3G27260 40.562 249 114 8 295 536 176 397 2.04e-41 161
MS.gene028826.t1 AT3G27260 40.161 249 115 8 295 536 176 397 2.08e-41 161
MS.gene028826.t1 AT3G27260 40.562 249 114 8 295 536 127 348 2.47e-41 160
MS.gene028826.t1 AT3G01770 38.912 239 110 5 296 530 130 336 4.87e-39 150
MS.gene028826.t1 AT3G01770 38.136 236 116 5 296 530 130 336 1.50e-38 151
MS.gene028826.t1 AT5G63320 35.271 258 134 5 292 543 158 388 1.69e-35 140
MS.gene028826.t1 AT5G63320 35.271 258 134 5 292 543 158 388 1.69e-35 140
MS.gene028826.t1 AT5G63320 35.659 258 133 6 292 543 158 388 2.29e-35 143
MS.gene028826.t1 AT5G65630 61.000 100 39 0 291 390 165 264 3.71e-33 135
MS.gene028826.t1 AT5G65630 52.830 106 49 1 443 548 374 478 2.00e-26 114
MS.gene028826.t1 AT2G34900 30.545 275 171 4 269 543 88 342 3.91e-32 129
MS.gene028826.t1 AT2G34900 31.452 248 154 3 296 543 1 232 4.21e-32 125
MS.gene028826.t1 AT5G10550 59.000 100 41 0 291 390 170 269 8.29e-32 130
MS.gene028826.t1 AT5G10550 54.167 96 44 0 453 548 378 473 1.72e-24 108
MS.gene028826.t1 AT5G46550 54.737 95 43 0 299 393 73 167 2.67e-28 119
MS.gene028826.t1 AT3G52280 28.395 243 153 4 296 534 95 320 7.98e-24 104
MS.gene028826.t1 AT3G52280 28.395 243 153 4 296 534 112 337 9.48e-24 104

Find 176 sgRNAs with CRISPR-Local

Find 201 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAGAAAGACTCATGCTTTC+CGG 0.233514 2.3:-9198739 MS.gene028826:CDS
ACATGAACATCTTGCCCTTT+AGG 0.234304 2.3:+9198884 None:intergenic
GGAGAAATGGGACATGGATT+TGG 0.255723 2.3:-9199154 MS.gene028826:CDS
ATGAGGTATGGCGTGGATTA+TGG 0.256517 2.3:-9198791 MS.gene028826:CDS
CGGTGAGGTCTTTGGTGATT+AGG 0.271715 2.3:-9199510 MS.gene028826:CDS
CTAACACCATTACACTTAAC+TGG 0.281372 2.3:+9199335 None:intergenic
CGAGTCAAGCTCATGGGATT+TGG 0.293666 2.3:+9198662 None:intergenic
TCAGCAGTTGGATAGTGTTT+TGG 0.293996 2.3:-9199797 MS.gene028826:CDS
CTCCGCCAGTTGTGAATTCT+AGG 0.296493 2.3:-9199753 MS.gene028826:CDS
GTTGTTCCTCATACTCATTC+TGG 0.307616 2.3:-9199880 MS.gene028826:CDS
ATGTGTCTGTGGATTGTTAT+AGG 0.323917 2.3:-9199441 MS.gene028826:CDS
GAGAAATGGGACATGGATTT+GGG 0.327055 2.3:-9199153 MS.gene028826:CDS
GTGTGGATGCAGAGACTCTT+TGG 0.328188 2.3:-9198439 MS.gene028826:CDS
CAACTATAACTGGTGGTTCT+TGG 0.330269 2.3:+9198224 None:intergenic
ACAATAGCATCTAGTTTATC+AGG 0.330645 2.3:+9198530 None:intergenic
CCTTGAAACGGTGAGGTCTT+TGG 0.332395 2.3:-9199518 MS.gene028826:CDS
AGCAGCTCAAGCAGTGATTC+TGG 0.334206 2.3:-9198008 MS.gene028826:CDS
GTGTTCGGAGAGAGGCTAAT+AGG 0.342337 2.3:-9199366 MS.gene028826:CDS
CGCAAGCAAGAATTCCGAAT+TGG 0.349984 2.3:+9199243 None:intergenic
TCGGCGTCCGGGTCTGATGC+AGG 0.368917 2.3:-9197848 MS.gene028826:CDS
GATTGTTATAGGGTTGATAA+TGG 0.373194 2.3:-9199430 MS.gene028826:CDS
CTCGGGGCCTCAACTATAAC+TGG 0.375349 2.3:+9198214 None:intergenic
TTCAATTTCGTCATCATGTT+GGG 0.377251 2.3:+9198475 None:intergenic
GGCTCCGGAGGATGGGAATT+CGG 0.378060 2.3:-9199776 MS.gene028826:CDS
GGGGAAATTCGAGTAGATAA+TGG 0.378135 2.3:-9198050 MS.gene028826:CDS
TGAGGTATGGCGTGGATTAT+GGG 0.383110 2.3:-9198790 MS.gene028826:CDS
CATCTCACATCCGATGGACT+TGG 0.390431 2.3:-9199005 MS.gene028826:CDS
GAAGCATGGCGTTGGAGAAA+TGG 0.393841 2.3:-9199167 MS.gene028826:CDS
AGTGATAGCTCCTCGGCGTC+CGG 0.402526 2.3:-9197860 MS.gene028826:CDS
ATTGTTATAGGGTTGATAAT+GGG 0.406718 2.3:-9199429 MS.gene028826:CDS
TACCTGCTTGTCTTTCTCTC+GGG 0.411814 2.3:+9198197 None:intergenic
CAACGGATGGCTGGGAGGTA+TGG 0.413417 2.3:-9199475 MS.gene028826:CDS
TGTGTCTGTGGATTGTTATA+GGG 0.414695 2.3:-9199440 MS.gene028826:CDS
ACATCCTCCGCAAACTCCTT+TGG 0.418265 2.3:+9198941 None:intergenic
GAAGAGAAACAACGGATGGC+TGG 0.423094 2.3:-9199484 MS.gene028826:CDS
ATACCTGCTTGTCTTTCTCT+CGG 0.424151 2.3:+9198196 None:intergenic
GACTTCTTGTTACTCTCAGC+AGG 0.426666 2.3:+9199205 None:intergenic
GAATAGAACTGGTTCGCCTT+AGG 0.428319 2.3:+9199265 None:intergenic
GGAGGATAAAGTTAATTCCT+TGG 0.435615 2.3:-9199905 MS.gene028826:CDS
ATTCCGAATTGGAATAGAAC+TGG 0.439085 2.3:+9199254 None:intergenic
CAGCATTATTCGAGGAAAGA+TGG 0.443395 2.3:-9198844 MS.gene028826:CDS
GGGAAATTCGAGTAGATAAT+GGG 0.444542 2.3:-9198049 MS.gene028826:CDS
ACCGCCACAGTCACTGTTGA+TGG 0.445839 2.3:-9199850 MS.gene028826:CDS
CCATGACATATAATCCTAAA+GGG 0.451805 2.3:-9198898 MS.gene028826:CDS
GATCATTAAGAAACAAAATT+CGG 0.453860 2.3:-9198504 MS.gene028826:CDS
CTTCAATTTCGTCATCATGT+TGG 0.459358 2.3:+9198474 None:intergenic
CACTCTGAGGTAGCTTCTGC+AGG 0.459504 2.3:-9199388 MS.gene028826:CDS
AAGCATGGCGTTGGAGAAAT+GGG 0.460416 2.3:-9199166 MS.gene028826:CDS
GCCATGACATATAATCCTAA+AGG 0.461758 2.3:-9198899 MS.gene028826:CDS
AAGAGATGCGGGAGATTAAG+AGG 0.463397 2.3:-9199555 MS.gene028826:CDS
TCCCCTTGCACAGGCAAGGA+TGG 0.467964 2.3:+9198068 None:intergenic
TAGTCTTGATGTTGTTCAGC+TGG 0.468758 2.3:-9199674 MS.gene028826:CDS
GATAAGAAGGGGTTGGAGAA+TGG 0.469340 2.3:-9199610 MS.gene028826:CDS
TACACGCCAGTTAAGTGTAA+TGG 0.471994 2.3:-9199341 MS.gene028826:CDS
TTGATGGGACGAAGGATAAC+GGG 0.473241 2.3:-9199834 MS.gene028826:CDS
CCCCTTGCACAGGCAAGGAT+GGG 0.474347 2.3:+9198069 None:intergenic
TTATCGTCACATCTTAAAGC+TGG 0.477773 2.3:+9199628 None:intergenic
CCCTTTAGGATTATATGTCA+TGG 0.480279 2.3:+9198898 None:intergenic
AGGTAGCTTCTGCAGGTGTT+CGG 0.482162 2.3:-9199381 MS.gene028826:CDS
TTATCCGGATCGTTTGCCTT+CGG 0.482533 2.3:+9198611 None:intergenic
TTTAAGATGTGACGATAAGA+AGG 0.482700 2.3:-9199623 MS.gene028826:CDS
AAAGCCGAAGGCAAACGATC+CGG 0.484204 2.3:-9198615 MS.gene028826:CDS
GAACCAGTTCTATTCCAATT+CGG 0.484886 2.3:-9199257 MS.gene028826:CDS
TGTGGATGCAGAGACTCTTT+GGG 0.487754 2.3:-9198438 MS.gene028826:CDS
GAGATTAAGAGGAAGCTTGA+GGG 0.487765 2.3:-9199544 MS.gene028826:CDS
TATAGGGTTGATAATGGGAG+TGG 0.488481 2.3:-9199424 MS.gene028826:CDS
CCAGTGGATGTTGAACGTCT+TGG 0.491052 2.3:-9199049 MS.gene028826:CDS
GTCAAGCTCATGGGATTTGG+AGG 0.494301 2.3:+9198665 None:intergenic
TCTAGCTTGAATAGCAAGTT+CGG 0.494718 2.3:+9198358 None:intergenic
GTCGAGTTTGTATCGTAAGC+AGG 0.496356 2.3:-9199707 MS.gene028826:CDS
AGTCGAGGCTGAGCAAGAAT+TGG 0.497693 2.3:-9198973 MS.gene028826:CDS
TTGGAGAATGGTGTTAAGAA+TGG 0.503549 2.3:-9199598 MS.gene028826:CDS
TTAAGAATGGACTGGCTTCA+CGG 0.503952 2.3:-9199585 MS.gene028826:CDS
ATTGTAATGTGACTCTATAA+TGG 0.505035 2.3:+9198820 None:intergenic
TAATGTTTCTGCTCAGCAGT+TGG 0.506764 2.3:-9199809 MS.gene028826:CDS
CCCTTGCACAGGCAAGGATG+GGG 0.511507 2.3:+9198070 None:intergenic
TCCAACCTAGAATTCACAAC+TGG 0.516769 2.3:+9199748 None:intergenic
CATGGAAAGAAGCATGGCGT+TGG 0.520162 2.3:-9199175 MS.gene028826:CDS
GTGATAGCTCCTCGGCGTCC+GGG 0.521986 2.3:-9197859 MS.gene028826:CDS
CCAAAGACCTCACCGTTTCA+AGG 0.522247 2.3:+9199518 None:intergenic
GTTGATGGGACGAAGGATAA+CGG 0.523599 2.3:-9199835 MS.gene028826:CDS
GCCAGTTGTGAATTCTAGGT+TGG 0.525168 2.3:-9199749 MS.gene028826:CDS
AGCATTATTCGAGGAAAGAT+GGG 0.527838 2.3:-9198843 MS.gene028826:CDS
AGTGTAATGGTGTTAGAGAA+TGG 0.529484 2.3:-9199328 MS.gene028826:CDS
TGATGAAACACAAGCACGGT+TGG 0.531315 2.3:-9199084 MS.gene028826:CDS
CCCATCCTTGCCTGTGCAAG+GGG 0.531370 2.3:-9198069 MS.gene028826:CDS
ACGGTCAAAGCAAGAGATGC+GGG 0.533396 2.3:-9199566 MS.gene028826:CDS
GCCCCGAGAGAAAGACAAGC+AGG 0.535875 2.3:-9198199 MS.gene028826:intron
CCCCATCCTTGCCTGTGCAA+GGG 0.536347 2.3:-9198070 MS.gene028826:CDS
AAGAGAAACAACGGATGGCT+GGG 0.537737 2.3:-9199483 MS.gene028826:CDS
CAAATCACCAAAGGAGTTTG+CGG 0.541456 2.3:-9198948 MS.gene028826:CDS
TACAATCATGAGATGAGGTA+TGG 0.542192 2.3:-9198803 MS.gene028826:CDS
ATCAACAGTGACTGTGGCGG+TGG 0.543115 2.3:+9199852 None:intergenic
GATGAAACACAAGCACGGTT+GGG 0.544423 2.3:-9199083 MS.gene028826:CDS
CGGCGTCCGGGTCTGATGCA+GGG 0.544623 2.3:-9197847 MS.gene028826:CDS
AGGGCAAGATGTTCATGTAA+TGG 0.545167 2.3:-9198879 MS.gene028826:CDS
TCATGTCAAGAGGTGGTGGC+CGG 0.545589 2.3:+9198720 None:intergenic
ATGTGACGATAAGAAGGGGT+TGG 0.545752 2.3:-9199617 MS.gene028826:CDS
CCAAGACGTTCAACATCCAC+TGG 0.547510 2.3:+9199049 None:intergenic
GGGGACTGTAGTTGAAGATA+AGG 0.547595 2.3:-9199992 MS.gene028826:CDS
AATTTCCCCTTGCACAGGCA+AGG 0.547685 2.3:+9198064 None:intergenic
ACTCGAATTTCCCCTTGCAC+AGG 0.550360 2.3:+9198059 None:intergenic
GATGTTGTTCAGCTGGAAGA+TGG 0.557828 2.3:-9199667 MS.gene028826:CDS
ATCTCACATCCGATGGACTT+GGG 0.558638 2.3:-9199004 MS.gene028826:CDS
GGTTAGTGAAAGTGTTGAGA+AGG 0.559698 2.3:-9199299 MS.gene028826:CDS
ACCTGCTTGTCTTTCTCTCG+GGG 0.559840 2.3:+9198198 None:intergenic
CCGCCACAGTCACTGTTGAT+GGG 0.560509 2.3:-9199849 MS.gene028826:CDS
GCTTGAGGGCGACCTTGAAA+CGG 0.560792 2.3:-9199530 MS.gene028826:CDS
CACCACCTCTTGACATGAGA+AGG 0.560962 2.3:-9198715 MS.gene028826:CDS
AGGTGAAGGTGCAGAAATCG+CGG 0.564222 2.3:+9198766 None:intergenic
TATTATCATCTCACATCCGA+TGG 0.564977 2.3:-9199011 MS.gene028826:CDS
CGGATGGCTGGGAGGTATGG+TGG 0.565095 2.3:-9199472 MS.gene028826:CDS
AAAGTTTGAGCAAATACAAG+AGG 0.565822 2.3:-9198385 MS.gene028826:CDS
GTAGCACCAGAATGAGTATG+AGG 0.566136 2.3:+9199874 None:intergenic
TTCTGATAGTGATAGCTCCT+CGG 0.567271 2.3:-9197867 MS.gene028826:CDS
AGCTGAACGAGTCAAGCTCA+TGG 0.568868 2.3:+9198655 None:intergenic
GGAGCCGAATTCCCATCCTC+CGG 0.570922 2.3:+9199772 None:intergenic
CTTCTCATGTCAAGAGGTGG+TGG 0.571582 2.3:+9198716 None:intergenic
TTAAGATGTGACGATAAGAA+GGG 0.571812 2.3:-9199622 MS.gene028826:CDS
ACATGATGACGAAATTGAAG+TGG 0.579909 2.3:-9198471 MS.gene028826:CDS
TTCTGCAGGTGTTCGGAGAG+AGG 0.581200 2.3:-9199374 MS.gene028826:CDS
TGGTGGTTTGAATGTGTCTG+TGG 0.581724 2.3:-9199452 MS.gene028826:CDS
ATGTGACCCTGCATCAGACC+CGG 0.584453 2.3:+9197841 None:intergenic
TGTGAATTCTAGGTTGGACG+TGG 0.587021 2.3:-9199743 MS.gene028826:CDS
GTCTTTCTAGACAGAGGTGA+AGG 0.587573 2.3:+9198752 None:intergenic
TGAAGTGGACATTGATAGTG+TGG 0.589368 2.3:-9198456 MS.gene028826:CDS
GCTGAACGAGTCAAGCTCAT+GGG 0.590216 2.3:+9198656 None:intergenic
TGGTGTTAGAGAATGGTCAC+GGG 0.593335 2.3:-9199321 MS.gene028826:CDS
AGATGTTCATGTAATGGCGG+AGG 0.593716 2.3:-9198873 MS.gene028826:CDS
ATGGTGTTAGAGAATGGTCA+CGG 0.594200 2.3:-9199322 MS.gene028826:CDS
TGAGCGAATTGCCCAGCAGA+AGG 0.599288 2.3:-9198327 MS.gene028826:intron
GGTGAAGGTGCAGAAATCGC+GGG 0.600461 2.3:+9198767 None:intergenic
GAAGGAGAAGAGAACACCTA+AGG 0.603536 2.3:-9199281 MS.gene028826:CDS
GGAGATTAAGAGGAAGCTTG+AGG 0.608055 2.3:-9199545 MS.gene028826:CDS
GATTCTGGCTCTTCATCAAG+TGG 0.609326 2.3:-9197993 MS.gene028826:intron
CACGGTCAAAGCAAGAGATG+CGG 0.609503 2.3:-9199567 MS.gene028826:CDS
AACCTAGAATTCACAACTGG+CGG 0.610102 2.3:+9199751 None:intergenic
GAGATACAAAGATACTCGGA+GGG 0.610462 2.3:-9199961 MS.gene028826:CDS
GGCGTTGGAGAAATGGGACA+TGG 0.610803 2.3:-9199160 MS.gene028826:CDS
GGAGCTATCAGCATTATTCG+AGG 0.611908 2.3:-9198852 MS.gene028826:CDS
CACATTACAATCATGAGATG+AGG 0.614532 2.3:-9198808 MS.gene028826:CDS
TTCACAGTACCCAAGTCCAT+CGG 0.615883 2.3:+9198995 None:intergenic
CGTCCCATCAACAGTGACTG+TGG 0.618620 2.3:+9199846 None:intergenic
AGTATGAGGAACAACTTCCA+AGG 0.625080 2.3:+9199888 None:intergenic
ATCCTTCTCATGTCAAGAGG+TGG 0.625638 2.3:+9198713 None:intergenic
TTTGAGCAAATACAAGAGGA+AGG 0.629083 2.3:-9198381 MS.gene028826:CDS
TCATGAGATGAGGTATGGCG+TGG 0.630419 2.3:-9198798 MS.gene028826:CDS
TGCATCAGACCCGGACGCCG+AGG 0.630733 2.3:+9197850 None:intergenic
TCAATCCTTCTCATGTCAAG+AGG 0.631076 2.3:+9198710 None:intergenic
TTGGGTGTTTAATACTCCAG+TGG 0.632618 2.3:-9199065 MS.gene028826:CDS
AAATCACATGGAAAGAAGCA+TGG 0.633912 2.3:-9199181 MS.gene028826:CDS
CCTTGCACAGGCAAGGATGG+GGG 0.638520 2.3:+9198071 None:intergenic
AACAAGAAGTCAAAATCACA+TGG 0.638541 2.3:-9199193 MS.gene028826:CDS
AGCTAAGCGCGCTCACTCTG+AGG 0.640148 2.3:-9199401 MS.gene028826:CDS
TAAAGAGATACAAAGATACT+CGG 0.640359 2.3:-9199965 MS.gene028826:CDS
TAAGATGTGACGATAAGAAG+GGG 0.650485 2.3:-9199621 MS.gene028826:CDS
TTCTTGTTACTCTCAGCAGG+CGG 0.655387 2.3:+9199208 None:intergenic
ATGGCTGGGAGGTATGGTGG+TGG 0.655927 2.3:-9199469 MS.gene028826:CDS
GCATGAGTCTTTCTAGACAG+AGG 0.658883 2.3:+9198746 None:intergenic
CCCATCAACAGTGACTGTGG+CGG 0.662429 2.3:+9199849 None:intergenic
GGGGCCTCAACTATAACTGG+TGG 0.663312 2.3:+9198217 None:intergenic
GAATGGTGTTAAGAATGGAC+TGG 0.666740 2.3:-9199593 MS.gene028826:CDS
GCAAGATGTTCATGTAATGG+CGG 0.668019 2.3:-9198876 MS.gene028826:CDS
AGAGATACAAAGATACTCGG+AGG 0.670086 2.3:-9199962 MS.gene028826:CDS
AGAACCACCAGTTATAGTTG+AGG 0.671032 2.3:-9198221 MS.gene028826:CDS
ATCACCAAAGGAGTTTGCGG+AGG 0.671626 2.3:-9198945 MS.gene028826:CDS
GATTGAAGAGAAACAACGGA+TGG 0.679746 2.3:-9199488 MS.gene028826:CDS
ATAGCATCTAGTTTATCAGG+TGG 0.681272 2.3:+9198533 None:intergenic
AGGGCGACCTTGAAACGGTG+AGG 0.686080 2.3:-9199525 MS.gene028826:CDS
GAATTGGTACAAATCACCAA+AGG 0.690101 2.3:-9198957 MS.gene028826:CDS
AGTCACTGTTGATGGGACGA+AGG 0.691119 2.3:-9199842 MS.gene028826:CDS
AGAAACAACGGATGGCTGGG+AGG 0.697772 2.3:-9199480 MS.gene028826:CDS
AAGTTGATGAAACACAAGCA+CGG 0.699310 2.3:-9199088 MS.gene028826:CDS
TTAGGATTGAAGAGAAACAA+CGG 0.702409 2.3:-9199492 MS.gene028826:CDS
ACTTGGGTACTGTGAAGTCG+AGG 0.713645 2.3:-9198988 MS.gene028826:CDS
GGTGTTAGAGAATGGTCACG+GGG 0.773902 2.3:-9199320 MS.gene028826:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTGTATAACCATAAATTAT+GGG + chr2.3:9199902-9199921 None:intergenic 20.0%
!! GAGAAAAAATTTCAAAGTTT+CGG - chr2.3:9197912-9197931 MS.gene028826:intron 20.0%
!! GATCATTAAGAAACAAAATT+CGG - chr2.3:9199334-9199353 MS.gene028826:CDS 20.0%
! AAAAAATTTCAAAGTTTCGG+AGG - chr2.3:9197915-9197934 MS.gene028826:intron 25.0%
! ATTGTAATGTGACTCTATAA+TGG + chr2.3:9199021-9199040 None:intergenic 25.0%
! CCATAATTTATGGTTATACA+AGG - chr2.3:9199900-9199919 MS.gene028826:CDS 25.0%
! CCTTGTATAACCATAAATTA+TGG + chr2.3:9199903-9199922 None:intergenic 25.0%
! TAAAGAGATACAAAGATACT+CGG - chr2.3:9197873-9197892 MS.gene028826:intron 25.0%
! TATATCTGTCCCATAATTTA+TGG - chr2.3:9199890-9199909 MS.gene028826:CDS 25.0%
!!! ATTGTTATAGGGTTGATAAT+GGG - chr2.3:9198409-9198428 MS.gene028826:CDS 25.0%
AAAGTTTGAGCAAATACAAG+AGG - chr2.3:9199453-9199472 MS.gene028826:CDS 30.0%
AACAAGAAGTCAAAATCACA+TGG - chr2.3:9198645-9198664 MS.gene028826:CDS 30.0%
CCATGACATATAATCCTAAA+GGG - chr2.3:9198940-9198959 MS.gene028826:CDS 30.0%
TGTCTGATATTAATGTGCTT+TGG - chr2.3:9199944-9199963 MS.gene028826:CDS 30.0%
TTAAGATGTGACGATAAGAA+GGG - chr2.3:9198216-9198235 MS.gene028826:CDS 30.0%
TTAGGATTGAAGAGAAACAA+CGG - chr2.3:9198346-9198365 MS.gene028826:CDS 30.0%
TTCAATTTCGTCATCATGTT+GGG + chr2.3:9199366-9199385 None:intergenic 30.0%
! ACAATAGCATCTAGTTTATC+AGG + chr2.3:9199311-9199330 None:intergenic 30.0%
! GCTCAAACTTTTCTTATAGT+TGG + chr2.3:9199444-9199463 None:intergenic 30.0%
! TATGTCATGTCTCTTTTATC+CGG + chr2.3:9199245-9199264 None:intergenic 30.0%
! TTTAAGATGTGACGATAAGA+AGG - chr2.3:9198215-9198234 MS.gene028826:CDS 30.0%
!! GATTGTTATAGGGTTGATAA+TGG - chr2.3:9198408-9198427 MS.gene028826:CDS 30.0%
AAATCACATGGAAAGAAGCA+TGG - chr2.3:9198657-9198676 MS.gene028826:CDS 35.0%
AGCATTATTCGAGGAAAGAT+GGG - chr2.3:9198995-9199014 MS.gene028826:CDS 35.0%
ATTCCGAATTGGAATAGAAC+TGG + chr2.3:9198587-9198606 None:intergenic 35.0%
CAACAATAATAGTCCACAAG+CGG + chr2.3:9199670-9199689 None:intergenic 35.0%
CACATTACAATCATGAGATG+AGG - chr2.3:9199030-9199049 MS.gene028826:CDS 35.0%
CAGACATTAAAGTATAAGCG+AGG + chr2.3:9199930-9199949 None:intergenic 35.0%
CTAACACCATTACACTTAAC+TGG + chr2.3:9198506-9198525 None:intergenic 35.0%
CTTCAATTTCGTCATCATGT+TGG + chr2.3:9199367-9199386 None:intergenic 35.0%
GAACCAGTTCTATTCCAATT+CGG - chr2.3:9198581-9198600 MS.gene028826:CDS 35.0%
GAATTGGTACAAATCACCAA+AGG - chr2.3:9198881-9198900 MS.gene028826:CDS 35.0%
GCCATGACATATAATCCTAA+AGG - chr2.3:9198939-9198958 MS.gene028826:CDS 35.0%
GGAGGATAAAGTTAATTCCT+TGG - chr2.3:9197933-9197952 MS.gene028826:intron 35.0%
GGGAAATTCGAGTAGATAAT+GGG - chr2.3:9199789-9199808 MS.gene028826:CDS 35.0%
TAAGATGTGACGATAAGAAG+GGG - chr2.3:9198217-9198236 MS.gene028826:CDS 35.0%
TACAATCATGAGATGAGGTA+TGG - chr2.3:9199035-9199054 MS.gene028826:CDS 35.0%
TATTATCATCTCACATCCGA+TGG - chr2.3:9198827-9198846 MS.gene028826:CDS 35.0%
TTATCGTCACATCTTAAAGC+TGG + chr2.3:9198213-9198232 None:intergenic 35.0%
TTTGAGCAAATACAAGAGGA+AGG - chr2.3:9199457-9199476 MS.gene028826:CDS 35.0%
! ACATGATGACGAAATTGAAG+TGG - chr2.3:9199367-9199386 MS.gene028826:CDS 35.0%
! AGTGTAATGGTGTTAGAGAA+TGG - chr2.3:9198510-9198529 MS.gene028826:CDS 35.0%
! ATAGCATCTAGTTTATCAGG+TGG + chr2.3:9199308-9199327 None:intergenic 35.0%
! ATGTGTCTGTGGATTGTTAT+AGG - chr2.3:9198397-9198416 MS.gene028826:CDS 35.0%
! TCTAGCTTGAATAGCAAGTT+CGG + chr2.3:9199483-9199502 None:intergenic 35.0%
! TGTCAATTTTACCTTCTGCT+GGG + chr2.3:9199525-9199544 None:intergenic 35.0%
! TGTGTCTGTGGATTGTTATA+GGG - chr2.3:9198398-9198417 MS.gene028826:CDS 35.0%
! TTGGAGAATGGTGTTAAGAA+TGG - chr2.3:9198240-9198259 MS.gene028826:intron 35.0%
! TTGTCAATTTTACCTTCTGC+TGG + chr2.3:9199526-9199545 None:intergenic 35.0%
!! AAGTTGATGAAACACAAGCA+CGG - chr2.3:9198750-9198769 MS.gene028826:CDS 35.0%
!! CCCTTTAGGATTATATGTCA+TGG + chr2.3:9198943-9198962 None:intergenic 35.0%
AACCTAGAATTCACAACTGG+CGG + chr2.3:9198090-9198109 None:intergenic 40.0%
ACATGAACATCTTGCCCTTT+AGG + chr2.3:9198957-9198976 None:intergenic 40.0%
AGAACCACCAGTTATAGTTG+AGG - chr2.3:9199617-9199636 MS.gene028826:CDS 40.0%
AGAGATACAAAGATACTCGG+AGG - chr2.3:9197876-9197895 MS.gene028826:intron 40.0%
AGGGCAAGATGTTCATGTAA+TGG - chr2.3:9198959-9198978 MS.gene028826:CDS 40.0%
AGTATGAGGAACAACTTCCA+AGG + chr2.3:9197953-9197972 None:intergenic 40.0%
ATACCTGCTTGTCTTTCTCT+CGG + chr2.3:9199645-9199664 None:intergenic 40.0%
CAAATCACCAAAGGAGTTTG+CGG - chr2.3:9198890-9198909 MS.gene028826:CDS 40.0%
CAACTATAACTGGTGGTTCT+TGG + chr2.3:9199617-9199636 None:intergenic 40.0%
CAGCATTATTCGAGGAAAGA+TGG - chr2.3:9198994-9199013 MS.gene028826:CDS 40.0%
CTAGAAAGACTCATGCTTTC+CGG - chr2.3:9199099-9199118 MS.gene028826:CDS 40.0%
GAGAAATGGGACATGGATTT+GGG - chr2.3:9198685-9198704 MS.gene028826:CDS 40.0%
GAGATACAAAGATACTCGGA+GGG - chr2.3:9197877-9197896 MS.gene028826:intron 40.0%
GAGATTAAGAGGAAGCTTGA+GGG - chr2.3:9198294-9198313 MS.gene028826:intron 40.0%
GATTGAAGAGAAACAACGGA+TGG - chr2.3:9198350-9198369 MS.gene028826:CDS 40.0%
GCAAGATGTTCATGTAATGG+CGG - chr2.3:9198962-9198981 MS.gene028826:CDS 40.0%
GGGGAAATTCGAGTAGATAA+TGG - chr2.3:9199788-9199807 MS.gene028826:CDS 40.0%
GTTGTTCCTCATACTCATTC+TGG - chr2.3:9197958-9197977 MS.gene028826:intron 40.0%
TACACGCCAGTTAAGTGTAA+TGG - chr2.3:9198497-9198516 MS.gene028826:CDS 40.0%
TCAATCCTTCTCATGTCAAG+AGG + chr2.3:9199131-9199150 None:intergenic 40.0%
TCCAACCTAGAATTCACAAC+TGG + chr2.3:9198093-9198112 None:intergenic 40.0%
TTGGGTGTTTAATACTCCAG+TGG - chr2.3:9198773-9198792 MS.gene028826:CDS 40.0%
! ATGGTGTTAGAGAATGGTCA+CGG - chr2.3:9198516-9198535 MS.gene028826:CDS 40.0%
! GAATGGTGTTAAGAATGGAC+TGG - chr2.3:9198245-9198264 MS.gene028826:intron 40.0%
! TAATGTTTCTGCTCAGCAGT+TGG - chr2.3:9198029-9198048 MS.gene028826:CDS 40.0%
! TAGTCTTGATGTTGTTCAGC+TGG - chr2.3:9198164-9198183 MS.gene028826:intron 40.0%
! TCAGCAGTTGGATAGTGTTT+TGG - chr2.3:9198041-9198060 MS.gene028826:CDS 40.0%
! TTCTGATAGTGATAGCTCCT+CGG - chr2.3:9199971-9199990 MS.gene028826:CDS 40.0%
!! GGTTAGTGAAAGTGTTGAGA+AGG - chr2.3:9198539-9198558 MS.gene028826:CDS 40.0%
!! TATAGGGTTGATAATGGGAG+TGG - chr2.3:9198414-9198433 MS.gene028826:CDS 40.0%
!! TGAAGTGGACATTGATAGTG+TGG - chr2.3:9199382-9199401 MS.gene028826:CDS 40.0%
!! TTAAGAATGGACTGGCTTCA+CGG - chr2.3:9198253-9198272 MS.gene028826:intron 40.0%
AAGAGAAACAACGGATGGCT+GGG - chr2.3:9198355-9198374 MS.gene028826:CDS 45.0%
AAGAGATGCGGGAGATTAAG+AGG - chr2.3:9198283-9198302 MS.gene028826:intron 45.0%
AGATGTTCATGTAATGGCGG+AGG - chr2.3:9198965-9198984 MS.gene028826:CDS 45.0%
ATCCTTCTCATGTCAAGAGG+TGG + chr2.3:9199128-9199147 None:intergenic 45.0%
ATGTGACGATAAGAAGGGGT+TGG - chr2.3:9198221-9198240 MS.gene028826:CDS 45.0%
CGCAAGCAAGAATTCCGAAT+TGG + chr2.3:9198598-9198617 None:intergenic 45.0%
GAAGGAGAAGAGAACACCTA+AGG - chr2.3:9198557-9198576 MS.gene028826:CDS 45.0%
GACTTCTTGTTACTCTCAGC+AGG + chr2.3:9198636-9198655 None:intergenic 45.0%
GAGAGAAAGACAAGCAGGTA+TGG - chr2.3:9199644-9199663 MS.gene028826:CDS 45.0%
GATAAGAAGGGGTTGGAGAA+TGG - chr2.3:9198228-9198247 MS.gene028826:CDS 45.0%
GATGAAACACAAGCACGGTT+GGG - chr2.3:9198755-9198774 MS.gene028826:CDS 45.0%
GATGTTGTTCAGCTGGAAGA+TGG - chr2.3:9198171-9198190 MS.gene028826:intron 45.0%
GCATGAGTCTTTCTAGACAG+AGG + chr2.3:9199095-9199114 None:intergenic 45.0%
GCCAGTTGTGAATTCTAGGT+TGG - chr2.3:9198089-9198108 MS.gene028826:intron 45.0%
GGAGAAATGGGACATGGATT+TGG - chr2.3:9198684-9198703 MS.gene028826:CDS 45.0%
GGAGATTAAGAGGAAGCTTG+AGG - chr2.3:9198293-9198312 MS.gene028826:intron 45.0%
GGAGCTATCAGCATTATTCG+AGG - chr2.3:9198986-9199005 MS.gene028826:CDS 45.0%
GGGGACTGTAGTTGAAGATA+AGG - chr2.3:9197846-9197865 MS.gene028826:CDS 45.0%
GTAGCACCAGAATGAGTATG+AGG + chr2.3:9197967-9197986 None:intergenic 45.0%
GTCGAGTTTGTATCGTAAGC+AGG - chr2.3:9198131-9198150 MS.gene028826:intron 45.0%
GTCTTTCTAGACAGAGGTGA+AGG + chr2.3:9199089-9199108 None:intergenic 45.0%
TACCTGCTTGTCTTTCTCTC+GGG + chr2.3:9199644-9199663 None:intergenic 45.0%
TGATGAAACACAAGCACGGT+TGG - chr2.3:9198754-9198773 MS.gene028826:CDS 45.0%
TGGTGGTTTGAATGTGTCTG+TGG - chr2.3:9198386-9198405 MS.gene028826:CDS 45.0%
TGTGGATGCAGAGACTCTTT+GGG - chr2.3:9199400-9199419 MS.gene028826:CDS 45.0%
TTATCCGGATCGTTTGCCTT+CGG + chr2.3:9199230-9199249 None:intergenic 45.0%
TTCACAGTACCCAAGTCCAT+CGG + chr2.3:9198846-9198865 None:intergenic 45.0%
TTCTTGTTACTCTCAGCAGG+CGG + chr2.3:9198633-9198652 None:intergenic 45.0%
TTGATGGGACGAAGGATAAC+GGG - chr2.3:9198004-9198023 MS.gene028826:CDS 45.0%
! AAGCATGGCGTTGGAGAAAT+GGG - chr2.3:9198672-9198691 MS.gene028826:CDS 45.0%
! ATCTCACATCCGATGGACTT+GGG - chr2.3:9198834-9198853 MS.gene028826:CDS 45.0%
! ATGAGGTATGGCGTGGATTA+TGG - chr2.3:9199047-9199066 MS.gene028826:CDS 45.0%
! GTTGATGGGACGAAGGATAA+CGG - chr2.3:9198003-9198022 MS.gene028826:CDS 45.0%
! TGAGGTATGGCGTGGATTAT+GGG - chr2.3:9199048-9199067 MS.gene028826:CDS 45.0%
! TGGTGTTAGAGAATGGTCAC+GGG - chr2.3:9198517-9198536 MS.gene028826:CDS 45.0%
! TGTGAATTCTAGGTTGGACG+TGG - chr2.3:9198095-9198114 MS.gene028826:intron 45.0%
!! GAATAGAACTGGTTCGCCTT+AGG + chr2.3:9198576-9198595 None:intergenic 45.0%
!! GATTCTGGCTCTTCATCAAG+TGG - chr2.3:9199845-9199864 MS.gene028826:CDS 45.0%
!!! GTTGGATAGTGTTTTGGCTC+CGG - chr2.3:9198047-9198066 MS.gene028826:CDS 45.0%
!!! TCGTTTGCCTTCGGCTTTTT+TGG + chr2.3:9199221-9199240 None:intergenic 45.0%
AAAGCCGAAGGCAAACGATC+CGG - chr2.3:9199223-9199242 MS.gene028826:CDS 50.0%
AATTTCCCCTTGCACAGGCA+AGG + chr2.3:9199777-9199796 None:intergenic 50.0%
ACATCCTCCGCAAACTCCTT+TGG + chr2.3:9198900-9198919 None:intergenic 50.0%
ACCTGCTTGTCTTTCTCTCG+GGG + chr2.3:9199643-9199662 None:intergenic 50.0%
ACGGTCAAAGCAAGAGATGC+GGG - chr2.3:9198272-9198291 MS.gene028826:intron 50.0%
ACTCGAATTTCCCCTTGCAC+AGG + chr2.3:9199782-9199801 None:intergenic 50.0%
AGCAGCTCAAGCAGTGATTC+TGG - chr2.3:9199830-9199849 MS.gene028826:CDS 50.0%
AGCTGAACGAGTCAAGCTCA+TGG + chr2.3:9199186-9199205 None:intergenic 50.0%
AGGTAGCTTCTGCAGGTGTT+CGG - chr2.3:9198457-9198476 MS.gene028826:CDS 50.0%
AGTCGAGGCTGAGCAAGAAT+TGG - chr2.3:9198865-9198884 MS.gene028826:CDS 50.0%
ATCACCAAAGGAGTTTGCGG+AGG - chr2.3:9198893-9198912 MS.gene028826:CDS 50.0%
CACCACCTCTTGACATGAGA+AGG - chr2.3:9199123-9199142 MS.gene028826:CDS 50.0%
CACGGTCAAAGCAAGAGATG+CGG - chr2.3:9198271-9198290 MS.gene028826:intron 50.0%
CCAAAGACCTCACCGTTTCA+AGG + chr2.3:9198323-9198342 None:intergenic 50.0%
CCAAGACGTTCAACATCCAC+TGG + chr2.3:9198792-9198811 None:intergenic 50.0%
CCAGTGGATGTTGAACGTCT+TGG - chr2.3:9198789-9198808 MS.gene028826:CDS 50.0%
CCTTGAAACGGTGAGGTCTT+TGG - chr2.3:9198320-9198339 MS.gene028826:intron 50.0%
CGAGTCAAGCTCATGGGATT+TGG + chr2.3:9199179-9199198 None:intergenic 50.0%
CTCCGCCAGTTGTGAATTCT+AGG - chr2.3:9198085-9198104 MS.gene028826:CDS 50.0%
CTTCTCATGTCAAGAGGTGG+TGG + chr2.3:9199125-9199144 None:intergenic 50.0%
GAAGAGAAACAACGGATGGC+TGG - chr2.3:9198354-9198373 MS.gene028826:CDS 50.0%
GCTGAACGAGTCAAGCTCAT+GGG + chr2.3:9199185-9199204 None:intergenic 50.0%
GGTGTTAGAGAATGGTCACG+GGG - chr2.3:9198518-9198537 MS.gene028826:CDS 50.0%
GTCAAGCTCATGGGATTTGG+AGG + chr2.3:9199176-9199195 None:intergenic 50.0%
GTGTGGATGCAGAGACTCTT+TGG - chr2.3:9199399-9199418 MS.gene028826:CDS 50.0%
GTGTTCGGAGAGAGGCTAAT+AGG - chr2.3:9198472-9198491 MS.gene028826:CDS 50.0%
TCATGAGATGAGGTATGGCG+TGG - chr2.3:9199040-9199059 MS.gene028826:CDS 50.0%
TCCTGCTCCAAAAAAGCCGA+AGG - chr2.3:9199211-9199230 MS.gene028826:CDS 50.0%
! ACTTGGGTACTGTGAAGTCG+AGG - chr2.3:9198850-9198869 MS.gene028826:CDS 50.0%
! AGGTGAAGGTGCAGAAATCG+CGG + chr2.3:9199075-9199094 None:intergenic 50.0%
! AGTCACTGTTGATGGGACGA+AGG - chr2.3:9197996-9198015 MS.gene028826:CDS 50.0%
! CATCTCACATCCGATGGACT+TGG - chr2.3:9198833-9198852 MS.gene028826:CDS 50.0%
! CATGGAAAGAAGCATGGCGT+TGG - chr2.3:9198663-9198682 MS.gene028826:CDS 50.0%
! CGGTGAGGTCTTTGGTGATT+AGG - chr2.3:9198328-9198347 MS.gene028826:CDS 50.0%
! GAAGCATGGCGTTGGAGAAA+TGG - chr2.3:9198671-9198690 MS.gene028826:CDS 50.0%
!! TCTTGGCTCTACAGGAAGCA+TGG + chr2.3:9199600-9199619 None:intergenic 50.0%
ACCGCCACAGTCACTGTTGA+TGG - chr2.3:9197988-9198007 MS.gene028826:intron 55.0%
AGAAACAACGGATGGCTGGG+AGG - chr2.3:9198358-9198377 MS.gene028826:CDS 55.0%
ATCAACAGTGACTGTGGCGG+TGG + chr2.3:9197989-9198008 None:intergenic 55.0%
ATGTGACCCTGCATCAGACC+CGG + chr2.3:9200000-9200019 None:intergenic 55.0%
CCCATCAACAGTGACTGTGG+CGG + chr2.3:9197992-9198011 None:intergenic 55.0%
CCGCCACAGTCACTGTTGAT+GGG - chr2.3:9197989-9198008 MS.gene028826:intron 55.0%
CGTCCCATCAACAGTGACTG+TGG + chr2.3:9197995-9198014 None:intergenic 55.0%
CTCGGGGCCTCAACTATAAC+TGG + chr2.3:9199627-9199646 None:intergenic 55.0%
GCTTGAGGGCGACCTTGAAA+CGG - chr2.3:9198308-9198327 MS.gene028826:intron 55.0%
GGGGCCTCAACTATAACTGG+TGG + chr2.3:9199624-9199643 None:intergenic 55.0%
TGAGCGAATTGCCCAGCAGA+AGG - chr2.3:9199511-9199530 MS.gene028826:CDS 55.0%
TTCTGCAGGTGTTCGGAGAG+AGG - chr2.3:9198464-9198483 MS.gene028826:CDS 55.0%
! GGCGTTGGAGAAATGGGACA+TGG - chr2.3:9198678-9198697 MS.gene028826:CDS 55.0%
! GGTGAAGGTGCAGAAATCGC+GGG + chr2.3:9199074-9199093 None:intergenic 55.0%
! TCATGTCAAGAGGTGGTGGC+CGG + chr2.3:9199121-9199140 None:intergenic 55.0%
!! CACTCTGAGGTAGCTTCTGC+AGG - chr2.3:9198450-9198469 MS.gene028826:CDS 55.0%
!! CTGGTGGTTCTTGGCTCTAC+AGG + chr2.3:9199608-9199627 None:intergenic 55.0%
!!! AGTGTTTTGGCTCCGGAGGA+TGG - chr2.3:9198054-9198073 MS.gene028826:CDS 55.0%
!!! GCCTTCGGCTTTTTTGGAGC+AGG + chr2.3:9199215-9199234 None:intergenic 55.0%
!!! GGATAGTGTTTTGGCTCCGG+AGG - chr2.3:9198050-9198069 MS.gene028826:CDS 55.0%
!!! GTGTTTTGGCTCCGGAGGAT+GGG - chr2.3:9198055-9198074 MS.gene028826:CDS 55.0%
AGCTAAGCGCGCTCACTCTG+AGG - chr2.3:9198437-9198456 MS.gene028826:CDS 60.0%
AGGGCGACCTTGAAACGGTG+AGG - chr2.3:9198313-9198332 MS.gene028826:intron 60.0%
AGTGATAGCTCCTCGGCGTC+CGG - chr2.3:9199978-9199997 MS.gene028826:CDS 60.0%
CAACGGATGGCTGGGAGGTA+TGG - chr2.3:9198363-9198382 MS.gene028826:CDS 60.0%
CAAGCAGGTATGGCCGCTTG+TGG - chr2.3:9199654-9199673 MS.gene028826:CDS 60.0%
CCCATCCTTGCCTGTGCAAG+GGG - chr2.3:9199769-9199788 MS.gene028826:CDS 60.0%
CCCCATCCTTGCCTGTGCAA+GGG - chr2.3:9199768-9199787 MS.gene028826:CDS 60.0%
CCCCTTGCACAGGCAAGGAT+GGG + chr2.3:9199772-9199791 None:intergenic 60.0%
CCCTTGCACAGGCAAGGATG+GGG + chr2.3:9199771-9199790 None:intergenic 60.0%
CCTTGCACAGGCAAGGATGG+GGG + chr2.3:9199770-9199789 None:intergenic 60.0%
GCCCCGAGAGAAAGACAAGC+AGG - chr2.3:9199639-9199658 MS.gene028826:CDS 60.0%
GGAGCCGAATTCCCATCCTC+CGG + chr2.3:9198069-9198088 None:intergenic 60.0%
GGCTCCGGAGGATGGGAATT+CGG - chr2.3:9198062-9198081 MS.gene028826:CDS 60.0%
TCCCCTTGCACAGGCAAGGA+TGG + chr2.3:9199773-9199792 None:intergenic 60.0%
! ATGGCTGGGAGGTATGGTGG+TGG - chr2.3:9198369-9198388 MS.gene028826:CDS 60.0%
CCCCCATCCTTGCCTGTGCA+AGG - chr2.3:9199767-9199786 MS.gene028826:CDS 65.0%
GTGATAGCTCCTCGGCGTCC+GGG - chr2.3:9199979-9199998 MS.gene028826:CDS 65.0%
! CGGATGGCTGGGAGGTATGG+TGG - chr2.3:9198366-9198385 MS.gene028826:CDS 65.0%
CGGCGTCCGGGTCTGATGCA+GGG - chr2.3:9199991-9200010 MS.gene028826:CDS 70.0%
TCGGCGTCCGGGTCTGATGC+AGG - chr2.3:9199990-9200009 MS.gene028826:CDS 70.0%
TGCATCAGACCCGGACGCCG+AGG + chr2.3:9199991-9200010 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 9197838 9200022 9197838 ID=MS.gene028826
chr2.3 mRNA 9197838 9200022 9197838 ID=MS.gene028826.t1;Parent=MS.gene028826
chr2.3 exon 9198328 9200022 9198328 ID=MS.gene028826.t1.exon1;Parent=MS.gene028826.t1
chr2.3 CDS 9198328 9200022 9198328 ID=cds.MS.gene028826.t1;Parent=MS.gene028826.t1
chr2.3 exon 9198200 9198248 9198200 ID=MS.gene028826.t1.exon2;Parent=MS.gene028826.t1
chr2.3 CDS 9198200 9198248 9198200 ID=cds.MS.gene028826.t1;Parent=MS.gene028826.t1
chr2.3 exon 9197994 9198107 9197994 ID=MS.gene028826.t1.exon3;Parent=MS.gene028826.t1
chr2.3 CDS 9197994 9198107 9197994 ID=cds.MS.gene028826.t1;Parent=MS.gene028826.t1
chr2.3 exon 9197838 9197890 9197838 ID=MS.gene028826.t1.exon4;Parent=MS.gene028826.t1
chr2.3 CDS 9197838 9197890 9197838 ID=cds.MS.gene028826.t1;Parent=MS.gene028826.t1
Gene Sequence

>MS.gene028826

ATGGATTCGGGGACTGTAGTTGAAGATAAGGTAGTTAAAGAGATACAAAGATACTCGGAGGGAAAAGTATACACGAGAAAAAATTTCAAAGTTTCGGAGGATAAAGTTAATTCCTTGGAAGTTGTTCCTCATACTCATTCTGGTGCTACCACCGCCACAGTCACTGTTGATGGGACGAAGGATAACGGGAATAATGTTTCTGCTCAGCAGTTGGATAGTGTTTTGGCTCCGGAGGATGGGAATTCGGCTCCGCCAGTTGTGAATTCTAGGTTGGACGTGGTTTCTGAAGATTCGTCGAGTTTGTATCGTAAGCAGGATGAGCATTTTAGTCTTGATGTTGTTCAGCTGGAAGATGGTAATGATTCGTTAGAACCAGCTTTAAGATGTGACGATAAGAAGGGGTTGGAGAATGGTGTTAAGAATGGACTGGCTTCACGGTCAAAGCAAGAGATGCGGGAGATTAAGAGGAAGCTTGAGGGCGACCTTGAAACGGTGAGGTCTTTGGTGATTAGGATTGAAGAGAAACAACGGATGGCTGGGAGGTATGGTGGTGGTTTGAATGTGTCTGTGGATTGTTATAGGGTTGATAATGGGAGTGGAGCTAAGCGCGCTCACTCTGAGGTAGCTTCTGCAGGTGTTCGGAGAGAGGCTAATAGGTTTACACGCCAGTTAAGTGTAATGGTGTTAGAGAATGGTCACGGGGTTAGTGAAAGTGTTGAGAAGGAGAAGAGAACACCTAAGGCGAACCAGTTCTATTCCAATTCGGAATTCTTGCTTGCGAAAGATAAGTTTCCGCCTGCTGAGAGTAACAAGAAGTCAAAATCACATGGAAAGAAGCATGGCGTTGGAGAAATGGGACATGGATTTGGGATAGTATCGAAGTATTTTAAGAACTGTAGCTCATTGCTTGAAAAGTTGATGAAACACAAGCACGGTTGGGTGTTTAATACTCCAGTGGATGTTGAACGTCTTGGTTTGCATGATTATTTTATTATCATCTCACATCCGATGGACTTGGGTACTGTGAAGTCGAGGCTGAGCAAGAATTGGTACAAATCACCAAAGGAGTTTGCGGAGGATGTGAGACTTACTTTTCGTAATGCCATGACATATAATCCTAAAGGGCAAGATGTTCATGTAATGGCGGAGGAGCTATCAGCATTATTCGAGGAAAGATGGGCCATTATAGAGTCACATTACAATCATGAGATGAGGTATGGCGTGGATTATGGGCCCGCGATTTCTGCACCTTCACCTCTGTCTAGAAAGACTCATGCTTTCCGGCCACCACCTCTTGACATGAGAAGGATTGATAGATCAGATTCAATTACAAAACCTCCAAATCCCATGAGCTTGACTCGTTCAGCTCGAACTCCTGCTCCAAAAAAGCCGAAGGCAAACGATCCGGATAAAAGAGACATGACATACTATGAAAAGCAAAAACTTAGCACACATCTTCAGAATCTACCACCTGATAAACTAGATGCTATTGTACAGATCATTAAGAAACAAAATTCGGCACTTTCCCAACATGATGACGAAATTGAAGTGGACATTGATAGTGTGGATGCAGAGACTCTTTGGGAGCTTGATAGATATGTTACCAACTATAAGAAAAGTTTGAGCAAATACAAGAGGAAGGCCGAACTTGCTATTCAAGCTAGAGCAGAAGCTGAGCGAATTGCCCAGCAGAAGGTAAAATTGACAATTTCAAAGTTTAATCTTCTTTTGCAAATACTTGTTACTAATTGAATTTATTCCATGCTTCCTGTAGAGCCAAGAACCACCAGTTATAGTTGAGGCCCCGAGAGAAAGACAAGCAGGTATGGCCGCTTGTGGACTATTATTGTTGATCTCTTTTCATCGTTCATCAATTAAATTAATTGAAATATTTTGTCTGCTTGTTTCTGAGCAGATGAAAGAAATGATCCCCCATCCTTGCCTGTGCAAGGGGAAATTCGAGTAGATAATGGGAGTAAGACAAGTAGTTCAAGCAGCTCAAGCAGTGATTCTGGCTCTTCATCAAGTGGTATATTAAATAATTATTTAATATATATCTGTCCCATAATTTATGGTTATACAAGGTCAACCTCGCTTATACTTTAATGTCTGATATTAATGTGCTTTGGCAGATTCTGATAGTGATAGCTCCTCGGCGTCCGGGTCTGATGCAGGGTCACATTGA
Protein sequence

>MS.gene028826.t1

MDSGTVVEDKVVKEIQRYSEGKVYTRKNFKVSEDKVNSLEVVPHTHSGATTATVTVDGTKDNGNNVSAQQLDSVLAPEDGNSAPPVVNSRLDVVSEDSSSLYRKQDEHFSLDVVQLEDGNDSLEPALRCDDKKGLENGVKNGLASRSKQEMREIKRKLEGDLETVRSLVIRIEEKQRMAGRYGGGLNVSVDCYRVDNGSGAKRAHSEVASAGVRREANRFTRQLSVMVLENGHGVSESVEKEKRTPKANQFYSNSEFLLAKDKFPPAESNKKSKSHGKKHGVGEMGHGFGIVSKYFKNCSSLLEKLMKHKHGWVFNTPVDVERLGLHDYFIIISHPMDLGTVKSRLSKNWYKSPKEFAEDVRLTFRNAMTYNPKGQDVHVMAEELSALFEERWAIIESHYNHEMRYGVDYGPAISAPSPLSRKTHAFRPPPLDMRRIDRSDSITKPPNPMSLTRSARTPAPKKPKANDPDKRDMTYYEKQKLSTHLQNLPPDKLDAIVQIIKKQNSALSQHDDEIEVDIDSVDAETLWELDRYVTNYKKSLSKYKRKAELAIQARAEAERIAQQKSQEPPVIVEAPRERQADERNDPPSLPVQGEIRVDNGSKTSSSSSSSSDSGSSSSDSDSDSSSASGSDAGSH