AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene028827

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028827.t1 MTR_2g091130 96.395 638 23 0 1 638 1 638 0.0 1252
MS.gene028827.t1 MTR_2g091135 92.233 618 34 3 1 606 1 616 0.0 1132
MS.gene028827.t1 MTR_2g091135 92.437 595 32 2 1 583 1 594 0.0 1100
MS.gene028827.t1 MTR_4g079650 61.915 449 134 8 136 582 497 910 1.12e-170 512
MS.gene028827.t1 MTR_4g079650 61.915 449 134 8 136 582 497 910 2.72e-170 511
MS.gene028827.t1 MTR_4g079650 65.416 373 121 5 136 506 497 863 1.74e-156 472
MS.gene028827.t1 MTR_4g092900 45.687 313 127 8 265 549 128 425 2.27e-70 237
MS.gene028827.t1 MTR_4g092900 44.512 328 139 8 250 549 113 425 2.38e-70 238
MS.gene028827.t1 MTR_4g092880 40.979 327 116 10 254 549 121 401 9.93e-59 206
MS.gene028827.t1 MTR_3g075040 39.313 262 118 6 297 549 207 436 5.80e-46 172
MS.gene028827.t1 MTR_3g075040 39.313 262 118 6 297 549 207 436 1.89e-45 173
MS.gene028827.t1 MTR_4g092880 40.977 266 104 9 254 488 121 364 2.51e-44 163
MS.gene028827.t1 MTR_0018s0090 58.095 105 44 0 294 398 195 299 1.09e-36 145
MS.gene028827.t1 MTR_0018s0090 58.095 105 44 0 294 398 195 299 2.06e-36 145
MS.gene028827.t1 MTR_2g018270 56.190 105 46 0 300 404 83 187 1.20e-34 138
MS.gene028827.t1 MTR_8g070660 29.268 246 155 4 293 535 90 319 1.55e-28 117
MS.gene028827.t1 MTR_6g033375 31.535 241 136 5 303 535 75 294 3.55e-28 116
MS.gene028827.t1 MTR_8g070660 44.444 108 57 1 293 397 90 197 1.37e-25 107
MS.gene028827.t1 MTR_5g069490 33.190 232 122 6 309 537 111 312 9.48e-22 97.4
MS.gene028827.t1 MTR_2g437920 30.131 229 132 6 311 535 146 350 1.26e-17 85.9
MS.gene028827.t1 MTR_6g045290 28.837 215 122 5 333 537 79 272 8.46e-15 77.8
MS.gene028827.t1 MTR_2g005820 38.298 94 57 1 303 395 202 295 4.05e-12 69.7
MS.gene028827.t1 MTR_0662s0020 32.743 113 67 4 300 406 138 247 9.50e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028827.t1 AT1G06230 60.086 466 165 8 144 596 272 729 2.08e-164 489
MS.gene028827.t1 AT1G06230 60.086 466 165 8 144 596 272 729 2.08e-164 489
MS.gene028827.t1 AT1G06230 60.086 466 165 8 144 596 272 729 2.08e-164 489
MS.gene028827.t1 AT1G06230 60.086 466 165 8 144 596 272 729 2.08e-164 489
MS.gene028827.t1 AT1G73150 50.000 316 130 6 263 559 86 392 4.23e-84 271
MS.gene028827.t1 AT1G73150 50.000 316 130 6 263 559 86 392 1.03e-83 271
MS.gene028827.t1 AT1G17790 45.079 315 136 7 287 574 122 426 1.63e-72 242
MS.gene028827.t1 AT3G27260 40.486 247 115 6 297 537 177 397 3.19e-43 166
MS.gene028827.t1 AT3G27260 40.486 247 115 6 297 537 177 397 7.16e-43 166
MS.gene028827.t1 AT3G27260 40.486 247 115 6 297 537 177 397 8.29e-43 165
MS.gene028827.t1 AT3G27260 40.486 247 115 6 297 537 128 348 9.33e-43 165
MS.gene028827.t1 AT5G14270 37.452 259 134 5 293 550 134 365 1.66e-42 163
MS.gene028827.t1 AT5G14270 37.452 259 134 5 293 550 134 365 1.66e-42 163
MS.gene028827.t1 AT5G14270 37.452 259 134 5 293 550 134 365 1.68e-42 163
MS.gene028827.t1 AT3G01770 38.983 236 114 5 297 531 130 336 3.94e-40 154
MS.gene028827.t1 AT3G01770 39.331 239 109 5 297 531 130 336 1.13e-39 154
MS.gene028827.t1 AT5G63320 35.409 257 135 6 293 544 158 388 8.06e-36 141
MS.gene028827.t1 AT5G63320 35.409 257 135 6 293 544 158 388 8.06e-36 141
MS.gene028827.t1 AT5G63320 35.409 257 135 6 293 544 158 388 1.27e-35 144
MS.gene028827.t1 AT5G65630 33.083 266 119 4 128 391 56 264 7.51e-34 137
MS.gene028827.t1 AT5G65630 55.660 106 46 1 444 549 374 478 4.89e-28 119
MS.gene028827.t1 AT5G10550 59.000 100 41 0 292 391 170 269 4.06e-32 132
MS.gene028827.t1 AT5G10550 56.250 96 42 0 454 549 378 473 6.91e-26 112
MS.gene028827.t1 AT2G34900 30.120 249 156 3 297 544 1 232 1.34e-31 124
MS.gene028827.t1 AT2G34900 30.120 249 156 3 297 544 111 342 3.34e-31 126
MS.gene028827.t1 AT5G46550 47.107 121 57 2 300 414 73 192 1.73e-28 120
MS.gene028827.t1 AT3G52280 28.163 245 155 5 297 537 95 322 8.96e-25 107
MS.gene028827.t1 AT3G52280 28.099 242 155 4 297 535 112 337 1.05e-24 107

Find 181 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATCGTCTGGGTCTGATTC+AGG 0.166031 2.3:-9207421 MS.gene028827:CDS
ACATGAACATCTTGCCCTTT+AGG 0.234304 2.3:+9208476 None:intergenic
CTCCGCCGGTTGTGAATTCT+AGG 0.254094 2.3:-9209348 MS.gene028827:CDS
GGAGAAATGGGACATGGATT+TGG 0.255723 2.3:-9208746 MS.gene028827:CDS
ATGAGGTATGGCTTGAATTA+TGG 0.271934 2.3:-9208383 MS.gene028827:CDS
CTAACACCATTACACTTAAC+TGG 0.281372 2.3:+9208927 None:intergenic
TGGTGAGGTTGTTGGTGATT+AGG 0.284725 2.3:-9209102 MS.gene028827:CDS
CGAGTCAAGCTCAAGGGATT+TGG 0.299517 2.3:+9208254 None:intergenic
GTTGTTCCTCATACTCATTC+TGG 0.307616 2.3:-9209475 MS.gene028827:CDS
GATCGTTATAGGGTTGATAA+TGG 0.315135 2.3:-9209022 MS.gene028827:CDS
GAGAAATGGGACATGGATTT+GGG 0.327055 2.3:-9208745 MS.gene028827:CDS
GAAATTCGAGTCGATAATAA+TGG 0.328180 2.3:-9207633 MS.gene028827:CDS
GTGTGGATGCAGAGACTCTT+TGG 0.328188 2.3:-9208031 MS.gene028827:CDS
AGCAGCTCAAGCAGTGATTC+TGG 0.334206 2.3:-9207591 MS.gene028827:CDS
CAACTATAACTGGTGGTTCT+TGG 0.335527 2.3:+9207810 None:intergenic
TCAACAGTTGGATAGTGTTT+TGG 0.336808 2.3:-9209392 MS.gene028827:CDS
CGCAAGCAAGAATTCCGAAT+TGG 0.349984 2.3:+9208835 None:intergenic
TTCAATTTCATCATCATGTT+GGG 0.352389 2.3:+9208067 None:intergenic
TGAGGTATGGCTTGAATTAT+GGG 0.358009 2.3:-9208382 MS.gene028827:CDS
ATGTGTCTGTGGATCGTTAT+AGG 0.361266 2.3:-9209033 MS.gene028827:CDS
GTGTTCCGAGAGAGGCTAAT+AGG 0.362707 2.3:-9208958 MS.gene028827:CDS
AGTGATAGCTCCTCATCGTC+TGG 0.364047 2.3:-9207433 MS.gene028827:CDS
CTCGGGGCATCAACTATAAC+TGG 0.373580 2.3:+9207800 None:intergenic
CATCTCACATCCGATGGACT+TGG 0.390431 2.3:-9208597 MS.gene028827:CDS
GACTTCTTGTTACTCTCTGC+AGG 0.391383 2.3:+9208797 None:intergenic
GAAGCATGGCGTTGGAGAAA+TGG 0.393841 2.3:-9208759 MS.gene028827:CDS
GGTTCCGGAGGATGGGAATT+CGG 0.396211 2.3:-9209371 MS.gene028827:CDS
ATTGTAATTTGACTCTATAA+TGG 0.399524 2.3:+9208412 None:intergenic
GCCTCTTGACATGAGGAATC+TGG 0.411079 2.3:-9208303 MS.gene028827:CDS
TACCTGCTTGTCTTTCTCTC+GGG 0.411814 2.3:+9207783 None:intergenic
CAACGGATGGCTGGGAGGTA+TGG 0.413417 2.3:-9209067 MS.gene028827:CDS
TTATCAGGATCGTTTGCCTT+CGG 0.416620 2.3:+9208203 None:intergenic
AGAGGATAAAGTTAATTCCT+TGG 0.418016 2.3:-9209500 MS.gene028827:CDS
ACATCCTCCGCAAACTCCTT+TGG 0.418265 2.3:+9208533 None:intergenic
ACCGCCACCGTCACTGTTGA+TGG 0.421112 2.3:-9209445 MS.gene028827:CDS
GAAGAGAAACAACGGATGGC+TGG 0.423094 2.3:-9209076 MS.gene028827:CDS
ATACCTGCTTGTCTTTCTCT+CGG 0.424151 2.3:+9207782 None:intergenic
GAATAGAACTGGTTCGCCTT+AGG 0.428319 2.3:+9208857 None:intergenic
CTTCAATTTCATCATCATGT+TGG 0.431836 2.3:+9208066 None:intergenic
CCCCATCCTTGCCTGTGCAA+GGG 0.434310 2.3:-9207656 MS.gene028827:CDS
ATTCCGAATTGGAATAGAAC+TGG 0.439085 2.3:+9208846 None:intergenic
CAGCATTATTCGAGGAAAGA+TGG 0.443395 2.3:-9208436 MS.gene028827:CDS
CTAGAAAGACTCCTGCTTTG+CGG 0.445924 2.3:-9208331 MS.gene028827:CDS
GAGGAGATGTGATGATAAGA+AGG 0.445935 2.3:-9209215 MS.gene028827:CDS
CCATGACATATAATCCTAAA+GGG 0.451805 2.3:-9208490 MS.gene028827:CDS
GGATAACGGGAATAATGTTT+CGG 0.452791 2.3:-9209416 MS.gene028827:CDS
GATCATTAAGAAACGAAATT+CGG 0.453860 2.3:-9208096 MS.gene028827:CDS
CATCGTCTGGGTCTGATTCA+GGG 0.454571 2.3:-9207420 MS.gene028827:CDS
ATCGTTATAGGGTTGATAAT+GGG 0.456646 2.3:-9209021 MS.gene028827:CDS
AAGCATGGCGTTGGAGAAAT+GGG 0.460416 2.3:-9208758 MS.gene028827:CDS
GCCATGACATATAATCCTAA+AGG 0.461758 2.3:-9208491 MS.gene028827:CDS
AGAGGCGGTGGCCGCAAAGC+AGG 0.462424 2.3:+9208320 None:intergenic
TCCCCTTGCACAGGCAAGGA+TGG 0.467964 2.3:+9207654 None:intergenic
CCTTGAAATGGTGAGGTTGT+TGG 0.468441 2.3:-9209110 MS.gene028827:CDS
TAGTCTTGATGTTGTTCAGC+TGG 0.468758 2.3:-9209269 MS.gene028827:CDS
ATTTGTTAGAACCAGCTTTG+AGG 0.470294 2.3:-9209234 MS.gene028827:CDS
TACACGCCAGTTAAGTGTAA+TGG 0.471994 2.3:-9208933 MS.gene028827:CDS
TTGATGGGACGAAGGATAAC+GGG 0.473241 2.3:-9209429 MS.gene028827:CDS
CCCCTTGCACAGGCAAGGAT+GGG 0.474347 2.3:+9207655 None:intergenic
CCCTTTAGGATTATATGTCA+TGG 0.480279 2.3:+9208490 None:intergenic
AGGAGATGTGATGATAAGAA+GGG 0.481966 2.3:-9209214 MS.gene028827:CDS
ACGGTCAAAGCAAGAGATGC+GGG 0.483248 2.3:-9209158 MS.gene028827:CDS
GCTTGAGGGCGACCTTGAAA+TGG 0.483395 2.3:-9209122 MS.gene028827:CDS
GAACCAGTTCTATTCCAATT+CGG 0.484886 2.3:-9208849 MS.gene028827:CDS
TAATGTTTCGGTTCAACAGT+TGG 0.486868 2.3:-9209404 MS.gene028827:CDS
TGTGGATGCAGAGACTCTTT+GGG 0.487754 2.3:-9208030 MS.gene028827:CDS
CCAGTGGATGTTGAACGTCT+TGG 0.491052 2.3:-9208641 MS.gene028827:CDS
TCTAGCTTGAATAGCAAGTT+CGG 0.494718 2.3:+9207950 None:intergenic
AGTCGAGGCTGAGCAAGAAT+TGG 0.497693 2.3:-9208565 MS.gene028827:CDS
TGTGTCTGTGGATCGTTATA+GGG 0.499515 2.3:-9209032 MS.gene028827:CDS
TTGGAGAATGGTGTTAAGAA+TGG 0.503549 2.3:-9209190 MS.gene028827:CDS
TTAAGAATGGACTGGCTTCA+CGG 0.503952 2.3:-9209177 MS.gene028827:CDS
GGATGGGAATTCGGCTCCGC+CGG 0.504256 2.3:-9209362 MS.gene028827:CDS
GGGATTAAGAGGAAGCTTGA+GGG 0.506455 2.3:-9209136 MS.gene028827:CDS
AAATTCGAGTCGATAATAAT+GGG 0.507929 2.3:-9207632 MS.gene028827:CDS
CCCTTGCACAGGCAAGGATG+GGG 0.511507 2.3:+9207656 None:intergenic
CAATCTGAGGTAGCTTCTGC+AGG 0.511816 2.3:-9208980 MS.gene028827:CDS
GTCGAGTTTGTATCGTAGGC+AGG 0.512593 2.3:-9209302 MS.gene028827:CDS
GATTAGTGAAAGTGTTGAGA+AGG 0.513245 2.3:-9208891 MS.gene028827:CDS
GTCAAGCTCAAGGGATTTGG+AGG 0.514668 2.3:+9208257 None:intergenic
GCCGGTTGTGAATTCTAGGT+TGG 0.517229 2.3:-9209344 MS.gene028827:CDS
CCCATCCTTGCCTGTGCAAG+GGG 0.517558 2.3:-9207655 MS.gene028827:CDS
CATGGAAAGAAGCATGGCGT+TGG 0.520162 2.3:-9208767 MS.gene028827:CDS
ATCAACAGTGACGGTGGCGG+TGG 0.521030 2.3:+9209447 None:intergenic
GTTGATGGGACGAAGGATAA+CGG 0.523599 2.3:-9209430 MS.gene028827:CDS
AGCATTATTCGAGGAAAGAT+GGG 0.527838 2.3:-9208435 MS.gene028827:CDS
AGTGTAATGGTGTTAGAGAA+TGG 0.529484 2.3:-9208920 MS.gene028827:CDS
TGATGAAACACAAGCACGGT+TGG 0.531315 2.3:-9208676 MS.gene028827:CDS
TCCAACCTAGAATTCACAAC+CGG 0.532620 2.3:+9209343 None:intergenic
TACAATCATGAGATGAGGTA+TGG 0.535160 2.3:-9208395 MS.gene028827:CDS
CCAACAACCTCACCATTTCA+AGG 0.535289 2.3:+9209110 None:intergenic
AAGAGAAACAACGGATGGCT+GGG 0.537737 2.3:-9209075 MS.gene028827:CDS
GCTCAAGGGATTTGGAGGGT+TGG 0.539474 2.3:+9208262 None:intergenic
GATAAGAAGGGGTTGGAGAA+TGG 0.540938 2.3:-9209202 MS.gene028827:CDS
CAAATCACCAAAGGAGTTTG+CGG 0.541456 2.3:-9208540 MS.gene028827:CDS
GATGAAACACAAGCACGGTT+GGG 0.544423 2.3:-9208675 MS.gene028827:CDS
AGGGCAAGATGTTCATGTAA+TGG 0.545167 2.3:-9208471 MS.gene028827:CDS
CCAAGACGTTCAACATCCAC+TGG 0.547510 2.3:+9208641 None:intergenic
AATTTCCCCTTGCACAGGCA+AGG 0.547685 2.3:+9207650 None:intergenic
ACTCGAATTTCCCCTTGCAC+AGG 0.547795 2.3:+9207645 None:intergenic
ATTCGTCGAGTTTGTATCGT+AGG 0.549038 2.3:-9209306 MS.gene028827:CDS
TCATCACATCTCCTCAAAGC+TGG 0.550575 2.3:+9209223 None:intergenic
GTCTTTCTAGACAGAGGTGA+AGG 0.552966 2.3:+9208344 None:intergenic
TGTGAATTCTAGGTTGGATG+TGG 0.555876 2.3:-9209338 MS.gene028827:CDS
GATGTTGTTCAGCTGGAAGA+TGG 0.557828 2.3:-9209262 MS.gene028827:CDS
TTCCTCATGTCAAGAGGCGG+TGG 0.558440 2.3:+9208308 None:intergenic
ATCTCACATCCGATGGACTT+GGG 0.558638 2.3:-9208596 MS.gene028827:CDS
ACCTGCTTGTCTTTCTCTCG+GGG 0.559840 2.3:+9207784 None:intergenic
TATAGGGTTGATAATGGGAG+TGG 0.560910 2.3:-9209016 MS.gene028827:CDS
TATTATCATCTCACATCCGA+TGG 0.564977 2.3:-9208603 MS.gene028827:CDS
CGGATGGCTGGGAGGTATGG+TGG 0.565095 2.3:-9209064 MS.gene028827:CDS
GAGATACAGAGATACTCGGA+GGG 0.565135 2.3:-9209556 MS.gene028827:CDS
AAAGTTTGAGCAAATACAAG+AGG 0.565822 2.3:-9207977 MS.gene028827:CDS
GTAGCACCAGAATGAGTATG+AGG 0.566136 2.3:+9209469 None:intergenic
GTAAACCTATTAGCCTCTCT+CGG 0.567513 2.3:+9208953 None:intergenic
CCGCCACCGTCACTGTTGAT+GGG 0.567667 2.3:-9209444 MS.gene028827:CDS
GCCCCGAGAGAAAGACAAGC+AGG 0.568236 2.3:-9207785 MS.gene028827:intron
GGAGCCGAATTCCCATCCTC+CGG 0.571712 2.3:+9209367 None:intergenic
ATGTGATGATAAGAAGGGGT+TGG 0.572103 2.3:-9209209 MS.gene028827:CDS
ACATGATGATGAAATTGAAG+TGG 0.573976 2.3:-9208063 MS.gene028827:CDS
CTGGGTCTGATTCAGGGTCA+CGG 0.574527 2.3:-9207414 MS.gene028827:CDS
GGGGACTGTAGCTGAAGATA+AGG 0.578014 2.3:-9209587 MS.gene028827:CDS
TTGACATGAGGAATCTGGAT+AGG 0.578459 2.3:-9208298 MS.gene028827:CDS
GTGATAGCTCCTCATCGTCT+GGG 0.578733 2.3:-9207432 MS.gene028827:CDS
TTCTGCAGGTGTTCCGAGAG+AGG 0.582364 2.3:-9208966 MS.gene028827:CDS
CCCATCAACAGTGACGGTGG+CGG 0.584798 2.3:+9209444 None:intergenic
AGCTGAACGAGTCAAGCTCA+AGG 0.587721 2.3:+9208247 None:intergenic
TGAAGTGGACATTGATAGTG+TGG 0.589368 2.3:-9208048 MS.gene028827:CDS
AGATGTTCATGTAATGGCGG+AGG 0.593716 2.3:-9208465 MS.gene028827:CDS
GGGGATTAAGAGGAAGCTTG+AGG 0.595827 2.3:-9209137 MS.gene028827:CDS
ATGGTGTTAGAGAATGGTCA+TGG 0.597752 2.3:-9208914 MS.gene028827:CDS
TGAGCGAATTGCCCAGCAGA+AGG 0.599288 2.3:-9207919 MS.gene028827:intron
AGCTAAGCGCGCTCAATCTG+AGG 0.600369 2.3:-9208993 MS.gene028827:CDS
CCTTGCACAGGCAAGGATGG+GGG 0.601431 2.3:+9207657 None:intergenic
GGTGAAGGTGCAGATATAGC+GGG 0.603194 2.3:+9208359 None:intergenic
GAAGGAGAAGAGAACACCTA+AGG 0.603536 2.3:-9208873 MS.gene028827:CDS
TGGTGTTAGAGAATGGTCAT+GGG 0.603597 2.3:-9208913 MS.gene028827:CDS
AGGTGAAGGTGCAGATATAG+CGG 0.604052 2.3:+9208358 None:intergenic
GATTCTGGCTCTTCATCAAG+TGG 0.609326 2.3:-9207576 MS.gene028827:intron
CACGGTCAAAGCAAGAGATG+CGG 0.609503 2.3:-9209159 MS.gene028827:CDS
TAGAGAGATACAGAGATACT+CGG 0.610318 2.3:-9209560 MS.gene028827:CDS
GGCGTTGGAGAAATGGGACA+TGG 0.610803 2.3:-9208752 MS.gene028827:CDS
GGAGCTATCAGCATTATTCG+AGG 0.611908 2.3:-9208444 MS.gene028827:CDS
TTCACAGTACCCAAGTCCAT+CGG 0.615883 2.3:+9208587 None:intergenic
AGTATGAGGAACAACTTCCA+AGG 0.625080 2.3:+9209483 None:intergenic
CGGTCAAAGCAAGAGATGCG+GGG 0.626626 2.3:-9209157 MS.gene028827:CDS
CAAATTACAATCATGAGATG+AGG 0.627329 2.3:-9208400 MS.gene028827:CDS
GCTGAACGAGTCAAGCTCAA+GGG 0.627872 2.3:+9208248 None:intergenic
TCCAGATTCCTCATGTCAAG+AGG 0.627985 2.3:+9208302 None:intergenic
TTTGAGCAAATACAAGAGGA+AGG 0.629083 2.3:-9207973 MS.gene028827:CDS
TTGGGTGTTTAATACTCCAG+TGG 0.632618 2.3:-9208657 MS.gene028827:CDS
GGCCACCGCCTCTTGACATG+AGG 0.633195 2.3:-9208310 MS.gene028827:CDS
GCAGGAGTCTTTCTAGACAG+AGG 0.633710 2.3:+9208338 None:intergenic
AAATCACATGGAAAGAAGCA+TGG 0.633912 2.3:-9208773 MS.gene028827:CDS
TGGTGGTTTGAATGTGTCTG+TGG 0.636743 2.3:-9209044 MS.gene028827:CDS
AACAAGAAGTCAAAATCACA+TGG 0.638541 2.3:-9208785 MS.gene028827:CDS
TTCTTGTTACTCTCTGCAGG+CGG 0.647277 2.3:+9208800 None:intergenic
TCAAGCTCAAGGGATTTGGA+GGG 0.651277 2.3:+9208258 None:intergenic
CGTCCCATCAACAGTGACGG+TGG 0.653161 2.3:+9209441 None:intergenic
CTTCGTCCCATCAACAGTGA+CGG 0.654668 2.3:+9209438 None:intergenic
TGAATCAGACCCAGACGATG+AGG 0.655171 2.3:+9207423 None:intergenic
ATGGCTGGGAGGTATGGTGG+TGG 0.655927 2.3:-9209061 MS.gene028827:CDS
GGTCAAAGCAAGAGATGCGG+GGG 0.657112 2.3:-9209156 MS.gene028827:CDS
AACCTAGAATTCACAACCGG+CGG 0.665880 2.3:+9209346 None:intergenic
GAATGGTGTTAAGAATGGAC+TGG 0.666740 2.3:-9209185 MS.gene028827:CDS
GCAAGATGTTCATGTAATGG+CGG 0.668019 2.3:-9208468 MS.gene028827:CDS
AGGGCGACCTTGAAATGGTG+AGG 0.669484 2.3:-9209117 MS.gene028827:CDS
CGTCACTGTTGATGGGACGA+AGG 0.671055 2.3:-9209437 MS.gene028827:CDS
ATCACCAAAGGAGTTTGCGG+AGG 0.671626 2.3:-9208537 MS.gene028827:CDS
AGATTCCTCATGTCAAGAGG+CGG 0.676274 2.3:+9208305 None:intergenic
GATTGAAGAGAAACAACGGA+TGG 0.679746 2.3:-9209080 MS.gene028827:CDS
GGGGCATCAACTATAACTGG+TGG 0.680239 2.3:+9207803 None:intergenic
TAAAAGAGACATGACATACG+AGG 0.688614 2.3:-9208183 MS.gene028827:CDS
GAATTGGTACAAATCACCAA+AGG 0.690101 2.3:-9208549 MS.gene028827:CDS
AGAAACAACGGATGGCTGGG+AGG 0.697772 2.3:-9209072 MS.gene028827:CDS
AAGTTGATGAAACACAAGCA+CGG 0.699310 2.3:-9208680 MS.gene028827:CDS
AGAGATACAGAGATACTCGG+AGG 0.700043 2.3:-9209557 MS.gene028827:CDS
TTAGGATTGAAGAGAAACAA+CGG 0.702409 2.3:-9209084 MS.gene028827:CDS
ACTTGGGTACTGTGAAGTCG+AGG 0.713645 2.3:-9208580 MS.gene028827:CDS
AGATACAGAGATACTCGGAG+GGG 0.714927 2.3:-9209555 MS.gene028827:CDS
GGAGATGTGATGATAAGAAG+GGG 0.717368 2.3:-9209213 MS.gene028827:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTTCAAAGTTTCAG+AGG - chr2.3:9207488-9207507 MS.gene028827:intron 20.0%
!! ACCTTGTATAACATAAATTA+TGG + chr2.3:9209488-9209507 None:intergenic 20.0%
!! ATTGTAATTTGACTCTATAA+TGG + chr2.3:9208597-9208616 None:intergenic 20.0%
!! CCTTGTATAACATAAATTAT+GGG + chr2.3:9209487-9209506 None:intergenic 20.0%
! AAATTCGAGTCGATAATAAT+GGG - chr2.3:9209374-9209393 MS.gene028827:CDS 25.0%
! CCCATAATTTATGTTATACA+AGG - chr2.3:9209484-9209503 MS.gene028827:CDS 25.0%
! GATCATTAAGAAACGAAATT+CGG - chr2.3:9208910-9208929 MS.gene028827:CDS 25.0%
! TTCAATTTCATCATCATGTT+GGG + chr2.3:9208942-9208961 None:intergenic 25.0%
! TTTGAATAAAAGTAAAAGCC+AGG + chr2.3:9209514-9209533 None:intergenic 25.0%
AAAGTTTGAGCAAATACAAG+AGG - chr2.3:9209029-9209048 MS.gene028827:CDS 30.0%
AAATTATTTGCCAAAGACAC+TGG + chr2.3:9209141-9209160 None:intergenic 30.0%
AACAAGAAGTCAAAATCACA+TGG - chr2.3:9208221-9208240 MS.gene028827:CDS 30.0%
AGAGGATAAAGTTAATTCCT+TGG - chr2.3:9207506-9207525 MS.gene028827:intron 30.0%
CAAATTACAATCATGAGATG+AGG - chr2.3:9208606-9208625 MS.gene028827:CDS 30.0%
CCATGACATATAATCCTAAA+GGG - chr2.3:9208516-9208535 MS.gene028827:CDS 30.0%
CTTCAATTTCATCATCATGT+TGG + chr2.3:9208943-9208962 None:intergenic 30.0%
GAAATTCGAGTCGATAATAA+TGG - chr2.3:9209373-9209392 MS.gene028827:CDS 30.0%
TTAGGATTGAAGAGAAACAA+CGG - chr2.3:9207922-9207941 MS.gene028827:CDS 30.0%
! ACATGATGATGAAATTGAAG+TGG - chr2.3:9208943-9208962 MS.gene028827:CDS 30.0%
! GCTCAAACTTTTCTTATAGT+TGG + chr2.3:9209020-9209039 None:intergenic 30.0%
! TATGTCATGTCTCTTTTATC+AGG + chr2.3:9208821-9208840 None:intergenic 30.0%
!! ATCGTTATAGGGTTGATAAT+GGG - chr2.3:9207985-9208004 MS.gene028827:CDS 30.0%
!!! ACAATAGCATCTAGTTTTTC+AGG + chr2.3:9208887-9208906 None:intergenic 30.0%
AAATCACATGGAAAGAAGCA+TGG - chr2.3:9208233-9208252 MS.gene028827:CDS 35.0%
AGCATTATTCGAGGAAAGAT+GGG - chr2.3:9208571-9208590 MS.gene028827:CDS 35.0%
AGGAGATGTGATGATAAGAA+GGG - chr2.3:9207792-9207811 MS.gene028827:CDS 35.0%
ATGAGGTATGGCTTGAATTA+TGG - chr2.3:9208623-9208642 MS.gene028827:CDS 35.0%
ATTCCGAATTGGAATAGAAC+TGG + chr2.3:9208163-9208182 None:intergenic 35.0%
CAACAATAATAGTCCACAAG+CGG + chr2.3:9209252-9209271 None:intergenic 35.0%
CGTTTAATATCCAGTGTCTT+TGG - chr2.3:9209128-9209147 MS.gene028827:CDS 35.0%
CTAACACCATTACACTTAAC+TGG + chr2.3:9208082-9208101 None:intergenic 35.0%
GAACCAGTTCTATTCCAATT+CGG - chr2.3:9208157-9208176 MS.gene028827:CDS 35.0%
GAATTGGTACAAATCACCAA+AGG - chr2.3:9208457-9208476 MS.gene028827:CDS 35.0%
GCCATGACATATAATCCTAA+AGG - chr2.3:9208515-9208534 MS.gene028827:CDS 35.0%
TAAAAGAGACATGACATACG+AGG - chr2.3:9208823-9208842 MS.gene028827:CDS 35.0%
TAATGTTTCGGTTCAACAGT+TGG - chr2.3:9207602-9207621 MS.gene028827:CDS 35.0%
TACAATCATGAGATGAGGTA+TGG - chr2.3:9208611-9208630 MS.gene028827:CDS 35.0%
TAGAGAGATACAGAGATACT+CGG - chr2.3:9207446-9207465 MS.gene028827:intron 35.0%
TATGTTATACAAGGTCAACC+TGG - chr2.3:9209493-9209512 MS.gene028827:CDS 35.0%
TATTATCATCTCACATCCGA+TGG - chr2.3:9208403-9208422 MS.gene028827:CDS 35.0%
TGAGGTATGGCTTGAATTAT+GGG - chr2.3:9208624-9208643 MS.gene028827:CDS 35.0%
TTTGAGCAAATACAAGAGGA+AGG - chr2.3:9209033-9209052 MS.gene028827:CDS 35.0%
! AGTGTAATGGTGTTAGAGAA+TGG - chr2.3:9208086-9208105 MS.gene028827:CDS 35.0%
! ATTTGTTAGAACCAGCTTTG+AGG - chr2.3:9207772-9207791 MS.gene028827:intron 35.0%
! TCAACAGTTGGATAGTGTTT+TGG - chr2.3:9207614-9207633 MS.gene028827:CDS 35.0%
! TCTAGCTTGAATAGCAAGTT+CGG + chr2.3:9209059-9209078 None:intergenic 35.0%
! TGTCAATTTTACCTTCTGCT+GGG + chr2.3:9209101-9209120 None:intergenic 35.0%
! TTGGAGAATGGTGTTAAGAA+TGG - chr2.3:9207816-9207835 MS.gene028827:intron 35.0%
! TTGTCAATTTTACCTTCTGC+TGG + chr2.3:9209102-9209121 None:intergenic 35.0%
!! AAGTTGATGAAACACAAGCA+CGG - chr2.3:9208326-9208345 MS.gene028827:CDS 35.0%
!! CCCTTTAGGATTATATGTCA+TGG + chr2.3:9208519-9208538 None:intergenic 35.0%
!! GATCGTTATAGGGTTGATAA+TGG - chr2.3:9207984-9208003 MS.gene028827:CDS 35.0%
!! GATTAGTGAAAGTGTTGAGA+AGG - chr2.3:9208115-9208134 MS.gene028827:CDS 35.0%
!! GGATAACGGGAATAATGTTT+CGG - chr2.3:9207590-9207609 MS.gene028827:CDS 35.0%
!!! ATAGCATCTAGTTTTTCAGG+TGG + chr2.3:9208884-9208903 None:intergenic 35.0%
ACATGAACATCTTGCCCTTT+AGG + chr2.3:9208533-9208552 None:intergenic 40.0%
AGGGCAAGATGTTCATGTAA+TGG - chr2.3:9208535-9208554 MS.gene028827:CDS 40.0%
AGTATGAGGAACAACTTCCA+AGG + chr2.3:9207526-9207545 None:intergenic 40.0%
ATACCTGCTTGTCTTTCTCT+CGG + chr2.3:9209227-9209246 None:intergenic 40.0%
ATGTGATGATAAGAAGGGGT+TGG - chr2.3:9207797-9207816 MS.gene028827:CDS 40.0%
ATGTGTCTGTGGATCGTTAT+AGG - chr2.3:9207973-9207992 MS.gene028827:CDS 40.0%
ATTCGTCGAGTTTGTATCGT+AGG - chr2.3:9207700-9207719 MS.gene028827:intron 40.0%
CAAATCACCAAAGGAGTTTG+CGG - chr2.3:9208466-9208485 MS.gene028827:CDS 40.0%
CAACTATAACTGGTGGTTCT+TGG + chr2.3:9209199-9209218 None:intergenic 40.0%
CAGCATTATTCGAGGAAAGA+TGG - chr2.3:9208570-9208589 MS.gene028827:CDS 40.0%
GAGAAATGGGACATGGATTT+GGG - chr2.3:9208261-9208280 MS.gene028827:CDS 40.0%
GAGGAGATGTGATGATAAGA+AGG - chr2.3:9207791-9207810 MS.gene028827:CDS 40.0%
GATTGAAGAGAAACAACGGA+TGG - chr2.3:9207926-9207945 MS.gene028827:CDS 40.0%
GCAAGATGTTCATGTAATGG+CGG - chr2.3:9208538-9208557 MS.gene028827:CDS 40.0%
GGAGATGTGATGATAAGAAG+GGG - chr2.3:9207793-9207812 MS.gene028827:CDS 40.0%
GTTGTTCCTCATACTCATTC+TGG - chr2.3:9207531-9207550 MS.gene028827:intron 40.0%
TACACGCCAGTTAAGTGTAA+TGG - chr2.3:9208073-9208092 MS.gene028827:CDS 40.0%
TCCAACCTAGAATTCACAAC+CGG + chr2.3:9207666-9207685 None:intergenic 40.0%
TGTGTCTGTGGATCGTTATA+GGG - chr2.3:9207974-9207993 MS.gene028827:CDS 40.0%
TTATCAGGATCGTTTGCCTT+CGG + chr2.3:9208806-9208825 None:intergenic 40.0%
TTGACATGAGGAATCTGGAT+AGG - chr2.3:9208708-9208727 MS.gene028827:CDS 40.0%
TTGGGTGTTTAATACTCCAG+TGG - chr2.3:9208349-9208368 MS.gene028827:CDS 40.0%
! ATGGTGTTAGAGAATGGTCA+TGG - chr2.3:9208092-9208111 MS.gene028827:CDS 40.0%
! GAATGGTGTTAAGAATGGAC+TGG - chr2.3:9207821-9207840 MS.gene028827:intron 40.0%
! GTAAACCTATTAGCCTCTCT+CGG + chr2.3:9208056-9208075 None:intergenic 40.0%
! TAGTCTTGATGTTGTTCAGC+TGG - chr2.3:9207737-9207756 MS.gene028827:intron 40.0%
! TGGTGTTAGAGAATGGTCAT+GGG - chr2.3:9208093-9208112 MS.gene028827:CDS 40.0%
! TGTGAATTCTAGGTTGGATG+TGG - chr2.3:9207668-9207687 MS.gene028827:CDS 40.0%
!! TATAGGGTTGATAATGGGAG+TGG - chr2.3:9207990-9208009 MS.gene028827:CDS 40.0%
!! TGAAGTGGACATTGATAGTG+TGG - chr2.3:9208958-9208977 MS.gene028827:CDS 40.0%
!! TTAAGAATGGACTGGCTTCA+CGG - chr2.3:9207829-9207848 MS.gene028827:intron 40.0%
!!! GTTGGATAGTGTTTTGGTTC+CGG - chr2.3:9207620-9207639 MS.gene028827:CDS 40.0%
AACCTAGAATTCACAACCGG+CGG + chr2.3:9207663-9207682 None:intergenic 45.0%
AAGAGAAACAACGGATGGCT+GGG - chr2.3:9207931-9207950 MS.gene028827:CDS 45.0%
AGAGATACAGAGATACTCGG+AGG - chr2.3:9207449-9207468 MS.gene028827:intron 45.0%
AGATACAGAGATACTCGGAG+GGG - chr2.3:9207451-9207470 MS.gene028827:intron 45.0%
AGATGTTCATGTAATGGCGG+AGG - chr2.3:9208541-9208560 MS.gene028827:CDS 45.0%
AGATTCCTCATGTCAAGAGG+CGG + chr2.3:9208704-9208723 None:intergenic 45.0%
CCAACAACCTCACCATTTCA+AGG + chr2.3:9207899-9207918 None:intergenic 45.0%
CCTTGAAATGGTGAGGTTGT+TGG - chr2.3:9207896-9207915 MS.gene028827:intron 45.0%
CGCAAGCAAGAATTCCGAAT+TGG + chr2.3:9208174-9208193 None:intergenic 45.0%
CTAGAAAGACTCCTGCTTTG+CGG - chr2.3:9208675-9208694 MS.gene028827:CDS 45.0%
GAAGGAGAAGAGAACACCTA+AGG - chr2.3:9208133-9208152 MS.gene028827:CDS 45.0%
GACTTCTTGTTACTCTCTGC+AGG + chr2.3:9208212-9208231 None:intergenic 45.0%
GAGAGAAAGACAAGCAGGTA+TGG - chr2.3:9209226-9209245 MS.gene028827:CDS 45.0%
GAGATACAGAGATACTCGGA+GGG - chr2.3:9207450-9207469 MS.gene028827:intron 45.0%
GATAAGAAGGGGTTGGAGAA+TGG - chr2.3:9207804-9207823 MS.gene028827:CDS 45.0%
GATGAAACACAAGCACGGTT+GGG - chr2.3:9208331-9208350 MS.gene028827:CDS 45.0%
GATGTTGTTCAGCTGGAAGA+TGG - chr2.3:9207744-9207763 MS.gene028827:intron 45.0%
GGAGAAATGGGACATGGATT+TGG - chr2.3:9208260-9208279 MS.gene028827:CDS 45.0%
GGAGCTATCAGCATTATTCG+AGG - chr2.3:9208562-9208581 MS.gene028827:CDS 45.0%
GGGATTAAGAGGAAGCTTGA+GGG - chr2.3:9207870-9207889 MS.gene028827:intron 45.0%
GTAGCACCAGAATGAGTATG+AGG + chr2.3:9207540-9207559 None:intergenic 45.0%
GTCTTTCTAGACAGAGGTGA+AGG + chr2.3:9208665-9208684 None:intergenic 45.0%
TACCTGCTTGTCTTTCTCTC+GGG + chr2.3:9209226-9209245 None:intergenic 45.0%
TCAAGCTCAAGGGATTTGGA+GGG + chr2.3:9208751-9208770 None:intergenic 45.0%
TCATCACATCTCCTCAAAGC+TGG + chr2.3:9207786-9207805 None:intergenic 45.0%
TCCAGATTCCTCATGTCAAG+AGG + chr2.3:9208707-9208726 None:intergenic 45.0%
TGATGAAACACAAGCACGGT+TGG - chr2.3:9208330-9208349 MS.gene028827:CDS 45.0%
TGGTGGTTTGAATGTGTCTG+TGG - chr2.3:9207962-9207981 MS.gene028827:CDS 45.0%
TGTGGATGCAGAGACTCTTT+GGG - chr2.3:9208976-9208995 MS.gene028827:CDS 45.0%
TTCACAGTACCCAAGTCCAT+CGG + chr2.3:9208422-9208441 None:intergenic 45.0%
TTCTTGTTACTCTCTGCAGG+CGG + chr2.3:9208209-9208228 None:intergenic 45.0%
TTGATGGGACGAAGGATAAC+GGG - chr2.3:9207577-9207596 MS.gene028827:CDS 45.0%
! AAGCATGGCGTTGGAGAAAT+GGG - chr2.3:9208248-9208267 MS.gene028827:CDS 45.0%
! AGGTGAAGGTGCAGATATAG+CGG + chr2.3:9208651-9208670 None:intergenic 45.0%
! ATCTCACATCCGATGGACTT+GGG - chr2.3:9208410-9208429 MS.gene028827:CDS 45.0%
! GTTGATGGGACGAAGGATAA+CGG - chr2.3:9207576-9207595 MS.gene028827:intron 45.0%
!! GAATAGAACTGGTTCGCCTT+AGG + chr2.3:9208152-9208171 None:intergenic 45.0%
!! GATTCTGGCTCTTCATCAAG+TGG - chr2.3:9209430-9209449 MS.gene028827:CDS 45.0%
!! TGGTGAGGTTGTTGGTGATT+AGG - chr2.3:9207904-9207923 MS.gene028827:intron 45.0%
!!! TCGTTTGCCTTCGGCTTTTT+TGG + chr2.3:9208797-9208816 None:intergenic 45.0%
AAGAGATGCGGGGGATTAAG+AGG - chr2.3:9207859-9207878 MS.gene028827:intron 50.0%
AATTTCCCCTTGCACAGGCA+AGG + chr2.3:9209359-9209378 None:intergenic 50.0%
ACATCCTCCGCAAACTCCTT+TGG + chr2.3:9208476-9208495 None:intergenic 50.0%
ACCTGCTTGTCTTTCTCTCG+GGG + chr2.3:9209225-9209244 None:intergenic 50.0%
ACGGTCAAAGCAAGAGATGC+GGG - chr2.3:9207848-9207867 MS.gene028827:intron 50.0%
ACTCGAATTTCCCCTTGCAC+AGG + chr2.3:9209364-9209383 None:intergenic 50.0%
AGCAGCTCAAGCAGTGATTC+TGG - chr2.3:9209415-9209434 MS.gene028827:CDS 50.0%
AGCTGAACGAGTCAAGCTCA+AGG + chr2.3:9208762-9208781 None:intergenic 50.0%
AGTCGAGGCTGAGCAAGAAT+TGG - chr2.3:9208441-9208460 MS.gene028827:CDS 50.0%
AGTGATAGCTCCTCATCGTC+TGG - chr2.3:9209573-9209592 MS.gene028827:CDS 50.0%
ATCACCAAAGGAGTTTGCGG+AGG - chr2.3:9208469-9208488 MS.gene028827:CDS 50.0%
CACGGTCAAAGCAAGAGATG+CGG - chr2.3:9207847-9207866 MS.gene028827:intron 50.0%
CATCGTCTGGGTCTGATTCA+GGG - chr2.3:9209586-9209605 MS.gene028827:CDS 50.0%
CCAAGACGTTCAACATCCAC+TGG + chr2.3:9208368-9208387 None:intergenic 50.0%
CCAGTGGATGTTGAACGTCT+TGG - chr2.3:9208365-9208384 MS.gene028827:CDS 50.0%
CGAGTCAAGCTCAAGGGATT+TGG + chr2.3:9208755-9208774 None:intergenic 50.0%
CTTCGTCCCATCAACAGTGA+CGG + chr2.3:9207571-9207590 None:intergenic 50.0%
GAAGAGAAACAACGGATGGC+TGG - chr2.3:9207930-9207949 MS.gene028827:CDS 50.0%
GCAGGAGTCTTTCTAGACAG+AGG + chr2.3:9208671-9208690 None:intergenic 50.0%
GCCGGTTGTGAATTCTAGGT+TGG - chr2.3:9207662-9207681 MS.gene028827:CDS 50.0%
GCCTCTTGACATGAGGAATC+TGG - chr2.3:9208703-9208722 MS.gene028827:CDS 50.0%
GCTGAACGAGTCAAGCTCAA+GGG + chr2.3:9208761-9208780 None:intergenic 50.0%
GGGGACTGTAGCTGAAGATA+AGG - chr2.3:9207419-9207438 MS.gene028827:CDS 50.0%
GGGGATTAAGAGGAAGCTTG+AGG - chr2.3:9207869-9207888 MS.gene028827:intron 50.0%
GTCAAGCTCAAGGGATTTGG+AGG + chr2.3:9208752-9208771 None:intergenic 50.0%
GTCGAGTTTGTATCGTAGGC+AGG - chr2.3:9207704-9207723 MS.gene028827:intron 50.0%
GTGATAGCTCCTCATCGTCT+GGG - chr2.3:9209574-9209593 MS.gene028827:CDS 50.0%
GTGTGGATGCAGAGACTCTT+TGG - chr2.3:9208975-9208994 MS.gene028827:CDS 50.0%
GTGTTCCGAGAGAGGCTAAT+AGG - chr2.3:9208048-9208067 MS.gene028827:CDS 50.0%
TCATCGTCTGGGTCTGATTC+AGG - chr2.3:9209585-9209604 MS.gene028827:CDS 50.0%
TCCTGCTCCAAAAAAGCCGA+AGG - chr2.3:9208787-9208806 MS.gene028827:CDS 50.0%
TGAATCAGACCCAGACGATG+AGG + chr2.3:9209586-9209605 None:intergenic 50.0%
! ACTTGGGTACTGTGAAGTCG+AGG - chr2.3:9208426-9208445 MS.gene028827:CDS 50.0%
! CAATCTGAGGTAGCTTCTGC+AGG - chr2.3:9208026-9208045 MS.gene028827:CDS 50.0%
! CATCTCACATCCGATGGACT+TGG - chr2.3:9208409-9208428 MS.gene028827:CDS 50.0%
! CATGGAAAGAAGCATGGCGT+TGG - chr2.3:9208239-9208258 MS.gene028827:CDS 50.0%
! CTCGGGGCATCAACTATAAC+TGG + chr2.3:9209209-9209228 None:intergenic 50.0%
! GAAGCATGGCGTTGGAGAAA+TGG - chr2.3:9208247-9208266 MS.gene028827:CDS 50.0%
! GGGGCATCAACTATAACTGG+TGG + chr2.3:9209206-9209225 None:intergenic 50.0%
! GGTGAAGGTGCAGATATAGC+GGG + chr2.3:9208650-9208669 None:intergenic 50.0%
!!! AGTGTTTTGGTTCCGGAGGA+TGG - chr2.3:9207627-9207646 MS.gene028827:CDS 50.0%
!!! GGATAGTGTTTTGGTTCCGG+AGG - chr2.3:9207623-9207642 MS.gene028827:CDS 50.0%
!!! GTGTTTTGGTTCCGGAGGAT+GGG - chr2.3:9207628-9207647 MS.gene028827:CDS 50.0%
AGAAACAACGGATGGCTGGG+AGG - chr2.3:9207934-9207953 MS.gene028827:CDS 55.0%
AGCTAAGCGCGCTCAATCTG+AGG - chr2.3:9208013-9208032 MS.gene028827:CDS 55.0%
AGGGCGACCTTGAAATGGTG+AGG - chr2.3:9207889-9207908 MS.gene028827:intron 55.0%
CGGTCAAAGCAAGAGATGCG+GGG - chr2.3:9207849-9207868 MS.gene028827:intron 55.0%
CTGGGTCTGATTCAGGGTCA+CGG - chr2.3:9209592-9209611 MS.gene028827:CDS 55.0%
GCTCAAGGGATTTGGAGGGT+TGG + chr2.3:9208747-9208766 None:intergenic 55.0%
GCTTGAGGGCGACCTTGAAA+TGG - chr2.3:9207884-9207903 MS.gene028827:intron 55.0%
GGTCAAAGCAAGAGATGCGG+GGG - chr2.3:9207850-9207869 MS.gene028827:intron 55.0%
GGTTCCGGAGGATGGGAATT+CGG - chr2.3:9207635-9207654 MS.gene028827:CDS 55.0%
TGAGCGAATTGCCCAGCAGA+AGG - chr2.3:9209087-9209106 MS.gene028827:CDS 55.0%
TTCCTCATGTCAAGAGGCGG+TGG + chr2.3:9208701-9208720 None:intergenic 55.0%
TTCTGCAGGTGTTCCGAGAG+AGG - chr2.3:9208040-9208059 MS.gene028827:CDS 55.0%
! CGTCACTGTTGATGGGACGA+AGG - chr2.3:9207569-9207588 MS.gene028827:intron 55.0%
! CTCCGCCGGTTGTGAATTCT+AGG - chr2.3:9207658-9207677 MS.gene028827:CDS 55.0%
! GGCGTTGGAGAAATGGGACA+TGG - chr2.3:9208254-9208273 MS.gene028827:CDS 55.0%
!! CTGGTGGTTCTTGGCTCTAC+AGG + chr2.3:9209190-9209209 None:intergenic 55.0%
!!! GCCTTCGGCTTTTTTGGAGC+AGG + chr2.3:9208791-9208810 None:intergenic 55.0%
ACCGCCACCGTCACTGTTGA+TGG - chr2.3:9207561-9207580 MS.gene028827:intron 60.0%
CAACGGATGGCTGGGAGGTA+TGG - chr2.3:9207939-9207958 MS.gene028827:CDS 60.0%
CAAGCAGGTATGGCCGCTTG+TGG - chr2.3:9209236-9209255 MS.gene028827:CDS 60.0%
CCCATCAACAGTGACGGTGG+CGG + chr2.3:9207565-9207584 None:intergenic 60.0%
CCCATCCTTGCCTGTGCAAG+GGG - chr2.3:9209351-9209370 MS.gene028827:CDS 60.0%
CCCCATCCTTGCCTGTGCAA+GGG - chr2.3:9209350-9209369 MS.gene028827:CDS 60.0%
CCCCTTGCACAGGCAAGGAT+GGG + chr2.3:9209354-9209373 None:intergenic 60.0%
CCCTTGCACAGGCAAGGATG+GGG + chr2.3:9209353-9209372 None:intergenic 60.0%
CCGCCACCGTCACTGTTGAT+GGG - chr2.3:9207562-9207581 MS.gene028827:intron 60.0%
CCTTGCACAGGCAAGGATGG+GGG + chr2.3:9209352-9209371 None:intergenic 60.0%
CGTCCCATCAACAGTGACGG+TGG + chr2.3:9207568-9207587 None:intergenic 60.0%
GCCCCGAGAGAAAGACAAGC+AGG - chr2.3:9209221-9209240 MS.gene028827:CDS 60.0%
GGAGCCGAATTCCCATCCTC+CGG + chr2.3:9207642-9207661 None:intergenic 60.0%
TCCCCTTGCACAGGCAAGGA+TGG + chr2.3:9209355-9209374 None:intergenic 60.0%
! ATCAACAGTGACGGTGGCGG+TGG + chr2.3:9207562-9207581 None:intergenic 60.0%
! ATGGCTGGGAGGTATGGTGG+TGG - chr2.3:9207945-9207964 MS.gene028827:CDS 60.0%
CCCCCATCCTTGCCTGTGCA+AGG - chr2.3:9209349-9209368 MS.gene028827:CDS 65.0%
GGATGGGAATTCGGCTCCGC+CGG - chr2.3:9207644-9207663 MS.gene028827:CDS 65.0%
GGCCACCGCCTCTTGACATG+AGG - chr2.3:9208696-9208715 MS.gene028827:CDS 65.0%
! CGGATGGCTGGGAGGTATGG+TGG - chr2.3:9207942-9207961 MS.gene028827:CDS 65.0%
AGAGGCGGTGGCCGCAAAGC+AGG + chr2.3:9208689-9208708 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 9207411 9209617 9207411 ID=MS.gene028827
chr2.3 mRNA 9207411 9209617 9207411 ID=MS.gene028827.t1;Parent=MS.gene028827
chr2.3 exon 9207920 9209617 9207920 ID=MS.gene028827.t1.exon1;Parent=MS.gene028827.t1
chr2.3 CDS 9207920 9209617 9207920 ID=cds.MS.gene028827.t1;Parent=MS.gene028827.t1
chr2.3 exon 9207786 9207834 9207786 ID=MS.gene028827.t1.exon2;Parent=MS.gene028827.t1
chr2.3 CDS 9207786 9207834 9207786 ID=cds.MS.gene028827.t1;Parent=MS.gene028827.t1
chr2.3 exon 9207577 9207693 9207577 ID=MS.gene028827.t1.exon3;Parent=MS.gene028827.t1
chr2.3 CDS 9207577 9207693 9207577 ID=cds.MS.gene028827.t1;Parent=MS.gene028827.t1
chr2.3 exon 9207411 9207463 9207411 ID=MS.gene028827.t1.exon4;Parent=MS.gene028827.t1
chr2.3 CDS 9207411 9207463 9207411 ID=cds.MS.gene028827.t1;Parent=MS.gene028827.t1
Gene Sequence

>MS.gene028827

ATGGATTCGGGGACTGTAGCTGAAGATAAGGTAGTTAGAGAGATACAGAGATACTCGGAGGGGAAAGTTTACACGAGAAAAAATTTCAAAGTTTCAGAGGATAAAGTTAATTCCTTGGAAGTTGTTCCTCATACTCATTCTGGTGCTACCACCGCCACCGTCACTGTTGATGGGACGAAGGATAACGGGAATAATGTTTCGGTTCAACAGTTGGATAGTGTTTTGGTTCCGGAGGATGGGAATTCGGCTCCGCCGGTTGTGAATTCTAGGTTGGATGTGGTTTCTGAAGATTCGTCGAGTTTGTATCGTAGGCAGGATGAACATTTTAGTCTTGATGTTGTTCAGCTGGAAGATGGTAATGATTTGTTAGAACCAGCTTTGAGGAGATGTGATGATAAGAAGGGGTTGGAGAATGGTGTTAAGAATGGACTGGCTTCACGGTCAAAGCAAGAGATGCGGGGGATTAAGAGGAAGCTTGAGGGCGACCTTGAAATGGTGAGGTTGTTGGTGATTAGGATTGAAGAGAAACAACGGATGGCTGGGAGGTATGGTGGTGGTTTGAATGTGTCTGTGGATCGTTATAGGGTTGATAATGGGAGTGGAGCTAAGCGCGCTCAATCTGAGGTAGCTTCTGCAGGTGTTCCGAGAGAGGCTAATAGGTTTACACGCCAGTTAAGTGTAATGGTGTTAGAGAATGGTCATGGGATTAGTGAAAGTGTTGAGAAGGAGAAGAGAACACCTAAGGCGAACCAGTTCTATTCCAATTCGGAATTCTTGCTTGCGAAAGATAAGTTTCCGCCTGCAGAGAGTAACAAGAAGTCAAAATCACATGGAAAGAAGCATGGCGTTGGAGAAATGGGACATGGATTTGGGATAGTATCGAAGTATTTGAAGAACTGTAGCTCATTGCTTGAAAAGTTGATGAAACACAAGCACGGTTGGGTGTTTAATACTCCAGTGGATGTTGAACGTCTTGGTTTGCATGATTATTTTATTATCATCTCACATCCGATGGACTTGGGTACTGTGAAGTCGAGGCTGAGCAAGAATTGGTACAAATCACCAAAGGAGTTTGCGGAGGATGTGAGACTTACTTTTCGTAATGCCATGACATATAATCCTAAAGGGCAAGATGTTCATGTAATGGCGGAGGAGCTATCAGCATTATTCGAGGAAAGATGGGCCATTATAGAGTCAAATTACAATCATGAGATGAGGTATGGCTTGAATTATGGGCCCGCTATATCTGCACCTTCACCTCTGTCTAGAAAGACTCCTGCTTTGCGGCCACCGCCTCTTGACATGAGGAATCTGGATAGGTCAGAATCAATAACCAACCCTCCAAATCCCTTGAGCTTGACTCGTTCAGCTCGAACTCCTGCTCCAAAAAAGCCGAAGGCAAACGATCCTGATAAAAGAGACATGACATACGAGGAAAAGCAAAAACTTAGCACACATCTTCAGAATCTACCACCTGAAAAACTAGATGCTATTGTACAGATCATTAAGAAACGAAATTCGGCACTTTCCCAACATGATGATGAAATTGAAGTGGACATTGATAGTGTGGATGCAGAGACTCTTTGGGAGCTTGATAGATATGTTACCAACTATAAGAAAAGTTTGAGCAAATACAAGAGGAAGGCCGAACTTGCTATTCAAGCTAGAGCAGAAGCTGAGCGAATTGCCCAGCAGAAGGTAAAATTGACAATTTCAACGTTTAATATCCAGTGTCTTTGGCAAATAATTTTTACTCATTGAATTTATTTCATGCTTCCTGTAGAGCCAAGAACCACCAGTTATAGTTGATGCCCCGAGAGAAAGACAAGCAGGTATGGCCGCTTGTGGACTATTATTGTTGATTTCTTATCATCATTCATCAATTAAATTAATTGAAATATTTTGTCTGCTTGTTTCTGAGCAGATGAAAGAAATGCTCCCCCATCCTTGCCTGTGCAAGGGGAAATTCGAGTCGATAATAATGGGAGTAAGACAAGCAGCTCAAGCAGCTCAAGCAGTGATTCTGGCTCTTCATCAAGTGGTATATTAAATAATTATTTAACAGATATCTGTCCCATAATTTATGTTATACAAGGTCAACCTGGCTTTTACTTTTATTCAAATTTAATGTTTGATAATAATGTGCTTTTGCAGATTCTGATAGTGATAGCTCCTCATCGTCTGGGTCTGATTCAGGGTCACGGTGA
Protein sequence

>MS.gene028827.t1

MDSGTVAEDKVVREIQRYSEGKVYTRKNFKVSEDKVNSLEVVPHTHSGATTATVTVDGTKDNGNNVSVQQLDSVLVPEDGNSAPPVVNSRLDVVSEDSSSLYRRQDEHFSLDVVQLEDGNDLLEPALRRCDDKKGLENGVKNGLASRSKQEMRGIKRKLEGDLEMVRLLVIRIEEKQRMAGRYGGGLNVSVDRYRVDNGSGAKRAQSEVASAGVPREANRFTRQLSVMVLENGHGISESVEKEKRTPKANQFYSNSEFLLAKDKFPPAESNKKSKSHGKKHGVGEMGHGFGIVSKYLKNCSSLLEKLMKHKHGWVFNTPVDVERLGLHDYFIIISHPMDLGTVKSRLSKNWYKSPKEFAEDVRLTFRNAMTYNPKGQDVHVMAEELSALFEERWAIIESNYNHEMRYGLNYGPAISAPSPLSRKTPALRPPPLDMRNLDRSESITNPPNPLSLTRSARTPAPKKPKANDPDKRDMTYEEKQKLSTHLQNLPPEKLDAIVQIIKKRNSALSQHDDEIEVDIDSVDAETLWELDRYVTNYKKSLSKYKRKAELAIQARAEAERIAQQKSQEPPVIVDAPRERQADERNAPPSLPVQGEIRVDNNGSKTSSSSSSSSDSGSSSSDSDSDSSSSSGSDSGSR