Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029222.t1 | XP_003592715.1 | 99.4 | 773 | 5 | 0 | 1 | 773 | 1 | 773 | 0.00E+00 | 1395.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029222.t1 | Q93ZY3 | 84.5 | 769 | 113 | 3 | 8 | 773 | 13 | 778 | 0.0e+00 | 1209.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029222.t1 | G7IE81 | 99.4 | 773 | 5 | 0 | 1 | 773 | 1 | 773 | 0.0e+00 | 1395.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029222 | MS.gene37721 | PPI |
| MS.gene029222 | MS.gene50024 | PPI |
| MS.gene029222 | MS.gene57836 | PPI |
| MS.gene05210 | MS.gene029222 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029222.t1 | MTR_1g114250 | 99.483 | 773 | 4 | 0 | 1 | 773 | 1 | 773 | 0.0 | 1571 |
| MS.gene029222.t1 | MTR_6g077750 | 52.517 | 735 | 291 | 9 | 23 | 745 | 38 | 726 | 0.0 | 726 |
| MS.gene029222.t1 | MTR_6g077750 | 50.079 | 633 | 263 | 7 | 23 | 648 | 38 | 624 | 0.0 | 585 |
| MS.gene029222.t1 | MTR_2g030440 | 49.650 | 143 | 24 | 4 | 416 | 558 | 2 | 96 | 2.02e-26 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029222.t1 | AT5G19690 | 86.346 | 769 | 99 | 3 | 8 | 773 | 13 | 778 | 0.0 | 1342 |
| MS.gene029222.t1 | AT5G19690 | 86.739 | 739 | 92 | 3 | 38 | 773 | 2 | 737 | 0.0 | 1296 |
| MS.gene029222.t1 | AT1G34130 | 52.049 | 732 | 303 | 7 | 22 | 746 | 45 | 735 | 0.0 | 731 |
Find 180 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTGGCCTTCTTACTTTA+TGG | 0.093285 | 1.3:+77399137 | MS.gene029222:CDS |
| TGAGCACTTTGCATCATTTC+TGG | 0.185711 | 1.3:+77397467 | MS.gene029222:CDS |
| CACTTTCTATCTCTATATTA+AGG | 0.191809 | 1.3:+77396359 | MS.gene029222:CDS |
| AACGGAAAACTAAACTAAAA+AGG | 0.216627 | 1.3:-77402842 | None:intergenic |
| TTTCCCCGAATCCTGTTCTT+TGG | 0.253211 | 1.3:-77402651 | None:intergenic |
| TGTATAAACTTTCATATTAC+AGG | 0.253725 | 1.3:+77401939 | MS.gene029222:CDS |
| CTTGACAGCAGCAGTTCTTC+TGG | 0.274216 | 1.3:+77395955 | MS.gene029222:CDS |
| ACAAATTAAGAAAAGGCTTT+TGG | 0.276228 | 1.3:+77399834 | MS.gene029222:CDS |
| AAATATGTTCTTGTCGTCTT+TGG | 0.281791 | 1.3:+77401544 | MS.gene029222:CDS |
| TCCTATAGGTTCACAGTGTA+TGG | 0.283509 | 1.3:+77400298 | MS.gene029222:intron |
| TATTGTCTTACTTGTGTTGC+TGG | 0.288557 | 1.3:+77399885 | MS.gene029222:CDS |
| CCAGCGGCTTGCATCTTGTC+TGG | 0.292555 | 1.3:+77399488 | MS.gene029222:CDS |
| GCTCTTGTATACTATATTAA+AGG | 0.296672 | 1.3:+77398244 | MS.gene029222:CDS |
| CCAATATCGAATTGATAATA+TGG | 0.301616 | 1.3:+77401889 | MS.gene029222:CDS |
| GAACAAATGCTTACATTAAC+AGG | 0.304740 | 1.3:-77399587 | None:intergenic |
| TTTACCAATTCAGGTTGTAT+TGG | 0.320605 | 1.3:+77397389 | MS.gene029222:intron |
| CCATATTATCAATTCGATAT+TGG | 0.321395 | 1.3:-77401889 | None:intergenic |
| AGAATGGGATATATGACTTT+TGG | 0.322168 | 1.3:+77395382 | MS.gene029222:CDS |
| CTTCCACTCCATCCCATTGT+TGG | 0.323390 | 1.3:-77398474 | None:intergenic |
| TTCCACTCCATCCCATTGTT+GGG | 0.336031 | 1.3:-77398473 | None:intergenic |
| TGTATGACTTACCAAGTAAT+CGG | 0.341627 | 1.3:-77401730 | None:intergenic |
| TTACCAATTCAGGTTGTATT+GGG | 0.344911 | 1.3:+77397390 | MS.gene029222:intron |
| TATTCTCAGCCTTTGCTTCA+TGG | 0.346243 | 1.3:+77395805 | MS.gene029222:CDS |
| TTCTCCAGAAAAGGCTGCTT+GGG | 0.355080 | 1.3:+77401498 | MS.gene029222:CDS |
| TTGTAGGAGGTTAAGGGTGC+TGG | 0.359087 | 1.3:+77395926 | MS.gene029222:intron |
| GTAGTACATGCATTGGAATA+AGG | 0.361059 | 1.3:-77396934 | None:intergenic |
| ACCTCCAAAGAACAGGATTC+GGG | 0.363455 | 1.3:+77402647 | MS.gene029222:CDS |
| CATAAAGGAACCCGATTACT+TGG | 0.377882 | 1.3:+77401719 | MS.gene029222:CDS |
| GCTGCATTGGTACCTGTTGT+TGG | 0.386627 | 1.3:+77397423 | MS.gene029222:CDS |
| CCCCGAATCCTGTTCTTTGG+AGG | 0.389569 | 1.3:-77402648 | None:intergenic |
| ATGGTTATTATTAGGATTGG+TGG | 0.397944 | 1.3:+77401629 | MS.gene029222:intron |
| TGTGATGTTAGAACGATAGA+AGG | 0.398580 | 1.3:-77400345 | None:intergenic |
| AACCTCCAAAGAACAGGATT+CGG | 0.404800 | 1.3:+77402646 | MS.gene029222:CDS |
| TAAAGTAAGAAGGCCAAGTT+GGG | 0.408489 | 1.3:-77399134 | None:intergenic |
| GAGGTTAAGGGTGCTGGAGC+TGG | 0.411374 | 1.3:+77395932 | MS.gene029222:CDS |
| TATCCCCTTGGTCGTGTAAT+CGG | 0.411602 | 1.3:+77395546 | MS.gene029222:CDS |
| GGTTAGCCATTGCAGTTGTT+TGG | 0.415001 | 1.3:-77401408 | None:intergenic |
| GTCATGTAGACGCTGAATAC+AGG | 0.417327 | 1.3:+77396750 | MS.gene029222:intron |
| AGAGTGAGGCGGACGGAGAT+TGG | 0.418608 | 1.3:+77402078 | MS.gene029222:CDS |
| ACCTCTCTCCGCCACGCATT+CGG | 0.419044 | 1.3:+77394498 | MS.gene029222:CDS |
| GTACTACTGTGCATAGTAAC+TGG | 0.420792 | 1.3:+77396950 | MS.gene029222:CDS |
| TATGTTCTTGTCGTCTTTGG+AGG | 0.426776 | 1.3:+77401547 | MS.gene029222:CDS |
| ATTGCTTTGCTACAGGTTTG+TGG | 0.427254 | 1.3:+77402032 | MS.gene029222:intron |
| GTGGCATCTTGGTGGGATTA+CGG | 0.428437 | 1.3:+77401382 | MS.gene029222:CDS |
| ATTCTCAGCCTTTGCTTCAT+GGG | 0.429291 | 1.3:+77395806 | MS.gene029222:CDS |
| CAGCGGCTTGCATCTTGTCT+GGG | 0.432117 | 1.3:+77399489 | MS.gene029222:CDS |
| AGCAATATGAGTGTTATTCC+AGG | 0.433272 | 1.3:-77401455 | None:intergenic |
| CTATGGATGGTTCGTATTGG+AGG | 0.434774 | 1.3:+77401681 | MS.gene029222:CDS |
| TGGTTATTATTAGGATTGGT+GGG | 0.435208 | 1.3:+77401630 | MS.gene029222:intron |
| GAGTGAGGCGGACGGAGATT+GGG | 0.435397 | 1.3:+77402079 | MS.gene029222:CDS |
| CTTCTCCAGAAAAGGCTGCT+TGG | 0.438560 | 1.3:+77401497 | MS.gene029222:CDS |
| ATGAGGCAGTTAAGCATTGT+TGG | 0.439857 | 1.3:-77401917 | None:intergenic |
| GAAAAGCAAGAAGAAGGAAA+AGG | 0.442161 | 1.3:+77399783 | MS.gene029222:CDS |
| CTTTATGGATATCAATGTCT+TGG | 0.445724 | 1.3:+77399152 | MS.gene029222:CDS |
| CTGGAGCAAGTACAAGCATC+AGG | 0.448117 | 1.3:-77399469 | None:intergenic |
| TTCTTAATTTGTGCCTTGCT+AGG | 0.449491 | 1.3:-77399823 | None:intergenic |
| AGGAGAATCAACTGATAGAC+TGG | 0.449725 | 1.3:-77399567 | None:intergenic |
| CTTGTAGGTGGCATCTTGGT+GGG | 0.453018 | 1.3:+77401375 | MS.gene029222:intron |
| GGGCACACTGTTGGCTGCAT+TGG | 0.454404 | 1.3:+77397410 | MS.gene029222:CDS |
| CGGCACAACACTTTCAGAAC+TGG | 0.457312 | 1.3:-77399704 | None:intergenic |
| TGCAATGTCTTCTCCAGAAA+AGG | 0.461314 | 1.3:+77401489 | MS.gene029222:CDS |
| TCTCATGCAGGTTTGCTCGT+GGG | 0.462564 | 1.3:+77396889 | MS.gene029222:intron |
| ATTTCTTGTAGGTGGCATCT+TGG | 0.462565 | 1.3:+77401371 | MS.gene029222:intron |
| GAACTTATTAATATCATCAC+TGG | 0.463456 | 1.3:-77401658 | None:intergenic |
| GAAGCAAAGGCTGAGAATAT+AGG | 0.466234 | 1.3:-77395801 | None:intergenic |
| GACTGGTTACTCACCAAGTT+CGG | 0.466297 | 1.3:-77395419 | None:intergenic |
| TTCTTCATTCTGATCTTGAT+CGG | 0.468540 | 1.3:+77394534 | MS.gene029222:CDS |
| TCTTGTAGGTGGCATCTTGG+TGG | 0.469040 | 1.3:+77401374 | MS.gene029222:intron |
| ATTGTCTTACTTGTGTTGCT+GGG | 0.472888 | 1.3:+77399886 | MS.gene029222:CDS |
| CCTGCTGTCAAGGTCAAACC+TGG | 0.473215 | 1.3:-77395582 | None:intergenic |
| AGTTGAAACCTCCAAAGAAC+AGG | 0.473884 | 1.3:+77402640 | MS.gene029222:CDS |
| GGGTGTATTCCCTCACATAA+AGG | 0.474448 | 1.3:+77401704 | MS.gene029222:CDS |
| CTCATGCAGGTTTGCTCGTG+GGG | 0.474775 | 1.3:+77396890 | MS.gene029222:intron |
| TTCCTATGGATGGTTCGTAT+TGG | 0.479665 | 1.3:+77401678 | MS.gene029222:CDS |
| TCACTAACGCTAGCAATGAT+TGG | 0.481602 | 1.3:-77399102 | None:intergenic |
| TCAGTCTTCACCGTATCATC+CGG | 0.484928 | 1.3:-77399724 | None:intergenic |
| ATGATATTAATAAGTTCCTA+TGG | 0.488616 | 1.3:+77401664 | MS.gene029222:CDS |
| TTCTCATGCAGGTTTGCTCG+TGG | 0.489608 | 1.3:+77396888 | MS.gene029222:intron |
| AACACTCATATTGCTACTGT+TGG | 0.490916 | 1.3:+77401463 | MS.gene029222:CDS |
| AAGTAAGACAATAGCAATGA+TGG | 0.492039 | 1.3:-77399875 | None:intergenic |
| GCAAGGCACAAATTAAGAAA+AGG | 0.493379 | 1.3:+77399827 | MS.gene029222:CDS |
| TATGGATGGTTCGTATTGGA+GGG | 0.494090 | 1.3:+77401682 | MS.gene029222:CDS |
| GCTGTGACACTAGTTGTGTC+TGG | 0.497013 | 1.3:+77398295 | MS.gene029222:CDS |
| TATTGTCAACAATAACAGTT+CGG | 0.497197 | 1.3:-77401429 | None:intergenic |
| CTCAAAGAAAAGCAAGAAGA+AGG | 0.497387 | 1.3:+77399777 | MS.gene029222:CDS |
| ACAGCATTAAATCCAACAAC+AGG | 0.510921 | 1.3:-77397435 | None:intergenic |
| AGCAGCAGTTCTTCTGGCTA+TGG | 0.515928 | 1.3:+77395961 | MS.gene029222:CDS |
| CCAGACAAGATGCAAGCCGC+TGG | 0.517935 | 1.3:-77399488 | None:intergenic |
| TAAAACTGAGGACACACATA+AGG | 0.518883 | 1.3:+77399747 | MS.gene029222:CDS |
| CCCCTTGGTCGTGTAATCGG+TGG | 0.519474 | 1.3:+77395549 | MS.gene029222:CDS |
| AAAGAGCTTGCATCAGATAG+AGG | 0.520232 | 1.3:-77399306 | None:intergenic |
| CACCGAGAGAGGTATGTTCA+AGG | 0.521704 | 1.3:-77395754 | None:intergenic |
| GTGACTCTGTAGTTGAAGTA+AGG | 0.522802 | 1.3:-77395168 | None:intergenic |
| GGTTGTATTGGGCACACTGT+TGG | 0.523631 | 1.3:+77397401 | MS.gene029222:intron |
| CCCTTGGTCGTGTAATCGGT+GGG | 0.527724 | 1.3:+77395550 | MS.gene029222:CDS |
| CCACAAGGTGCCTGCTGTCA+AGG | 0.529010 | 1.3:-77395592 | None:intergenic |
| ATCGGTGGGACTGTCTATCC+AGG | 0.529949 | 1.3:+77395564 | MS.gene029222:CDS |
| TTCCTTGAACATACCTCTCT+CGG | 0.530525 | 1.3:+77395752 | MS.gene029222:CDS |
| TCTGTTTCAAGGTATCCCCT+TGG | 0.530834 | 1.3:+77395534 | MS.gene029222:intron |
| CCTATAGGTTCACAGTGTAT+GGG | 0.531377 | 1.3:+77400299 | MS.gene029222:intron |
| TTGATATCCATAAAGTAAGA+AGG | 0.535263 | 1.3:-77399144 | None:intergenic |
| TATATATCTCGATCAGTGGC+AGG | 0.535279 | 1.3:+77396294 | MS.gene029222:CDS |
| GGTTATTATTAGGATTGGTG+GGG | 0.536163 | 1.3:+77401631 | MS.gene029222:intron |
| ACTGGTTCGATGACCGAACT+TGG | 0.536935 | 1.3:+77395406 | MS.gene029222:CDS |
| GTATGACTTACCAAGTAATC+GGG | 0.539012 | 1.3:-77401729 | None:intergenic |
| TATTAATAAGTTCCTATGGA+TGG | 0.540170 | 1.3:+77401668 | MS.gene029222:CDS |
| AGTTCAAAGTGGCATAAAAG+AGG | 0.544663 | 1.3:-77396776 | None:intergenic |
| GTTGCTGGGTGCTTTCTATG+TGG | 0.546621 | 1.3:+77399900 | MS.gene029222:CDS |
| TTCCAACTTCAAAAGAGGGA+TGG | 0.547855 | 1.3:+77401866 | MS.gene029222:intron |
| CTCAATAGCATACTTCTACA+TGG | 0.551555 | 1.3:+77396797 | MS.gene029222:CDS |
| ATAAAGTAAGAAGGCCAAGT+TGG | 0.552548 | 1.3:-77399135 | None:intergenic |
| GTAGCTGCAAGCCCAACAAT+GGG | 0.558984 | 1.3:+77398462 | MS.gene029222:CDS |
| AGGTGTTCACAACTCACCAT+TGG | 0.561295 | 1.3:+77402601 | MS.gene029222:intron |
| GGTAGCTGCAAGCCCAACAA+TGG | 0.561623 | 1.3:+77398461 | MS.gene029222:CDS |
| ATGCACAGTAGTACATGCAT+TGG | 0.565217 | 1.3:-77396941 | None:intergenic |
| GATAGCAGTACTTGTTGCAA+TGG | 0.565620 | 1.3:+77398440 | MS.gene029222:CDS |
| GTGATGTTAGAACGATAGAA+GGG | 0.568837 | 1.3:-77400344 | None:intergenic |
| CCAGGTTTGACCTTGACAGC+AGG | 0.568939 | 1.3:+77395582 | MS.gene029222:CDS |
| TTAATTTGTGCCTTGCTAGG+AGG | 0.569070 | 1.3:-77399820 | None:intergenic |
| AGCCCAACAATGGGATGGAG+TGG | 0.569349 | 1.3:+77398471 | MS.gene029222:CDS |
| ACCGAATGCGTGGCGGAGAG+AGG | 0.569536 | 1.3:-77394499 | None:intergenic |
| TTTCGTTCTCATCCATGTGG+TGG | 0.573532 | 1.3:+77398222 | MS.gene029222:CDS |
| CAGTTCTGAAAGTGTTGTGC+CGG | 0.574257 | 1.3:+77399705 | MS.gene029222:CDS |
| AAGTGTTGTGCCGGATGATA+CGG | 0.578550 | 1.3:+77399714 | MS.gene029222:CDS |
| GGCAACTTATCTATTAACAA+AGG | 0.580157 | 1.3:+77395827 | MS.gene029222:CDS |
| TCATGTAGACGCTGAATACA+GGG | 0.581789 | 1.3:+77396751 | MS.gene029222:intron |
| GATACTTTATATTGTTACAT+CGG | 0.583646 | 1.3:+77399332 | MS.gene029222:CDS |
| CTAACATCACATTCACATGA+TGG | 0.586009 | 1.3:+77400357 | MS.gene029222:CDS |
| TGTGGAAAAGCCTCCTAGCA+AGG | 0.587595 | 1.3:+77399810 | MS.gene029222:CDS |
| TTATTGTTGACAATAATACC+TGG | 0.589759 | 1.3:+77401437 | MS.gene029222:CDS |
| AAATGCTTACGGAGAAAAGA+CGG | 0.590130 | 1.3:-77394575 | None:intergenic |
| TGTATATCCGCACCATCCAA+TGG | 0.591677 | 1.3:-77402617 | None:intergenic |
| CTTCAACTACAGAGTCACTC+AGG | 0.593654 | 1.3:+77395173 | MS.gene029222:CDS |
| GCAGTTAAGCATTGTTGGTG+TGG | 0.594237 | 1.3:-77401912 | None:intergenic |
| CGGATACCAAACAACTGCAA+TGG | 0.596996 | 1.3:+77401402 | MS.gene029222:CDS |
| GCGGAGAGAGGTTTGAGCAT+CGG | 0.597758 | 1.3:-77394487 | None:intergenic |
| TAATCGGGTTCCTTTATGTG+AGG | 0.598243 | 1.3:-77401714 | None:intergenic |
| CTGCAAGCCCAACAATGGGA+TGG | 0.598334 | 1.3:+77398466 | MS.gene029222:CDS |
| CAAACAGTTTCCACCGAGAG+AGG | 0.600577 | 1.3:-77395765 | None:intergenic |
| GGAGAAAAGACGGATCGAGA+AGG | 0.603010 | 1.3:-77394565 | None:intergenic |
| AATCGGGTTCCTTTATGTGA+GGG | 0.603250 | 1.3:-77401713 | None:intergenic |
| GAACTCACGATAATGCCAGC+TGG | 0.606321 | 1.3:-77399186 | None:intergenic |
| GAGAGAGGTTTGAGCATCGG+TGG | 0.612144 | 1.3:-77394484 | None:intergenic |
| ATAAGTTGCCCATGAAGCAA+AGG | 0.612883 | 1.3:-77395814 | None:intergenic |
| ATGCAGGTTTGCTCGTGGGG+AGG | 0.613474 | 1.3:+77396893 | MS.gene029222:intron |
| GAAGAAGGAAAAGGAACCTG+TGG | 0.613616 | 1.3:+77399792 | MS.gene029222:CDS |
| AAGAACATATTTGACATCCA+AGG | 0.613668 | 1.3:-77401533 | None:intergenic |
| CAACTCACCATTGGATGGTG+CGG | 0.617809 | 1.3:+77402610 | MS.gene029222:CDS |
| CCTTGACAGCAGGCACCTTG+TGG | 0.618596 | 1.3:+77395592 | MS.gene029222:CDS |
| AACTTATTAATATCATCACT+GGG | 0.619603 | 1.3:-77401657 | None:intergenic |
| TGGATGGTTCGTATTGGAGG+GGG | 0.620883 | 1.3:+77401684 | MS.gene029222:CDS |
| TACAGGTTTGTGGAGACAGA+CGG | 0.620893 | 1.3:+77402042 | MS.gene029222:intron |
| GTCATATATATCTCGATCAG+TGG | 0.624270 | 1.3:+77396290 | MS.gene029222:CDS |
| ACTGATCGAGATATATATGA+CGG | 0.627086 | 1.3:-77396288 | None:intergenic |
| CTCCAATACGAACCATCCAT+AGG | 0.628467 | 1.3:-77401680 | None:intergenic |
| CTGATCGAGATATATATGAC+GGG | 0.631540 | 1.3:-77396287 | None:intergenic |
| GTTCAAAGTGGCATAAAAGA+GGG | 0.633018 | 1.3:-77396775 | None:intergenic |
| AATATGAAAGTTTATACATG+AGG | 0.635580 | 1.3:-77401934 | None:intergenic |
| TCCCACCGATTACACGACCA+AGG | 0.645079 | 1.3:-77395551 | None:intergenic |
| ATGGATGGTTCGTATTGGAG+GGG | 0.645194 | 1.3:+77401683 | MS.gene029222:CDS |
| TGACAGCAGGCACCTTGTGG+TGG | 0.645256 | 1.3:+77395595 | MS.gene029222:CDS |
| GTGACACTAGTTGTGTCTGG+TGG | 0.649444 | 1.3:+77398298 | MS.gene029222:CDS |
| GTTCACAACTCACCATTGGA+TGG | 0.649815 | 1.3:+77402605 | MS.gene029222:CDS |
| CCCACCGATTACACGACCAA+GGG | 0.652187 | 1.3:-77395550 | None:intergenic |
| TATAAAGTCGAGAAGAATAG+CGG | 0.656209 | 1.3:-77396973 | None:intergenic |
| GATGCTTGTACTTGCTCCAG+CGG | 0.657300 | 1.3:+77399472 | MS.gene029222:CDS |
| CGAGAACGTTACCGAATGCG+TGG | 0.658465 | 1.3:-77394509 | None:intergenic |
| AGTATACAAGAGCCACCACA+TGG | 0.669038 | 1.3:-77398234 | None:intergenic |
| GGAGAATCAACTGATAGACT+GGG | 0.675821 | 1.3:-77399566 | None:intergenic |
| CCTCCAAAGAACAGGATTCG+GGG | 0.676717 | 1.3:+77402648 | MS.gene029222:CDS |
| TGATGTTAGAACGATAGAAG+GGG | 0.680784 | 1.3:-77400343 | None:intergenic |
| AAATACCACCTACCACCACA+AGG | 0.682831 | 1.3:-77395607 | None:intergenic |
| CTTGAACATACCTCTCTCGG+TGG | 0.689126 | 1.3:+77395755 | MS.gene029222:CDS |
| GTATGCTATTGAGTTCAAAG+TGG | 0.693577 | 1.3:-77396787 | None:intergenic |
| CCACCGATTACACGACCAAG+GGG | 0.697270 | 1.3:-77395549 | None:intergenic |
| AAAGTAAGAAGGCCAAGTTG+GGG | 0.698949 | 1.3:-77399133 | None:intergenic |
| AAGTAAGAAGGCCAAGTTGG+GGG | 0.702179 | 1.3:-77399132 | None:intergenic |
| GAACGTTACCGAATGCGTGG+CGG | 0.702556 | 1.3:-77394506 | None:intergenic |
| GCAATGATGGATGTTTCCAG+AGG | 0.714647 | 1.3:-77399862 | None:intergenic |
| GGTGAAGACTGATAAAACTG+AGG | 0.726733 | 1.3:+77399735 | MS.gene029222:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 77394477 | 77402850 | 77394477 | ID=MS.gene029222 |
| chr1.3 | mRNA | 77394477 | 77402850 | 77394477 | ID=MS.gene029222.t1;Parent=MS.gene029222 |
| chr1.3 | exon | 77394477 | 77394587 | 77394477 | ID=MS.gene029222.t1.exon1;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77394477 | 77394587 | 77394477 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77395132 | 77395194 | 77395132 | ID=MS.gene029222.t1.exon2;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77395132 | 77395194 | 77395132 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77395372 | 77395427 | 77395372 | ID=MS.gene029222.t1.exon3;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77395372 | 77395427 | 77395372 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77395545 | 77395616 | 77395545 | ID=MS.gene029222.t1.exon4;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77395545 | 77395616 | 77395545 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77395743 | 77395848 | 77395743 | ID=MS.gene029222.t1.exon5;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77395743 | 77395848 | 77395743 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77395932 | 77395982 | 77395932 | ID=MS.gene029222.t1.exon6;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77395932 | 77395982 | 77395932 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77396285 | 77396380 | 77396285 | ID=MS.gene029222.t1.exon7;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77396285 | 77396380 | 77396285 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77396759 | 77396818 | 77396759 | ID=MS.gene029222.t1.exon8;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77396759 | 77396818 | 77396759 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77396899 | 77397012 | 77396899 | ID=MS.gene029222.t1.exon9;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77396899 | 77397012 | 77396899 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77397402 | 77397488 | 77397402 | ID=MS.gene029222.t1.exon10;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77397402 | 77397488 | 77397402 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77398220 | 77398323 | 77398220 | ID=MS.gene029222.t1.exon11;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77398220 | 77398323 | 77398220 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77398422 | 77398517 | 77398422 | ID=MS.gene029222.t1.exon12;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77398422 | 77398517 | 77398422 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77399080 | 77399200 | 77399080 | ID=MS.gene029222.t1.exon13;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77399080 | 77399200 | 77399080 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77399294 | 77399374 | 77399294 | ID=MS.gene029222.t1.exon14;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77399294 | 77399374 | 77399294 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77399464 | 77399595 | 77399464 | ID=MS.gene029222.t1.exon15;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77399464 | 77399595 | 77399464 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77399694 | 77399921 | 77399694 | ID=MS.gene029222.t1.exon16;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77399694 | 77399921 | 77399694 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77400306 | 77400449 | 77400306 | ID=MS.gene029222.t1.exon17;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77400306 | 77400449 | 77400306 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77401382 | 77401568 | 77401382 | ID=MS.gene029222.t1.exon18;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77401382 | 77401568 | 77401382 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77401643 | 77401740 | 77401643 | ID=MS.gene029222.t1.exon19;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77401643 | 77401740 | 77401643 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77401881 | 77401960 | 77401881 | ID=MS.gene029222.t1.exon20;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77401881 | 77401960 | 77401881 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77402047 | 77402134 | 77402047 | ID=MS.gene029222.t1.exon21;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77402047 | 77402134 | 77402047 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77402603 | 77402692 | 77402603 | ID=MS.gene029222.t1.exon22;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77402603 | 77402692 | 77402603 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| chr1.3 | exon | 77402794 | 77402850 | 77402794 | ID=MS.gene029222.t1.exon23;Parent=MS.gene029222.t1 |
| chr1.3 | CDS | 77402794 | 77402850 | 77402794 | ID=cds.MS.gene029222.t1;Parent=MS.gene029222.t1 |
| Gene Sequence |
| Protein sequence |
