Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50024.t1 | XP_003620143.1 | 96.1 | 727 | 14 | 1 | 1 | 713 | 1 | 727 | 0.00E+00 | 1371.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50024.t1 | Q9FX21 | 84.5 | 721 | 95 | 2 | 9 | 712 | 14 | 734 | 0.0e+00 | 1213.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50024.t1 | G7KKA7 | 96.1 | 727 | 14 | 1 | 1 | 713 | 1 | 727 | 0.0e+00 | 1371.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050894 | MS.gene50024 | 0.824064 | 9.88E-54 | -1.69E-46 |
MS.gene05210 | MS.gene50024 | 0.897839 | 9.52E-77 | -1.69E-46 |
MS.gene060398 | MS.gene50024 | 0.802102 | 6.58E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene005960 | MS.gene50024 | PPI |
MS.gene93138 | MS.gene50024 | PPI |
MS.gene057990 | MS.gene50024 | PPI |
MS.gene50925 | MS.gene50024 | PPI |
MS.gene50921 | MS.gene50024 | PPI |
MS.gene50024 | MS.gene54807 | PPI |
MS.gene037354 | MS.gene50024 | PPI |
MS.gene34049 | MS.gene50024 | PPI |
MS.gene069988 | MS.gene50024 | PPI |
MS.gene057988 | MS.gene50024 | PPI |
MS.gene014310 | MS.gene50024 | PPI |
MS.gene029222 | MS.gene50024 | PPI |
MS.gene056676 | MS.gene50024 | PPI |
MS.gene50024 | MS.gene45709 | PPI |
MS.gene014312 | MS.gene50024 | PPI |
MS.gene50024 | MS.gene039901 | PPI |
MS.gene50024 | MS.gene064868 | PPI |
MS.gene66827 | MS.gene50024 | PPI |
MS.gene039903 | MS.gene50024 | PPI |
MS.gene003786 | MS.gene50024 | PPI |
MS.gene001011 | MS.gene50024 | PPI |
MS.gene50024 | MS.gene50052 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50024.t1 | MTR_6g077750 | 97.249 | 727 | 6 | 1 | 1 | 713 | 1 | 727 | 0.0 | 1442 |
MS.gene50024.t1 | MTR_6g077750 | 96.795 | 624 | 6 | 1 | 1 | 610 | 1 | 624 | 0.0 | 1221 |
MS.gene50024.t1 | MTR_1g114250 | 50.611 | 737 | 288 | 10 | 38 | 712 | 23 | 745 | 0.0 | 712 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50024.t1 | AT1G34130 | 85.160 | 721 | 90 | 2 | 9 | 712 | 14 | 734 | 0.0 | 1239 |
MS.gene50024.t1 | AT5G19690 | 48.883 | 761 | 315 | 9 | 14 | 712 | 4 | 752 | 0.0 | 682 |
MS.gene50024.t1 | AT5G19690 | 49.446 | 722 | 291 | 9 | 53 | 712 | 2 | 711 | 0.0 | 664 |
Find 176 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTTCTTCGGTAAAGAAATA+TGG | 0.193678 | 6.2:-77324297 | MS.gene50024:CDS |
GTATTGGTGTTGTTGGTTAC+TGG | 0.231153 | 6.2:-77324025 | MS.gene50024:CDS |
TAATCTGGTTCCTTTATTAC+AGG | 0.239527 | 6.2:+77320585 | None:intergenic |
AGCTGTCTTATTATCGGTTT+GGG | 0.248895 | 6.2:-77320123 | MS.gene50024:CDS |
ATAAGACAGTTCAACATCTT+TGG | 0.258164 | 6.2:+77320522 | None:intergenic |
ACATCATAGCACCGTTCTTT+TGG | 0.260731 | 6.2:+77321463 | None:intergenic |
GTCGTGTTTGGTGGTGTTAC+TGG | 0.264869 | 6.2:-77321081 | MS.gene50024:CDS |
GTTATGTCATGGTGGGATTA+TGG | 0.273069 | 6.2:-77321255 | MS.gene50024:CDS |
CGCGCTAGAGGTGTTGAAAT+TGG | 0.280004 | 6.2:-77319388 | MS.gene50024:CDS |
AACACGGTTTCTCCGAGTTT+TGG | 0.286522 | 6.2:-77324507 | MS.gene50024:CDS |
TGGTGAACATATGGCTTCTA+TGG | 0.287456 | 6.2:-77323900 | MS.gene50024:CDS |
AGAATTTGACTCGGGTTGTT+AGG | 0.293673 | 6.2:-77322017 | MS.gene50024:CDS |
GAACTGCAAATCTAAGAAAA+TGG | 0.295783 | 6.2:+77324383 | None:intergenic |
GGTAAAGAAATATGGGATTC+AGG | 0.304894 | 6.2:-77324289 | MS.gene50024:CDS |
AGGTGTTGAAATTGGAAATA+AGG | 0.316515 | 6.2:-77319380 | MS.gene50024:CDS |
GGAAAAGGAACAGCAATATA+TGG | 0.333152 | 6.2:+77322205 | None:intergenic |
GGTACAAGCTGTCTTATTAT+CGG | 0.340894 | 6.2:-77320129 | MS.gene50024:CDS |
TTATAATTGTATGTATGTTT+TGG | 0.345888 | 6.2:-77323975 | MS.gene50024:CDS |
TGGGCATTGGCGTCGGCGTT+TGG | 0.352651 | 6.2:-77324112 | MS.gene50024:CDS |
GAGGAGGAGTTCTTGTTGTT+TGG | 0.355288 | 6.2:+77324660 | None:intergenic |
TGCTTCAAAAGGCTCTTCTA+AGG | 0.359146 | 6.2:-77321950 | MS.gene50024:intron |
AAGCTGTCTTATTATCGGTT+TGG | 0.359634 | 6.2:-77320124 | MS.gene50024:CDS |
TGAAATATGGATCGAATTCA+TGG | 0.363606 | 6.2:+77324557 | None:intergenic |
TCAGAGACAGAAGCAATAAT+TGG | 0.363976 | 6.2:+77322267 | None:intergenic |
GAAGGGAATTGAGGAGATCT+TGG | 0.364364 | 6.2:+77324704 | None:intergenic |
TGCTATGTGTGTATTGTTCC+AGG | 0.366625 | 6.2:+77321182 | None:intergenic |
CAAACTGTACAGAGTGGTTC+TGG | 0.367344 | 6.2:-77321985 | MS.gene50024:CDS |
TGCATTGATCGCGATTTGTC+CGG | 0.375691 | 6.2:-77324248 | MS.gene50024:CDS |
GCTATGCAGATTCGGTTTGT+TGG | 0.376291 | 6.2:-77323941 | MS.gene50024:CDS |
GACTATGTGTTAGTCGTGTT+TGG | 0.381068 | 6.2:-77321093 | MS.gene50024:CDS |
CTATGCAGATTCGGTTTGTT+GGG | 0.381588 | 6.2:-77323940 | MS.gene50024:CDS |
GGAGAATATCGTGTAGATAA+AGG | 0.383279 | 6.2:-77320552 | MS.gene50024:CDS |
TCTCCATTGACAAGGTAATC+TGG | 0.383736 | 6.2:+77320570 | None:intergenic |
GGGGAGCTGACAACAGAATA+TGG | 0.387972 | 6.2:-77320103 | MS.gene50024:CDS |
TTTCTTCGGTAAAGAAATAT+GGG | 0.389942 | 6.2:-77324296 | MS.gene50024:CDS |
CAGAACCACTCTGTACAGTT+TGG | 0.397760 | 6.2:+77321986 | None:intergenic |
AGGCATTTACTACTCAGAAT+TGG | 0.402924 | 6.2:-77319333 | MS.gene50024:CDS |
TATTGGTGTTGTTGGTTACT+GGG | 0.405067 | 6.2:-77324024 | MS.gene50024:CDS |
ATTGGTTCGATTCCGATTCA+TGG | 0.405627 | 6.2:-77324483 | MS.gene50024:CDS |
GCTTTATGTATTGGTGTTGT+TGG | 0.405793 | 6.2:-77324032 | MS.gene50024:CDS |
GGGTTAATGCTCACTGCTGC+TGG | 0.410660 | 6.2:-77324421 | MS.gene50024:CDS |
TGGAAATAAGGACATAAAGT+TGG | 0.417826 | 6.2:-77319368 | MS.gene50024:CDS |
GAAATATGGGATTCAGGGGC+TGG | 0.418242 | 6.2:-77324283 | MS.gene50024:CDS |
TGTTGCTTGCTATGCAGATT+CGG | 0.420054 | 6.2:-77323949 | MS.gene50024:CDS |
TGTTCAATCTGGTGAACATA+TGG | 0.422142 | 6.2:-77323909 | MS.gene50024:CDS |
ATTATCGTGAGGCTTACTTT+TGG | 0.425418 | 6.2:-77321308 | MS.gene50024:CDS |
GAATTTGACTCGGGTTGTTA+GGG | 0.426599 | 6.2:-77322016 | MS.gene50024:CDS |
GTGGTGCGGTAGTTGAAATA+TGG | 0.430387 | 6.2:+77324544 | None:intergenic |
GGTGTTGGTGCCGTTGCCTT+GGG | 0.430966 | 6.2:-77322375 | MS.gene50024:CDS |
GTTTGTGAAAGCCGTGAATA+CGG | 0.431019 | 6.2:-77324146 | MS.gene50024:CDS |
CTCAATTGTCTTGGCTGCAA+GGG | 0.435929 | 6.2:-77321361 | MS.gene50024:CDS |
GATATGCTATTCACTGTACT+TGG | 0.436601 | 6.2:-77321410 | MS.gene50024:CDS |
TGGTGTTGGTGCCGTTGCCT+TGG | 0.436713 | 6.2:-77322376 | MS.gene50024:CDS |
AATAGAGGCCAGCAGGGAAA+AGG | 0.444820 | 6.2:+77322190 | None:intergenic |
CCTCAATTGTCTTGGCTGCA+AGG | 0.452743 | 6.2:-77321362 | MS.gene50024:CDS |
CAAAGATGACCCTCTGGCCG+TGG | 0.453430 | 6.2:+77321334 | None:intergenic |
TTTGGTGCCGCTTTATGTAT+TGG | 0.453549 | 6.2:-77324041 | MS.gene50024:CDS |
GGGGAGTTTGTCGTGGGCAT+TGG | 0.454776 | 6.2:-77324125 | MS.gene50024:CDS |
CATGACATAACCTTGGCATC+TGG | 0.455319 | 6.2:+77321267 | None:intergenic |
CTCATCTCCCTCAATTGTCT+TGG | 0.455502 | 6.2:-77321370 | MS.gene50024:CDS |
TTTGTGAAAGCCGTGAATAC+GGG | 0.457613 | 6.2:-77324145 | MS.gene50024:CDS |
GGGTTTCAACATGTTCAATC+TGG | 0.457870 | 6.2:-77323920 | MS.gene50024:CDS |
TTGGGAGTAGGCATGGCATC+TGG | 0.460733 | 6.2:-77322357 | MS.gene50024:CDS |
CGACAAACTCCCCGTATTCA+CGG | 0.461362 | 6.2:+77324135 | None:intergenic |
GGACATAAAGTTGGAGTACC+TGG | 0.469382 | 6.2:-77319359 | MS.gene50024:CDS |
ACGATTGTAGCGTATTTCTT+CGG | 0.469601 | 6.2:-77324310 | MS.gene50024:CDS |
GAATAAAACCTTCCGGTCCA+TGG | 0.472101 | 6.2:+77322324 | None:intergenic |
CAAGGGGTGCCCACGGCCAG+AGG | 0.473774 | 6.2:-77321344 | MS.gene50024:CDS |
AAAGGAACTGGTGCTTCAAA+AGG | 0.479203 | 6.2:-77321961 | MS.gene50024:CDS |
AGCAGCAGTGAGCATTAACC+CGG | 0.485133 | 6.2:+77324423 | None:intergenic |
ACAATCTTCATAGTTATGTA+TGG | 0.489530 | 6.2:-77322141 | MS.gene50024:CDS |
GTACAGAGTGGTTCTGGTAA+AGG | 0.489773 | 6.2:-77321979 | MS.gene50024:CDS |
GTAAAGAAATATGGGATTCA+GGG | 0.489884 | 6.2:-77324288 | MS.gene50024:CDS |
AGTGGTTCTGGTAAAGGAAC+TGG | 0.493016 | 6.2:-77321973 | MS.gene50024:CDS |
TTTCTATGGATGGTGAGAAT+TGG | 0.498736 | 6.2:-77320621 | MS.gene50024:CDS |
GAACCAGATTACCTTGTCAA+TGG | 0.500749 | 6.2:-77320573 | MS.gene50024:CDS |
TTAAACCTAGGGTTGTGATT+CGG | 0.503699 | 6.2:+77324638 | None:intergenic |
AAATATGGGATTCAGGGGCT+GGG | 0.507059 | 6.2:-77324282 | MS.gene50024:CDS |
AGATCTTGGATTGTTGATGA+TGG | 0.507836 | 6.2:+77324718 | None:intergenic |
TTTGTCGTGGGCATTGGCGT+CGG | 0.507886 | 6.2:-77324119 | MS.gene50024:CDS |
CTATGGATGGTGAGAATTGG+TGG | 0.510223 | 6.2:-77320618 | MS.gene50024:CDS |
TGGATCGAATTCATGGATCA+TGG | 0.511512 | 6.2:+77324564 | None:intergenic |
GGTGCCGTTGCCTTGGGAGT+AGG | 0.512371 | 6.2:-77322369 | MS.gene50024:CDS |
GCATTGATCGCGATTTGTCC+GGG | 0.515574 | 6.2:-77324247 | MS.gene50024:intron |
ACAGAATATGGCAAACCACC+TGG | 0.518951 | 6.2:-77320091 | MS.gene50024:CDS |
TGGTTATCAAATCACTGCCA+TGG | 0.520717 | 6.2:-77321235 | MS.gene50024:CDS |
ATATGATCCTTAGCATATGT+TGG | 0.521428 | 6.2:+77322291 | None:intergenic |
CTTGCAGCCAAGACAATTGA+GGG | 0.524883 | 6.2:+77321363 | None:intergenic |
GAGTAGTAAATGCCTCCTCC+AGG | 0.526114 | 6.2:+77319341 | None:intergenic |
CGTTGCCTTGGGAGTAGGCA+TGG | 0.527437 | 6.2:-77322364 | MS.gene50024:CDS |
CCTTGCAGCCAAGACAATTG+AGG | 0.529935 | 6.2:+77321362 | None:intergenic |
CTGAGCATCAGCCTACTGCT+TGG | 0.530035 | 6.2:-77322248 | MS.gene50024:CDS |
TTTGTCTAGATTTCTATGGA+TGG | 0.533187 | 6.2:-77320631 | MS.gene50024:intron |
CTACTGTGAAGAATTTGACT+CGG | 0.534921 | 6.2:-77322026 | MS.gene50024:CDS |
GGCACCAACACCAACTGCAC+TGG | 0.538667 | 6.2:+77322386 | None:intergenic |
GCTTGATCCAACATATGCTA+AGG | 0.540492 | 6.2:-77322298 | MS.gene50024:CDS |
ACCGAGTGGATACCATGAAT+CGG | 0.540863 | 6.2:+77324471 | None:intergenic |
GATTGGGTAAAGCATTTACT+CGG | 0.544089 | 6.2:-77322450 | MS.gene50024:CDS |
TGAATACGGGGAGTTTGTCG+TGG | 0.544204 | 6.2:-77324132 | MS.gene50024:CDS |
TTGGCTGCAAGGGGTGCCCA+CGG | 0.546061 | 6.2:-77321351 | MS.gene50024:CDS |
GCGTGCAATGTCATCTTATG+AGG | 0.548763 | 6.2:-77321151 | MS.gene50024:CDS |
CGAGGATGTAGATTAAACCT+AGG | 0.554154 | 6.2:+77324626 | None:intergenic |
GACATAACCTTGGCATCTGG+TGG | 0.555183 | 6.2:+77321270 | None:intergenic |
AATACACACATAGCAACTGT+TGG | 0.557921 | 6.2:-77321174 | MS.gene50024:CDS |
GCACTAATGAGGCATACAGC+AGG | 0.559391 | 6.2:+77322063 | None:intergenic |
AAGCAAAGAATAAAACCTTC+CGG | 0.561162 | 6.2:+77322317 | None:intergenic |
GGTTATCAAATCACTGCCAT+GGG | 0.562186 | 6.2:-77321234 | MS.gene50024:CDS |
TCAATTGTCTTGGCTGCAAG+GGG | 0.563819 | 6.2:-77321360 | MS.gene50024:CDS |
AATCGTCAAAGATGACCCTC+TGG | 0.564738 | 6.2:+77321328 | None:intergenic |
CATGCCTACTCCCAAGGCAA+CGG | 0.564768 | 6.2:+77322365 | None:intergenic |
AACAACACCAATACATAAAG+CGG | 0.565056 | 6.2:+77324034 | None:intergenic |
CACTAATGAGGCATACAGCA+GGG | 0.568869 | 6.2:+77322064 | None:intergenic |
AATGTCATCTTATGAGGATG+AGG | 0.572863 | 6.2:-77321145 | MS.gene50024:CDS |
ATACACACATAGCAACTGTT+GGG | 0.577937 | 6.2:-77321173 | MS.gene50024:CDS |
CTAGGGTTGTGATTCGGAGG+AGG | 0.579023 | 6.2:+77324644 | None:intergenic |
TATATGGAAATCAAACATGA+AGG | 0.579181 | 6.2:+77322221 | None:intergenic |
CTCCTCCGAATCACAACCCT+AGG | 0.582391 | 6.2:-77324643 | MS.gene50024:CDS |
ATCACTGTAACCAGTGCAGT+TGG | 0.585794 | 6.2:-77322396 | MS.gene50024:CDS |
GTAACCAGTGCAGTTGGTGT+TGG | 0.586031 | 6.2:-77322390 | MS.gene50024:CDS |
TTCAGGGGCTGGGATTGTCG+CGG | 0.588842 | 6.2:-77324272 | MS.gene50024:CDS |
TATATGGTTTCCGCGTGGGG+TGG | 0.590584 | 6.2:-77324082 | MS.gene50024:CDS |
ATCCCACCATGACATAACCT+TGG | 0.591445 | 6.2:+77321260 | None:intergenic |
TATGTGTTAGTCGTGTTTGG+TGG | 0.595667 | 6.2:-77321090 | MS.gene50024:CDS |
TTACTTATTAATATCGTCAG+AGG | 0.596438 | 6.2:+77321053 | None:intergenic |
TACTGTGAAGAATTTGACTC+GGG | 0.596916 | 6.2:-77322025 | MS.gene50024:CDS |
AAAGTTGGAGTACCTGGAGG+AGG | 0.598910 | 6.2:-77319353 | MS.gene50024:CDS |
CATCTTTGACGATTATCGTG+AGG | 0.598920 | 6.2:-77321319 | MS.gene50024:CDS |
ACTCTTTACCTCACAGAACA+CGG | 0.599049 | 6.2:-77324523 | MS.gene50024:CDS |
TGCCAAGGTTATGTCATGGT+GGG | 0.600958 | 6.2:-77321262 | MS.gene50024:CDS |
AACCTAGGGTTGTGATTCGG+AGG | 0.602304 | 6.2:+77324641 | None:intergenic |
ATCGAACCAATTCCAAAACT+CGG | 0.603155 | 6.2:+77324495 | None:intergenic |
CACGATATTCTCCATTGACA+AGG | 0.603724 | 6.2:+77320562 | None:intergenic |
AATAACTGTTCTGTTTCCCA+TGG | 0.605412 | 6.2:+77321218 | None:intergenic |
ATACCGCAATAGCACTAATG+AGG | 0.605771 | 6.2:+77322052 | None:intergenic |
GACAGGTATGATCGCGCTAG+AGG | 0.607213 | 6.2:-77319400 | MS.gene50024:intron |
ATATGCTATTCACTGTACTT+GGG | 0.608269 | 6.2:-77321409 | MS.gene50024:CDS |
AAAGATGACCCTCTGGCCGT+GGG | 0.608676 | 6.2:+77321335 | None:intergenic |
AAGGGGTGCCCACGGCCAGA+GGG | 0.608944 | 6.2:-77321343 | MS.gene50024:CDS |
TATCCACTCGGTAGAATCGT+TGG | 0.612259 | 6.2:-77324460 | MS.gene50024:CDS |
GAGGATGTAGATTAAACCTA+GGG | 0.612813 | 6.2:+77324627 | None:intergenic |
TTACTGGGAGATATTCATTG+AGG | 0.613059 | 6.2:-77324009 | MS.gene50024:CDS |
GGTGAACATATGGCTTCTAT+GGG | 0.613369 | 6.2:-77323899 | MS.gene50024:CDS |
TCCCAGCCTTTCCAAAAGAA+CGG | 0.613563 | 6.2:-77321474 | MS.gene50024:CDS |
ACATATCACCATGGACCGGA+AGG | 0.613721 | 6.2:-77322332 | MS.gene50024:CDS |
ATACATAACTATGAAGATTG+TGG | 0.615117 | 6.2:+77322143 | None:intergenic |
GAACACTCCACCAGATGCCA+AGG | 0.615549 | 6.2:-77321277 | MS.gene50024:CDS |
AGATGCCATGCCTACTCCCA+AGG | 0.616613 | 6.2:+77322359 | None:intergenic |
GTTGGTGGTACACTCTACCC+CGG | 0.619052 | 6.2:-77324442 | MS.gene50024:CDS |
CAGAATATGGCAAACCACCT+GGG | 0.619228 | 6.2:-77320090 | MS.gene50024:intron |
CCACTCGGTAGAATCGTTGG+TGG | 0.626557 | 6.2:-77324457 | MS.gene50024:CDS |
ATGCCTCATTAGTGCTATTG+CGG | 0.629582 | 6.2:-77322055 | MS.gene50024:CDS |
TTGTGAAAGCCGTGAATACG+GGG | 0.631626 | 6.2:-77324144 | MS.gene50024:CDS |
GAATACGGGGAGTTTGTCGT+GGG | 0.633521 | 6.2:-77324131 | MS.gene50024:CDS |
GGTTACATATCACCATGGAC+CGG | 0.640641 | 6.2:-77322336 | MS.gene50024:CDS |
CAGATGCCAAGGTTATGTCA+TGG | 0.646526 | 6.2:-77321266 | MS.gene50024:CDS |
ATGAAGGACGACCAAGCAGT+AGG | 0.646628 | 6.2:+77322237 | None:intergenic |
TTATTGTTGACAATAACACC+TGG | 0.647406 | 6.2:-77321200 | MS.gene50024:CDS |
GGATAAAGATCTTACCCAGG+TGG | 0.654248 | 6.2:+77320076 | None:intergenic |
TAAAGAAATATGGGATTCAG+GGG | 0.658541 | 6.2:-77324287 | MS.gene50024:CDS |
GCTGTCTTATTATCGGTTTG+GGG | 0.658859 | 6.2:-77320122 | MS.gene50024:CDS |
ACTAATGAGGCATACAGCAG+GGG | 0.659990 | 6.2:+77322065 | None:intergenic |
GCAGCAGTGAGCATTAACCC+GGG | 0.660163 | 6.2:+77324424 | None:intergenic |
ATGCCAAGGTTATGTCATGG+TGG | 0.660270 | 6.2:-77321263 | MS.gene50024:CDS |
TCCGATTCATGGTATCCACT+CGG | 0.678655 | 6.2:-77324472 | MS.gene50024:CDS |
CGGAGAAACCGTGTTCTGTG+AGG | 0.683422 | 6.2:+77324515 | None:intergenic |
TGGATGGTGAGAATTGGTGG+AGG | 0.689233 | 6.2:-77320615 | MS.gene50024:CDS |
TTGGTGGTACACTCTACCCC+GGG | 0.690571 | 6.2:-77324441 | MS.gene50024:CDS |
CAGCAGTGAGCATTAACCCG+GGG | 0.702894 | 6.2:+77324425 | None:intergenic |
CATCTGGTTACATATCACCA+TGG | 0.708877 | 6.2:-77322341 | MS.gene50024:CDS |
GGATCATGGATTCATAACGA+AGG | 0.708972 | 6.2:+77324578 | None:intergenic |
CCACCAACGATTCTACCGAG+TGG | 0.715515 | 6.2:+77324457 | None:intergenic |
AAAGTCCAAACTGTACAGAG+TGG | 0.729222 | 6.2:-77321991 | MS.gene50024:CDS |
AGAGACGAGTGATGAATGCG+AGG | 0.735199 | 6.2:+77324608 | None:intergenic |
CTGTGAGGTAAAGAGTGGTG+CGG | 0.738326 | 6.2:+77324530 | None:intergenic |
CATAAAGTTGGAGTACCTGG+AGG | 0.742195 | 6.2:-77319356 | MS.gene50024:CDS |
GTGTTCTGTGAGGTAAAGAG+TGG | 0.767112 | 6.2:+77324525 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAAAATGCAATTTTAAAAAT+GGG | + | chr6.2:77320390-77320409 | None:intergenic | 10.0% |
!!! | TTAAAATGCAATTTTAAAAA+TGG | + | chr6.2:77320391-77320410 | None:intergenic | 10.0% |
!!! | TTAAATTTATTTGACTTTAA+GGG | - | chr6.2:77320304-77320323 | MS.gene50024:intron | 10.0% |
!!! | TTAAATTTATTTGAGTTTAA+TGG | - | chr6.2:77320626-77320645 | MS.gene50024:intron | 10.0% |
!!! | TTTAAAATGCAAATTTAAAA+CGG | + | chr6.2:77320709-77320728 | None:intergenic | 10.0% |
!! | ATGAAAAATCAATCTTTAAA+GGG | + | chr6.2:77321097-77321116 | None:intergenic | 15.0% |
!! | TATGAAAAATCAATCTTTAA+AGG | + | chr6.2:77321098-77321117 | None:intergenic | 15.0% |
!!! | AATCTTCAATTTTAAAAAAC+TGG | + | chr6.2:77324232-77324251 | None:intergenic | 15.0% |
!!! | CTTAAATTTATTTGACTTTA+AGG | - | chr6.2:77320303-77320322 | MS.gene50024:intron | 15.0% |
!!! | TATAATTGTATGTATGTTTT+GGG | - | chr6.2:77320050-77320069 | MS.gene50024:intron | 15.0% |
!!! | TTAAAATGCAAATTTAAAAC+GGG | + | chr6.2:77320708-77320727 | None:intergenic | 15.0% |
!!! | TTATAATTGTATGTATGTTT+TGG | - | chr6.2:77320049-77320068 | MS.gene50024:intron | 15.0% |
!!! | TTGAACAAATATATTTTCTT+AGG | - | chr6.2:77321361-77321380 | MS.gene50024:CDS | 15.0% |
!!! | TTTCATAATCTCAATTTTTT+TGG | - | chr6.2:77321111-77321130 | MS.gene50024:CDS | 15.0% |
!! | AAATCAACTAAAGTATAAGA+CGG | + | chr6.2:77320420-77320439 | None:intergenic | 20.0% |
!! | AATTTAAACTTGAACTTCAA+TGG | + | chr6.2:77321019-77321038 | None:intergenic | 20.0% |
!! | GGAATAACTATTTAAAAAGT+TGG | - | chr6.2:77323635-77323654 | MS.gene50024:intron | 20.0% |
!! | TAAGAATCTTATTAAAATGC+AGG | + | chr6.2:77323370-77323389 | None:intergenic | 20.0% |
!! | TACAAATATGCTTTCATAAA+TGG | + | chr6.2:77320785-77320804 | None:intergenic | 20.0% |
!! | TGTATTATTATTTACATGCA+GGG | - | chr6.2:77322514-77322533 | MS.gene50024:intron | 20.0% |
!! | TTAAAAAACTGGTAACATTT+GGG | + | chr6.2:77324221-77324240 | None:intergenic | 20.0% |
!! | TTTAAAAAACTGGTAACATT+TGG | + | chr6.2:77324222-77324241 | None:intergenic | 20.0% |
!!! | AACAAATATATTTTCTTAGG+TGG | - | chr6.2:77321364-77321383 | MS.gene50024:CDS | 20.0% |
!!! | AATTGAAGATTAGTTTATGA+TGG | - | chr6.2:77324241-77324260 | MS.gene50024:intron | 20.0% |
!!! | AATTTATTTGAGTTTAATGG+AGG | - | chr6.2:77320629-77320648 | MS.gene50024:intron | 20.0% |
!!! | AATTTTTGTCTAGATTTCTA+TGG | - | chr6.2:77323389-77323408 | MS.gene50024:intron | 20.0% |
!!! | ACAAATATATTTTCTTAGGT+GGG | - | chr6.2:77321365-77321384 | MS.gene50024:CDS | 20.0% |
!!! | AGTTTTCATTTTGATTATAG+TGG | - | chr6.2:77322472-77322491 | MS.gene50024:intron | 20.0% |
!!! | ATTTGCATTTTAAAGATAAC+CGG | - | chr6.2:77320715-77320734 | MS.gene50024:intron | 20.0% |
!!! | GTATGTAGAATTATTTTACA+CGG | - | chr6.2:77320982-77321001 | MS.gene50024:intron | 20.0% |
!!! | TTCTTTAAGCTTGATATTTT+GGG | - | chr6.2:77321295-77321314 | MS.gene50024:CDS | 20.0% |
!!! | TTGCGGTTATTTTTATATTA+CGG | - | chr6.2:77320908-77320927 | MS.gene50024:intron | 20.0% |
!!! | TTTCTTTAAGCTTGATATTT+TGG | - | chr6.2:77321294-77321313 | MS.gene50024:CDS | 20.0% |
! | AAAATTGTGTTTAGTTGATC+AGG | - | chr6.2:77321207-77321226 | MS.gene50024:CDS | 25.0% |
! | AAATATTACCGTAAAATTGC+TGG | - | chr6.2:77320441-77320460 | MS.gene50024:intron | 25.0% |
! | ACAATCTTCATAGTTATGTA+TGG | - | chr6.2:77321883-77321902 | MS.gene50024:intron | 25.0% |
! | AGATCTTTATCCTTTACTAT+TGG | - | chr6.2:77323959-77323978 | MS.gene50024:CDS | 25.0% |
! | AGTTATTCCACAAATTTATC+TGG | + | chr6.2:77323624-77323643 | None:intergenic | 25.0% |
! | AGTTTATTCATCAAAGAATG+AGG | - | chr6.2:77324278-77324297 | MS.gene50024:CDS | 25.0% |
! | ATACATAACTATGAAGATTG+TGG | + | chr6.2:77321884-77321903 | None:intergenic | 25.0% |
! | ATTTCTTCGGTAAAGAAATA+TGG | - | chr6.2:77319727-77319746 | MS.gene50024:intron | 25.0% |
! | CAAATGCCAAGATAAATTAA+TGG | + | chr6.2:77323543-77323562 | None:intergenic | 25.0% |
! | GCATGTTAAAATTTCAATCT+TGG | - | chr6.2:77324465-77324484 | MS.gene50024:CDS | 25.0% |
! | GCTAGATGCTAATTTAAATT+TGG | - | chr6.2:77321238-77321257 | MS.gene50024:CDS | 25.0% |
! | GTGCAATATATAACTTAAGA+TGG | + | chr6.2:77322999-77323018 | None:intergenic | 25.0% |
! | GTGTATTATTATTTACATGC+AGG | - | chr6.2:77322513-77322532 | MS.gene50024:intron | 25.0% |
! | TAAAGAAACGAGTAAAAACT+CGG | + | chr6.2:77323327-77323346 | None:intergenic | 25.0% |
! | TAGTAGCATATGAATAAATG+TGG | + | chr6.2:77322185-77322204 | None:intergenic | 25.0% |
! | TATATGGAAATCAAACATGA+AGG | + | chr6.2:77321806-77321825 | None:intergenic | 25.0% |
! | TCGTATAAGTATTACTGAAA+AGG | + | chr6.2:77322243-77322262 | None:intergenic | 25.0% |
! | TTACTTATTAATATCGTCAG+AGG | + | chr6.2:77322974-77322993 | None:intergenic | 25.0% |
! | TTAGCACCATTAATTTATCT+TGG | - | chr6.2:77323534-77323553 | MS.gene50024:intron | 25.0% |
! | TTATATTACGGTTACAAAGT+TGG | - | chr6.2:77320920-77320939 | MS.gene50024:intron | 25.0% |
! | TTTCTTCGGTAAAGAAATAT+GGG | - | chr6.2:77319728-77319747 | MS.gene50024:intron | 25.0% |
!! | AATGAGAATCAAGTATTTTG+CGG | - | chr6.2:77320891-77320910 | MS.gene50024:intron | 25.0% |
!! | AATTTATTTGACTTTAAGGG+AGG | - | chr6.2:77320307-77320326 | MS.gene50024:intron | 25.0% |
!! | ATGAGGTTTTCAAAATGTAA+AGG | - | chr6.2:77324577-77324596 | MS.gene50024:CDS | 25.0% |
!! | GTTTAAGTTAAGAAGCAATT+GGG | - | chr6.2:77320837-77320856 | MS.gene50024:intron | 25.0% |
!! | TGTTTAAGTTAAGAAGCAAT+TGG | - | chr6.2:77320836-77320855 | MS.gene50024:intron | 25.0% |
!! | TTAAATTAGCATCTAGCTTA+CGG | + | chr6.2:77321235-77321254 | None:intergenic | 25.0% |
!!! | AATTACAAAGTTTGTTGTTG+TGG | - | chr6.2:77320602-77320621 | MS.gene50024:CDS | 25.0% |
!!! | ACATTTTGAAAACCTCATTA+AGG | + | chr6.2:77324575-77324594 | None:intergenic | 25.0% |
!!! | ATTTTAAAAATGGGCTTATG+TGG | + | chr6.2:77320381-77320400 | None:intergenic | 25.0% |
!!! | GATATTTTGGGTTTTACATT+TGG | - | chr6.2:77321307-77321326 | MS.gene50024:CDS | 25.0% |
!!! | TTGTTTGGTTTTGAGTTTTA+GGG | + | chr6.2:77319352-77319371 | None:intergenic | 25.0% |
!!! | TTTCAAGTTGGTAAAAGTTA+GGG | + | chr6.2:77323180-77323199 | None:intergenic | 25.0% |
AACAACACCAATACATAAAG+CGG | + | chr6.2:77319993-77320012 | None:intergenic | 30.0% | |
AACGTTTGTGATTAACTGAT+GGG | - | chr6.2:77324175-77324194 | MS.gene50024:CDS | 30.0% | |
AAGCAAAGAATAAAACCTTC+CGG | + | chr6.2:77321710-77321729 | None:intergenic | 30.0% | |
AATCCAAAAAGAAAAACACC+TGG | + | chr6.2:77321558-77321577 | None:intergenic | 30.0% | |
AATGTTGTAATTACCCTCAT+CGG | - | chr6.2:77322294-77322313 | MS.gene50024:CDS | 30.0% | |
ACAGATCTTGATATATAACC+CGG | + | chr6.2:77319798-77319817 | None:intergenic | 30.0% | |
ATAAGACAGTTCAACATCTT+TGG | + | chr6.2:77323505-77323524 | None:intergenic | 30.0% | |
ATATGATCCTTAGCATATGT+TGG | + | chr6.2:77321736-77321755 | None:intergenic | 30.0% | |
ATATGCTATTCACTGTACTT+GGG | - | chr6.2:77322615-77322634 | MS.gene50024:intron | 30.0% | |
ATATTGCAAACCAATTGTCA+TGG | + | chr6.2:77322364-77322383 | None:intergenic | 30.0% | |
ATCCTTTACTATTGGAGTAT+TGG | - | chr6.2:77323967-77323986 | MS.gene50024:CDS | 30.0% | |
ATTCCCGTTATTCAAAACAA+TGG | - | chr6.2:77324342-77324361 | MS.gene50024:CDS | 30.0% | |
CATTTGACCAGATAAATTTG+TGG | - | chr6.2:77323614-77323633 | MS.gene50024:intron | 30.0% | |
GAACTGCAAATCTAAGAAAA+TGG | + | chr6.2:77319644-77319663 | None:intergenic | 30.0% | |
GACGTTAATAAACCTTAATG+AGG | - | chr6.2:77324560-77324579 | MS.gene50024:CDS | 30.0% | |
GCAAAATACTTGATTCTCAT+TGG | + | chr6.2:77320892-77320911 | None:intergenic | 30.0% | |
GCAATACGATGAATTATCAT+TGG | + | chr6.2:77320677-77320696 | None:intergenic | 30.0% | |
GTAAAGAAATATGGGATTCA+GGG | - | chr6.2:77319736-77319755 | MS.gene50024:intron | 30.0% | |
TAAAGAAATATGGGATTCAG+GGG | - | chr6.2:77319737-77319756 | MS.gene50024:intron | 30.0% | |
TAACGTTTGTGATTAACTGA+TGG | - | chr6.2:77324174-77324193 | MS.gene50024:CDS | 30.0% | |
TACATTTATTAATGCTGTCC+TGG | - | chr6.2:77323282-77323301 | MS.gene50024:intron | 30.0% | |
TACCAATACTCCAATAGTAA+AGG | + | chr6.2:77323972-77323991 | None:intergenic | 30.0% | |
TACGAAAGATGAATTAGTGT+TGG | - | chr6.2:77322258-77322277 | MS.gene50024:CDS | 30.0% | |
TATATATCAAGATCTGTTGC+TGG | - | chr6.2:77319801-77319820 | MS.gene50024:intron | 30.0% | |
TCTTATTCAATGCATTCGAA+AGG | + | chr6.2:77324517-77324536 | None:intergenic | 30.0% | |
TGAAATATGGATCGAATTCA+TGG | + | chr6.2:77319470-77319489 | None:intergenic | 30.0% | |
TGGAAATAAGGACATAAAGT+TGG | - | chr6.2:77324656-77324675 | MS.gene50024:CDS | 30.0% | |
TTATTGTTGACAATAACACC+TGG | - | chr6.2:77322824-77322843 | MS.gene50024:intron | 30.0% | |
TTCCCGTTATTCAAAACAAT+GGG | - | chr6.2:77324343-77324362 | MS.gene50024:CDS | 30.0% | |
TTTGTCTAGATTTCTATGGA+TGG | - | chr6.2:77323393-77323412 | MS.gene50024:intron | 30.0% | |
! | AACTGTTTCAAGCATTTTTG+AGG | - | chr6.2:77321605-77321624 | MS.gene50024:intron | 30.0% |
! | AGGAGTTTTTCCTGTAATAA+AGG | - | chr6.2:77323429-77323448 | MS.gene50024:intron | 30.0% |
! | AGGTGTTTTTCTTTTTGGAT+TGG | - | chr6.2:77321557-77321576 | MS.gene50024:intron | 30.0% |
! | ATCTTATGATAATGAAGGAG+TGG | - | chr6.2:77319824-77319843 | MS.gene50024:intron | 30.0% |
! | GGTGTTTTTCTTTTTGGATT+GGG | - | chr6.2:77321558-77321577 | MS.gene50024:intron | 30.0% |
! | TAATCTGGTTCCTTTATTAC+AGG | + | chr6.2:77323442-77323461 | None:intergenic | 30.0% |
! | TCTTTACCTTTTTCCTTGAT+AGG | - | chr6.2:77323874-77323893 | MS.gene50024:intron | 30.0% |
! | TTACCAGGTGTTTTTCTTTT+TGG | - | chr6.2:77321552-77321571 | MS.gene50024:intron | 30.0% |
! | TTGCTGTTAATGATGATGAA+AGG | - | chr6.2:77320255-77320274 | MS.gene50024:intron | 30.0% |
! | TTGTTAGCTGATTTATGCAT+AGG | - | chr6.2:77323812-77323831 | MS.gene50024:intron | 30.0% |
!! | AGGTGTTGAAATTGGAAATA+AGG | - | chr6.2:77324644-77324663 | MS.gene50024:CDS | 30.0% |
!! | ATCTTTGGAATTCAAGTTGT+AGG | - | chr6.2:77324432-77324451 | MS.gene50024:CDS | 30.0% |
!! | CTTTCAAGTTGGTAAAAGTT+AGG | + | chr6.2:77323181-77323200 | None:intergenic | 30.0% |
!! | TTTTGAATAACGGGAATGAT+GGG | + | chr6.2:77324339-77324358 | None:intergenic | 30.0% |
!!! | GGCGTTTGGTTATTTTTATA+TGG | - | chr6.2:77319926-77319945 | MS.gene50024:intron | 30.0% |
!!! | GTTGTTTGGTTTTGAGTTTT+AGG | + | chr6.2:77319353-77319372 | None:intergenic | 30.0% |
!!! | GTTTTATGAGCACTTTTTTG+TGG | - | chr6.2:77321172-77321191 | MS.gene50024:CDS | 30.0% |
!!! | GTTTTGAGTTTTAGGGTTTT+CGG | + | chr6.2:77319345-77319364 | None:intergenic | 30.0% |
AAAGAGAAATGCCAATATCC+AGG | + | chr6.2:77323303-77323322 | None:intergenic | 35.0% | |
AAAGGATAAAGATCTTACCC+AGG | + | chr6.2:77323954-77323973 | None:intergenic | 35.0% | |
AACTTGTCTCTTGAAATGAC+AGG | - | chr6.2:77324607-77324626 | MS.gene50024:CDS | 35.0% | |
AAGTGAAACCACCTAAAAAC+AGG | - | chr6.2:77324730-77324749 | MS.gene50024:CDS | 35.0% | |
AATAACTGTTCTGTTTCCCA+TGG | + | chr6.2:77322809-77322828 | None:intergenic | 35.0% | |
AATACACACATAGCAACTGT+TGG | - | chr6.2:77322850-77322869 | MS.gene50024:intron | 35.0% | |
AATAGCACCTGATTCATACT+GGG | + | chr6.2:77323733-77323752 | None:intergenic | 35.0% | |
AATGAGAATCAAGCATTTGC+CGG | + | chr6.2:77320737-77320756 | None:intergenic | 35.0% | |
AATGTCATCTTATGAGGATG+AGG | - | chr6.2:77322879-77322898 | MS.gene50024:intron | 35.0% | |
ACGATTGTAGCGTATTTCTT+CGG | - | chr6.2:77319714-77319733 | MS.gene50024:intron | 35.0% | |
AGGCATTTACTACTCAGAAT+TGG | - | chr6.2:77324691-77324710 | MS.gene50024:CDS | 35.0% | |
ATACACACATAGCAACTGTT+GGG | - | chr6.2:77322851-77322870 | MS.gene50024:intron | 35.0% | |
ATACAGCAAAGCAAACAACT+AGG | + | chr6.2:77321399-77321418 | None:intergenic | 35.0% | |
ATCACTGCTATCTCAACAAA+GGG | - | chr6.2:77324136-77324155 | MS.gene50024:CDS | 35.0% | |
ATCGAACCAATTCCAAAACT+CGG | + | chr6.2:77319532-77319551 | None:intergenic | 35.0% | |
ATGGGAGTCATACTTGTTTA+TGG | - | chr6.2:77324193-77324212 | MS.gene50024:intron | 35.0% | |
ATTAATGCTGTCCTGGATAT+TGG | - | chr6.2:77323289-77323308 | MS.gene50024:intron | 35.0% | |
CAACTTGAATTCCAAAGATC+TGG | + | chr6.2:77324431-77324450 | None:intergenic | 35.0% | |
CGTTATTCAAAACAATGGGA+GGG | - | chr6.2:77324347-77324366 | MS.gene50024:CDS | 35.0% | |
CTACTGTGAAGAATTTGACT+CGG | - | chr6.2:77321998-77322017 | MS.gene50024:CDS | 35.0% | |
CTTGACACTAGTTGCATATA+AGG | + | chr6.2:77324087-77324106 | None:intergenic | 35.0% | |
CTTGTACCTATCAAGGAAAA+AGG | + | chr6.2:77323883-77323902 | None:intergenic | 35.0% | |
GAAGTAACTAGTTGAGCAAA+AGG | - | chr6.2:77322107-77322126 | MS.gene50024:CDS | 35.0% | |
GAGGATGTAGATTAAACCTA+GGG | + | chr6.2:77319400-77319419 | None:intergenic | 35.0% | |
GATATGCTATTCACTGTACT+TGG | - | chr6.2:77322614-77322633 | MS.gene50024:intron | 35.0% | |
GATGAGGGTAATTACAACAT+TGG | + | chr6.2:77322295-77322314 | None:intergenic | 35.0% | |
GCAATACGACAAGTTATCAT+TGG | + | chr6.2:77320359-77320378 | None:intergenic | 35.0% | |
GCAATATCATGAGATCTCAT+TGG | - | chr6.2:77320951-77320970 | MS.gene50024:intron | 35.0% | |
GGAAAAGGAACAGCAATATA+TGG | + | chr6.2:77321822-77321841 | None:intergenic | 35.0% | |
GGAGAATATCGTGTAGATAA+AGG | - | chr6.2:77323472-77323491 | MS.gene50024:intron | 35.0% | |
GGTAAAGAAATATGGGATTC+AGG | - | chr6.2:77319735-77319754 | MS.gene50024:intron | 35.0% | |
TACTGTGAAGAATTTGACTC+GGG | - | chr6.2:77321999-77322018 | MS.gene50024:CDS | 35.0% | |
TAGCGTTTGTCATAGAGAAA+TGG | + | chr6.2:77323056-77323075 | None:intergenic | 35.0% | |
TATTACTGAAAAGGAGCAGA+TGG | + | chr6.2:77322234-77322253 | None:intergenic | 35.0% | |
TCAGAGACAGAAGCAATAAT+TGG | + | chr6.2:77321760-77321779 | None:intergenic | 35.0% | |
TGGATAGTTTCAACATGTGT+TGG | - | chr6.2:77321258-77321277 | MS.gene50024:CDS | 35.0% | |
TGTTCAATCTGGTGAACATA+TGG | - | chr6.2:77320115-77320134 | MS.gene50024:CDS | 35.0% | |
TTAAACCTAGGGTTGTGATT+CGG | + | chr6.2:77319389-77319408 | None:intergenic | 35.0% | |
TTACTGGGAGATATTCATTG+AGG | - | chr6.2:77320015-77320034 | MS.gene50024:intron | 35.0% | |
TTGGATGTCGATGTGTATAA+CGG | + | chr6.2:77320340-77320359 | None:intergenic | 35.0% | |
TTTCTATGGATGGTGAGAAT+TGG | - | chr6.2:77323403-77323422 | MS.gene50024:intron | 35.0% | |
! | AAGCTGTCTTATTATCGGTT+TGG | - | chr6.2:77323900-77323919 | MS.gene50024:CDS | 35.0% |
! | AGATCTTGGATTGTTGATGA+TGG | + | chr6.2:77319309-77319328 | None:intergenic | 35.0% |
! | AGTTAGCATTTTGTCTCTTG+AGG | - | chr6.2:77321514-77321533 | MS.gene50024:intron | 35.0% |
! | AGTTGTTTGCTTTGCTGTAT+TGG | - | chr6.2:77321399-77321418 | MS.gene50024:CDS | 35.0% |
! | ATAATGCTGTTTGTTTACCG+TGG | - | chr6.2:77321450-77321469 | MS.gene50024:CDS | 35.0% |
! | ATTATCGTGAGGCTTACTTT+TGG | - | chr6.2:77322716-77322735 | MS.gene50024:intron | 35.0% |
! | ATTTTTATATGGTTTCCGCG+TGG | - | chr6.2:77319937-77319956 | MS.gene50024:intron | 35.0% |
! | CAACGTTTTTCCATGACAAT+TGG | - | chr6.2:77322351-77322370 | MS.gene50024:CDS | 35.0% |
! | CTTACAAGCATGTATTTTGC+TGG | - | chr6.2:77321907-77321926 | MS.gene50024:intron | 35.0% |
! | CTTTTACCAACTTGAAAGAG+TGG | - | chr6.2:77323183-77323202 | MS.gene50024:intron | 35.0% |
! | GATTGGGTAAAGCATTTACT+CGG | - | chr6.2:77321574-77321593 | MS.gene50024:intron | 35.0% |
! | GCAAAATGCCAGCAATTTTA+CGG | + | chr6.2:77320452-77320471 | None:intergenic | 35.0% |
! | GCTGGATCTTATGATAATGA+AGG | - | chr6.2:77319819-77319838 | MS.gene50024:intron | 35.0% |
! | GCTTGATTGTTGTTGATGAA+AGG | - | chr6.2:77320576-77320595 | MS.gene50024:CDS | 35.0% |
! | GGGTTTTACATTTGGATTCA+TGG | - | chr6.2:77321315-77321334 | MS.gene50024:CDS | 35.0% |
! | GGTACAAGCTGTCTTATTAT+CGG | - | chr6.2:77323895-77323914 | MS.gene50024:CDS | 35.0% |
! | TTTTTATATGGTTTCCGCGT+GGG | - | chr6.2:77319938-77319957 | MS.gene50024:intron | 35.0% |
!! | AGCTGTCTTATTATCGGTTT+GGG | - | chr6.2:77323901-77323920 | MS.gene50024:CDS | 35.0% |
!! | CATGTATTTTGCTGGTGTTA+TGG | - | chr6.2:77321915-77321934 | MS.gene50024:intron | 35.0% |
!! | GCTTTATGTATTGGTGTTGT+TGG | - | chr6.2:77319992-77320011 | MS.gene50024:intron | 35.0% |
!! | GTTTTGAATAACGGGAATGA+TGG | + | chr6.2:77324340-77324359 | None:intergenic | 35.0% |
!! | TATTGGTGTTGTTGGTTACT+GGG | - | chr6.2:77320000-77320019 | MS.gene50024:intron | 35.0% |
!!! | CCTCCCATTGTTTTGAATAA+CGG | + | chr6.2:77324349-77324368 | None:intergenic | 35.0% |
!!! | CTCCCATTGTTTTGAATAAC+GGG | + | chr6.2:77324348-77324367 | None:intergenic | 35.0% |
!!! | GGTGCTATGATGTTACTTTT+CGG | - | chr6.2:77322571-77322590 | MS.gene50024:intron | 35.0% |
AAAGGAACTGGTGCTTCAAA+AGG | - | chr6.2:77322063-77322082 | MS.gene50024:CDS | 40.0% | |
AAAGTCCAAACTGTACAGAG+TGG | - | chr6.2:77322033-77322052 | MS.gene50024:CDS | 40.0% | |
AAGACAGCTTGTACCTATCA+AGG | + | chr6.2:77323890-77323909 | None:intergenic | 40.0% | |
AATTAACCTATGTGCTTGCG+AGG | - | chr6.2:77321035-77321054 | MS.gene50024:intron | 40.0% | |
ACAATCAAGCATTAACCCAG+AGG | + | chr6.2:77320566-77320585 | None:intergenic | 40.0% | |
ACTCTTTACCTCACAGAACA+CGG | - | chr6.2:77319501-77319520 | MS.gene50024:intron | 40.0% | |
AGCGCTTGAAGCAAAAATAG+AGG | + | chr6.2:77321852-77321871 | None:intergenic | 40.0% | |
ATACCGCAATAGCACTAATG+AGG | + | chr6.2:77321975-77321994 | None:intergenic | 40.0% | |
ATAGCACCTGATTCATACTG+GGG | + | chr6.2:77323732-77323751 | None:intergenic | 40.0% | |
ATTAACCTATGTGCTTGCGA+GGG | - | chr6.2:77321036-77321055 | MS.gene50024:intron | 40.0% | |
CAATAGCACCTGATTCATAC+TGG | + | chr6.2:77323734-77323753 | None:intergenic | 40.0% | |
CAATGATACAGTAGCATCCA+CGG | + | chr6.2:77321470-77321489 | None:intergenic | 40.0% | |
CAATGCAATGCAATGCAATG+TGG | + | chr6.2:77320180-77320199 | None:intergenic | 40.0% | |
CACGATATTCTCCATTGACA+AGG | + | chr6.2:77323465-77323484 | None:intergenic | 40.0% | |
CACTGAAGCTTAACTAGGTT+GGG | - | chr6.2:77323681-77323700 | MS.gene50024:intron | 40.0% | |
CATCAAAGAATGAGGCAAGA+AGG | - | chr6.2:77324286-77324305 | MS.gene50024:CDS | 40.0% | |
CATCACTGCTATCTCAACAA+AGG | - | chr6.2:77324135-77324154 | MS.gene50024:CDS | 40.0% | |
CATCTGGTTACATATCACCA+TGG | - | chr6.2:77321683-77321702 | MS.gene50024:intron | 40.0% | |
CATCTTTGACGATTATCGTG+AGG | - | chr6.2:77322705-77322724 | MS.gene50024:intron | 40.0% | |
CATGAGATCTCATTGGATGT+CGG | - | chr6.2:77320958-77320977 | MS.gene50024:intron | 40.0% | |
CCGTTATTCAAAACAATGGG+AGG | - | chr6.2:77324346-77324365 | MS.gene50024:CDS | 40.0% | |
CCTACAATGTGCATGAGTTT+GGG | - | chr6.2:77324309-77324328 | MS.gene50024:CDS | 40.0% | |
CGAGGATGTAGATTAAACCT+AGG | + | chr6.2:77319401-77319420 | None:intergenic | 40.0% | |
CTACTAGTACACAGGGATTA+GGG | + | chr6.2:77324381-77324400 | None:intergenic | 40.0% | |
GAACCAGATTACCTTGTCAA+TGG | - | chr6.2:77323451-77323470 | MS.gene50024:intron | 40.0% | |
GACTATGTGTTAGTCGTGTT+TGG | - | chr6.2:77322931-77322950 | MS.gene50024:intron | 40.0% | |
GCTTGATCCAACATATGCTA+AGG | - | chr6.2:77321726-77321745 | MS.gene50024:intron | 40.0% | |
GGATCATGGATTCATAACGA+AGG | + | chr6.2:77319449-77319468 | None:intergenic | 40.0% | |
GGCAAATGCTTGATTCTCAT+TGG | - | chr6.2:77320736-77320755 | MS.gene50024:intron | 40.0% | |
GGGTTTCAACATGTTCAATC+TGG | - | chr6.2:77320104-77320123 | MS.gene50024:CDS | 40.0% | |
GGTGAACATATGGCTTCTAT+GGG | - | chr6.2:77320125-77320144 | MS.gene50024:CDS | 40.0% | |
GGTTATCAAATCACTGCCAT+GGG | - | chr6.2:77322790-77322809 | MS.gene50024:intron | 40.0% | |
GTAGTATTCGACGCGAAAAA+TGG | + | chr6.2:77319696-77319715 | None:intergenic | 40.0% | |
GTTTGTGAAAGCCGTGAATA+CGG | - | chr6.2:77319878-77319897 | MS.gene50024:intron | 40.0% | |
TACCAACTTGAAAGAGTGGT+TGG | - | chr6.2:77323187-77323206 | MS.gene50024:intron | 40.0% | |
TATGTGTTAGTCGTGTTTGG+TGG | - | chr6.2:77322934-77322953 | MS.gene50024:intron | 40.0% | |
TCTCCATTGACAAGGTAATC+TGG | + | chr6.2:77323457-77323476 | None:intergenic | 40.0% | |
TGAAACCACCTAAAAACAGG+TGG | - | chr6.2:77324733-77324752 | MS.gene50024:CDS | 40.0% | |
TGCTATGTGTGTATTGTTCC+AGG | + | chr6.2:77322845-77322864 | None:intergenic | 40.0% | |
TGCTTCAAAAGGCTCTTCTA+AGG | - | chr6.2:77322074-77322093 | MS.gene50024:CDS | 40.0% | |
TGGATCGAATTCATGGATCA+TGG | + | chr6.2:77319463-77319482 | None:intergenic | 40.0% | |
TGGTGAACATATGGCTTCTA+TGG | - | chr6.2:77320124-77320143 | MS.gene50024:CDS | 40.0% | |
TGGTTATCAAATCACTGCCA+TGG | - | chr6.2:77322789-77322808 | MS.gene50024:intron | 40.0% | |
TGTAATTACCCTCATCGGTA+TGG | - | chr6.2:77322299-77322318 | MS.gene50024:CDS | 40.0% | |
TTACTGCCTACTAGTACACA+GGG | + | chr6.2:77324388-77324407 | None:intergenic | 40.0% | |
TTTGTGAAAGCCGTGAATAC+GGG | - | chr6.2:77319879-77319898 | MS.gene50024:intron | 40.0% | |
! | ACATCATAGCACCGTTCTTT+TGG | + | chr6.2:77322564-77322583 | None:intergenic | 40.0% |
! | ATGCCTCATTAGTGCTATTG+CGG | - | chr6.2:77321969-77321988 | MS.gene50024:CDS | 40.0% |
! | CTATGCAGATTCGGTTTGTT+GGG | - | chr6.2:77320084-77320103 | MS.gene50024:intron | 40.0% |
! | GCTTGATTCTCATTGGTTGT+CGG | - | chr6.2:77320743-77320762 | MS.gene50024:intron | 40.0% |
! | GTTATGTCATGGTGGGATTA+TGG | - | chr6.2:77322769-77322788 | MS.gene50024:intron | 40.0% |
! | GTTTAATGGAGGTGCATTGT+CGG | - | chr6.2:77320640-77320659 | MS.gene50024:intron | 40.0% |
! | TGCTTTGCTGTATTGGAAGT+TGG | - | chr6.2:77321406-77321425 | MS.gene50024:CDS | 40.0% |
! | TTAAAGGGTGTAGTCTAACG+AGG | + | chr6.2:77321082-77321101 | None:intergenic | 40.0% |
! | TTCCAACCACTCTTTCAAGT+TGG | + | chr6.2:77323192-77323211 | None:intergenic | 40.0% |
! | TTTAATGGAGGTGCATTGTC+GGG | - | chr6.2:77320641-77320660 | MS.gene50024:intron | 40.0% |
! | TTTTATATGGTTTCCGCGTG+GGG | - | chr6.2:77319939-77319958 | MS.gene50024:intron | 40.0% |
!! | AGAATTTGACTCGGGTTGTT+AGG | - | chr6.2:77322007-77322026 | MS.gene50024:CDS | 40.0% |
!! | ATAGCACCGTTCTTTTGGAA+AGG | + | chr6.2:77322559-77322578 | None:intergenic | 40.0% |
!! | ATTGGTTCGATTCCGATTCA+TGG | - | chr6.2:77319541-77319560 | MS.gene50024:intron | 40.0% |
!! | CAAGTTGGTAAAAGTTAGGG+TGG | + | chr6.2:77323177-77323196 | None:intergenic | 40.0% |
!! | GAATTTGACTCGGGTTGTTA+GGG | - | chr6.2:77322008-77322027 | MS.gene50024:CDS | 40.0% |
!! | GCTGTCTTATTATCGGTTTG+GGG | - | chr6.2:77323902-77323921 | MS.gene50024:CDS | 40.0% |
!! | GTATTGGTGTTGTTGGTTAC+TGG | - | chr6.2:77319999-77320018 | MS.gene50024:intron | 40.0% |
!! | TGTTGCTTGCTATGCAGATT+CGG | - | chr6.2:77320075-77320094 | MS.gene50024:intron | 40.0% |
!! | TTTGGTGCCGCTTTATGTAT+TGG | - | chr6.2:77319983-77320002 | MS.gene50024:intron | 40.0% |
!!! | CTGACTTGGATTGTTTTACC+AGG | - | chr6.2:77321537-77321556 | MS.gene50024:intron | 40.0% |
!!! | GAGTTTTAGGGTTTTCGGAA+GGG | + | chr6.2:77319340-77319359 | None:intergenic | 40.0% |
!!! | GTTTCTCCGAGTTTTGGAAT+TGG | - | chr6.2:77319523-77319542 | MS.gene50024:intron | 40.0% |
!!! | TGAGTTTTAGGGTTTTCGGA+AGG | + | chr6.2:77319341-77319360 | None:intergenic | 40.0% |
AAAAACATAACCACCCCACG+CGG | + | chr6.2:77319955-77319974 | None:intergenic | 45.0% | |
AAATATGGGATTCAGGGGCT+GGG | - | chr6.2:77319742-77319761 | MS.gene50024:intron | 45.0% | |
AAGCAAAAATAGAGGCCAGC+AGG | + | chr6.2:77321844-77321863 | None:intergenic | 45.0% | |
AATCGTCAAAGATGACCCTC+TGG | + | chr6.2:77322699-77322718 | None:intergenic | 45.0% | |
ACAGAATATGGCAAACCACC+TGG | - | chr6.2:77323933-77323952 | MS.gene50024:CDS | 45.0% | |
ACCGAGTGGATACCATGAAT+CGG | + | chr6.2:77319556-77319575 | None:intergenic | 45.0% | |
ACTAATGAGGCATACAGCAG+GGG | + | chr6.2:77321962-77321981 | None:intergenic | 45.0% | |
AGCAAAAATAGAGGCCAGCA+GGG | + | chr6.2:77321843-77321862 | None:intergenic | 45.0% | |
ATCAAGCATTAACCCAGAGG+TGG | + | chr6.2:77320563-77320582 | None:intergenic | 45.0% | |
ATCACTGTAACCAGTGCAGT+TGG | - | chr6.2:77321628-77321647 | MS.gene50024:intron | 45.0% | |
ATCCCACCATGACATAACCT+TGG | + | chr6.2:77322767-77322786 | None:intergenic | 45.0% | |
ATGCCAAGGTTATGTCATGG+TGG | - | chr6.2:77322761-77322780 | MS.gene50024:intron | 45.0% | |
CAAACTGTACAGAGTGGTTC+TGG | - | chr6.2:77322039-77322058 | MS.gene50024:CDS | 45.0% | |
CACCTAAAAACAGGTGGTAG+TGG | - | chr6.2:77324739-77324758 | MS.gene50024:CDS | 45.0% | |
CACTAATGAGGCATACAGCA+GGG | + | chr6.2:77321963-77321982 | None:intergenic | 45.0% | |
CAGAACCACTCTGTACAGTT+TGG | + | chr6.2:77322041-77322060 | None:intergenic | 45.0% | |
CAGAATATGGCAAACCACCT+GGG | - | chr6.2:77323934-77323953 | MS.gene50024:CDS | 45.0% | |
CAGATGCCAAGGTTATGTCA+TGG | - | chr6.2:77322758-77322777 | MS.gene50024:intron | 45.0% | |
CATGACATAACCTTGGCATC+TGG | + | chr6.2:77322760-77322779 | None:intergenic | 45.0% | |
CCCAAACTCATGCACATTGT+AGG | + | chr6.2:77324312-77324331 | None:intergenic | 45.0% | |
CCTAATCCCTGTGTACTAGT+AGG | - | chr6.2:77324379-77324398 | MS.gene50024:CDS | 45.0% | |
CCTACTAGTACACAGGGATT+AGG | + | chr6.2:77324382-77324401 | None:intergenic | 45.0% | |
CTATGGATGGTGAGAATTGG+TGG | - | chr6.2:77323406-77323425 | MS.gene50024:intron | 45.0% | |
CTCAATTGTCTTGGCTGCAA+GGG | - | chr6.2:77322663-77322682 | MS.gene50024:intron | 45.0% | |
CTCATCTCCCTCAATTGTCT+TGG | - | chr6.2:77322654-77322673 | MS.gene50024:intron | 45.0% | |
CTTACTGCCTACTAGTACAC+AGG | + | chr6.2:77324389-77324408 | None:intergenic | 45.0% | |
CTTGCAGCCAAGACAATTGA+GGG | + | chr6.2:77322664-77322683 | None:intergenic | 45.0% | |
GAAGGGAATTGAGGAGATCT+TGG | + | chr6.2:77319323-77319342 | None:intergenic | 45.0% | |
GAATAAAACCTTCCGGTCCA+TGG | + | chr6.2:77321703-77321722 | None:intergenic | 45.0% | |
GCACTGAAGCTTAACTAGGT+TGG | - | chr6.2:77323680-77323699 | MS.gene50024:intron | 45.0% | |
GCCTACAATGTGCATGAGTT+TGG | - | chr6.2:77324308-77324327 | MS.gene50024:CDS | 45.0% | |
GCGTGCAATGTCATCTTATG+AGG | - | chr6.2:77322873-77322892 | MS.gene50024:intron | 45.0% | |
GGATAAAGATCTTACCCAGG+TGG | + | chr6.2:77323951-77323970 | None:intergenic | 45.0% | |
GGTGCAGTAGGTATGGTAAT+AGG | - | chr6.2:77322320-77322339 | MS.gene50024:CDS | 45.0% | |
GGTTACATATCACCATGGAC+CGG | - | chr6.2:77321688-77321707 | MS.gene50024:intron | 45.0% | |
GTGGTGCGGTAGTTGAAATA+TGG | + | chr6.2:77319483-77319502 | None:intergenic | 45.0% | |
GTGTCGAGCTGTGAATATAG+TGG | + | chr6.2:77323087-77323106 | None:intergenic | 45.0% | |
GTGTTCTGTGAGGTAAAGAG+TGG | + | chr6.2:77319502-77319521 | None:intergenic | 45.0% | |
TAGCACCTGATTCATACTGG+GGG | + | chr6.2:77323731-77323750 | None:intergenic | 45.0% | |
TATCCACTCGGTAGAATCGT+TGG | - | chr6.2:77319564-77319583 | MS.gene50024:intron | 45.0% | |
TCAAGCATTAACCCAGAGGT+GGG | + | chr6.2:77320562-77320581 | None:intergenic | 45.0% | |
TCAATTGTCTTGGCTGCAAG+GGG | - | chr6.2:77322664-77322683 | MS.gene50024:intron | 45.0% | |
TCCCAGCCTTTCCAAAAGAA+CGG | - | chr6.2:77322550-77322569 | MS.gene50024:intron | 45.0% | |
TCCGATTCATGGTATCCACT+CGG | - | chr6.2:77319552-77319571 | MS.gene50024:intron | 45.0% | |
TGCCAAGGTTATGTCATGGT+GGG | - | chr6.2:77322762-77322781 | MS.gene50024:intron | 45.0% | |
TTGTGAAAGCCGTGAATACG+GGG | - | chr6.2:77319880-77319899 | MS.gene50024:intron | 45.0% | |
TTTAACCCTCGCAAGCACAT+AGG | + | chr6.2:77321044-77321063 | None:intergenic | 45.0% | |
TTTGTCTCTTGAGGCTGACT+TGG | - | chr6.2:77321523-77321542 | MS.gene50024:intron | 45.0% | |
! | AACACGGTTTCTCCGAGTTT+TGG | - | chr6.2:77319517-77319536 | MS.gene50024:intron | 45.0% |
! | ATCTCGAGTTGCCAGATCTT+TGG | - | chr6.2:77324417-77324436 | MS.gene50024:CDS | 45.0% |
! | CATAAAGTTGGAGTACCTGG+AGG | - | chr6.2:77324668-77324687 | MS.gene50024:CDS | 45.0% |
! | GCTATGCAGATTCGGTTTGT+TGG | - | chr6.2:77320083-77320102 | MS.gene50024:intron | 45.0% |
! | GGACATAAAGTTGGAGTACC+TGG | - | chr6.2:77324665-77324684 | MS.gene50024:CDS | 45.0% |
! | GGGTGTCTTTTTCTTGCTTC+AGG | - | chr6.2:77320145-77320164 | MS.gene50024:intron | 45.0% |
! | GTTGGTAAAAGTTAGGGTGG+CGG | + | chr6.2:77323174-77323193 | None:intergenic | 45.0% |
! | TGCATTGATCGCGATTTGTC+CGG | - | chr6.2:77319776-77319795 | MS.gene50024:intron | 45.0% |
!! | ACCGTTCTTTTGGAAAGGCT+GGG | + | chr6.2:77322554-77322573 | None:intergenic | 45.0% |
!! | AGTGGTTCTGGTAAAGGAAC+TGG | - | chr6.2:77322051-77322070 | MS.gene50024:CDS | 45.0% |
!! | GAGGAGGAGTTCTTGTTGTT+TGG | + | chr6.2:77319367-77319386 | None:intergenic | 45.0% |
!! | GTACAGAGTGGTTCTGGTAA+AGG | - | chr6.2:77322045-77322064 | MS.gene50024:CDS | 45.0% |
!!! | TTATGTTTTTATTATAAATT+TGG | - | chr6.2:77319965-77319984 | MS.gene50024:intron | 5.0% |
AATAGAGGCCAGCAGGGAAA+AGG | + | chr6.2:77321837-77321856 | None:intergenic | 50.0% | |
ACATATCACCATGGACCGGA+AGG | - | chr6.2:77321692-77321711 | MS.gene50024:intron | 50.0% | |
AGAGACGAGTGATGAATGCG+AGG | + | chr6.2:77319419-77319438 | None:intergenic | 50.0% | |
AGCACCTGATTCATACTGGG+GGG | + | chr6.2:77323730-77323749 | None:intergenic | 50.0% | |
AGCAGCAGTGAGCATTAACC+CGG | + | chr6.2:77319604-77319623 | None:intergenic | 50.0% | |
ATGAAGGACGACCAAGCAGT+AGG | + | chr6.2:77321790-77321809 | None:intergenic | 50.0% | |
ATGTAACTGACCCCACCTCT+GGG | - | chr6.2:77320548-77320567 | MS.gene50024:CDS | 50.0% | |
CAAGCATTAACCCAGAGGTG+GGG | + | chr6.2:77320561-77320580 | None:intergenic | 50.0% | |
CCTCAATTGTCTTGGCTGCA+AGG | - | chr6.2:77322662-77322681 | MS.gene50024:intron | 50.0% | |
CCTTGCAGCCAAGACAATTG+AGG | + | chr6.2:77322665-77322684 | None:intergenic | 50.0% | |
CGACAAACTCCCCGTATTCA+CGG | + | chr6.2:77319892-77319911 | None:intergenic | 50.0% | |
CGACACAACACTTGCACATG+TGG | - | chr6.2:77323101-77323120 | MS.gene50024:intron | 50.0% | |
CTACTGCACCATACCGATGA+GGG | + | chr6.2:77322310-77322329 | None:intergenic | 50.0% | |
CTGTGAGGTAAAGAGTGGTG+CGG | + | chr6.2:77319497-77319516 | None:intergenic | 50.0% | |
GAAATATGGGATTCAGGGGC+TGG | - | chr6.2:77319741-77319760 | MS.gene50024:intron | 50.0% | |
GAATACGGGGAGTTTGTCGT+GGG | - | chr6.2:77319893-77319912 | MS.gene50024:intron | 50.0% | |
GACATAACCTTGGCATCTGG+TGG | + | chr6.2:77322757-77322776 | None:intergenic | 50.0% | |
GAGTAGTAAATGCCTCCTCC+AGG | + | chr6.2:77324686-77324705 | None:intergenic | 50.0% | |
GCACTAATGAGGCATACAGC+AGG | + | chr6.2:77321964-77321983 | None:intergenic | 50.0% | |
GCTTGCGAGGGTTAAAACTG+AGG | - | chr6.2:77321048-77321067 | MS.gene50024:intron | 50.0% | |
GGGGAGCTGACAACAGAATA+TGG | - | chr6.2:77323921-77323940 | MS.gene50024:CDS | 50.0% | |
TATGTAACTGACCCCACCTC+TGG | - | chr6.2:77320547-77320566 | MS.gene50024:CDS | 50.0% | |
TCGGTATGGTGCAGTAGGTA+TGG | - | chr6.2:77322313-77322332 | MS.gene50024:CDS | 50.0% | |
TGAATACGGGGAGTTTGTCG+TGG | - | chr6.2:77319892-77319911 | MS.gene50024:intron | 50.0% | |
TGGATGGTGAGAATTGGTGG+AGG | - | chr6.2:77323409-77323428 | MS.gene50024:intron | 50.0% | |
! | AAAGTTGGAGTACCTGGAGG+AGG | - | chr6.2:77324671-77324690 | MS.gene50024:CDS | 50.0% |
! | AACCTAGGGTTGTGATTCGG+AGG | + | chr6.2:77319386-77319405 | None:intergenic | 50.0% |
! | GCATTGATCGCGATTTGTCC+GGG | - | chr6.2:77319777-77319796 | MS.gene50024:intron | 50.0% |
! | GGGTTTTCGGAAGGGAATTG+AGG | + | chr6.2:77319332-77319351 | None:intergenic | 50.0% |
! | GTAACCAGTGCAGTTGGTGT+TGG | - | chr6.2:77321634-77321653 | MS.gene50024:intron | 50.0% |
!! | CACCGTTCTTTTGGAAAGGC+TGG | + | chr6.2:77322555-77322574 | None:intergenic | 50.0% |
!! | CGCGCTAGAGGTGTTGAAAT+TGG | - | chr6.2:77324636-77324655 | MS.gene50024:CDS | 50.0% |
!! | CTGGGCACTGAAGCTTAACT+AGG | - | chr6.2:77323676-77323695 | MS.gene50024:intron | 50.0% |
!! | GTCGTGTTTGGTGGTGTTAC+TGG | - | chr6.2:77322943-77322962 | MS.gene50024:intron | 50.0% |
!! | TTGCTGTTCCTTTTCCCTGC+TGG | - | chr6.2:77321826-77321845 | MS.gene50024:intron | 50.0% |
AAAGATGACCCTCTGGCCGT+GGG | + | chr6.2:77322692-77322711 | None:intergenic | 55.0% | |
AGATGCCATGCCTACTCCCA+AGG | + | chr6.2:77321668-77321687 | None:intergenic | 55.0% | |
CAGCAGTGAGCATTAACCCG+GGG | + | chr6.2:77319602-77319621 | None:intergenic | 55.0% | |
CATGCCTACTCCCAAGGCAA+CGG | + | chr6.2:77321662-77321681 | None:intergenic | 55.0% | |
CCACCAACGATTCTACCGAG+TGG | + | chr6.2:77319570-77319589 | None:intergenic | 55.0% | |
CCACTCGGTAGAATCGTTGG+TGG | - | chr6.2:77319567-77319586 | MS.gene50024:intron | 55.0% | |
CCTACTGCACCATACCGATG+AGG | + | chr6.2:77322311-77322330 | None:intergenic | 55.0% | |
CCTCATCGGTATGGTGCAGT+AGG | - | chr6.2:77322308-77322327 | MS.gene50024:CDS | 55.0% | |
CGGAGAAACCGTGTTCTGTG+AGG | + | chr6.2:77319512-77319531 | None:intergenic | 55.0% | |
CTCCTCCGAATCACAACCCT+AGG | - | chr6.2:77319381-77319400 | MS.gene50024:CDS | 55.0% | |
CTGAGCATCAGCCTACTGCT+TGG | - | chr6.2:77321776-77321795 | MS.gene50024:intron | 55.0% | |
GAACACTCCACCAGATGCCA+AGG | - | chr6.2:77322747-77322766 | MS.gene50024:intron | 55.0% | |
GACAGGTATGATCGCGCTAG+AGG | - | chr6.2:77324624-77324643 | MS.gene50024:CDS | 55.0% | |
GCACCTGATTCATACTGGGG+GGG | + | chr6.2:77323729-77323748 | None:intergenic | 55.0% | |
GCAGCAGTGAGCATTAACCC+GGG | + | chr6.2:77319603-77319622 | None:intergenic | 55.0% | |
GGGTTAATGCTCACTGCTGC+TGG | - | chr6.2:77319603-77319622 | MS.gene50024:intron | 55.0% | |
GTACCCCCCCAGTATGAATC+AGG | - | chr6.2:77323723-77323742 | MS.gene50024:intron | 55.0% | |
GTTGGACTATGCTACCCTGC+TGG | - | chr6.2:77323653-77323672 | MS.gene50024:intron | 55.0% | |
TATATGGTTTCCGCGTGGGG+TGG | - | chr6.2:77319942-77319961 | MS.gene50024:intron | 55.0% | |
TTGGGAGTAGGCATGGCATC+TGG | - | chr6.2:77321667-77321686 | MS.gene50024:intron | 55.0% | |
! | ACTATGCTACCCTGCTGGCT+GGG | - | chr6.2:77323658-77323677 | MS.gene50024:intron | 55.0% |
! | CTAGGGTTGTGATTCGGAGG+AGG | + | chr6.2:77319383-77319402 | None:intergenic | 55.0% |
! | TTGGTGGTACACTCTACCCC+GGG | - | chr6.2:77319583-77319602 | MS.gene50024:intron | 55.0% |
!! | GTTGGTGGTACACTCTACCC+CGG | - | chr6.2:77319582-77319601 | MS.gene50024:intron | 55.0% |
!! | TTTGTCGTGGGCATTGGCGT+CGG | - | chr6.2:77319905-77319924 | MS.gene50024:intron | 55.0% |
CAAAGATGACCCTCTGGCCG+TGG | + | chr6.2:77322693-77322712 | None:intergenic | 60.0% | |
CGTTGCCTTGGGAGTAGGCA+TGG | - | chr6.2:77321660-77321679 | MS.gene50024:intron | 60.0% | |
GACTATGCTACCCTGCTGGC+TGG | - | chr6.2:77323657-77323676 | MS.gene50024:intron | 60.0% | |
GAGGTGCATTGTCGGGATGC+GGG | - | chr6.2:77320648-77320667 | MS.gene50024:intron | 60.0% | |
GGCACCAACACCAACTGCAC+TGG | + | chr6.2:77321641-77321660 | None:intergenic | 60.0% | |
GGGGAGTTTGTCGTGGGCAT+TGG | - | chr6.2:77319899-77319918 | MS.gene50024:intron | 60.0% | |
TTCAGGGGCTGGGATTGTCG+CGG | - | chr6.2:77319752-77319771 | MS.gene50024:intron | 60.0% | |
! | GGAGGTGCATTGTCGGGATG+CGG | - | chr6.2:77320647-77320666 | MS.gene50024:intron | 60.0% |
!! | GGTGTTGGTGCCGTTGCCTT+GGG | - | chr6.2:77321649-77321668 | MS.gene50024:intron | 60.0% |
!! | TGGTGTTGGTGCCGTTGCCT+TGG | - | chr6.2:77321648-77321667 | MS.gene50024:intron | 60.0% |
AGCTTCAGTGCCCAGCCAGC+AGG | + | chr6.2:77323671-77323690 | None:intergenic | 65.0% | |
GCTTCAGTGCCCAGCCAGCA+GGG | + | chr6.2:77323670-77323689 | None:intergenic | 65.0% | |
!! | GGTGCCGTTGCCTTGGGAGT+AGG | - | chr6.2:77321655-77321674 | MS.gene50024:intron | 65.0% |
!! | TGGGCATTGGCGTCGGCGTT+TGG | - | chr6.2:77319912-77319931 | MS.gene50024:intron | 65.0% |
!! | TTGGCTGCAAGGGGTGCCCA+CGG | - | chr6.2:77322673-77322692 | MS.gene50024:intron | 65.0% |
!! | AAGGGGTGCCCACGGCCAGA+GGG | - | chr6.2:77322681-77322700 | MS.gene50024:intron | 70.0% |
!! | CAAGGGGTGCCCACGGCCAG+AGG | - | chr6.2:77322680-77322699 | MS.gene50024:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 77319288 | 77324758 | 77319288 | ID=MS.gene50024 |
chr6.2 | mRNA | 77319288 | 77324758 | 77319288 | ID=MS.gene50024.t1;Parent=MS.gene50024 |
chr6.2 | exon | 77324248 | 77324758 | 77324248 | ID=MS.gene50024.t1.exon1;Parent=MS.gene50024.t1 |
chr6.2 | CDS | 77324248 | 77324758 | 77324248 | ID=cds.MS.gene50024.t1;Parent=MS.gene50024.t1 |
chr6.2 | exon | 77323880 | 77324205 | 77323880 | ID=MS.gene50024.t1.exon2;Parent=MS.gene50024.t1 |
chr6.2 | CDS | 77323880 | 77324205 | 77323880 | ID=cds.MS.gene50024.t1;Parent=MS.gene50024.t1 |
chr6.2 | exon | 77321951 | 77322487 | 77321951 | ID=MS.gene50024.t1.exon3;Parent=MS.gene50024.t1 |
chr6.2 | CDS | 77321951 | 77322487 | 77321951 | ID=cds.MS.gene50024.t1;Parent=MS.gene50024.t1 |
chr6.2 | exon | 77321057 | 77321511 | 77321057 | ID=MS.gene50024.t1.exon4;Parent=MS.gene50024.t1 |
chr6.2 | CDS | 77321057 | 77321511 | 77321057 | ID=cds.MS.gene50024.t1;Parent=MS.gene50024.t1 |
chr6.2 | exon | 77320522 | 77320644 | 77320522 | ID=MS.gene50024.t1.exon5;Parent=MS.gene50024.t1 |
chr6.2 | CDS | 77320522 | 77320644 | 77320522 | ID=cds.MS.gene50024.t1;Parent=MS.gene50024.t1 |
chr6.2 | exon | 77320091 | 77320150 | 77320091 | ID=MS.gene50024.t1.exon6;Parent=MS.gene50024.t1 |
chr6.2 | CDS | 77320091 | 77320150 | 77320091 | ID=cds.MS.gene50024.t1;Parent=MS.gene50024.t1 |
chr6.2 | exon | 77319288 | 77319417 | 77319288 | ID=MS.gene50024.t1.exon7;Parent=MS.gene50024.t1 |
chr6.2 | CDS | 77319288 | 77319417 | 77319288 | ID=cds.MS.gene50024.t1;Parent=MS.gene50024.t1 |
Gene Sequence |
Protein sequence |