Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05210.t1 | XP_003620143.1 | 98.1 | 727 | 14 | 0 | 1 | 727 | 1 | 727 | 0.00E+00 | 1412.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05210.t1 | Q9FX21 | 86.3 | 721 | 96 | 1 | 9 | 726 | 14 | 734 | 0.0e+00 | 1251.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05210.t1 | G7KKA7 | 98.1 | 727 | 14 | 0 | 1 | 727 | 1 | 727 | 0.0e+00 | 1412.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05210 | MS.gene056526 | 0.803908 | 2.79E-49 | -1.69E-46 |
| MS.gene05210 | MS.gene50024 | 0.897839 | 9.52E-77 | -1.69E-46 |
| MS.gene05210 | MS.gene56457 | 0.808438 | 3.10E-50 | -1.69E-46 |
| MS.gene05210 | MS.gene93138 | 0.805167 | 1.52E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene05210 | MS.gene66827 | PPI |
| MS.gene05210 | MS.gene45709 | PPI |
| MS.gene05210 | MS.gene50052 | PPI |
| MS.gene05210 | MS.gene064868 | PPI |
| MS.gene05210 | MS.gene057988 | PPI |
| MS.gene003786 | MS.gene05210 | PPI |
| MS.gene05210 | MS.gene54807 | PPI |
| MS.gene05210 | MS.gene014310 | PPI |
| MS.gene001011 | MS.gene05210 | PPI |
| MS.gene05210 | MS.gene014312 | PPI |
| MS.gene005960 | MS.gene05210 | PPI |
| MS.gene93138 | MS.gene05210 | PPI |
| MS.gene05210 | MS.gene057990 | PPI |
| MS.gene50925 | MS.gene05210 | PPI |
| MS.gene05210 | MS.gene056676 | PPI |
| MS.gene05210 | MS.gene069988 | PPI |
| MS.gene05210 | MS.gene50921 | PPI |
| MS.gene05210 | MS.gene029222 | PPI |
| MS.gene05210 | MS.gene34049 | PPI |
| MS.gene037354 | MS.gene05210 | PPI |
| MS.gene05210 | MS.gene039901 | PPI |
| MS.gene05210 | MS.gene039903 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05210.t1 | MTR_6g077750 | 99.175 | 727 | 6 | 0 | 1 | 727 | 1 | 727 | 0.0 | 1481 |
| MS.gene05210.t1 | MTR_6g077750 | 99.038 | 624 | 6 | 0 | 1 | 624 | 1 | 624 | 0.0 | 1260 |
| MS.gene05210.t1 | MTR_1g114250 | 52.374 | 737 | 289 | 9 | 38 | 726 | 23 | 745 | 0.0 | 747 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05210.t1 | AT1G34130 | 86.963 | 721 | 91 | 1 | 9 | 726 | 14 | 734 | 0.0 | 1275 |
| MS.gene05210.t1 | AT5G19690 | 51.279 | 743 | 302 | 8 | 32 | 726 | 22 | 752 | 0.0 | 717 |
| MS.gene05210.t1 | AT5G19690 | 51.247 | 722 | 292 | 8 | 53 | 726 | 2 | 711 | 0.0 | 700 |
Find 176 sgRNAs with CRISPR-Local
Find 444 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCTTTGGGAAAGAAATA+TGG | 0.189447 | 6.4:+52506784 | MS.gene05210:CDS |
| ACGATTGTAGCTTATTTCTT+TGG | 0.219587 | 6.4:+52506771 | MS.gene05210:CDS |
| GTATTGGTGTTGTTGGTTAC+TGG | 0.231153 | 6.4:+52507056 | MS.gene05210:CDS |
| TAATCTGGTTCCTTTATTAC+AGG | 0.239527 | 6.4:-52510478 | None:intergenic |
| AGCTGTCTTATTATCGGTTT+GGG | 0.248895 | 6.4:+52510940 | MS.gene05210:CDS |
| ATAAGACAGTTCAACATCTT+TGG | 0.258164 | 6.4:-52510541 | None:intergenic |
| ACATCATAGCACCGTTCTTT+TGG | 0.260731 | 6.4:-52509600 | None:intergenic |
| GTCGTGTTTGGTGGTGTTAC+TGG | 0.264869 | 6.4:+52509982 | MS.gene05210:CDS |
| GTTATGTCATGGTGGGATTA+TGG | 0.273069 | 6.4:+52509808 | MS.gene05210:CDS |
| GAACTGCAAATCTGAGAAAA+TGG | 0.274412 | 6.4:-52506698 | None:intergenic |
| CGCGCTAGAGGTGTTGAAAT+TGG | 0.280004 | 6.4:+52512468 | MS.gene05210:CDS |
| TGGGCATTGGCGTCGGCTTT+TGG | 0.281966 | 6.4:+52506969 | MS.gene05210:CDS |
| AACACGGTTTCTCCGAGTTT+TGG | 0.286522 | 6.4:+52506574 | MS.gene05210:CDS |
| TGGTGAACATATGGCTTCTA+TGG | 0.287456 | 6.4:+52507181 | MS.gene05210:CDS |
| AGAATTTGACTCGGGTTGTT+AGG | 0.293673 | 6.4:+52509047 | MS.gene05210:CDS |
| AGGTGTTGAAATTGGAAATA+AGG | 0.316515 | 6.4:+52512476 | MS.gene05210:CDS |
| GGAAAAGGAACAGCAATATA+TGG | 0.333152 | 6.4:-52508859 | None:intergenic |
| GGGAAAGAAATATGGGATTC+TGG | 0.334848 | 6.4:+52506792 | MS.gene05210:CDS |
| CGATTGTAGCTTATTTCTTT+GGG | 0.335048 | 6.4:+52506772 | MS.gene05210:CDS |
| GGTACAAGCTGTCTTATTAT+CGG | 0.340894 | 6.4:+52510934 | MS.gene05210:intron |
| GGTTTAATGCTTACTGCTGC+TGG | 0.345874 | 6.4:+52506660 | MS.gene05210:CDS |
| TTATAATTGTATGTATGTTT+TGG | 0.345888 | 6.4:+52507106 | MS.gene05210:CDS |
| GAGGAGGAGTTCTTGTTGTT+TGG | 0.355288 | 6.4:-52506421 | None:intergenic |
| GAAGGGAATTGAGGAGATCT+TGG | 0.358728 | 6.4:-52506377 | None:intergenic |
| TGCTTCAAAAGGCTCTTCTA+AGG | 0.359146 | 6.4:+52509114 | MS.gene05210:CDS |
| AAGCTGTCTTATTATCGGTT+TGG | 0.359634 | 6.4:+52510939 | MS.gene05210:CDS |
| TGAAATATGGATCGAATTCA+TGG | 0.363606 | 6.4:-52506524 | None:intergenic |
| TCAGAGACAGAAGCAATAAT+TGG | 0.363976 | 6.4:-52508797 | None:intergenic |
| TGCTATGTGTGTATTGTTCC+AGG | 0.366625 | 6.4:-52509881 | None:intergenic |
| CAAACTGTACAGAGTGGTTC+TGG | 0.367344 | 6.4:+52509079 | MS.gene05210:CDS |
| TGCATTGATCGCGATTTGTC+CGG | 0.375691 | 6.4:+52506833 | MS.gene05210:CDS |
| TTTCTTTGGGAAAGAAATAT+GGG | 0.375761 | 6.4:+52506785 | MS.gene05210:CDS |
| GCTATGCAGATTCGGTTTGT+TGG | 0.376291 | 6.4:+52507140 | MS.gene05210:CDS |
| GACTATGTGTTAGTCGTGTT+TGG | 0.381068 | 6.4:+52509970 | MS.gene05210:CDS |
| CTATGCAGATTCGGTTTGTT+GGG | 0.381588 | 6.4:+52507141 | MS.gene05210:CDS |
| GGAGAATATCGTGTAGATAA+AGG | 0.383279 | 6.4:+52510511 | MS.gene05210:CDS |
| TCTCCATTGACAAGGTAATC+TGG | 0.383736 | 6.4:-52510493 | None:intergenic |
| GTTCGTGAAAGCGGTGAATA+CGG | 0.384861 | 6.4:+52506935 | MS.gene05210:CDS |
| GGGGAGCTGACAACAGAATA+TGG | 0.387972 | 6.4:+52510960 | MS.gene05210:CDS |
| TTCGTGAAAGCGGTGAATAC+GGG | 0.389496 | 6.4:+52506936 | MS.gene05210:CDS |
| CAGAACCACTCTGTACAGTT+TGG | 0.397760 | 6.4:-52509078 | None:intergenic |
| AGGCATTTACTACTCAGAAT+TGG | 0.402924 | 6.4:+52512523 | MS.gene05210:CDS |
| TATTGGTGTTGTTGGTTACT+GGG | 0.405067 | 6.4:+52507057 | MS.gene05210:CDS |
| ATTGGTTCGATTCCGATTCA+TGG | 0.405627 | 6.4:+52506598 | MS.gene05210:CDS |
| GCTTTATGTATTGGTGTTGT+TGG | 0.405793 | 6.4:+52507049 | MS.gene05210:CDS |
| TGGAAATAAGGACATAAAGT+TGG | 0.417826 | 6.4:+52512488 | MS.gene05210:CDS |
| TGTTGCTTGCTATGCAGATT+CGG | 0.420054 | 6.4:+52507132 | MS.gene05210:CDS |
| TGTTCAATCTGGTGAACATA+TGG | 0.422142 | 6.4:+52507172 | MS.gene05210:CDS |
| ATTATCGTGAGGCTTACTTT+TGG | 0.425418 | 6.4:+52509755 | MS.gene05210:CDS |
| GAATTTGACTCGGGTTGTTA+GGG | 0.426599 | 6.4:+52509048 | MS.gene05210:CDS |
| GTGGTGCGGTAGTTGAAATA+TGG | 0.430387 | 6.4:-52506537 | None:intergenic |
| GGTGTTGGTGCCGTTGCCTT+GGG | 0.430966 | 6.4:+52508689 | MS.gene05210:CDS |
| CTCAATTGTCTTGGCTGCAA+GGG | 0.435929 | 6.4:+52509702 | MS.gene05210:CDS |
| GATATGCTATTCACTGTACT+TGG | 0.436601 | 6.4:+52509653 | MS.gene05210:CDS |
| TGGTGTTGGTGCCGTTGCCT+TGG | 0.436713 | 6.4:+52508688 | MS.gene05210:CDS |
| AATAGAGGCCAGCAGGGAAA+AGG | 0.444820 | 6.4:-52508874 | None:intergenic |
| CCTCAATTGTCTTGGCTGCA+AGG | 0.452743 | 6.4:+52509701 | MS.gene05210:CDS |
| CAAAGATGACCCTCTGGCCG+TGG | 0.453430 | 6.4:-52509729 | None:intergenic |
| TTTGGTGCCGCTTTATGTAT+TGG | 0.453549 | 6.4:+52507040 | MS.gene05210:CDS |
| GGGGAGTTTGTCGTGGGCAT+TGG | 0.454776 | 6.4:+52506956 | MS.gene05210:CDS |
| CATGACATAACCTTGGCATC+TGG | 0.455319 | 6.4:-52509796 | None:intergenic |
| CTCATCTCCCTCAATTGTCT+TGG | 0.455502 | 6.4:+52509693 | MS.gene05210:CDS |
| GGGTTTCAACATGTTCAATC+TGG | 0.457870 | 6.4:+52507161 | MS.gene05210:CDS |
| TTGGGAGTAGGCATGGCATC+TGG | 0.460733 | 6.4:+52508707 | MS.gene05210:CDS |
| GGACATAAAGTTGGAGTACC+TGG | 0.469382 | 6.4:+52512497 | MS.gene05210:CDS |
| CAAGGGGTGCCCACGGCCAG+AGG | 0.473774 | 6.4:+52509719 | MS.gene05210:CDS |
| GAAATATGGGATTCTGGCGC+AGG | 0.475322 | 6.4:+52506798 | MS.gene05210:CDS |
| AAAGGAACTGGTGCTTCAAA+AGG | 0.479203 | 6.4:+52509103 | MS.gene05210:CDS |
| ACAATCTTCATAGTTATGTA+TGG | 0.489530 | 6.4:+52508923 | MS.gene05210:CDS |
| GTACAGAGTGGTTCTGGTAA+AGG | 0.489773 | 6.4:+52509085 | MS.gene05210:CDS |
| AGTGGTTCTGGTAAAGGAAC+TGG | 0.493016 | 6.4:+52509091 | MS.gene05210:CDS |
| TTTGTCGTGGGCATTGGCGT+CGG | 0.498515 | 6.4:+52506962 | MS.gene05210:CDS |
| TTTCTATGGATGGTGAGAAT+TGG | 0.498736 | 6.4:+52510442 | MS.gene05210:CDS |
| GAACCAGATTACCTTGTCAA+TGG | 0.500749 | 6.4:+52510490 | MS.gene05210:CDS |
| TTAAACCTAGGGTTGTGATT+CGG | 0.503699 | 6.4:-52506443 | None:intergenic |
| TATATATCGAGATCTGTTGC+TGG | 0.504674 | 6.4:+52506858 | MS.gene05210:CDS |
| AGATCTTGGATTGTTGATGA+TGG | 0.507836 | 6.4:-52506363 | None:intergenic |
| CTATGGATGGTGAGAATTGG+TGG | 0.510223 | 6.4:+52510445 | MS.gene05210:CDS |
| TGGATCGAATTCATGGATCA+TGG | 0.511512 | 6.4:-52506517 | None:intergenic |
| GGTGCCGTTGCCTTGGGAGT+AGG | 0.512371 | 6.4:+52508695 | MS.gene05210:CDS |
| GCATTGATCGCGATTTGTCC+GGG | 0.515574 | 6.4:+52506834 | MS.gene05210:CDS |
| ACAGAATATGGCAAACCACC+TGG | 0.518951 | 6.4:+52510972 | MS.gene05210:CDS |
| TGGTTATCAAATCACTGCCA+TGG | 0.520717 | 6.4:+52509828 | MS.gene05210:CDS |
| ATATGATCCTTAGCATATGT+TGG | 0.521428 | 6.4:-52508773 | None:intergenic |
| CCACTCGGTCGAATCGTTGG+CGG | 0.524240 | 6.4:+52506624 | MS.gene05210:CDS |
| CTTGCAGCCAAGACAATTGA+GGG | 0.524883 | 6.4:-52509700 | None:intergenic |
| GAGTAGTAAATGCCTCCTCC+AGG | 0.526114 | 6.4:-52512515 | None:intergenic |
| CGTTGCCTTGGGAGTAGGCA+TGG | 0.527437 | 6.4:+52508700 | MS.gene05210:CDS |
| CCTTGCAGCCAAGACAATTG+AGG | 0.529935 | 6.4:-52509701 | None:intergenic |
| CTGAGCATCAGCCTACTGCT+TGG | 0.530035 | 6.4:+52508816 | MS.gene05210:CDS |
| TTTGTCTAGATTTCTATGGA+TGG | 0.533187 | 6.4:+52510432 | MS.gene05210:intron |
| CTACTGTGAAGAATTTGACT+CGG | 0.534921 | 6.4:+52509038 | MS.gene05210:CDS |
| GGCACCAACACCAACTGCAC+TGG | 0.538667 | 6.4:-52508678 | None:intergenic |
| GCTTGATCCAACATATGCTA+AGG | 0.540492 | 6.4:+52508766 | MS.gene05210:CDS |
| GAATAAAACCTTCCGGTCCA+CGG | 0.542526 | 6.4:-52508740 | None:intergenic |
| GATTGGGTAAAGCATTTACT+CGG | 0.544089 | 6.4:+52508614 | MS.gene05210:CDS |
| TGAATACGGGGAGTTTGTCG+TGG | 0.544204 | 6.4:+52506949 | MS.gene05210:CDS |
| TTGGCTGCAAGGGGTGCCCA+CGG | 0.546061 | 6.4:+52509712 | MS.gene05210:CDS |
| GCGTGCAATGTCATCTTATG+AGG | 0.548763 | 6.4:+52509912 | MS.gene05210:CDS |
| CGAGGATGTAGATTAAACCT+AGG | 0.554154 | 6.4:-52506455 | None:intergenic |
| GACATAACCTTGGCATCTGG+TGG | 0.555183 | 6.4:-52509793 | None:intergenic |
| ACCGAGTGGATACCATGAAT+CGG | 0.557843 | 6.4:-52506610 | None:intergenic |
| AATACACACATAGCAACTGT+TGG | 0.557921 | 6.4:+52509889 | MS.gene05210:CDS |
| GCACTAATGAGGCATACAGC+AGG | 0.559391 | 6.4:-52509001 | None:intergenic |
| AAGCAAAGAATAAAACCTTC+CGG | 0.561162 | 6.4:-52508747 | None:intergenic |
| GGTTATCAAATCACTGCCAT+GGG | 0.562186 | 6.4:+52509829 | MS.gene05210:CDS |
| TCAATTGTCTTGGCTGCAAG+GGG | 0.563819 | 6.4:+52509703 | MS.gene05210:CDS |
| AATCGTCAAAGATGACCCTC+TGG | 0.564738 | 6.4:-52509735 | None:intergenic |
| CATGCCTACTCCCAAGGCAA+CGG | 0.564768 | 6.4:-52508699 | None:intergenic |
| AACAACACCAATACATAAAG+CGG | 0.565056 | 6.4:-52507047 | None:intergenic |
| CACTAATGAGGCATACAGCA+GGG | 0.568869 | 6.4:-52509000 | None:intergenic |
| AATGTCATCTTATGAGGATG+AGG | 0.572863 | 6.4:+52509918 | MS.gene05210:CDS |
| ATACACACATAGCAACTGTT+GGG | 0.577937 | 6.4:+52509890 | MS.gene05210:CDS |
| CTAGGGTTGTGATTCGGAGG+AGG | 0.579023 | 6.4:-52506437 | None:intergenic |
| TATATGGAAATCAAACATGA+AGG | 0.579181 | 6.4:-52508843 | None:intergenic |
| TATCCACTCGGTCGAATCGT+TGG | 0.580688 | 6.4:+52506621 | MS.gene05210:CDS |
| CTCCTCCGAATCACAACCCT+AGG | 0.582391 | 6.4:+52506438 | MS.gene05210:CDS |
| ATCACTGTAACCAGTGCAGT+TGG | 0.585794 | 6.4:+52508668 | MS.gene05210:CDS |
| GTAACCAGTGCAGTTGGTGT+TGG | 0.586031 | 6.4:+52508674 | MS.gene05210:CDS |
| TATATGGTTTCGGCGTGGGG+TGG | 0.590584 | 6.4:+52506999 | MS.gene05210:CDS |
| TCGTGAAAGCGGTGAATACG+GGG | 0.591245 | 6.4:+52506937 | MS.gene05210:CDS |
| ATCCCACCATGACATAACCT+TGG | 0.591445 | 6.4:-52509803 | None:intergenic |
| TATGTGTTAGTCGTGTTTGG+TGG | 0.595667 | 6.4:+52509973 | MS.gene05210:CDS |
| TTACTTATTAATATCGTCAG+AGG | 0.596438 | 6.4:-52510010 | None:intergenic |
| TACTGTGAAGAATTTGACTC+GGG | 0.596916 | 6.4:+52509039 | MS.gene05210:CDS |
| AAAGTTGGAGTACCTGGAGG+AGG | 0.598910 | 6.4:+52512503 | MS.gene05210:CDS |
| CATCTTTGACGATTATCGTG+AGG | 0.598920 | 6.4:+52509744 | MS.gene05210:CDS |
| ACTCTTTACCTCACAGAACA+CGG | 0.599049 | 6.4:+52506558 | MS.gene05210:CDS |
| TGCCAAGGTTATGTCATGGT+GGG | 0.600958 | 6.4:+52509801 | MS.gene05210:CDS |
| AACCTAGGGTTGTGATTCGG+AGG | 0.602304 | 6.4:-52506440 | None:intergenic |
| ATCGAACCAATTCCAAAACT+CGG | 0.603155 | 6.4:-52506586 | None:intergenic |
| CACGATATTCTCCATTGACA+AGG | 0.603724 | 6.4:-52510501 | None:intergenic |
| GGTTACATATCACCGTGGAC+CGG | 0.604522 | 6.4:+52508728 | MS.gene05210:CDS |
| AATAACTGTTCTGTTTCCCA+TGG | 0.605412 | 6.4:-52509845 | None:intergenic |
| ATACCGCAATAGCACTAATG+AGG | 0.605771 | 6.4:-52509012 | None:intergenic |
| GACAGGTATGATCGCGCTAG+AGG | 0.607213 | 6.4:+52512456 | MS.gene05210:intron |
| ATATGCTATTCACTGTACTT+GGG | 0.608269 | 6.4:+52509654 | MS.gene05210:CDS |
| AAAGATGACCCTCTGGCCGT+GGG | 0.608676 | 6.4:-52509728 | None:intergenic |
| AAGGGGTGCCCACGGCCAGA+GGG | 0.608944 | 6.4:+52509720 | MS.gene05210:CDS |
| GAGGATGTAGATTAAACCTA+GGG | 0.612813 | 6.4:-52506454 | None:intergenic |
| TTACTGGGAGATATTCATTG+AGG | 0.613059 | 6.4:+52507072 | MS.gene05210:CDS |
| GGTGAACATATGGCTTCTAT+GGG | 0.613369 | 6.4:+52507182 | MS.gene05210:CDS |
| TCCCAGCCTTTCCAAAAGAA+CGG | 0.613563 | 6.4:+52509589 | MS.gene05210:CDS |
| ATACATAACTATGAAGATTG+TGG | 0.615117 | 6.4:-52508921 | None:intergenic |
| GAACACTCCACCAGATGCCA+AGG | 0.615549 | 6.4:+52509786 | MS.gene05210:CDS |
| ACATATCACCGTGGACCGGA+AGG | 0.615844 | 6.4:+52508732 | MS.gene05210:CDS |
| AGATGCCATGCCTACTCCCA+AGG | 0.616613 | 6.4:-52508705 | None:intergenic |
| GCAGCAGTAAGCATTAAACC+AGG | 0.618048 | 6.4:-52506657 | None:intergenic |
| CAGAATATGGCAAACCACCT+GGG | 0.619228 | 6.4:+52510973 | MS.gene05210:CDS |
| GAATACGGGGAGTTTGTCGT+GGG | 0.621466 | 6.4:+52506950 | MS.gene05210:CDS |
| GCTGGATCTTATGATAATGA+AGG | 0.626564 | 6.4:+52506876 | MS.gene05210:CDS |
| ATCTTATGATAATGAAGGCG+TGG | 0.626662 | 6.4:+52506881 | MS.gene05210:CDS |
| GTTGGCGGTACACTCTACCC+TGG | 0.628803 | 6.4:+52506639 | MS.gene05210:CDS |
| ATGCCTCATTAGTGCTATTG+CGG | 0.629582 | 6.4:+52509009 | MS.gene05210:CDS |
| AAATATGGGATTCTGGCGCA+GGG | 0.636532 | 6.4:+52506799 | MS.gene05210:CDS |
| CAGATGCCAAGGTTATGTCA+TGG | 0.646526 | 6.4:+52509797 | MS.gene05210:CDS |
| ATGAAGGACGACCAAGCAGT+AGG | 0.646628 | 6.4:-52508827 | None:intergenic |
| TTATTGTTGACAATAACACC+TGG | 0.647406 | 6.4:+52509863 | MS.gene05210:CDS |
| GGATAAAGATCTTACCCAGG+TGG | 0.654248 | 6.4:-52510987 | None:intergenic |
| ACAGATCTCGATATATAACC+CGG | 0.655718 | 6.4:-52506852 | None:intergenic |
| GCTGTCTTATTATCGGTTTG+GGG | 0.658859 | 6.4:+52510941 | MS.gene05210:CDS |
| ACTAATGAGGCATACAGCAG+GGG | 0.659990 | 6.4:-52508999 | None:intergenic |
| ATGCCAAGGTTATGTCATGG+TGG | 0.660270 | 6.4:+52509800 | MS.gene05210:CDS |
| TCCGATTCATGGTATCCACT+CGG | 0.661729 | 6.4:+52506609 | MS.gene05210:CDS |
| TTCTGGCGCAGGGATTGTCG+CGG | 0.664475 | 6.4:+52506809 | MS.gene05210:CDS |
| CAGCAGTAAGCATTAAACCA+GGG | 0.670434 | 6.4:-52506656 | None:intergenic |
| CGGAGAAACCGTGTTCTGTG+AGG | 0.683422 | 6.4:-52506566 | None:intergenic |
| TGGATGGTGAGAATTGGTGG+AGG | 0.689233 | 6.4:+52510448 | MS.gene05210:CDS |
| CCGCCAACGATTCGACCGAG+TGG | 0.697675 | 6.4:-52506624 | None:intergenic |
| GGATCATGGATTCATAACGA+AGG | 0.708972 | 6.4:-52506503 | None:intergenic |
| AAAGTCCAAACTGTACAGAG+TGG | 0.729222 | 6.4:+52509073 | MS.gene05210:CDS |
| AGAGACGAGTGATGAATGCG+AGG | 0.735199 | 6.4:-52506473 | None:intergenic |
| CTGTGAGGTAAAGAGTGGTG+CGG | 0.738326 | 6.4:-52506551 | None:intergenic |
| CATAAAGTTGGAGTACCTGG+AGG | 0.742195 | 6.4:+52512500 | MS.gene05210:CDS |
| GTGTTCTGTGAGGTAAAGAG+TGG | 0.767112 | 6.4:-52506556 | None:intergenic |
| CATCTGGTTACATATCACCG+TGG | 0.790679 | 6.4:+52508723 | MS.gene05210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATGCAATTTAAAAAAT+GGG | - | chr6.4:52507430-52507449 | None:intergenic | 10.0% |
| !! | TTAAAATGCAATTTAAAAAA+TGG | - | chr6.4:52507431-52507450 | None:intergenic | 10.0% |
| !!! | TTAAATTTATTTGACTTTAA+GGG | + | chr6.4:52507344-52507363 | MS.gene05210:intron | 10.0% |
| !!! | TTAAATTTATTTGAGTTTAA+TGG | + | chr6.4:52507666-52507685 | MS.gene05210:intron | 10.0% |
| !!! | TTTAAAATGCAAATTTAAAA+CGG | - | chr6.4:52507749-52507768 | None:intergenic | 10.0% |
| !! | ATGAAAAATCAATCTTTAAA+GGG | - | chr6.4:52508137-52508156 | None:intergenic | 15.0% |
| !! | TAAAACATTTCATAAGATTT+AGG | + | chr6.4:52511685-52511704 | MS.gene05210:intron | 15.0% |
| !! | TAATCTTCAATTTAAAAAAC+TGG | - | chr6.4:52512065-52512084 | None:intergenic | 15.0% |
| !! | TATGAAAAATCAATCTTTAA+AGG | - | chr6.4:52508138-52508157 | None:intergenic | 15.0% |
| !!! | CTTAAATTTATTTGACTTTA+AGG | + | chr6.4:52507343-52507362 | MS.gene05210:intron | 15.0% |
| !!! | TATAATTGTATGTATGTTTT+GGG | + | chr6.4:52507107-52507126 | MS.gene05210:CDS | 15.0% |
| !!! | TGGTTTTAAAAAAAAAACAA+GGG | + | chr6.4:52511325-52511344 | MS.gene05210:intron | 15.0% |
| !!! | TTAAAATGCAAATTTAAAAC+GGG | - | chr6.4:52507748-52507767 | None:intergenic | 15.0% |
| !!! | TTATAATTGTATGTATGTTT+TGG | + | chr6.4:52507106-52507125 | MS.gene05210:CDS | 15.0% |
| !!! | TTGAACAAATATATTTTCTT+AGG | + | chr6.4:52508401-52508420 | MS.gene05210:intron | 15.0% |
| !!! | TTGGTTTTAAAAAAAAAACA+AGG | + | chr6.4:52511324-52511343 | MS.gene05210:intron | 15.0% |
| !!! | TTGTTTTTTTTTTAAAACCA+AGG | - | chr6.4:52511325-52511344 | None:intergenic | 15.0% |
| !!! | TTTCATAATCTCAATTTTTT+TGG | + | chr6.4:52508151-52508170 | MS.gene05210:intron | 15.0% |
| !!! | TTTGAATTTTGATATTATGT+TGG | + | chr6.4:52511600-52511619 | MS.gene05210:intron | 15.0% |
| !! | AATTTAAACTTGAACTTCAA+TGG | - | chr6.4:52508059-52508078 | None:intergenic | 20.0% |
| !! | GGAATAACTATTTAAAAAGT+TGG | + | chr6.4:52510674-52510693 | MS.gene05210:intron | 20.0% |
| !! | TAAGAATCTTATTAAAATGC+AGG | - | chr6.4:52510409-52510428 | None:intergenic | 20.0% |
| !! | TACAAATATGCTTTCATAAA+TGG | - | chr6.4:52507825-52507844 | None:intergenic | 20.0% |
| !! | TGTATTATTATTTACATGCA+GGG | + | chr6.4:52509553-52509572 | MS.gene05210:intron | 20.0% |
| !! | TTAAAAAACTGGTAACATTT+GGG | - | chr6.4:52512054-52512073 | None:intergenic | 20.0% |
| !! | TTTAAAAAACTGGTAACATT+TGG | - | chr6.4:52512055-52512074 | None:intergenic | 20.0% |
| !!! | AAATCAACTAAAGTATTAGA+CGG | - | chr6.4:52507460-52507479 | None:intergenic | 20.0% |
| !!! | AACAAATATATTTTCTTAGG+TGG | + | chr6.4:52508404-52508423 | MS.gene05210:intron | 20.0% |
| !!! | AATTATCAGTTCTTTTCTTT+AGG | + | chr6.4:52511548-52511567 | MS.gene05210:intron | 20.0% |
| !!! | AATTGAAGATTAGTTTATGA+TGG | + | chr6.4:52512073-52512092 | MS.gene05210:intron | 20.0% |
| !!! | AATTTATTTGAGTTTAATGG+AGG | + | chr6.4:52507669-52507688 | MS.gene05210:intron | 20.0% |
| !!! | AATTTTTGTCTAGATTTCTA+TGG | + | chr6.4:52510428-52510447 | MS.gene05210:intron | 20.0% |
| !!! | ACAAATATATTTTCTTAGGT+GGG | + | chr6.4:52508405-52508424 | MS.gene05210:intron | 20.0% |
| !!! | AGTTTTCATTTTGATTATAG+TGG | + | chr6.4:52509511-52509530 | MS.gene05210:intron | 20.0% |
| !!! | ATTTGCATTTTAAAGATAAC+CGG | + | chr6.4:52507755-52507774 | MS.gene05210:intron | 20.0% |
| !!! | GTATGTAGAATTATTTTACA+CGG | + | chr6.4:52508022-52508041 | MS.gene05210:intron | 20.0% |
| !!! | TGGTTATTTTTATATGGTTT+CGG | + | chr6.4:52506989-52507008 | MS.gene05210:CDS | 20.0% |
| !!! | TTCTTTAAGCTTGATATTTT+GGG | + | chr6.4:52508335-52508354 | MS.gene05210:intron | 20.0% |
| !!! | TTGCGGTTATTTTTATATTA+CGG | + | chr6.4:52507948-52507967 | MS.gene05210:intron | 20.0% |
| !!! | TTTCGTAATGTTTTGAATTT+TGG | + | chr6.4:52511635-52511654 | MS.gene05210:intron | 20.0% |
| !!! | TTTCTTTAAGCTTGATATTT+TGG | + | chr6.4:52508334-52508353 | MS.gene05210:intron | 20.0% |
| ! | AAAATTGTGTTTAGTTGATC+AGG | + | chr6.4:52508247-52508266 | MS.gene05210:intron | 25.0% |
| ! | AAATATTACCGTAAAATTGC+TGG | + | chr6.4:52507481-52507500 | MS.gene05210:intron | 25.0% |
| ! | AACATTTCATAAGATTTAGG+TGG | + | chr6.4:52511688-52511707 | MS.gene05210:intron | 25.0% |
| ! | ACAATCTTCATAGTTATGTA+TGG | + | chr6.4:52508923-52508942 | MS.gene05210:CDS | 25.0% |
| ! | AGATCTTTATCCTTTACTAT+TGG | + | chr6.4:52510998-52511017 | MS.gene05210:intron | 25.0% |
| ! | AGTTATTCCACAAATTTATC+TGG | - | chr6.4:52510663-52510682 | None:intergenic | 25.0% |
| ! | AGTTTATTCATCAAAGAATG+AGG | + | chr6.4:52512110-52512129 | MS.gene05210:intron | 25.0% |
| ! | ATACATAACTATGAAGATTG+TGG | - | chr6.4:52508924-52508943 | None:intergenic | 25.0% |
| ! | ATCTTTATCCTTTACTATTG+GGG | + | chr6.4:52511000-52511019 | MS.gene05210:intron | 25.0% |
| ! | CAAATGCCAAGATAAATTAA+TGG | - | chr6.4:52510582-52510601 | None:intergenic | 25.0% |
| ! | GATCTTTATCCTTTACTATT+GGG | + | chr6.4:52510999-52511018 | MS.gene05210:intron | 25.0% |
| ! | GCATGTTAAAATTTCAATCT+TGG | + | chr6.4:52512297-52512316 | MS.gene05210:intron | 25.0% |
| ! | GCTAGATGCTAATTTAAATT+TGG | + | chr6.4:52508278-52508297 | MS.gene05210:intron | 25.0% |
| ! | GTGCAATATATAACTTAAGA+TGG | - | chr6.4:52510038-52510057 | None:intergenic | 25.0% |
| ! | GTGTATTATTATTTACATGC+AGG | + | chr6.4:52509552-52509571 | MS.gene05210:intron | 25.0% |
| ! | TAAAGAAACGAGTAAAAACT+CGG | - | chr6.4:52510366-52510385 | None:intergenic | 25.0% |
| ! | TAGTAGCATATGAATAAATG+TGG | - | chr6.4:52509225-52509244 | None:intergenic | 25.0% |
| ! | TATATGGAAATCAAACATGA+AGG | - | chr6.4:52508846-52508865 | None:intergenic | 25.0% |
| ! | TATCTAATATAAAGCAACGA+CGG | - | chr6.4:52511494-52511513 | None:intergenic | 25.0% |
| ! | TCCTAAAAGTTATGAAATAG+CGG | + | chr6.4:52511820-52511839 | MS.gene05210:intron | 25.0% |
| ! | TCGTATAAGTATTACTGAAA+AGG | - | chr6.4:52509283-52509302 | None:intergenic | 25.0% |
| ! | TTACTTATTAATATCGTCAG+AGG | - | chr6.4:52510013-52510032 | None:intergenic | 25.0% |
| ! | TTAGCACCATTAATTTATCT+TGG | + | chr6.4:52510573-52510592 | MS.gene05210:intron | 25.0% |
| ! | TTATATTACGGTTACAAAGT+TGG | + | chr6.4:52507960-52507979 | MS.gene05210:intron | 25.0% |
| ! | TTCTTAATGTCGTAGAAAAT+TGG | + | chr6.4:52510607-52510626 | MS.gene05210:intron | 25.0% |
| ! | TTTCACGTAAAATGAAATAG+CGG | - | chr6.4:52511290-52511309 | None:intergenic | 25.0% |
| !! | AATGAGAATCAAGTATTTTG+CGG | + | chr6.4:52507931-52507950 | MS.gene05210:intron | 25.0% |
| !! | AATTGTTTCAAGCATTTTTG+AGG | + | chr6.4:52508645-52508664 | MS.gene05210:CDS | 25.0% |
| !! | AATTTATTTGACTTTAAGGG+AGG | + | chr6.4:52507347-52507366 | MS.gene05210:intron | 25.0% |
| !! | ATGAGGTTTTCAAAATGTAA+AGG | + | chr6.4:52512409-52512428 | MS.gene05210:intron | 25.0% |
| !! | ATTTAAAAAATGGGCTTATG+TGG | - | chr6.4:52507421-52507440 | None:intergenic | 25.0% |
| !! | ATTTCTTTGGGAAAGAAATA+TGG | + | chr6.4:52506784-52506803 | MS.gene05210:CDS | 25.0% |
| !! | GTTTAAGTTAAGAAGCAATT+GGG | + | chr6.4:52507877-52507896 | MS.gene05210:intron | 25.0% |
| !! | TGTTTAAGTTAAGAAGCAAT+TGG | + | chr6.4:52507876-52507895 | MS.gene05210:intron | 25.0% |
| !! | TTAAATTAGCATCTAGCTTA+CGG | - | chr6.4:52508275-52508294 | None:intergenic | 25.0% |
| !! | TTTCTTTGGGAAAGAAATAT+GGG | + | chr6.4:52506785-52506804 | MS.gene05210:CDS | 25.0% |
| !!! | AATTACAAAGTTTGTTGTTG+TGG | + | chr6.4:52507642-52507661 | MS.gene05210:intron | 25.0% |
| !!! | ACATTTTGAAAACCTCATTA+AGG | - | chr6.4:52512407-52512426 | None:intergenic | 25.0% |
| !!! | GATATTTTGGGTTTTACATT+TGG | + | chr6.4:52508347-52508366 | MS.gene05210:intron | 25.0% |
| !!! | GGCTTTTGGTTATTTTTATA+TGG | + | chr6.4:52506983-52507002 | MS.gene05210:CDS | 25.0% |
| !!! | TTGTTTGGTTTTGAGTTTTA+GGG | - | chr6.4:52506409-52506428 | None:intergenic | 25.0% |
| AACAACACCAATACATAAAG+CGG | - | chr6.4:52507050-52507069 | None:intergenic | 30.0% | |
| AACGTTTGTGATTAACTGAT+GGG | + | chr6.4:52512008-52512027 | MS.gene05210:intron | 30.0% | |
| AAGCAAAGAATAAAACCTTC+CGG | - | chr6.4:52508750-52508769 | None:intergenic | 30.0% | |
| AATCCAAAAAGAAAAACACC+TGG | - | chr6.4:52508598-52508617 | None:intergenic | 30.0% | |
| AATGCATTTCTCGCAAAAAA+CGG | + | chr6.4:52511438-52511457 | MS.gene05210:intron | 30.0% | |
| AATGTTGTAATTACCCTCAT+CGG | + | chr6.4:52509334-52509353 | MS.gene05210:intron | 30.0% | |
| AGAGAGAAACTGAAGTTATT+AGG | - | chr6.4:52511374-52511393 | None:intergenic | 30.0% | |
| ATAAGACAGTTCAACATCTT+TGG | - | chr6.4:52510544-52510563 | None:intergenic | 30.0% | |
| ATATGATCCTTAGCATATGT+TGG | - | chr6.4:52508776-52508795 | None:intergenic | 30.0% | |
| ATATGCTATTCACTGTACTT+GGG | + | chr6.4:52509654-52509673 | MS.gene05210:CDS | 30.0% | |
| ATATTGCAAACCAATTGTCA+TGG | - | chr6.4:52509404-52509423 | None:intergenic | 30.0% | |
| ATTCCAACATAACATAGCAT+TGG | - | chr6.4:52511531-52511550 | None:intergenic | 30.0% | |
| ATTCCCGTTATTCAAAACAA+TGG | + | chr6.4:52512174-52512193 | MS.gene05210:intron | 30.0% | |
| CATTTGACCAGATAAATTTG+TGG | + | chr6.4:52510653-52510672 | MS.gene05210:intron | 30.0% | |
| CTTCCTTCTTTCATTCTTTA+CGG | + | chr6.4:52511392-52511411 | MS.gene05210:intron | 30.0% | |
| GACGTTAATAAACCTTAATG+AGG | + | chr6.4:52512392-52512411 | MS.gene05210:intron | 30.0% | |
| GAGAGAAACTGAAGTTATTA+GGG | - | chr6.4:52511373-52511392 | None:intergenic | 30.0% | |
| GCAAAATACTTGATTCTCAT+TGG | - | chr6.4:52507932-52507951 | None:intergenic | 30.0% | |
| GCAATACGATGAATTATCAT+TGG | - | chr6.4:52507717-52507736 | None:intergenic | 30.0% | |
| GCATACATAGTAGTTAATAG+CGG | - | chr6.4:52511907-52511926 | None:intergenic | 30.0% | |
| TAACGTTTGTGATTAACTGA+TGG | + | chr6.4:52512007-52512026 | MS.gene05210:intron | 30.0% | |
| TACATTTATTAATGCTGTCC+TGG | + | chr6.4:52510321-52510340 | MS.gene05210:intron | 30.0% | |
| TACGAAAGATGAATTAGTGT+TGG | + | chr6.4:52509298-52509317 | MS.gene05210:intron | 30.0% | |
| TCTTATTCAATGCATTCGAA+AGG | - | chr6.4:52512349-52512368 | None:intergenic | 30.0% | |
| TGAAAATACAAGATTCTCCT+TGG | + | chr6.4:52511305-52511324 | MS.gene05210:intron | 30.0% | |
| TGAAATATGGATCGAATTCA+TGG | - | chr6.4:52506527-52506546 | None:intergenic | 30.0% | |
| TGGAAATAAGGACATAAAGT+TGG | + | chr6.4:52512488-52512507 | MS.gene05210:CDS | 30.0% | |
| TTATTGTTGACAATAACACC+TGG | + | chr6.4:52509863-52509882 | MS.gene05210:CDS | 30.0% | |
| TTCCCGTTATTCAAAACAAT+GGG | + | chr6.4:52512175-52512194 | MS.gene05210:intron | 30.0% | |
| TTTCCAATGCTATGTTATGT+TGG | + | chr6.4:52511525-52511544 | MS.gene05210:intron | 30.0% | |
| TTTGTCTAGATTTCTATGGA+TGG | + | chr6.4:52510432-52510451 | MS.gene05210:intron | 30.0% | |
| ! | ACAAAATGCCAGCAATTTTA+CGG | - | chr6.4:52507492-52507511 | None:intergenic | 30.0% |
| ! | ACGATTGTAGCTTATTTCTT+TGG | + | chr6.4:52506771-52506790 | MS.gene05210:CDS | 30.0% |
| ! | AGGAGTTTTTCCTGTAATAA+AGG | + | chr6.4:52510468-52510487 | MS.gene05210:CDS | 30.0% |
| ! | AGGTGTTTTTCTTTTTGGAT+TGG | + | chr6.4:52508597-52508616 | MS.gene05210:intron | 30.0% |
| ! | CAACATTTTTCCATGACAAT+TGG | + | chr6.4:52509391-52509410 | MS.gene05210:intron | 30.0% |
| ! | CGATTGTAGCTTATTTCTTT+GGG | + | chr6.4:52506772-52506791 | MS.gene05210:CDS | 30.0% |
| ! | GGTGTTTTTCTTTTTGGATT+GGG | + | chr6.4:52508598-52508617 | MS.gene05210:intron | 30.0% |
| ! | TAATCTGGTTCCTTTATTAC+AGG | - | chr6.4:52510481-52510500 | None:intergenic | 30.0% |
| ! | TCTTTACCTTTTTCCTTGAT+AGG | + | chr6.4:52510913-52510932 | MS.gene05210:intron | 30.0% |
| ! | TTACCAGGTGTTTTTCTTTT+TGG | + | chr6.4:52508592-52508611 | MS.gene05210:intron | 30.0% |
| ! | TTGCTGTTAATGATGATGAA+AGG | + | chr6.4:52507295-52507314 | MS.gene05210:intron | 30.0% |
| ! | TTGTTAGCTGATTTATGCAT+AGG | + | chr6.4:52510851-52510870 | MS.gene05210:intron | 30.0% |
| ! | TTTCAAGTGGGTAAAAGTTA+GGG | - | chr6.4:52510219-52510238 | None:intergenic | 30.0% |
| ! | TTTTGCGAGAAATGCATTTT+GGG | - | chr6.4:52511436-52511455 | None:intergenic | 30.0% |
| ! | TTTTTGCGAGAAATGCATTT+TGG | - | chr6.4:52511437-52511456 | None:intergenic | 30.0% |
| !! | ACCGCTATTTCATAACTTTT+AGG | - | chr6.4:52511824-52511843 | None:intergenic | 30.0% |
| !! | AGGTGTTGAAATTGGAAATA+AGG | + | chr6.4:52512476-52512495 | MS.gene05210:CDS | 30.0% |
| !! | ATCTTTGGAATTCAAGTTGT+AGG | + | chr6.4:52512264-52512283 | MS.gene05210:intron | 30.0% |
| !! | CGTAATGTTTTGAATTTTGG+TGG | + | chr6.4:52511638-52511657 | MS.gene05210:intron | 30.0% |
| !! | TTTTGAATAACGGGAATGAT+GGG | - | chr6.4:52512171-52512190 | None:intergenic | 30.0% |
| !!! | GTTGTTTGGTTTTGAGTTTT+AGG | - | chr6.4:52506410-52506429 | None:intergenic | 30.0% |
| !!! | GTTTTATGAGCACTTTTTTG+TGG | + | chr6.4:52508212-52508231 | MS.gene05210:intron | 30.0% |
| !!! | GTTTTATTTGTTCGTGAAAG+CGG | + | chr6.4:52506926-52506945 | MS.gene05210:CDS | 30.0% |
| !!! | GTTTTGAGTTTTAGGGTTTT+GGG | - | chr6.4:52506402-52506421 | None:intergenic | 30.0% |
| AAAGAGAAATGCCAATATCC+AGG | - | chr6.4:52510342-52510361 | None:intergenic | 35.0% | |
| AAAGGATAAAGATCTTACCC+AGG | - | chr6.4:52510993-52511012 | None:intergenic | 35.0% | |
| AACTACTCTGGTTGCATATA+AGG | - | chr6.4:52511126-52511145 | None:intergenic | 35.0% | |
| AACTTGTCTCTTGAAATGAC+AGG | + | chr6.4:52512439-52512458 | MS.gene05210:intron | 35.0% | |
| AAGTGAAACCACCTAAAAAC+AGG | + | chr6.4:52512562-52512581 | MS.gene05210:CDS | 35.0% | |
| AATAACTGTTCTGTTTCCCA+TGG | - | chr6.4:52509848-52509867 | None:intergenic | 35.0% | |
| AATACACACATAGCAACTGT+TGG | + | chr6.4:52509889-52509908 | MS.gene05210:CDS | 35.0% | |
| AATAGCACCTGATTCATACT+GGG | - | chr6.4:52510772-52510791 | None:intergenic | 35.0% | |
| AATGAGAATCAAGCATTTGC+CGG | - | chr6.4:52507777-52507796 | None:intergenic | 35.0% | |
| AATGTCATCTTATGAGGATG+AGG | + | chr6.4:52509918-52509937 | MS.gene05210:CDS | 35.0% | |
| ACAGATCTCGATATATAACC+CGG | - | chr6.4:52506855-52506874 | None:intergenic | 35.0% | |
| AGGCATTTACTACTCAGAAT+TGG | + | chr6.4:52512523-52512542 | MS.gene05210:CDS | 35.0% | |
| ATACACACATAGCAACTGTT+GGG | + | chr6.4:52509890-52509909 | MS.gene05210:CDS | 35.0% | |
| ATACAGCAAAGCAAACAACT+AGG | - | chr6.4:52508439-52508458 | None:intergenic | 35.0% | |
| ATCACTGCTATCTCAACAAA+GGG | + | chr6.4:52511969-52511988 | MS.gene05210:intron | 35.0% | |
| ATCCTTTACTATTGGGGTAT+TGG | + | chr6.4:52511006-52511025 | MS.gene05210:intron | 35.0% | |
| ATCGAACCAATTCCAAAACT+CGG | - | chr6.4:52506589-52506608 | None:intergenic | 35.0% | |
| ATGGGAGTCATACTTGTTTA+TGG | + | chr6.4:52512026-52512045 | MS.gene05210:intron | 35.0% | |
| ATTAATGCTGTCCTGGATAT+TGG | + | chr6.4:52510328-52510347 | MS.gene05210:intron | 35.0% | |
| CAACTTGAATTCCAAAGATC+TGG | - | chr6.4:52512263-52512282 | None:intergenic | 35.0% | |
| CGTTATTCAAAACAATGGGA+GGG | + | chr6.4:52512179-52512198 | MS.gene05210:intron | 35.0% | |
| CTACTGTGAAGAATTTGACT+CGG | + | chr6.4:52509038-52509057 | MS.gene05210:CDS | 35.0% | |
| CTTGTACCTATCAAGGAAAA+AGG | - | chr6.4:52510922-52510941 | None:intergenic | 35.0% | |
| GAACTGCAAATCTGAGAAAA+TGG | - | chr6.4:52506701-52506720 | None:intergenic | 35.0% | |
| GAAGTAACTAGTTGAGCAAA+AGG | + | chr6.4:52509147-52509166 | MS.gene05210:intron | 35.0% | |
| GACAAGTTATCATTGGATGT+CGG | - | chr6.4:52507392-52507411 | None:intergenic | 35.0% | |
| GAGGATGTAGATTAAACCTA+GGG | - | chr6.4:52506457-52506476 | None:intergenic | 35.0% | |
| GATATGCTATTCACTGTACT+TGG | + | chr6.4:52509653-52509672 | MS.gene05210:CDS | 35.0% | |
| GATGAGGGTAATTACAACAT+TGG | - | chr6.4:52509335-52509354 | None:intergenic | 35.0% | |
| GCAATACGACAAGTTATCAT+TGG | - | chr6.4:52507399-52507418 | None:intergenic | 35.0% | |
| GCAATATCATGAGATCTCAT+TGG | + | chr6.4:52507991-52508010 | MS.gene05210:intron | 35.0% | |
| GGAAAAGGAACAGCAATATA+TGG | - | chr6.4:52508862-52508881 | None:intergenic | 35.0% | |
| GGAGAATATCGTGTAGATAA+AGG | + | chr6.4:52510511-52510530 | MS.gene05210:CDS | 35.0% | |
| TACCAATACCCCAATAGTAA+AGG | - | chr6.4:52511011-52511030 | None:intergenic | 35.0% | |
| TACTGTGAAGAATTTGACTC+GGG | + | chr6.4:52509039-52509058 | MS.gene05210:CDS | 35.0% | |
| TAGCGTTTGTCATAGAGAAA+TGG | - | chr6.4:52510095-52510114 | None:intergenic | 35.0% | |
| TATATATCGAGATCTGTTGC+TGG | + | chr6.4:52506858-52506877 | MS.gene05210:CDS | 35.0% | |
| TATTACTGAAAAGGAGCAGA+TGG | - | chr6.4:52509274-52509293 | None:intergenic | 35.0% | |
| TCAGAGACAGAAGCAATAAT+TGG | - | chr6.4:52508800-52508819 | None:intergenic | 35.0% | |
| TGGATAGTTTCAACATGTGT+TGG | + | chr6.4:52508298-52508317 | MS.gene05210:intron | 35.0% | |
| TGTTCAATCTGGTGAACATA+TGG | + | chr6.4:52507172-52507191 | MS.gene05210:CDS | 35.0% | |
| TTAAACCTAGGGTTGTGATT+CGG | - | chr6.4:52506446-52506465 | None:intergenic | 35.0% | |
| TTACTGGGAGATATTCATTG+AGG | + | chr6.4:52507072-52507091 | MS.gene05210:CDS | 35.0% | |
| TTTCTATGGATGGTGAGAAT+TGG | + | chr6.4:52510442-52510461 | MS.gene05210:CDS | 35.0% | |
| ! | AAGCTGTCTTATTATCGGTT+TGG | + | chr6.4:52510939-52510958 | MS.gene05210:CDS | 35.0% |
| ! | AGATCTTGGATTGTTGATGA+TGG | - | chr6.4:52506366-52506385 | None:intergenic | 35.0% |
| ! | AGTTAGCATTTTGTCTCTTG+AGG | + | chr6.4:52508554-52508573 | MS.gene05210:intron | 35.0% |
| ! | AGTTGTTTGCTTTGCTGTAT+TGG | + | chr6.4:52508439-52508458 | MS.gene05210:intron | 35.0% |
| ! | ATAATGCTGTTTGTTTACCG+TGG | + | chr6.4:52508490-52508509 | MS.gene05210:intron | 35.0% |
| ! | ATCTTATGATAATGAAGGCG+TGG | + | chr6.4:52506881-52506900 | MS.gene05210:CDS | 35.0% |
| ! | ATTATCGTGAGGCTTACTTT+TGG | + | chr6.4:52509755-52509774 | MS.gene05210:CDS | 35.0% |
| ! | ATTTTTATATGGTTTCGGCG+TGG | + | chr6.4:52506994-52507013 | MS.gene05210:CDS | 35.0% |
| ! | CTTACAAGCATGTATTTTGC+TGG | + | chr6.4:52508947-52508966 | MS.gene05210:CDS | 35.0% |
| ! | CTTTCAAGTGGGTAAAAGTT+AGG | - | chr6.4:52510220-52510239 | None:intergenic | 35.0% |
| ! | GATTGGGTAAAGCATTTACT+CGG | + | chr6.4:52508614-52508633 | MS.gene05210:CDS | 35.0% |
| ! | GCTGGATCTTATGATAATGA+AGG | + | chr6.4:52506876-52506895 | MS.gene05210:CDS | 35.0% |
| ! | GCTTGATTGTTGTTGATGAA+AGG | + | chr6.4:52507616-52507635 | MS.gene05210:intron | 35.0% |
| ! | GGGTTTTACATTTGGATTCA+TGG | + | chr6.4:52508355-52508374 | MS.gene05210:intron | 35.0% |
| ! | GGTACAAGCTGTCTTATTAT+CGG | + | chr6.4:52510934-52510953 | MS.gene05210:intron | 35.0% |
| ! | TATCCCGCTATAGCATTTTT+GGG | + | chr6.4:52511859-52511878 | MS.gene05210:intron | 35.0% |
| ! | TTTGCGAGAAATGCATTTTG+GGG | - | chr6.4:52511435-52511454 | None:intergenic | 35.0% |
| ! | TTTTTATATGGTTTCGGCGT+GGG | + | chr6.4:52506995-52507014 | MS.gene05210:CDS | 35.0% |
| !! | AGCTGTCTTATTATCGGTTT+GGG | + | chr6.4:52510940-52510959 | MS.gene05210:CDS | 35.0% |
| !! | CATGTATTTTGCTGGTGTTA+TGG | + | chr6.4:52508955-52508974 | MS.gene05210:CDS | 35.0% |
| !! | GCTTTATGTATTGGTGTTGT+TGG | + | chr6.4:52507049-52507068 | MS.gene05210:CDS | 35.0% |
| !! | GTTTTGAATAACGGGAATGA+TGG | - | chr6.4:52512172-52512191 | None:intergenic | 35.0% |
| !! | TAGTAGTTAATAGCGGATAG+CGG | - | chr6.4:52511900-52511919 | None:intergenic | 35.0% |
| !! | TATTGGTGTTGTTGGTTACT+GGG | + | chr6.4:52507057-52507076 | MS.gene05210:CDS | 35.0% |
| !!! | CCTCCCATTGTTTTGAATAA+CGG | - | chr6.4:52512181-52512200 | None:intergenic | 35.0% |
| !!! | CTCCCATTGTTTTGAATAAC+GGG | - | chr6.4:52512180-52512199 | None:intergenic | 35.0% |
| !!! | GGTGCTATGATGTTACTTTT+CGG | + | chr6.4:52509610-52509629 | MS.gene05210:CDS | 35.0% |
| !!! | GGTTTTGAGTTTTAGGGTTT+TGG | - | chr6.4:52506403-52506422 | None:intergenic | 35.0% |
| AAAGGAACTGGTGCTTCAAA+AGG | + | chr6.4:52509103-52509122 | MS.gene05210:CDS | 40.0% | |
| AAAGTCCAAACTGTACAGAG+TGG | + | chr6.4:52509073-52509092 | MS.gene05210:CDS | 40.0% | |
| AAGACAGCTTGTACCTATCA+AGG | - | chr6.4:52510929-52510948 | None:intergenic | 40.0% | |
| AATTAACCTATGTGCTTGCG+AGG | + | chr6.4:52508075-52508094 | MS.gene05210:intron | 40.0% | |
| ACAATCAAGCATTAACCCAG+AGG | - | chr6.4:52507606-52507625 | None:intergenic | 40.0% | |
| ACTCTTTACCTCACAGAACA+CGG | + | chr6.4:52506558-52506577 | MS.gene05210:CDS | 40.0% | |
| AGCGCTTGAAGCAAAAATAG+AGG | - | chr6.4:52508892-52508911 | None:intergenic | 40.0% | |
| ATACCGCAATAGCACTAATG+AGG | - | chr6.4:52509015-52509034 | None:intergenic | 40.0% | |
| ATAGCACCTGATTCATACTG+GGG | - | chr6.4:52510771-52510790 | None:intergenic | 40.0% | |
| ATTAACCTATGTGCTTGCGA+GGG | + | chr6.4:52508076-52508095 | MS.gene05210:intron | 40.0% | |
| ATTCCAACCACTCTTTCAAG+TGG | - | chr6.4:52510232-52510251 | None:intergenic | 40.0% | |
| CAATAGCACCTGATTCATAC+TGG | - | chr6.4:52510773-52510792 | None:intergenic | 40.0% | |
| CAATGATACAGTAGCATCCA+CGG | - | chr6.4:52508510-52508529 | None:intergenic | 40.0% | |
| CAATGCAATGCAATGCAATG+TGG | - | chr6.4:52507237-52507256 | None:intergenic | 40.0% | |
| CACGATATTCTCCATTGACA+AGG | - | chr6.4:52510504-52510523 | None:intergenic | 40.0% | |
| CACTGAAGCTTAACTAGGTT+GGG | + | chr6.4:52510720-52510739 | MS.gene05210:intron | 40.0% | |
| CAGCAGTAAGCATTAAACCA+GGG | - | chr6.4:52506659-52506678 | None:intergenic | 40.0% | |
| CATCAAAGAATGAGGCAAGA+AGG | + | chr6.4:52512118-52512137 | MS.gene05210:intron | 40.0% | |
| CATCACTGCTATCTCAACAA+AGG | + | chr6.4:52511968-52511987 | MS.gene05210:intron | 40.0% | |
| CATCTTTGACGATTATCGTG+AGG | + | chr6.4:52509744-52509763 | MS.gene05210:CDS | 40.0% | |
| CATGAGATCTCATTGGATGT+CGG | + | chr6.4:52507998-52508017 | MS.gene05210:intron | 40.0% | |
| CCGTTATTCAAAACAATGGG+AGG | + | chr6.4:52512178-52512197 | MS.gene05210:intron | 40.0% | |
| CCTACAATGTGCATGAGTTT+GGG | + | chr6.4:52512141-52512160 | MS.gene05210:intron | 40.0% | |
| CGAGGATGTAGATTAAACCT+AGG | - | chr6.4:52506458-52506477 | None:intergenic | 40.0% | |
| CTACTAGTACACAGGGATTA+GGG | - | chr6.4:52512213-52512232 | None:intergenic | 40.0% | |
| GAACCAGATTACCTTGTCAA+TGG | + | chr6.4:52510490-52510509 | MS.gene05210:CDS | 40.0% | |
| GACTATGTGTTAGTCGTGTT+TGG | + | chr6.4:52509970-52509989 | MS.gene05210:CDS | 40.0% | |
| GCAACCAGAGTAGTTAATAG+CGG | + | chr6.4:52511131-52511150 | MS.gene05210:intron | 40.0% | |
| GCTTGATCCAACATATGCTA+AGG | + | chr6.4:52508766-52508785 | MS.gene05210:CDS | 40.0% | |
| GGATCATGGATTCATAACGA+AGG | - | chr6.4:52506506-52506525 | None:intergenic | 40.0% | |
| GGCAAATGCTTGATTCTCAT+TGG | + | chr6.4:52507776-52507795 | MS.gene05210:intron | 40.0% | |
| GGGAAAGAAATATGGGATTC+TGG | + | chr6.4:52506792-52506811 | MS.gene05210:CDS | 40.0% | |
| GGGTTTCAACATGTTCAATC+TGG | + | chr6.4:52507161-52507180 | MS.gene05210:CDS | 40.0% | |
| GGTGAACATATGGCTTCTAT+GGG | + | chr6.4:52507182-52507201 | MS.gene05210:CDS | 40.0% | |
| GGTTATCAAATCACTGCCAT+GGG | + | chr6.4:52509829-52509848 | MS.gene05210:CDS | 40.0% | |
| GTAGTATTCGACGCGAAAAA+TGG | - | chr6.4:52506753-52506772 | None:intergenic | 40.0% | |
| TATGTGTTAGTCGTGTTTGG+TGG | + | chr6.4:52509973-52509992 | MS.gene05210:CDS | 40.0% | |
| TCTCCATTGACAAGGTAATC+TGG | - | chr6.4:52510496-52510515 | None:intergenic | 40.0% | |
| TGAAACCACCTAAAAACAGG+TGG | + | chr6.4:52512565-52512584 | MS.gene05210:CDS | 40.0% | |
| TGCTATGTGTGTATTGTTCC+AGG | - | chr6.4:52509884-52509903 | None:intergenic | 40.0% | |
| TGCTTCAAAAGGCTCTTCTA+AGG | + | chr6.4:52509114-52509133 | MS.gene05210:CDS | 40.0% | |
| TGGATCGAATTCATGGATCA+TGG | - | chr6.4:52506520-52506539 | None:intergenic | 40.0% | |
| TGGTGAACATATGGCTTCTA+TGG | + | chr6.4:52507181-52507200 | MS.gene05210:CDS | 40.0% | |
| TGGTTATCAAATCACTGCCA+TGG | + | chr6.4:52509828-52509847 | MS.gene05210:CDS | 40.0% | |
| TGTAATTACCCTCATCGGTA+TGG | + | chr6.4:52509339-52509358 | MS.gene05210:intron | 40.0% | |
| TTACTGCCTACTAGTACACA+GGG | - | chr6.4:52512220-52512239 | None:intergenic | 40.0% | |
| ! | ACATCATAGCACCGTTCTTT+TGG | - | chr6.4:52509603-52509622 | None:intergenic | 40.0% |
| ! | ATCCCGCTATAGCATTTTTG+GGG | + | chr6.4:52511860-52511879 | MS.gene05210:intron | 40.0% |
| ! | ATGCCTCATTAGTGCTATTG+CGG | + | chr6.4:52509009-52509028 | MS.gene05210:CDS | 40.0% |
| ! | CTATCCCGCTATAGCATTTT+TGG | + | chr6.4:52511858-52511877 | MS.gene05210:intron | 40.0% |
| ! | CTATGCAGATTCGGTTTGTT+GGG | + | chr6.4:52507141-52507160 | MS.gene05210:CDS | 40.0% |
| ! | CTTTTACCCACTTGAAAGAG+TGG | + | chr6.4:52510222-52510241 | MS.gene05210:intron | 40.0% |
| ! | GCTTGATTCTCATTGGTTGT+CGG | + | chr6.4:52507783-52507802 | MS.gene05210:intron | 40.0% |
| ! | GTTATGTCATGGTGGGATTA+TGG | + | chr6.4:52509808-52509827 | MS.gene05210:CDS | 40.0% |
| ! | GTTTAATGGAGGTGCATTGT+CGG | + | chr6.4:52507680-52507699 | MS.gene05210:intron | 40.0% |
| ! | TGACTTTAAGGGAGGTGAAT+TGG | + | chr6.4:52507355-52507374 | MS.gene05210:intron | 40.0% |
| ! | TGCTTTGCTGTATTGGAAGT+TGG | + | chr6.4:52508446-52508465 | MS.gene05210:intron | 40.0% |
| ! | TTAAAGGGTGTAGTCTAACG+AGG | - | chr6.4:52508122-52508141 | None:intergenic | 40.0% |
| ! | TTCCAACCACTCTTTCAAGT+GGG | - | chr6.4:52510231-52510250 | None:intergenic | 40.0% |
| ! | TTTAATGGAGGTGCATTGTC+GGG | + | chr6.4:52507681-52507700 | MS.gene05210:intron | 40.0% |
| ! | TTTTATATGGTTTCGGCGTG+GGG | + | chr6.4:52506996-52507015 | MS.gene05210:CDS | 40.0% |
| !! | AGAATTTGACTCGGGTTGTT+AGG | + | chr6.4:52509047-52509066 | MS.gene05210:CDS | 40.0% |
| !! | ATAGCACCGTTCTTTTGGAA+AGG | - | chr6.4:52509598-52509617 | None:intergenic | 40.0% |
| !! | ATTGGTTCGATTCCGATTCA+TGG | + | chr6.4:52506598-52506617 | MS.gene05210:CDS | 40.0% |
| !! | GAATTTGACTCGGGTTGTTA+GGG | + | chr6.4:52509048-52509067 | MS.gene05210:CDS | 40.0% |
| !! | GCTGTCTTATTATCGGTTTG+GGG | + | chr6.4:52510941-52510960 | MS.gene05210:CDS | 40.0% |
| !! | GTATTGGTGTTGTTGGTTAC+TGG | + | chr6.4:52507056-52507075 | MS.gene05210:CDS | 40.0% |
| !! | TGTTGCTTGCTATGCAGATT+CGG | + | chr6.4:52507132-52507151 | MS.gene05210:CDS | 40.0% |
| !! | TTTGGTGCCGCTTTATGTAT+TGG | + | chr6.4:52507040-52507059 | MS.gene05210:CDS | 40.0% |
| !!! | CTGACTTGGATTGTTTTACC+AGG | + | chr6.4:52508577-52508596 | MS.gene05210:intron | 40.0% |
| !!! | GAGTTTTAGGGTTTTGGGAA+GGG | - | chr6.4:52506397-52506416 | None:intergenic | 40.0% |
| !!! | GTTTCTCCGAGTTTTGGAAT+TGG | + | chr6.4:52506580-52506599 | MS.gene05210:CDS | 40.0% |
| !!! | TGAGTTTTAGGGTTTTGGGA+AGG | - | chr6.4:52506398-52506417 | None:intergenic | 40.0% |
| !!! | TTTTGGGGTGAGAAGATGAA+AGG | - | chr6.4:52511420-52511439 | None:intergenic | 40.0% |
| AAAACCGCTATGCAGTGTTG+CGG | - | chr6.4:52511256-52511275 | None:intergenic | 45.0% | |
| AAATATGGGATTCTGGCGCA+GGG | + | chr6.4:52506799-52506818 | MS.gene05210:CDS | 45.0% | |
| AAGCAAAAATAGAGGCCAGC+AGG | - | chr6.4:52508884-52508903 | None:intergenic | 45.0% | |
| AATCGTCAAAGATGACCCTC+TGG | - | chr6.4:52509738-52509757 | None:intergenic | 45.0% | |
| ACAGAATATGGCAAACCACC+TGG | + | chr6.4:52510972-52510991 | MS.gene05210:CDS | 45.0% | |
| ACCGAGTGGATACCATGAAT+CGG | - | chr6.4:52506613-52506632 | None:intergenic | 45.0% | |
| ACTAATGAGGCATACAGCAG+GGG | - | chr6.4:52509002-52509021 | None:intergenic | 45.0% | |
| AGCAAAAATAGAGGCCAGCA+GGG | - | chr6.4:52508883-52508902 | None:intergenic | 45.0% | |
| AGTTAATAGCGGCGCTATAG+CGG | + | chr6.4:52511142-52511161 | MS.gene05210:intron | 45.0% | |
| ATCAAGCATTAACCCAGAGG+TGG | - | chr6.4:52507603-52507622 | None:intergenic | 45.0% | |
| ATCACTGTAACCAGTGCAGT+TGG | + | chr6.4:52508668-52508687 | MS.gene05210:CDS | 45.0% | |
| ATCCCACCATGACATAACCT+TGG | - | chr6.4:52509806-52509825 | None:intergenic | 45.0% | |
| ATGCCAAGGTTATGTCATGG+TGG | + | chr6.4:52509800-52509819 | MS.gene05210:CDS | 45.0% | |
| CAAACTGTACAGAGTGGTTC+TGG | + | chr6.4:52509079-52509098 | MS.gene05210:CDS | 45.0% | |
| CAAGTGGGTAAAAGTTAGGG+TGG | - | chr6.4:52510216-52510235 | None:intergenic | 45.0% | |
| CACTAATGAGGCATACAGCA+GGG | - | chr6.4:52509003-52509022 | None:intergenic | 45.0% | |
| CAGAACCACTCTGTACAGTT+TGG | - | chr6.4:52509081-52509100 | None:intergenic | 45.0% | |
| CAGAATATGGCAAACCACCT+GGG | + | chr6.4:52510973-52510992 | MS.gene05210:CDS | 45.0% | |
| CAGATGCCAAGGTTATGTCA+TGG | + | chr6.4:52509797-52509816 | MS.gene05210:CDS | 45.0% | |
| CATCTGGTTACATATCACCG+TGG | + | chr6.4:52508723-52508742 | MS.gene05210:CDS | 45.0% | |
| CATGACATAACCTTGGCATC+TGG | - | chr6.4:52509799-52509818 | None:intergenic | 45.0% | |
| CCAACCTAGTTAAGCTTCAG+TGG | - | chr6.4:52510722-52510741 | None:intergenic | 45.0% | |
| CCACTGAAGCTTAACTAGGT+TGG | + | chr6.4:52510719-52510738 | MS.gene05210:intron | 45.0% | |
| CCCAAACTCATGCACATTGT+AGG | - | chr6.4:52512144-52512163 | None:intergenic | 45.0% | |
| CCTAATCCCTGTGTACTAGT+AGG | + | chr6.4:52512211-52512230 | MS.gene05210:intron | 45.0% | |
| CCTACTAGTACACAGGGATT+AGG | - | chr6.4:52512214-52512233 | None:intergenic | 45.0% | |
| CGACCCCAAAAATGCTATAG+CGG | - | chr6.4:52511866-52511885 | None:intergenic | 45.0% | |
| CTATGGATGGTGAGAATTGG+TGG | + | chr6.4:52510445-52510464 | MS.gene05210:CDS | 45.0% | |
| CTCAATTGTCTTGGCTGCAA+GGG | + | chr6.4:52509702-52509721 | MS.gene05210:CDS | 45.0% | |
| CTCATCTCCCTCAATTGTCT+TGG | + | chr6.4:52509693-52509712 | MS.gene05210:CDS | 45.0% | |
| CTTACTGCCTACTAGTACAC+AGG | - | chr6.4:52512221-52512240 | None:intergenic | 45.0% | |
| CTTGCAGCCAAGACAATTGA+GGG | - | chr6.4:52509703-52509722 | None:intergenic | 45.0% | |
| GAAGGGAATTGAGGAGATCT+TGG | - | chr6.4:52506380-52506399 | None:intergenic | 45.0% | |
| GAATAAAACCTTCCGGTCCA+CGG | - | chr6.4:52508743-52508762 | None:intergenic | 45.0% | |
| GACCCCAAAAATGCTATAGC+GGG | - | chr6.4:52511865-52511884 | None:intergenic | 45.0% | |
| GCAGCAGTAAGCATTAAACC+AGG | - | chr6.4:52506660-52506679 | None:intergenic | 45.0% | |
| GCCTACAATGTGCATGAGTT+TGG | + | chr6.4:52512140-52512159 | MS.gene05210:intron | 45.0% | |
| GCGCCGTAAAGAATGAAAGA+AGG | - | chr6.4:52511398-52511417 | None:intergenic | 45.0% | |
| GCGTGCAATGTCATCTTATG+AGG | + | chr6.4:52509912-52509931 | MS.gene05210:CDS | 45.0% | |
| GGATAAAGATCTTACCCAGG+TGG | - | chr6.4:52510990-52511009 | None:intergenic | 45.0% | |
| GGTGCAGTAGGTATGGTAAT+AGG | + | chr6.4:52509360-52509379 | MS.gene05210:intron | 45.0% | |
| GGTTTAATGCTTACTGCTGC+TGG | + | chr6.4:52506660-52506679 | MS.gene05210:CDS | 45.0% | |
| GTGGTGCGGTAGTTGAAATA+TGG | - | chr6.4:52506540-52506559 | None:intergenic | 45.0% | |
| GTGTCGAGCTGTGAATATAG+TGG | - | chr6.4:52510126-52510145 | None:intergenic | 45.0% | |
| GTGTTCTGTGAGGTAAAGAG+TGG | - | chr6.4:52506559-52506578 | None:intergenic | 45.0% | |
| GTTCGTGAAAGCGGTGAATA+CGG | + | chr6.4:52506935-52506954 | MS.gene05210:CDS | 45.0% | |
| TACCCACTTGAAAGAGTGGT+TGG | + | chr6.4:52510226-52510245 | MS.gene05210:intron | 45.0% | |
| TAGCACCTGATTCATACTGG+GGG | - | chr6.4:52510770-52510789 | None:intergenic | 45.0% | |
| TATCTCATAACGCTACGCCA+TGG | - | chr6.4:52511218-52511237 | None:intergenic | 45.0% | |
| TCAAGCATTAACCCAGAGGT+GGG | - | chr6.4:52507602-52507621 | None:intergenic | 45.0% | |
| TCAATTGTCTTGGCTGCAAG+GGG | + | chr6.4:52509703-52509722 | MS.gene05210:CDS | 45.0% | |
| TCCCAGCCTTTCCAAAAGAA+CGG | + | chr6.4:52509589-52509608 | MS.gene05210:CDS | 45.0% | |
| TCCGATTCATGGTATCCACT+CGG | + | chr6.4:52506609-52506628 | MS.gene05210:CDS | 45.0% | |
| TGCCAAGGTTATGTCATGGT+GGG | + | chr6.4:52509801-52509820 | MS.gene05210:CDS | 45.0% | |
| TTCGTGAAAGCGGTGAATAC+GGG | + | chr6.4:52506936-52506955 | MS.gene05210:CDS | 45.0% | |
| TTTAACCCTCGCAAGCACAT+AGG | - | chr6.4:52508084-52508103 | None:intergenic | 45.0% | |
| TTTGTCTCTTGAGGCTGACT+TGG | + | chr6.4:52508563-52508582 | MS.gene05210:intron | 45.0% | |
| ! | AAAGCAACGACGGCGTTTTA+CGG | - | chr6.4:52511484-52511503 | None:intergenic | 45.0% |
| ! | AACACGGTTTCTCCGAGTTT+TGG | + | chr6.4:52506574-52506593 | MS.gene05210:CDS | 45.0% |
| ! | CATAAAGTTGGAGTACCTGG+AGG | + | chr6.4:52512500-52512519 | MS.gene05210:CDS | 45.0% |
| ! | GCTATGCAGATTCGGTTTGT+TGG | + | chr6.4:52507140-52507159 | MS.gene05210:CDS | 45.0% |
| ! | GGACATAAAGTTGGAGTACC+TGG | + | chr6.4:52512497-52512516 | MS.gene05210:CDS | 45.0% |
| ! | GGGTGTCTTTTTCTTGCTTC+AGG | + | chr6.4:52507202-52507221 | MS.gene05210:CDS | 45.0% |
| ! | TGCATTGATCGCGATTTGTC+CGG | + | chr6.4:52506833-52506852 | MS.gene05210:CDS | 45.0% |
| !! | ACCGTTCTTTTGGAAAGGCT+GGG | - | chr6.4:52509593-52509612 | None:intergenic | 45.0% |
| !! | AGTGGTTCTGGTAAAGGAAC+TGG | + | chr6.4:52509091-52509110 | MS.gene05210:CDS | 45.0% |
| !! | GAGGAGGAGTTCTTGTTGTT+TGG | - | chr6.4:52506424-52506443 | None:intergenic | 45.0% |
| !! | GTACAGAGTGGTTCTGGTAA+AGG | + | chr6.4:52509085-52509104 | MS.gene05210:CDS | 45.0% |
| !!! | CGCTATAGCATTTTTGGGGT+CGG | + | chr6.4:52511864-52511883 | MS.gene05210:intron | 45.0% |
| !!! | TTATGTTTTTATTATAAATT+TGG | + | chr6.4:52507022-52507041 | MS.gene05210:CDS | 5.0% |
| AATAGAGGCCAGCAGGGAAA+AGG | - | chr6.4:52508877-52508896 | None:intergenic | 50.0% | |
| AGAGACGAGTGATGAATGCG+AGG | - | chr6.4:52506476-52506495 | None:intergenic | 50.0% | |
| AGCACCTGATTCATACTGGG+GGG | - | chr6.4:52510769-52510788 | None:intergenic | 50.0% | |
| AGCGCCGCTATTAACTACTC+TGG | - | chr6.4:52511138-52511157 | None:intergenic | 50.0% | |
| ATCTCGAGTCGCCAGATCTT+TGG | + | chr6.4:52512249-52512268 | MS.gene05210:intron | 50.0% | |
| ATGAAGGACGACCAAGCAGT+AGG | - | chr6.4:52508830-52508849 | None:intergenic | 50.0% | |
| ATGTAACTGACCCCACCTCT+GGG | + | chr6.4:52507588-52507607 | MS.gene05210:intron | 50.0% | |
| CAAGCATTAACCCAGAGGTG+GGG | - | chr6.4:52507601-52507620 | None:intergenic | 50.0% | |
| CCTCAATTGTCTTGGCTGCA+AGG | + | chr6.4:52509701-52509720 | MS.gene05210:CDS | 50.0% | |
| CCTTGCAGCCAAGACAATTG+AGG | - | chr6.4:52509704-52509723 | None:intergenic | 50.0% | |
| CGACACAACACTTGCACATG+TGG | + | chr6.4:52510140-52510159 | MS.gene05210:intron | 50.0% | |
| CGCCATGGCTTATTGCATAG+CGG | - | chr6.4:52511203-52511222 | None:intergenic | 50.0% | |
| CTACTGCACCATACCGATGA+GGG | - | chr6.4:52509350-52509369 | None:intergenic | 50.0% | |
| CTGGCCACTGAAGCTTAACT+AGG | + | chr6.4:52510715-52510734 | MS.gene05210:intron | 50.0% | |
| CTGTGAGGTAAAGAGTGGTG+CGG | - | chr6.4:52506554-52506573 | None:intergenic | 50.0% | |
| GAAATAGCGGTCATAGCGCT+AGG | + | chr6.4:52511833-52511852 | MS.gene05210:intron | 50.0% | |
| GAAATATGGGATTCTGGCGC+AGG | + | chr6.4:52506798-52506817 | MS.gene05210:CDS | 50.0% | |
| GAATACGGGGAGTTTGTCGT+GGG | + | chr6.4:52506950-52506969 | MS.gene05210:CDS | 50.0% | |
| GACATAACCTTGGCATCTGG+TGG | - | chr6.4:52509796-52509815 | None:intergenic | 50.0% | |
| GACCGCTATGCAATAAGCCA+TGG | + | chr6.4:52511198-52511217 | MS.gene05210:intron | 50.0% | |
| GAGTAGTAAATGCCTCCTCC+AGG | - | chr6.4:52512518-52512537 | None:intergenic | 50.0% | |
| GCACTAATGAGGCATACAGC+AGG | - | chr6.4:52509004-52509023 | None:intergenic | 50.0% | |
| GCTTGCGAGGGTTAAAACTG+AGG | + | chr6.4:52508088-52508107 | MS.gene05210:intron | 50.0% | |
| GGCGTAGCGTTATGAGATAG+CGG | + | chr6.4:52511219-52511238 | MS.gene05210:intron | 50.0% | |
| GGGGAGCTGACAACAGAATA+TGG | + | chr6.4:52510960-52510979 | MS.gene05210:CDS | 50.0% | |
| GGTTACATATCACCGTGGAC+CGG | + | chr6.4:52508728-52508747 | MS.gene05210:CDS | 50.0% | |
| GTGGGTAAAAGTTAGGGTGG+CGG | - | chr6.4:52510213-52510232 | None:intergenic | 50.0% | |
| TATCCACTCGGTCGAATCGT+TGG | + | chr6.4:52506621-52506640 | MS.gene05210:CDS | 50.0% | |
| TATGTAACTGACCCCACCTC+TGG | + | chr6.4:52507587-52507606 | MS.gene05210:intron | 50.0% | |
| TCGGTATGGTGCAGTAGGTA+TGG | + | chr6.4:52509353-52509372 | MS.gene05210:intron | 50.0% | |
| TCGTGAAAGCGGTGAATACG+GGG | + | chr6.4:52506937-52506956 | MS.gene05210:CDS | 50.0% | |
| TGAATACGGGGAGTTTGTCG+TGG | + | chr6.4:52506949-52506968 | MS.gene05210:CDS | 50.0% | |
| TGGATGGTGAGAATTGGTGG+AGG | + | chr6.4:52510448-52510467 | MS.gene05210:CDS | 50.0% | |
| TGGCTTATTGCATAGCGGTC+CGG | - | chr6.4:52511198-52511217 | None:intergenic | 50.0% | |
| ! | AAAGTTGGAGTACCTGGAGG+AGG | + | chr6.4:52512503-52512522 | MS.gene05210:CDS | 50.0% |
| ! | AACCTAGGGTTGTGATTCGG+AGG | - | chr6.4:52506443-52506462 | None:intergenic | 50.0% |
| ! | ATGAGATAGCGGCGCAATAG+CGG | + | chr6.4:52511230-52511249 | MS.gene05210:intron | 50.0% |
| ! | GCATTGATCGCGATTTGTCC+GGG | + | chr6.4:52506834-52506853 | MS.gene05210:CDS | 50.0% |
| ! | GTAACCAGTGCAGTTGGTGT+TGG | + | chr6.4:52508674-52508693 | MS.gene05210:CDS | 50.0% |
| !! | CACCGTTCTTTTGGAAAGGC+TGG | - | chr6.4:52509594-52509613 | None:intergenic | 50.0% |
| !! | CGCGCTAGAGGTGTTGAAAT+TGG | + | chr6.4:52512468-52512487 | MS.gene05210:CDS | 50.0% |
| !! | GTCGTGTTTGGTGGTGTTAC+TGG | + | chr6.4:52509982-52510001 | MS.gene05210:CDS | 50.0% |
| !! | TTGCTGTTCCTTTTCCCTGC+TGG | + | chr6.4:52508866-52508885 | MS.gene05210:CDS | 50.0% |
| !!! | GGGTTTTGGGAAGGGAATTG+AGG | - | chr6.4:52506389-52506408 | None:intergenic | 50.0% |
| AAAGATGACCCTCTGGCCGT+GGG | - | chr6.4:52509731-52509750 | None:intergenic | 55.0% | |
| ACATATCACCGTGGACCGGA+AGG | + | chr6.4:52508732-52508751 | MS.gene05210:CDS | 55.0% | |
| AGATGCCATGCCTACTCCCA+AGG | - | chr6.4:52508708-52508727 | None:intergenic | 55.0% | |
| CATGCCTACTCCCAAGGCAA+CGG | - | chr6.4:52508702-52508721 | None:intergenic | 55.0% | |
| CCTACTGCACCATACCGATG+AGG | - | chr6.4:52509351-52509370 | None:intergenic | 55.0% | |
| CCTCATCGGTATGGTGCAGT+AGG | + | chr6.4:52509348-52509367 | MS.gene05210:intron | 55.0% | |
| CGGAGAAACCGTGTTCTGTG+AGG | - | chr6.4:52506569-52506588 | None:intergenic | 55.0% | |
| CTCCTCCGAATCACAACCCT+AGG | + | chr6.4:52506438-52506457 | MS.gene05210:CDS | 55.0% | |
| CTGAGCATCAGCCTACTGCT+TGG | + | chr6.4:52508816-52508835 | MS.gene05210:CDS | 55.0% | |
| GAACACTCCACCAGATGCCA+AGG | + | chr6.4:52509786-52509805 | MS.gene05210:CDS | 55.0% | |
| GACAGGTATGATCGCGCTAG+AGG | + | chr6.4:52512456-52512475 | MS.gene05210:intron | 55.0% | |
| GCACCTGATTCATACTGGGG+GGG | - | chr6.4:52510768-52510787 | None:intergenic | 55.0% | |
| GTACCCCCCCAGTATGAATC+AGG | + | chr6.4:52510762-52510781 | MS.gene05210:intron | 55.0% | |
| GTTGGACTATGCTACCCTGC+TGG | + | chr6.4:52510692-52510711 | MS.gene05210:intron | 55.0% | |
| TATATGGTTTCGGCGTGGGG+TGG | + | chr6.4:52506999-52507018 | MS.gene05210:CDS | 55.0% | |
| TTGGGAGTAGGCATGGCATC+TGG | + | chr6.4:52508707-52508726 | MS.gene05210:CDS | 55.0% | |
| ! | CTAGGGTTGTGATTCGGAGG+AGG | - | chr6.4:52506440-52506459 | None:intergenic | 55.0% |
| !! | TTTGTCGTGGGCATTGGCGT+CGG | + | chr6.4:52506962-52506981 | MS.gene05210:CDS | 55.0% |
| CAAAGATGACCCTCTGGCCG+TGG | - | chr6.4:52509732-52509751 | None:intergenic | 60.0% | |
| CCACTCGGTCGAATCGTTGG+CGG | + | chr6.4:52506624-52506643 | MS.gene05210:CDS | 60.0% | |
| CGTTGCCTTGGGAGTAGGCA+TGG | + | chr6.4:52508700-52508719 | MS.gene05210:CDS | 60.0% | |
| GACTATGCTACCCTGCTGGC+TGG | + | chr6.4:52510696-52510715 | MS.gene05210:intron | 60.0% | |
| GAGGTGCATTGTCGGGATGC+GGG | + | chr6.4:52507688-52507707 | MS.gene05210:intron | 60.0% | |
| GGCACCAACACCAACTGCAC+TGG | - | chr6.4:52508681-52508700 | None:intergenic | 60.0% | |
| GGCGCTATAGCGGCCAATAG+CGG | + | chr6.4:52511152-52511171 | MS.gene05210:intron | 60.0% | |
| GGGGAGTTTGTCGTGGGCAT+TGG | + | chr6.4:52506956-52506975 | MS.gene05210:CDS | 60.0% | |
| GTTGGCGGTACACTCTACCC+TGG | + | chr6.4:52506639-52506658 | MS.gene05210:CDS | 60.0% | |
| TTCTGGCGCAGGGATTGTCG+CGG | + | chr6.4:52506809-52506828 | MS.gene05210:CDS | 60.0% | |
| ! | GGAGGTGCATTGTCGGGATG+CGG | + | chr6.4:52507687-52507706 | MS.gene05210:intron | 60.0% |
| !! | GGTGTTGGTGCCGTTGCCTT+GGG | + | chr6.4:52508689-52508708 | MS.gene05210:CDS | 60.0% |
| !! | TGGTGTTGGTGCCGTTGCCT+TGG | + | chr6.4:52508688-52508707 | MS.gene05210:CDS | 60.0% |
| !!! | TGGGCATTGGCGTCGGCTTT+TGG | + | chr6.4:52506969-52506988 | MS.gene05210:CDS | 60.0% |
| AGCTTCAGTGGCCAGCCAGC+AGG | - | chr6.4:52510710-52510729 | None:intergenic | 65.0% | |
| CCGCCAACGATTCGACCGAG+TGG | - | chr6.4:52506627-52506646 | None:intergenic | 65.0% | |
| GCGGCCGCAACACTGCATAG+CGG | + | chr6.4:52511249-52511268 | MS.gene05210:intron | 65.0% | |
| GCTTCAGTGGCCAGCCAGCA+GGG | - | chr6.4:52510709-52510728 | None:intergenic | 65.0% | |
| ! | TAGCGGATAGCGGCGCGTAG+CGG | - | chr6.4:52511890-52511909 | None:intergenic | 65.0% |
| !! | GGTGCCGTTGCCTTGGGAGT+AGG | + | chr6.4:52508695-52508714 | MS.gene05210:CDS | 65.0% |
| !! | TTGGCTGCAAGGGGTGCCCA+CGG | + | chr6.4:52509712-52509731 | MS.gene05210:CDS | 65.0% |
| !! | AAGGGGTGCCCACGGCCAGA+GGG | + | chr6.4:52509720-52509739 | MS.gene05210:CDS | 70.0% |
| AGCGGCCAATAGCGGCCGCG+CGG | + | chr6.4:52511160-52511179 | MS.gene05210:intron | 75.0% | |
| CCAATAGCGGCCGCGCGGTG+CGG | + | chr6.4:52511165-52511184 | MS.gene05210:intron | 75.0% | |
| !! | CAAGGGGTGCCCACGGCCAG+AGG | + | chr6.4:52509719-52509738 | MS.gene05210:CDS | 75.0% |
| ! | CCGCACCGCGCGGCCGCTAT+TGG | - | chr6.4:52511168-52511187 | None:intergenic | 80.0% |
| ! | CGCGCGGTGCGGTGCGGTAC+CGG | + | chr6.4:52511176-52511195 | MS.gene05210:intron | 80.0% |
| ! | CGGTACCGCACCGCACCGCG+CGG | - | chr6.4:52511178-52511197 | None:intergenic | 80.0% |
| ! | AGCGGCCGCGCGGTGCGGTG+CGG | + | chr6.4:52511170-52511189 | MS.gene05210:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 52506345 | 52512590 | 52506345 | ID=MS.gene05210 |
| chr6.4 | mRNA | 52506345 | 52512590 | 52506345 | ID=MS.gene05210.t1;Parent=MS.gene05210 |
| chr6.4 | exon | 52506345 | 52507223 | 52506345 | ID=MS.gene05210.t1.exon1;Parent=MS.gene05210.t1 |
| chr6.4 | CDS | 52506345 | 52507223 | 52506345 | ID=cds.MS.gene05210.t1;Parent=MS.gene05210.t1 |
| chr6.4 | exon | 52508599 | 52509135 | 52508599 | ID=MS.gene05210.t1.exon2;Parent=MS.gene05210.t1 |
| chr6.4 | CDS | 52508599 | 52509135 | 52508599 | ID=cds.MS.gene05210.t1;Parent=MS.gene05210.t1 |
| chr6.4 | exon | 52509574 | 52510028 | 52509574 | ID=MS.gene05210.t1.exon3;Parent=MS.gene05210.t1 |
| chr6.4 | CDS | 52509574 | 52510028 | 52509574 | ID=cds.MS.gene05210.t1;Parent=MS.gene05210.t1 |
| chr6.4 | exon | 52510441 | 52510563 | 52510441 | ID=MS.gene05210.t1.exon4;Parent=MS.gene05210.t1 |
| chr6.4 | CDS | 52510441 | 52510563 | 52510441 | ID=cds.MS.gene05210.t1;Parent=MS.gene05210.t1 |
| chr6.4 | exon | 52510935 | 52510994 | 52510935 | ID=MS.gene05210.t1.exon5;Parent=MS.gene05210.t1 |
| chr6.4 | CDS | 52510935 | 52510994 | 52510935 | ID=cds.MS.gene05210.t1;Parent=MS.gene05210.t1 |
| chr6.4 | exon | 52512461 | 52512590 | 52512461 | ID=MS.gene05210.t1.exon6;Parent=MS.gene05210.t1 |
| chr6.4 | CDS | 52512461 | 52512590 | 52512461 | ID=cds.MS.gene05210.t1;Parent=MS.gene05210.t1 |
| Gene Sequence |
| Protein sequence |
