Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029389.t1 | XP_013470197.2 | 97.4 | 757 | 20 | 0 | 1 | 757 | 1 | 757 | 0.00E+00 | 1410.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029389.t1 | F4I4B6 | 64.0 | 752 | 251 | 8 | 13 | 757 | 6 | 744 | 1.0e-251 | 870.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029389.t1 | A0A072W1S7 | 97.3 | 754 | 20 | 0 | 4 | 757 | 1 | 754 | 0.0e+00 | 1405.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067568 | MS.gene029389 | PPI |
| MS.gene029389 | MS.gene006890 | PPI |
| MS.gene006891 | MS.gene029389 | PPI |
| MS.gene56433 | MS.gene029389 | PPI |
| MS.gene059433 | MS.gene029389 | PPI |
| MS.gene029389 | MS.gene059432 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029389.t1 | MTR_1g111120 | 97.347 | 754 | 20 | 0 | 4 | 757 | 1 | 754 | 0.0 | 1514 |
| MS.gene029389.t1 | MTR_6g045363 | 88.142 | 759 | 80 | 5 | 4 | 757 | 3 | 756 | 0.0 | 1329 |
| MS.gene029389.t1 | MTR_4g005930 | 57.973 | 740 | 289 | 10 | 27 | 757 | 21 | 747 | 0.0 | 775 |
| MS.gene029389.t1 | MTR_4g083940 | 35.302 | 728 | 427 | 17 | 46 | 751 | 18 | 723 | 1.11e-116 | 370 |
| MS.gene029389.t1 | MTR_1g069620 | 25.270 | 740 | 507 | 15 | 12 | 738 | 21 | 727 | 7.51e-49 | 185 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029389.t1 | AT1G10385 | 64.163 | 759 | 238 | 11 | 13 | 757 | 6 | 744 | 0.0 | 919 |
| MS.gene029389.t1 | AT5G49830 | 56.528 | 743 | 289 | 12 | 27 | 757 | 15 | 735 | 0.0 | 749 |
| MS.gene029389.t1 | AT5G49830 | 54.393 | 774 | 288 | 13 | 27 | 757 | 15 | 766 | 0.0 | 734 |
| MS.gene029389.t1 | AT5G49830 | 56.821 | 711 | 274 | 11 | 59 | 757 | 108 | 797 | 0.0 | 723 |
| MS.gene029389.t1 | AT1G10180 | 33.148 | 718 | 427 | 16 | 46 | 742 | 18 | 703 | 5.20e-111 | 355 |
Find 147 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAATGCTCAAATGTATT+TGG | 0.147129 | 1.4:+84739677 | MS.gene029389:CDS |
| ATAATTTGTGCAGCTTTATT+TGG | 0.152391 | 1.4:+84740934 | MS.gene029389:intron |
| ATGCAGCTTGGTTAGATAAA+AGG | 0.224927 | 1.4:-84737604 | None:intergenic |
| TCTCAGCCAATAGGACATTA+AGG | 0.231322 | 1.4:-84737763 | None:intergenic |
| CATGTCTGAATCTTCGTTTC+CGG | 0.274051 | 1.4:-84737672 | None:intergenic |
| CTCGTTCATGCTGCGAGATT+TGG | 0.277623 | 1.4:-84736588 | None:intergenic |
| ATCTCCGTTCCCCGAGTTGA+TGG | 0.281148 | 1.4:-84737950 | None:intergenic |
| TTTCTGATGACCAAGACTTT+TGG | 0.282378 | 1.4:+84740437 | MS.gene029389:CDS |
| ATAACTATAAAGATGATAAC+TGG | 0.300984 | 1.4:+84741615 | MS.gene029389:CDS |
| AGTCTCGAGCCGACAACTTA+TGG | 0.301317 | 1.4:+84738073 | MS.gene029389:CDS |
| CTTTAGCTGCTGCTGATGAT+TGG | 0.311358 | 1.4:+84738458 | MS.gene029389:CDS |
| ATCGATGCTGTTGCTGCTAC+AGG | 0.313596 | 1.4:+84741046 | MS.gene029389:CDS |
| TCAAATCAATATGTCAATAA+TGG | 0.316896 | 1.4:+84736424 | None:intergenic |
| CTCAAGATCTGAAATCTCTT+TGG | 0.319417 | 1.4:-84737558 | None:intergenic |
| TGCTCACAAATTCAACTCTA+TGG | 0.352516 | 1.4:+84738582 | MS.gene029389:CDS |
| TGCTCAAATGTATTTGGATA+TGG | 0.360208 | 1.4:+84739683 | MS.gene029389:CDS |
| AACCAAGCTGCATTGGTTCA+TGG | 0.360509 | 1.4:+84737614 | MS.gene029389:CDS |
| AAACTAGAATAAGAAGAAAC+AGG | 0.366793 | 1.4:-84738529 | None:intergenic |
| GACACTTGAAATCTTACAAT+TGG | 0.367328 | 1.4:+84739272 | MS.gene029389:CDS |
| TGAAACCCTTAATGTCCTAT+TGG | 0.368022 | 1.4:+84737757 | MS.gene029389:CDS |
| CAAATTCAACTCTATGGTTC+AGG | 0.372321 | 1.4:+84738588 | MS.gene029389:CDS |
| TGAATCCATGGTAGCTTTAG+AGG | 0.378246 | 1.4:+84737796 | MS.gene029389:CDS |
| TAGTCACTGTCATCTCTTAG+AGG | 0.378681 | 1.4:+84738333 | MS.gene029389:CDS |
| GCCAGTATTATTATTCCTAC+TGG | 0.384328 | 1.4:-84738500 | None:intergenic |
| CTCAGCCAATAGGACATTAA+GGG | 0.386198 | 1.4:-84737762 | None:intergenic |
| ATTGGAGAAGGAAACCATTC+AGG | 0.390426 | 1.4:-84739723 | None:intergenic |
| CTTATCACTGAGAGTGAGAT+TGG | 0.393407 | 1.4:-84736516 | None:intergenic |
| TGAAACAGGACAAACTCCTT+TGG | 0.404599 | 1.4:+84740468 | MS.gene029389:CDS |
| GGGTCCTCTCGGCCTTCAAC+AGG | 0.405904 | 1.4:+84740489 | MS.gene029389:CDS |
| CTTCTGCAGAAGCCTTCTTA+AGG | 0.407214 | 1.4:-84737112 | None:intergenic |
| AGGCGAGAATCCGTTTCTTA+AGG | 0.409182 | 1.4:-84738255 | None:intergenic |
| GAAACAGGACAAACTCCTTT+GGG | 0.418127 | 1.4:+84740469 | MS.gene029389:CDS |
| TTGCAGAAGCAGTGATACTA+TGG | 0.423718 | 1.4:+84740413 | MS.gene029389:CDS |
| ACCAGTAGGAATAATAATAC+TGG | 0.426137 | 1.4:+84738499 | MS.gene029389:CDS |
| CAACGTTTGCCCAAAAGTCT+TGG | 0.435747 | 1.4:-84740447 | None:intergenic |
| ATTTGGATATGGAGGAGAAA+GGG | 0.437364 | 1.4:+84739694 | MS.gene029389:CDS |
| GTTAGATAAAAGGTTTCTCA+TGG | 0.445154 | 1.4:-84737594 | None:intergenic |
| GTATTATTATTCCTACTGGT+TGG | 0.448239 | 1.4:-84738496 | None:intergenic |
| AAACTTTCACATAGCACAAA+AGG | 0.453898 | 1.4:+84739501 | MS.gene029389:CDS |
| GTTACCAATGCTTGATGAAA+GGG | 0.459681 | 1.4:-84736477 | None:intergenic |
| GCTCGAGACTTTGCATGTTA+CGG | 0.461531 | 1.4:-84738060 | None:intergenic |
| TACATTTGAGCATTCAAAAG+TGG | 0.463005 | 1.4:-84739672 | None:intergenic |
| TTGGATGGCCTTGCACTAGA+AGG | 0.464705 | 1.4:+84739291 | MS.gene029389:CDS |
| TTTATCTAACCAAGCTGCAT+TGG | 0.464925 | 1.4:+84737607 | MS.gene029389:CDS |
| TGAACTCATCTACCTGTTGA+AGG | 0.470405 | 1.4:-84740501 | None:intergenic |
| GTAAAGCTTACCGGAGTGGC+AGG | 0.475314 | 1.4:+84740331 | MS.gene029389:CDS |
| ATCTGATACTGCTTGTGAAA+TGG | 0.475631 | 1.4:-84738143 | None:intergenic |
| GAACTGATCTTCACAGAAGA+TGG | 0.475760 | 1.4:+84739645 | MS.gene029389:CDS |
| CTAATTACTCTTCCTTCATA+CGG | 0.482371 | 1.4:+84737156 | MS.gene029389:CDS |
| TTATCTTGTTGACCTTAAGA+AGG | 0.482425 | 1.4:+84737100 | MS.gene029389:CDS |
| TTTCGCTTCTCCTTAAGAAA+CGG | 0.483756 | 1.4:+84738245 | MS.gene029389:CDS |
| GATTGTTTCTGCTAGTTGAT+CGG | 0.484105 | 1.4:-84737921 | None:intergenic |
| CTCGCCTCGATAGCTGCATC+AGG | 0.488135 | 1.4:+84738271 | MS.gene029389:CDS |
| CTTGAAATCTTACAATTGGA+TGG | 0.490444 | 1.4:+84739276 | MS.gene029389:CDS |
| CTAAGAGATGACAGTGACTA+AGG | 0.496173 | 1.4:-84738330 | None:intergenic |
| TCACTCTCAGTGATAAGCTC+CGG | 0.496299 | 1.4:+84736522 | MS.gene029389:CDS |
| ATCAGATAAACAAAGACCTC+TGG | 0.497074 | 1.4:+84739545 | MS.gene029389:CDS |
| CAAAGAGATTTCAGATCTTG+AGG | 0.497575 | 1.4:+84737559 | MS.gene029389:CDS |
| ATACTTCTGAGCTAGTAACT+TGG | 0.498432 | 1.4:+84738200 | MS.gene029389:CDS |
| TTTGGATATGGAGGAGAAAG+GGG | 0.499912 | 1.4:+84739695 | MS.gene029389:CDS |
| CTACAGGGCTAGATCCCAAC+AGG | 0.500114 | 1.4:+84741062 | MS.gene029389:CDS |
| TTGGTTCATGGTTTAGCAGA+AGG | 0.500660 | 1.4:+84737626 | MS.gene029389:CDS |
| TATTTGGATATGGAGGAGAA+AGG | 0.501650 | 1.4:+84739693 | MS.gene029389:CDS |
| TTTGGAAGCAACATAGGCAC+TGG | 0.503568 | 1.4:-84736570 | None:intergenic |
| TCAACAAACCACTCATCCTC+TGG | 0.505796 | 1.4:-84741582 | None:intergenic |
| CCGTTCCCCGAGTTGATGGT+TGG | 0.508728 | 1.4:-84737946 | None:intergenic |
| ACGAGATAAGTAACGACCTT+GGG | 0.509314 | 1.4:-84740984 | None:intergenic |
| TCCTTCCTCTAAAGCTACCA+TGG | 0.511148 | 1.4:-84737801 | None:intergenic |
| ACATTTGAGCATTCAAAAGT+GGG | 0.512082 | 1.4:-84739671 | None:intergenic |
| CACTCTCAGTGATAAGCTCC+GGG | 0.515701 | 1.4:+84736523 | MS.gene029389:CDS |
| AGGGTGTCAACTCGGTTCCT+TGG | 0.517258 | 1.4:+84737646 | MS.gene029389:CDS |
| CATTGCATCAGATGTATTTG+TGG | 0.517401 | 1.4:+84740354 | MS.gene029389:CDS |
| CTTCTGTGAAGATCAGTTCA+AGG | 0.518612 | 1.4:-84739641 | None:intergenic |
| TGAGCACTGATTGAAAGCTT+AGG | 0.519082 | 1.4:-84738565 | None:intergenic |
| CTAACTCCTCCATAAGTTGT+CGG | 0.519620 | 1.4:-84738082 | None:intergenic |
| TTCTCAGTGACAGCTGAACC+TGG | 0.521769 | 1.4:-84739363 | None:intergenic |
| GCGAGATTTGGAAGCAACAT+AGG | 0.526425 | 1.4:-84736576 | None:intergenic |
| ATCAGATGTATTTGTGGGAA+GGG | 0.529411 | 1.4:+84740360 | MS.gene029389:CDS |
| CTTGATGAAAGGGATCCTCT+TGG | 0.531833 | 1.4:-84736467 | None:intergenic |
| ATGTATTTGTGGGAAGGGAA+AGG | 0.531950 | 1.4:+84740365 | MS.gene029389:CDS |
| CAATCTGCCAACCATCAACT+CGG | 0.533197 | 1.4:+84737939 | MS.gene029389:CDS |
| AAAGAGATTTCAGATCTTGA+GGG | 0.537696 | 1.4:+84737560 | MS.gene029389:CDS |
| ATTGCATCAGATGTATTTGT+GGG | 0.540297 | 1.4:+84740355 | MS.gene029389:CDS |
| CACTGATTGAAAGCTTAGGC+TGG | 0.540514 | 1.4:-84738561 | None:intergenic |
| TTCAGTTCACGCTGTTCCAG+AGG | 0.543328 | 1.4:-84739561 | None:intergenic |
| TTAAGTGCTTGCTCAACAAA+TGG | 0.544583 | 1.4:-84738400 | None:intergenic |
| TACTTCTGAGCTAGTAACTT+GGG | 0.545379 | 1.4:+84738201 | MS.gene029389:CDS |
| GGATCCCTTTCATCAAGCAT+TGG | 0.546195 | 1.4:+84736473 | MS.gene029389:CDS |
| TGGTTCATGGTTTAGCAGAA+GGG | 0.546446 | 1.4:+84737627 | MS.gene029389:CDS |
| AACATAGGCACTGGGATCAA+AGG | 0.548125 | 1.4:-84736561 | None:intergenic |
| TATATATGTGTGTACCTGTT+GGG | 0.549100 | 1.4:-84741076 | None:intergenic |
| GACGAGATAAGTAACGACCT+TGG | 0.550631 | 1.4:-84740985 | None:intergenic |
| CATCAGATGTATTTGTGGGA+AGG | 0.550806 | 1.4:+84740359 | MS.gene029389:CDS |
| CAACTCGGTTCCTTGGTGAC+CGG | 0.553889 | 1.4:+84737653 | MS.gene029389:CDS |
| AGTTACCAATGCTTGATGAA+AGG | 0.554812 | 1.4:-84736478 | None:intergenic |
| AACCATGAACCAATGCAGCT+TGG | 0.558664 | 1.4:-84737616 | None:intergenic |
| TGACATAGAAATTAAACACT+TGG | 0.558914 | 1.4:-84739320 | None:intergenic |
| AATCTGCCAACCATCAACTC+GGG | 0.563979 | 1.4:+84737940 | MS.gene029389:CDS |
| CAAACTCCTTTGGGTCCTCT+CGG | 0.564635 | 1.4:+84740478 | MS.gene029389:CDS |
| TGTCATCTCTTAGAGGCTAG+TGG | 0.567934 | 1.4:+84738340 | MS.gene029389:CDS |
| ACTAGCTCAGAAGTATATGC+AGG | 0.571093 | 1.4:-84738193 | None:intergenic |
| ACTGAGAATCTAGAAAGCAC+AGG | 0.575033 | 1.4:+84739378 | MS.gene029389:CDS |
| GATCTGTACTCACCGTATGA+AGG | 0.576546 | 1.4:-84737168 | None:intergenic |
| GAAAAGAGTGGATGAATCCA+TGG | 0.577713 | 1.4:+84737784 | MS.gene029389:CDS |
| GTGTCTTGCCAGAGGATGAG+TGG | 0.578329 | 1.4:+84741574 | MS.gene029389:intron |
| TCAGACGATCAACTTCGCGC+TGG | 0.582613 | 1.4:-84739593 | None:intergenic |
| TTATGCTCGGGCTGATCAAG+TGG | 0.586669 | 1.4:-84741679 | None:intergenic |
| GATCCTCTTGGAGTCGTGAA+AGG | 0.587148 | 1.4:-84736455 | None:intergenic |
| CTGTTGATAAATGCAATGCC+AGG | 0.589521 | 1.4:+84739345 | MS.gene029389:CDS |
| CCAACCATCAACTCGGGGAA+CGG | 0.591579 | 1.4:+84737946 | MS.gene029389:CDS |
| ATCGTCCTCTACATTGTCAA+AGG | 0.593246 | 1.4:-84741646 | None:intergenic |
| ACCTCCTGATGCAGCTATCG+AGG | 0.595434 | 1.4:-84738275 | None:intergenic |
| TGATGCAATGCCTGCCACTC+CGG | 0.596969 | 1.4:-84740341 | None:intergenic |
| TTCTGTGAAGATCAGTTCAA+GGG | 0.600400 | 1.4:-84739640 | None:intergenic |
| TCGATGCTGTTGCTGCTACA+GGG | 0.603134 | 1.4:+84741047 | MS.gene029389:CDS |
| TCCATGGTAGCTTTAGAGGA+AGG | 0.604289 | 1.4:+84737800 | MS.gene029389:CDS |
| TCTCTTAGAGGCTAGTGGAA+TGG | 0.605218 | 1.4:+84738345 | MS.gene029389:CDS |
| CTAAAATGTTTAAGTAACAC+AGG | 0.606071 | 1.4:-84738376 | None:intergenic |
| CGGAAACGAAGATTCAGACA+TGG | 0.607458 | 1.4:+84737673 | MS.gene029389:CDS |
| TCAAATGTATTTGGATATGG+AGG | 0.609186 | 1.4:+84739686 | MS.gene029389:CDS |
| ATCTCGCAGCATGAACGAGA+AGG | 0.613434 | 1.4:+84736592 | MS.gene029389:CDS |
| AGAAAGGGGAGATACCTGAA+TGG | 0.616037 | 1.4:+84739709 | MS.gene029389:CDS |
| AACTAGAATAAGAAGAAACA+GGG | 0.616173 | 1.4:-84738528 | None:intergenic |
| GGTGAAGTCCTTCTAGTGCA+AGG | 0.617281 | 1.4:-84739299 | None:intergenic |
| TAACTATAAAGATGATAACT+GGG | 0.625636 | 1.4:+84741616 | MS.gene029389:CDS |
| TCACCTTTCACGACTCCAAG+AGG | 0.627948 | 1.4:+84736452 | MS.gene029389:CDS |
| GTCCTCTACATTGTCAAAGG+CGG | 0.628820 | 1.4:-84741643 | None:intergenic |
| TTGCTTATGCACCAACCAGT+AGG | 0.635236 | 1.4:+84738485 | MS.gene029389:CDS |
| AATAAGAAGAAACAGGGCGT+AGG | 0.640883 | 1.4:-84738522 | None:intergenic |
| TTAGCAGAAGGGTGTCAACT+CGG | 0.642019 | 1.4:+84737638 | MS.gene029389:CDS |
| GCCTCGATAGCTGCATCAGG+AGG | 0.642479 | 1.4:+84738274 | MS.gene029389:CDS |
| ATCTTCGTTTCCGGTCACCA+AGG | 0.643279 | 1.4:-84737663 | None:intergenic |
| GGGAACGGAGATTCGATCAA+CGG | 0.647088 | 1.4:+84737961 | MS.gene029389:CDS |
| ATGGCTAAAGAAATTAAACA+AGG | 0.647355 | 1.4:+84737830 | MS.gene029389:CDS |
| AGCCGCCTTTGACAATGTAG+AGG | 0.649326 | 1.4:+84741641 | MS.gene029389:CDS |
| CTGAGAATCTAGAAAGCACA+GGG | 0.650643 | 1.4:+84739379 | MS.gene029389:CDS |
| TATGCTCGGGCTGATCAAGT+GGG | 0.651352 | 1.4:-84741678 | None:intergenic |
| CTCGAGCCGACAACTTATGG+AGG | 0.651664 | 1.4:+84738076 | MS.gene029389:CDS |
| TTGGAAGCAACATAGGCACT+GGG | 0.653116 | 1.4:-84736569 | None:intergenic |
| CCTATTGGCTGAGAAAAGAG+TGG | 0.653524 | 1.4:+84737772 | MS.gene029389:CDS |
| TGGCTAAAGAAATTAAACAA+GGG | 0.659812 | 1.4:+84737831 | MS.gene029389:CDS |
| ATCTGCCAACCATCAACTCG+GGG | 0.662351 | 1.4:+84737941 | MS.gene029389:CDS |
| AGAAGTAGCGTATGAGCACG+AGG | 0.667862 | 1.4:-84738013 | None:intergenic |
| TGAAGGCCGAGAGGACCCAA+AGG | 0.674552 | 1.4:-84740484 | None:intergenic |
| TCTACCTGTTGAAGGCCGAG+AGG | 0.701377 | 1.4:-84740493 | None:intergenic |
| GAATGACAGTGTCTTGCCAG+AGG | 0.707165 | 1.4:+84741566 | MS.gene029389:intron |
| GAAAGTTTGATTACAGCACG+CGG | 0.737041 | 1.4:-84739486 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATCTATTATTATTATCA+TGG | - | chr1.4:84738714-84738733 | None:intergenic | 10.0% |
| !! | ATATCTATTATTATTATCAT+GGG | - | chr1.4:84738713-84738732 | None:intergenic | 10.0% |
| !!! | TTTCTGATTATAATTTTAAT+TGG | - | chr1.4:84741412-84741431 | None:intergenic | 10.0% |
| !! | AAAATTATGATTACGAAATT+TGG | + | chr1.4:84737350-84737369 | MS.gene029389:intron | 15.0% |
| !! | ATATATCAAAAACAGAAAAA+TGG | + | chr1.4:84737720-84737739 | MS.gene029389:CDS | 15.0% |
| !! | TATTAAAAACATTATTGGAA+GGG | + | chr1.4:84741021-84741040 | MS.gene029389:CDS | 15.0% |
| !!! | AAAAGTATTTGGATATATTT+TGG | + | chr1.4:84740751-84740770 | MS.gene029389:intron | 15.0% |
| !!! | ATCTTTCTTTTTATACTATT+AGG | + | chr1.4:84739031-84739050 | MS.gene029389:intron | 15.0% |
| !!! | GAAAAAATTGTAAAAGTATT+TGG | + | chr1.4:84740740-84740759 | MS.gene029389:intron | 15.0% |
| !!! | TGAATATATGTTTTTTTGAA+TGG | + | chr1.4:84740071-84740090 | MS.gene029389:intron | 15.0% |
| !! | AAATTATTTAATAGTGAGTC+TGG | - | chr1.4:84740921-84740940 | None:intergenic | 20.0% |
| !! | AAGATATTCATATAAGTGAA+AGG | + | chr1.4:84736842-84736861 | MS.gene029389:intron | 20.0% |
| !! | AGAAAGCAATATAAAAACAA+TGG | + | chr1.4:84741378-84741397 | MS.gene029389:intron | 20.0% |
| !! | AGGAATAGAATCATATATTA+GGG | + | chr1.4:84739051-84739070 | MS.gene029389:intron | 20.0% |
| !! | AGTTGAATTTAGAAACTTAA+TGG | + | chr1.4:84740602-84740621 | MS.gene029389:intron | 20.0% |
| !! | ATAACTATAAAGATGATAAC+TGG | + | chr1.4:84741615-84741634 | MS.gene029389:CDS | 20.0% |
| !! | ATATATGATGCATAAGAATT+TGG | - | chr1.4:84737281-84737300 | None:intergenic | 20.0% |
| !! | CAAGCTATTAAAAACATTAT+TGG | + | chr1.4:84741016-84741035 | MS.gene029389:CDS | 20.0% |
| !! | CTATTAAAAACATTATTGGA+AGG | + | chr1.4:84741020-84741039 | MS.gene029389:CDS | 20.0% |
| !! | TAACTATAAAGATGATAACT+GGG | + | chr1.4:84741616-84741635 | MS.gene029389:CDS | 20.0% |
| !! | TAATCAAATGAAAGCAAAAA+GGG | - | chr1.4:84737014-84737033 | None:intergenic | 20.0% |
| !! | TAGGAATAGAATCATATATT+AGG | + | chr1.4:84739050-84739069 | MS.gene029389:intron | 20.0% |
| !! | TCAATATTTGCATTGTTTAT+AGG | + | chr1.4:84737058-84737077 | MS.gene029389:intron | 20.0% |
| !! | TTAATCAAATGAAAGCAAAA+AGG | - | chr1.4:84737015-84737034 | None:intergenic | 20.0% |
| !!! | ATTGTTTTTATATTGCTTTC+TGG | - | chr1.4:84741379-84741398 | None:intergenic | 20.0% |
| !!! | CATTTTCTATATTATTGTTC+AGG | + | chr1.4:84740300-84740319 | MS.gene029389:intron | 20.0% |
| !!! | CTATTTTGTAAAATTATTGC+AGG | + | chr1.4:84738841-84738860 | MS.gene029389:intron | 20.0% |
| !!! | TACTTTAATTCTCTAAAGTA+TGG | - | chr1.4:84736892-84736911 | None:intergenic | 20.0% |
| !!! | TTAAGGATTTTATTCTTTGT+TGG | - | chr1.4:84739177-84739196 | None:intergenic | 20.0% |
| !!! | TTGAGTTTTTGATAAATAAC+TGG | + | chr1.4:84740660-84740679 | MS.gene029389:intron | 20.0% |
| !!! | TTTGTGATTTAAAGCAATTT+TGG | + | chr1.4:84740536-84740555 | MS.gene029389:intron | 20.0% |
| !!! | TTTTTGCTTTCATTTGATTA+AGG | + | chr1.4:84737014-84737033 | MS.gene029389:intron | 20.0% |
| ! | AAAACAGAAAAATGGCTAAT+AGG | + | chr1.4:84737728-84737747 | MS.gene029389:CDS | 25.0% |
| ! | AAACTAGAATAAGAAGAAAC+AGG | - | chr1.4:84738532-84738551 | None:intergenic | 25.0% |
| ! | AACTAGAATAAGAAGAAACA+GGG | - | chr1.4:84738531-84738550 | None:intergenic | 25.0% |
| ! | AGAGAATCAGAAATTCAATT+AGG | + | chr1.4:84739134-84739153 | MS.gene029389:intron | 25.0% |
| ! | ATATTCACACAAGAAAGAAA+AGG | - | chr1.4:84739228-84739247 | None:intergenic | 25.0% |
| ! | ATGGCTAAAGAAATTAAACA+AGG | + | chr1.4:84737830-84737849 | MS.gene029389:CDS | 25.0% |
| ! | ATGTCACAACTTGATAAAAA+GGG | + | chr1.4:84736690-84736709 | MS.gene029389:intron | 25.0% |
| ! | CACTTATATGAATATCTTCT+AGG | - | chr1.4:84736840-84736859 | None:intergenic | 25.0% |
| ! | CATTACATAAAAATGGAAAG+GGG | - | chr1.4:84739205-84739224 | None:intergenic | 25.0% |
| ! | CTAAAATGTTTAAGTAACAC+AGG | - | chr1.4:84738379-84738398 | None:intergenic | 25.0% |
| ! | GATACATTCAATAACTTCTA+TGG | - | chr1.4:84740189-84740208 | None:intergenic | 25.0% |
| ! | GCATTACATAAAAATGGAAA+GGG | - | chr1.4:84739206-84739225 | None:intergenic | 25.0% |
| ! | TAATAGTTTACTCCTTCATA+GGG | + | chr1.4:84740121-84740140 | MS.gene029389:intron | 25.0% |
| ! | TATAGCTTAAAATAGCATTG+TGG | + | chr1.4:84741095-84741114 | MS.gene029389:intron | 25.0% |
| ! | TCAGATTAATTCAATGAGTT+AGG | + | chr1.4:84736728-84736747 | MS.gene029389:intron | 25.0% |
| ! | TCTTATGCATCATATATGAA+GGG | + | chr1.4:84737284-84737303 | MS.gene029389:intron | 25.0% |
| ! | TCTTTCTTGTGTGAATATAT+AGG | + | chr1.4:84739230-84739249 | MS.gene029389:intron | 25.0% |
| ! | TGACATAGAAATTAAACACT+TGG | - | chr1.4:84739323-84739342 | None:intergenic | 25.0% |
| ! | TGGCTAAAGAAATTAAACAA+GGG | + | chr1.4:84737831-84737850 | MS.gene029389:CDS | 25.0% |
| ! | TGTTTGTTTACCTGAAAAAT+TGG | - | chr1.4:84739744-84739763 | None:intergenic | 25.0% |
| ! | TTAATAGTTTACTCCTTCAT+AGG | + | chr1.4:84740120-84740139 | MS.gene029389:intron | 25.0% |
| ! | TTATCGAACAAACATTAATC+AGG | + | chr1.4:84741307-84741326 | MS.gene029389:intron | 25.0% |
| ! | TTCAAAGAATACAACATGTT+TGG | - | chr1.4:84741455-84741474 | None:intergenic | 25.0% |
| ! | TTCTTATGCATCATATATGA+AGG | + | chr1.4:84737283-84737302 | MS.gene029389:intron | 25.0% |
| ! | TTTGAATGCTCAAATGTATT+TGG | + | chr1.4:84739677-84739696 | MS.gene029389:CDS | 25.0% |
| !! | CAACATCATTCACATTTTTA+AGG | - | chr1.4:84736788-84736807 | None:intergenic | 25.0% |
| !! | TTTTGATAAATAACTGGACA+TGG | + | chr1.4:84740666-84740685 | MS.gene029389:intron | 25.0% |
| !!! | AAGAATTTTGTTTCTGTTTG+AGG | - | chr1.4:84740818-84740837 | None:intergenic | 25.0% |
| !!! | AAGCTTGAGTATTGAAAATA+AGG | + | chr1.4:84740570-84740589 | MS.gene029389:intron | 25.0% |
| !!! | AATACTGAGGTTTTAAGTAA+AGG | - | chr1.4:84737495-84737514 | None:intergenic | 25.0% |
| !!! | ATAATTTGTGCAGCTTTATT+TGG | + | chr1.4:84740934-84740953 | MS.gene029389:intron | 25.0% |
| !!! | ATCATTCACATTTTTAAGGA+CGG | - | chr1.4:84736784-84736803 | None:intergenic | 25.0% |
| !!! | GAAAAGGCATTACATAAAAA+TGG | - | chr1.4:84739212-84739231 | None:intergenic | 25.0% |
| !!! | TGAATGATGTTGTGTTTTTA+AGG | + | chr1.4:84736796-84736815 | MS.gene029389:intron | 25.0% |
| !!! | TTTTTCAGGTAAACAAACAA+AGG | + | chr1.4:84739745-84739764 | MS.gene029389:intron | 25.0% |
| AAACTTTCACATAGCACAAA+AGG | + | chr1.4:84739501-84739520 | MS.gene029389:CDS | 30.0% | |
| AAAGAGATTTCAGATCTTGA+GGG | + | chr1.4:84737560-84737579 | MS.gene029389:CDS | 30.0% | |
| AAATCCTTATTATCACTAGG+TGG | + | chr1.4:84738927-84738946 | MS.gene029389:intron | 30.0% | |
| AATCCTTATTATCACTAGGT+GGG | + | chr1.4:84738928-84738947 | MS.gene029389:intron | 30.0% | |
| ACAGACCAAAATTCACAAAA+AGG | - | chr1.4:84737322-84737341 | None:intergenic | 30.0% | |
| ACATTCAATAACTTCTATGG+AGG | - | chr1.4:84740186-84740205 | None:intergenic | 30.0% | |
| ACATTTGAGCATTCAAAAGT+GGG | - | chr1.4:84739674-84739693 | None:intergenic | 30.0% | |
| ACCAAATCCTTATTATCACT+AGG | + | chr1.4:84738924-84738943 | MS.gene029389:intron | 30.0% | |
| ACCAGTAGGAATAATAATAC+TGG | + | chr1.4:84738499-84738518 | MS.gene029389:CDS | 30.0% | |
| ACCTAGTGATAATAAGGATT+TGG | - | chr1.4:84738928-84738947 | None:intergenic | 30.0% | |
| ACTACTATCACTATGCTTAT+AGG | - | chr1.4:84739852-84739871 | None:intergenic | 30.0% | |
| ATTGCATCAGATGTATTTGT+GGG | + | chr1.4:84740355-84740374 | MS.gene029389:CDS | 30.0% | |
| CAAAATTCACAAAAAGGCAA+TGG | - | chr1.4:84737316-84737335 | None:intergenic | 30.0% | |
| CAATGTGTTAGACAATGTTA+TGG | + | chr1.4:84736977-84736996 | MS.gene029389:intron | 30.0% | |
| CATGTCACAACTTGATAAAA+AGG | + | chr1.4:84736689-84736708 | MS.gene029389:intron | 30.0% | |
| CTAATTACTCTTCCTTCATA+CGG | + | chr1.4:84737156-84737175 | MS.gene029389:CDS | 30.0% | |
| CTTGAAATCTTACAATTGGA+TGG | + | chr1.4:84739276-84739295 | MS.gene029389:CDS | 30.0% | |
| GACACTTGAAATCTTACAAT+TGG | + | chr1.4:84739272-84739291 | MS.gene029389:CDS | 30.0% | |
| GGCATTACATAAAAATGGAA+AGG | - | chr1.4:84739207-84739226 | None:intergenic | 30.0% | |
| GTATTATTATTCCTACTGGT+TGG | - | chr1.4:84738499-84738518 | None:intergenic | 30.0% | |
| GTGAAATGGTTGAAAAAACA+AGG | - | chr1.4:84738132-84738151 | None:intergenic | 30.0% | |
| GTTAGATAAAAGGTTTCTCA+TGG | - | chr1.4:84737597-84737616 | None:intergenic | 30.0% | |
| GTTTCAAATAGCAAATACTG+AGG | - | chr1.4:84737508-84737527 | None:intergenic | 30.0% | |
| TACATTTGAGCATTCAAAAG+TGG | - | chr1.4:84739675-84739694 | None:intergenic | 30.0% | |
| TAGAAACAACTTTATGCAAG+AGG | - | chr1.4:84737201-84737220 | None:intergenic | 30.0% | |
| TATATATGTGTGTACCTGTT+GGG | - | chr1.4:84741079-84741098 | None:intergenic | 30.0% | |
| TCAAATGTATTTGGATATGG+AGG | + | chr1.4:84739686-84739705 | MS.gene029389:CDS | 30.0% | |
| TGCATAAGAATTTGGAAATG+TGG | - | chr1.4:84737273-84737292 | None:intergenic | 30.0% | |
| TGCTCAAATGTATTTGGATA+TGG | + | chr1.4:84739683-84739702 | MS.gene029389:CDS | 30.0% | |
| TTATCTTGTTGACCTTAAGA+AGG | + | chr1.4:84737100-84737119 | MS.gene029389:CDS | 30.0% | |
| TTGAATGTATCCACATAAGT+TGG | + | chr1.4:84740198-84740217 | MS.gene029389:intron | 30.0% | |
| TTTAATGTAACTGCATGTGT+TGG | - | chr1.4:84738815-84738834 | None:intergenic | 30.0% | |
| TTTACCTGAAAAATTGGAGA+AGG | - | chr1.4:84739738-84739757 | None:intergenic | 30.0% | |
| TTTAGAGGAAGGAGAAAAAA+TGG | + | chr1.4:84737811-84737830 | MS.gene029389:CDS | 30.0% | |
| TTTGAATGTATTGCATGCAT+TGG | + | chr1.4:84739957-84739976 | MS.gene029389:intron | 30.0% | |
| ! | AAGCTTTCAATTTGAAGTGA+CGG | - | chr1.4:84738772-84738791 | None:intergenic | 30.0% |
| ! | CATTGCCTTTTTGTGAATTT+TGG | + | chr1.4:84737314-84737333 | MS.gene029389:intron | 30.0% |
| ! | TATTATTATCATGGGCTACT+TGG | - | chr1.4:84738705-84738724 | None:intergenic | 30.0% |
| ! | TTTTGAATGGCAAATGCTAT+TGG | + | chr1.4:84740084-84740103 | MS.gene029389:intron | 30.0% |
| ! | TTTTTGTCTGTGTTCAGTAA+TGG | - | chr1.4:84737897-84737916 | None:intergenic | 30.0% |
| !! | ACTTGAGACAATAACTTGTT+CGG | + | chr1.4:84741213-84741232 | MS.gene029389:intron | 30.0% |
| !! | ATTCAATTAGGTTGAAAGTG+AGG | + | chr1.4:84739146-84739165 | MS.gene029389:intron | 30.0% |
| !! | ATTGCATAGGGAAAAGTATT+TGG | - | chr1.4:84740163-84740182 | None:intergenic | 30.0% |
| !! | CTTTTTATCAAGTTGTGACA+TGG | - | chr1.4:84736691-84736710 | None:intergenic | 30.0% |
| AAGGAGAAGCGAAAAAGTTT+CGG | - | chr1.4:84738239-84738258 | None:intergenic | 35.0% | |
| AAGTGTAGAGCTATAACCAA+AGG | - | chr1.4:84739784-84739803 | None:intergenic | 35.0% | |
| ACACATTGCATAAGAAGACA+TGG | - | chr1.4:84736965-84736984 | None:intergenic | 35.0% | |
| AGTTACCAATGCTTGATGAA+AGG | - | chr1.4:84736481-84736500 | None:intergenic | 35.0% | |
| ATACTTCTGAGCTAGTAACT+TGG | + | chr1.4:84738200-84738219 | MS.gene029389:CDS | 35.0% | |
| ATCAGATAAACAAAGACCTC+TGG | + | chr1.4:84739545-84739564 | MS.gene029389:CDS | 35.0% | |
| ATCAGATGTATTTGTGGGAA+GGG | + | chr1.4:84740360-84740379 | MS.gene029389:CDS | 35.0% | |
| ATCTGATACTGCTTGTGAAA+TGG | - | chr1.4:84738146-84738165 | None:intergenic | 35.0% | |
| ATGAGTTAGGTAAGATCACA+CGG | + | chr1.4:84736741-84736760 | MS.gene029389:intron | 35.0% | |
| ATGCAGCTTGGTTAGATAAA+AGG | - | chr1.4:84737607-84737626 | None:intergenic | 35.0% | |
| ATGTCTTCGATATGAAGTCT+CGG | + | chr1.4:84740253-84740272 | MS.gene029389:intron | 35.0% | |
| ATTTGGATATGGAGGAGAAA+GGG | + | chr1.4:84739694-84739713 | MS.gene029389:CDS | 35.0% | |
| CAAAGAGATTTCAGATCTTG+AGG | + | chr1.4:84737559-84737578 | MS.gene029389:CDS | 35.0% | |
| CAAATTCAACTCTATGGTTC+AGG | + | chr1.4:84738588-84738607 | MS.gene029389:CDS | 35.0% | |
| CACATTGCATAAGAAGACAT+GGG | - | chr1.4:84736964-84736983 | None:intergenic | 35.0% | |
| CATTGCATCAGATGTATTTG+TGG | + | chr1.4:84740354-84740373 | MS.gene029389:CDS | 35.0% | |
| CTATATATGTGTGTACCTGT+TGG | - | chr1.4:84741080-84741099 | None:intergenic | 35.0% | |
| GAAGCAGTAGAAAACAAACA+TGG | - | chr1.4:84741524-84741543 | None:intergenic | 35.0% | |
| GCCAGTATTATTATTCCTAC+TGG | - | chr1.4:84738503-84738522 | None:intergenic | 35.0% | |
| GCTTAAAATAGCATTGTGGA+TGG | + | chr1.4:84741099-84741118 | MS.gene029389:intron | 35.0% | |
| GTAGTATAACCTATGTGACA+TGG | + | chr1.4:84739867-84739886 | MS.gene029389:intron | 35.0% | |
| GTTACCAATGCTTGATGAAA+GGG | - | chr1.4:84736480-84736499 | None:intergenic | 35.0% | |
| TAAAGTCATAAGGACAAGGA+GGG | + | chr1.4:84741338-84741357 | MS.gene029389:intron | 35.0% | |
| TACTTCTGAGCTAGTAACTT+GGG | + | chr1.4:84738201-84738220 | MS.gene029389:CDS | 35.0% | |
| TATTTGGATATGGAGGAGAA+AGG | + | chr1.4:84739693-84739712 | MS.gene029389:CDS | 35.0% | |
| TGAAACCCTTAATGTCCTAT+TGG | + | chr1.4:84737757-84737776 | MS.gene029389:CDS | 35.0% | |
| TGCTCACAAATTCAACTCTA+TGG | + | chr1.4:84738582-84738601 | MS.gene029389:CDS | 35.0% | |
| TTAAGTGCTTGCTCAACAAA+TGG | - | chr1.4:84738403-84738422 | None:intergenic | 35.0% | |
| TTCTGTGAAGATCAGTTCAA+GGG | - | chr1.4:84739643-84739662 | None:intergenic | 35.0% | |
| TTTATCTAACCAAGCTGCAT+TGG | + | chr1.4:84737607-84737626 | MS.gene029389:CDS | 35.0% | |
| TTTCGCTTCTCCTTAAGAAA+CGG | + | chr1.4:84738245-84738264 | MS.gene029389:CDS | 35.0% | |
| ! | ATTAGCGTTGAAAAATCTGG+GGG | + | chr1.4:84737985-84738004 | MS.gene029389:CDS | 35.0% |
| ! | CATCTAAAGTCATAAGGACA+AGG | + | chr1.4:84741334-84741353 | MS.gene029389:intron | 35.0% |
| ! | CATTAGCGTTGAAAAATCTG+GGG | + | chr1.4:84737984-84738003 | MS.gene029389:CDS | 35.0% |
| ! | CTCAAGATCTGAAATCTCTT+TGG | - | chr1.4:84737561-84737580 | None:intergenic | 35.0% |
| ! | GAGCTTTTTGTAAAGCTTAC+CGG | + | chr1.4:84740322-84740341 | MS.gene029389:CDS | 35.0% |
| ! | GATTCTTTGACAGTTTTTGC+TGG | + | chr1.4:84738163-84738182 | MS.gene029389:CDS | 35.0% |
| ! | GCATTAGCGTTGAAAAATCT+GGG | + | chr1.4:84737983-84738002 | MS.gene029389:CDS | 35.0% |
| ! | GGTCATCATCTAAAGTCATA+AGG | + | chr1.4:84741328-84741347 | MS.gene029389:intron | 35.0% |
| ! | GTGATGATATTTTCATCCCA+AGG | + | chr1.4:84740968-84740987 | MS.gene029389:CDS | 35.0% |
| ! | GTTTCCTTCTCCAATTTTTC+AGG | + | chr1.4:84739731-84739750 | MS.gene029389:CDS | 35.0% |
| ! | TTCTGATGACCAAGACTTTT+GGG | + | chr1.4:84740438-84740457 | MS.gene029389:CDS | 35.0% |
| ! | TTTCTGATGACCAAGACTTT+TGG | + | chr1.4:84740437-84740456 | MS.gene029389:CDS | 35.0% |
| ! | TTTGCTATGTTCTAACAGCA+TGG | + | chr1.4:84739808-84739827 | MS.gene029389:intron | 35.0% |
| !! | AGGTAGAACTTTTGAAAACC+CGG | - | chr1.4:84736544-84736563 | None:intergenic | 35.0% |
| !! | AGTGAGTCTGGAATTGTTTT+TGG | - | chr1.4:84740909-84740928 | None:intergenic | 35.0% |
| !! | GAAAAGTATTTGGAGGTCTT+GGG | - | chr1.4:84740153-84740172 | None:intergenic | 35.0% |
| !! | GATTGTTTCTGCTAGTTGAT+CGG | - | chr1.4:84737924-84737943 | None:intergenic | 35.0% |
| !! | TATCCACATAAGTTGGTGTT+GGG | + | chr1.4:84740205-84740224 | MS.gene029389:intron | 35.0% |
| !!! | TTCCCTTGTTTTTGTTGAAC+CGG | - | chr1.4:84741241-84741260 | None:intergenic | 35.0% |
| AATAAGAAGAAACAGGGCGT+AGG | - | chr1.4:84738525-84738544 | None:intergenic | 40.0% | |
| AATGGAAAGGGGAGTGATTA+AGG | - | chr1.4:84739194-84739213 | None:intergenic | 40.0% | |
| ACACATTTGACAGTGAACCT+CGG | - | chr1.4:84737383-84737402 | None:intergenic | 40.0% | |
| ACGAGATAAGTAACGACCTT+GGG | - | chr1.4:84740987-84741006 | None:intergenic | 40.0% | |
| ACTTCTATGGAGGATTGCAT+AGG | - | chr1.4:84740176-84740195 | None:intergenic | 40.0% | |
| AGCAATATTAAGCTTGAGCG+TGG | + | chr1.4:84739099-84739118 | MS.gene029389:intron | 40.0% | |
| ATCGTCCTCTACATTGTCAA+AGG | - | chr1.4:84741649-84741668 | None:intergenic | 40.0% | |
| ATGTATTTGTGGGAAGGGAA+AGG | + | chr1.4:84740365-84740384 | MS.gene029389:CDS | 40.0% | |
| ATTGGAGAAGGAAACCATTC+AGG | - | chr1.4:84739726-84739745 | None:intergenic | 40.0% | |
| CATCAGATGTATTTGTGGGA+AGG | + | chr1.4:84740359-84740378 | MS.gene029389:CDS | 40.0% | |
| CATCCCACCTAGTGATAATA+AGG | - | chr1.4:84738934-84738953 | None:intergenic | 40.0% | |
| CATGTCTGAATCTTCGTTTC+CGG | - | chr1.4:84737675-84737694 | None:intergenic | 40.0% | |
| CTAAAGTCATAAGGACAAGG+AGG | + | chr1.4:84741337-84741356 | MS.gene029389:intron | 40.0% | |
| CTAACTCCTCCATAAGTTGT+CGG | - | chr1.4:84738085-84738104 | None:intergenic | 40.0% | |
| CTAAGAGATGACAGTGACTA+AGG | - | chr1.4:84738333-84738352 | None:intergenic | 40.0% | |
| CTCAGCCAATAGGACATTAA+GGG | - | chr1.4:84737765-84737784 | None:intergenic | 40.0% | |
| CTTATCACTGAGAGTGAGAT+TGG | - | chr1.4:84736519-84736538 | None:intergenic | 40.0% | |
| CTTATTATCACTAGGTGGGA+TGG | + | chr1.4:84738932-84738951 | MS.gene029389:intron | 40.0% | |
| CTTCTATGGAGGATTGCATA+GGG | - | chr1.4:84740175-84740194 | None:intergenic | 40.0% | |
| CTTCTGTGAAGATCAGTTCA+AGG | - | chr1.4:84739644-84739663 | None:intergenic | 40.0% | |
| GAAAAGAGTGGATGAATCCA+TGG | + | chr1.4:84737784-84737803 | MS.gene029389:CDS | 40.0% | |
| GAAACAGGACAAACTCCTTT+GGG | + | chr1.4:84740469-84740488 | MS.gene029389:CDS | 40.0% | |
| GAAAGTTTGATTACAGCACG+CGG | - | chr1.4:84739489-84739508 | None:intergenic | 40.0% | |
| GAACTGATCTTCACAGAAGA+TGG | + | chr1.4:84739645-84739664 | MS.gene029389:CDS | 40.0% | |
| GTGGATGGAAAATTATACCG+TGG | + | chr1.4:84741114-84741133 | MS.gene029389:intron | 40.0% | |
| GTTCAATGTCCATGTCACAT+AGG | - | chr1.4:84739879-84739898 | None:intergenic | 40.0% | |
| TAGTCACTGTCATCTCTTAG+AGG | + | chr1.4:84738333-84738352 | MS.gene029389:CDS | 40.0% | |
| TCTCAGCCAATAGGACATTA+AGG | - | chr1.4:84737766-84737785 | None:intergenic | 40.0% | |
| TGAAACAGGACAAACTCCTT+TGG | + | chr1.4:84740468-84740487 | MS.gene029389:CDS | 40.0% | |
| TGAACTCATCTACCTGTTGA+AGG | - | chr1.4:84740504-84740523 | None:intergenic | 40.0% | |
| TGCAAACAACTGTGAAACCA+CGG | - | chr1.4:84738663-84738682 | None:intergenic | 40.0% | |
| TGGTTCATGGTTTAGCAGAA+GGG | + | chr1.4:84737627-84737646 | MS.gene029389:CDS | 40.0% | |
| TTGCAGAAGCAGTGATACTA+TGG | + | chr1.4:84740413-84740432 | MS.gene029389:CDS | 40.0% | |
| TTGGTTCATGGTTTAGCAGA+AGG | + | chr1.4:84737626-84737645 | MS.gene029389:CDS | 40.0% | |
| TTTGGATATGGAGGAGAAAG+GGG | + | chr1.4:84739695-84739714 | MS.gene029389:CDS | 40.0% | |
| ! | ACTAGCTCAGAAGTATATGC+AGG | - | chr1.4:84738196-84738215 | None:intergenic | 40.0% |
| ! | ACTGAGAATCTAGAAAGCAC+AGG | + | chr1.4:84739378-84739397 | MS.gene029389:CDS | 40.0% |
| ! | CTAACGGCGACATTTTCTTA+TGG | + | chr1.4:84741151-84741170 | MS.gene029389:intron | 40.0% |
| ! | CTGAGAATCTAGAAAGCACA+GGG | + | chr1.4:84739379-84739398 | MS.gene029389:CDS | 40.0% |
| ! | CTGTTGATAAATGCAATGCC+AGG | + | chr1.4:84739345-84739364 | MS.gene029389:CDS | 40.0% |
| ! | GAGAAGGTATATGTGTGTGT+GGG | + | chr1.4:84736608-84736627 | MS.gene029389:intron | 40.0% |
| ! | GGCATTAGCGTTGAAAAATC+TGG | + | chr1.4:84737982-84738001 | MS.gene029389:CDS | 40.0% |
| ! | TGTATTGCATGCATTGGTGT+CGG | + | chr1.4:84739963-84739982 | MS.gene029389:intron | 40.0% |
| ! | TTTTGGGCAAACGTTGAAAC+AGG | + | chr1.4:84740454-84740473 | MS.gene029389:CDS | 40.0% |
| ! | TTTTGTAAAGCTTACCGGAG+TGG | + | chr1.4:84740327-84740346 | MS.gene029389:CDS | 40.0% |
| !! | AGGAGCTTTTTGAAGACGTA+GGG | + | chr1.4:84739250-84739269 | MS.gene029389:intron | 40.0% |
| !! | GCATAGGGAAAAGTATTTGG+AGG | - | chr1.4:84740160-84740179 | None:intergenic | 40.0% |
| !! | GGAAAAGTATTTGGAGGTCT+TGG | - | chr1.4:84740154-84740173 | None:intergenic | 40.0% |
| !! | GTATCCACATAAGTTGGTGT+TGG | + | chr1.4:84740204-84740223 | MS.gene029389:intron | 40.0% |
| !! | TAGGAGCTTTTTGAAGACGT+AGG | + | chr1.4:84739249-84739268 | MS.gene029389:intron | 40.0% |
| !! | TCGGTGCTAGATAGAGTATA+AGG | + | chr1.4:84740272-84740291 | MS.gene029389:intron | 40.0% |
| !! | TGAATCCATGGTAGCTTTAG+AGG | + | chr1.4:84737796-84737815 | MS.gene029389:CDS | 40.0% |
| !! | TGAGCACTGATTGAAAGCTT+AGG | - | chr1.4:84738568-84738587 | None:intergenic | 40.0% |
| !! | TGCCGGTTCAACAAAAACAA+GGG | + | chr1.4:84741236-84741255 | MS.gene029389:intron | 40.0% |
| !!! | TTAACCTCACTTTTTTGCCG+TGG | + | chr1.4:84738643-84738662 | MS.gene029389:intron | 40.0% |
| AACCATGAACCAATGCAGCT+TGG | - | chr1.4:84737619-84737638 | None:intergenic | 45.0% | |
| AATCTGCCAACCATCAACTC+GGG | + | chr1.4:84737940-84737959 | MS.gene029389:CDS | 45.0% | |
| AGAAAGGGGAGATACCTGAA+TGG | + | chr1.4:84739709-84739728 | MS.gene029389:CDS | 45.0% | |
| AGACTTCATATACGCGAGAG+AGG | - | chr1.4:84738992-84739011 | None:intergenic | 45.0% | |
| AGGATGCTTCATGCTTCCTT+TGG | + | chr1.4:84739765-84739784 | MS.gene029389:intron | 45.0% | |
| AGGCGAGAATCCGTTTCTTA+AGG | - | chr1.4:84738258-84738277 | None:intergenic | 45.0% | |
| CAACGTTTGCCCAAAAGTCT+TGG | - | chr1.4:84740450-84740469 | None:intergenic | 45.0% | |
| CAATCTGCCAACCATCAACT+CGG | + | chr1.4:84737939-84737958 | MS.gene029389:CDS | 45.0% | |
| CGGAAACGAAGATTCAGACA+TGG | + | chr1.4:84737673-84737692 | MS.gene029389:CDS | 45.0% | |
| CTTCTGCAGAAGCCTTCTTA+AGG | - | chr1.4:84737115-84737134 | None:intergenic | 45.0% | |
| CTTGATGAAAGGGATCCTCT+TGG | - | chr1.4:84736470-84736489 | None:intergenic | 45.0% | |
| CTTTAGCTGCTGCTGATGAT+TGG | + | chr1.4:84738458-84738477 | MS.gene029389:CDS | 45.0% | |
| GAAACCACGGCAAAAAAGTG+AGG | - | chr1.4:84738650-84738669 | None:intergenic | 45.0% | |
| GACGAGATAAGTAACGACCT+TGG | - | chr1.4:84740988-84741007 | None:intergenic | 45.0% | |
| GATCTGTACTCACCGTATGA+AGG | - | chr1.4:84737171-84737190 | None:intergenic | 45.0% | |
| GCGAGATTTGGAAGCAACAT+AGG | - | chr1.4:84736579-84736598 | None:intergenic | 45.0% | |
| GCTCGAGACTTTGCATGTTA+CGG | - | chr1.4:84738063-84738082 | None:intergenic | 45.0% | |
| GGATCCCTTTCATCAAGCAT+TGG | + | chr1.4:84736473-84736492 | MS.gene029389:CDS | 45.0% | |
| GTCCTCTACATTGTCAAAGG+CGG | - | chr1.4:84741646-84741665 | None:intergenic | 45.0% | |
| TAGAGTTTCAAAGCGGTCCA+CGG | - | chr1.4:84741134-84741153 | None:intergenic | 45.0% | |
| TCAACAAACCACTCATCCTC+TGG | - | chr1.4:84741585-84741604 | None:intergenic | 45.0% | |
| TCACTCTCAGTGATAAGCTC+CGG | + | chr1.4:84736522-84736541 | MS.gene029389:CDS | 45.0% | |
| TCGCCGTTAGAGTTTCAAAG+CGG | - | chr1.4:84741141-84741160 | None:intergenic | 45.0% | |
| TCTCTTAGAGGCTAGTGGAA+TGG | + | chr1.4:84738345-84738364 | MS.gene029389:CDS | 45.0% | |
| TGAAGACAACAATGCGCAGA+CGG | + | chr1.4:84740007-84740026 | MS.gene029389:intron | 45.0% | |
| TGTCATCTCTTAGAGGCTAG+TGG | + | chr1.4:84738340-84738359 | MS.gene029389:CDS | 45.0% | |
| TTGCTTATGCACCAACCAGT+AGG | + | chr1.4:84738485-84738504 | MS.gene029389:CDS | 45.0% | |
| TTGGAAGCAACATAGGCACT+GGG | - | chr1.4:84736572-84736591 | None:intergenic | 45.0% | |
| TTTGGAAGCAACATAGGCAC+TGG | - | chr1.4:84736573-84736592 | None:intergenic | 45.0% | |
| ! | CACTGATTGAAAGCTTAGGC+TGG | - | chr1.4:84738564-84738583 | None:intergenic | 45.0% |
| ! | CCACTCTTTTCTCAGCCAAT+AGG | - | chr1.4:84737775-84737794 | None:intergenic | 45.0% |
| ! | CCTATTGGCTGAGAAAAGAG+TGG | + | chr1.4:84737772-84737791 | MS.gene029389:CDS | 45.0% |
| ! | CGAGAAGGTATATGTGTGTG+TGG | + | chr1.4:84736607-84736626 | MS.gene029389:intron | 45.0% |
| !! | AACATAGGCACTGGGATCAA+AGG | - | chr1.4:84736564-84736583 | None:intergenic | 45.0% |
| !! | AACCAAGCTGCATTGGTTCA+TGG | + | chr1.4:84737614-84737633 | MS.gene029389:CDS | 45.0% |
| !! | CGAAATTTGGCTTTCTTCCG+AGG | + | chr1.4:84737363-84737382 | MS.gene029389:intron | 45.0% |
| !! | GACAATAACTTGTTCGGTGC+CGG | + | chr1.4:84741219-84741238 | MS.gene029389:intron | 45.0% |
| !! | GGACCGCTTTGAAACTCTAA+CGG | + | chr1.4:84741135-84741154 | MS.gene029389:intron | 45.0% |
| !! | GTGCCGGTTCAACAAAAACA+AGG | + | chr1.4:84741235-84741254 | MS.gene029389:intron | 45.0% |
| !! | TCCATGGTAGCTTTAGAGGA+AGG | + | chr1.4:84737800-84737819 | MS.gene029389:CDS | 45.0% |
| !! | TCCTTCCTCTAAAGCTACCA+TGG | - | chr1.4:84737804-84737823 | None:intergenic | 45.0% |
| !! | TTAGCAGAAGGGTGTCAACT+CGG | + | chr1.4:84737638-84737657 | MS.gene029389:CDS | 45.0% |
| AGAAGTAGCGTATGAGCACG+AGG | - | chr1.4:84738016-84738035 | None:intergenic | 50.0% | |
| AGCCGCCTTTGACAATGTAG+AGG | + | chr1.4:84741641-84741660 | MS.gene029389:CDS | 50.0% | |
| AGCTTGAGCGTGGTATGACT+TGG | + | chr1.4:84739109-84739128 | MS.gene029389:intron | 50.0% | |
| AGTCTCGAGCCGACAACTTA+TGG | + | chr1.4:84738073-84738092 | MS.gene029389:CDS | 50.0% | |
| ATCGATGCTGTTGCTGCTAC+AGG | + | chr1.4:84741046-84741065 | MS.gene029389:CDS | 50.0% | |
| ATCTCGCAGCATGAACGAGA+AGG | + | chr1.4:84736592-84736611 | MS.gene029389:CDS | 50.0% | |
| ATCTGCCAACCATCAACTCG+GGG | + | chr1.4:84737941-84737960 | MS.gene029389:CDS | 50.0% | |
| ATCTTCGTTTCCGGTCACCA+AGG | - | chr1.4:84737666-84737685 | None:intergenic | 50.0% | |
| CAAACTCCTTTGGGTCCTCT+CGG | + | chr1.4:84740478-84740497 | MS.gene029389:CDS | 50.0% | |
| CACAGTTCTTCCTGTCCTCA+TGG | + | chr1.4:84741185-84741204 | MS.gene029389:intron | 50.0% | |
| CACTCTCAGTGATAAGCTCC+GGG | + | chr1.4:84736523-84736542 | MS.gene029389:CDS | 50.0% | |
| CTCCAGAGCAAACTCAACTG+AGG | - | chr1.4:84737414-84737433 | None:intergenic | 50.0% | |
| CTCGTTCATGCTGCGAGATT+TGG | - | chr1.4:84736591-84736610 | None:intergenic | 50.0% | |
| CTTGGGTTCAAGCCCTATGA+AGG | - | chr1.4:84740136-84740155 | None:intergenic | 50.0% | |
| GAATGACAGTGTCTTGCCAG+AGG | + | chr1.4:84741566-84741585 | MS.gene029389:intron | 50.0% | |
| GATCCTCTTGGAGTCGTGAA+AGG | - | chr1.4:84736458-84736477 | None:intergenic | 50.0% | |
| GCGTTGAAAAATCTGGGGGA+CGG | + | chr1.4:84737989-84738008 | MS.gene029389:CDS | 50.0% | |
| GGGAACGGAGATTCGATCAA+CGG | + | chr1.4:84737961-84737980 | MS.gene029389:CDS | 50.0% | |
| GGTGAAGTCCTTCTAGTGCA+AGG | - | chr1.4:84739302-84739321 | None:intergenic | 50.0% | |
| GTGCCCAACACCAACTTATG+TGG | - | chr1.4:84740211-84740230 | None:intergenic | 50.0% | |
| TCACCTTTCACGACTCCAAG+AGG | + | chr1.4:84736452-84736471 | MS.gene029389:CDS | 50.0% | |
| TCGATGCTGTTGCTGCTACA+GGG | + | chr1.4:84741047-84741066 | MS.gene029389:CDS | 50.0% | |
| TGAGGACAGGAAGAACTGTG+AGG | - | chr1.4:84741185-84741204 | None:intergenic | 50.0% | |
| TGTCTCAAGTCTCGACCATG+AGG | - | chr1.4:84741203-84741222 | None:intergenic | 50.0% | |
| TTCAGTTCACGCTGTTCCAG+AGG | - | chr1.4:84739564-84739583 | None:intergenic | 50.0% | |
| TTCTCAGTGACAGCTGAACC+TGG | - | chr1.4:84739366-84739385 | None:intergenic | 50.0% | |
| ! | ATCATGGGCTACTTGGCAGT+GGG | - | chr1.4:84738698-84738717 | None:intergenic | 50.0% |
| ! | TATCATGGGCTACTTGGCAG+TGG | - | chr1.4:84738699-84738718 | None:intergenic | 50.0% |
| ! | TGCCTCAGTTGAGTTTGCTC+TGG | + | chr1.4:84737409-84737428 | MS.gene029389:intron | 50.0% |
| ! | TTGGATGGCCTTGCACTAGA+AGG | + | chr1.4:84739291-84739310 | MS.gene029389:CDS | 50.0% |
| ACCTCCTGATGCAGCTATCG+AGG | - | chr1.4:84738278-84738297 | None:intergenic | 55.0% | |
| ATATGTGTGTGTGGGCGCGT+GGG | + | chr1.4:84736616-84736635 | MS.gene029389:intron | 55.0% | |
| CAAGTCTCGACCATGAGGAC+AGG | - | chr1.4:84741198-84741217 | None:intergenic | 55.0% | |
| CCAACCATCAACTCGGGGAA+CGG | + | chr1.4:84737946-84737965 | MS.gene029389:CDS | 55.0% | |
| CTACAGGGCTAGATCCCAAC+AGG | + | chr1.4:84741062-84741081 | MS.gene029389:CDS | 55.0% | |
| CTCGAGCCGACAACTTATGG+AGG | + | chr1.4:84738076-84738095 | MS.gene029389:CDS | 55.0% | |
| GTAAAGCTTACCGGAGTGGC+AGG | + | chr1.4:84740331-84740350 | MS.gene029389:CDS | 55.0% | |
| GTGTCTTGCCAGAGGATGAG+TGG | + | chr1.4:84741574-84741593 | MS.gene029389:intron | 55.0% | |
| TATATGTGTGTGTGGGCGCG+TGG | + | chr1.4:84736615-84736634 | MS.gene029389:intron | 55.0% | |
| TCAGACGATCAACTTCGCGC+TGG | - | chr1.4:84739596-84739615 | None:intergenic | 55.0% | |
| TCTACCTGTTGAAGGCCGAG+AGG | - | chr1.4:84740496-84740515 | None:intergenic | 55.0% | |
| TGATGCAATGCCTGCCACTC+CGG | - | chr1.4:84740344-84740363 | None:intergenic | 55.0% | |
| ! | AGGGTGTCAACTCGGTTCCT+TGG | + | chr1.4:84737646-84737665 | MS.gene029389:CDS | 55.0% |
| ! | ATCTCCGTTCCCCGAGTTGA+TGG | - | chr1.4:84737953-84737972 | None:intergenic | 55.0% |
| ! | CAACTCGGTTCCTTGGTGAC+CGG | + | chr1.4:84737653-84737672 | MS.gene029389:CDS | 55.0% |
| !! | GCATGCATTGGTGTCGGACA+TGG | + | chr1.4:84739969-84739988 | MS.gene029389:intron | 55.0% |
| CTCGCCTCGATAGCTGCATC+AGG | + | chr1.4:84738271-84738290 | MS.gene029389:CDS | 60.0% | |
| GCCTCGATAGCTGCATCAGG+AGG | + | chr1.4:84738274-84738293 | MS.gene029389:CDS | 60.0% | |
| TGAAGGCCGAGAGGACCCAA+AGG | - | chr1.4:84740487-84740506 | None:intergenic | 60.0% | |
| !! | CCGTTCCCCGAGTTGATGGT+TGG | - | chr1.4:84737949-84737968 | None:intergenic | 60.0% |
| GGGTCCTCTCGGCCTTCAAC+AGG | + | chr1.4:84740489-84740508 | MS.gene029389:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 84736434 | 84741686 | 84736434 | ID=MS.gene029389 |
| chr1.4 | mRNA | 84736434 | 84741686 | 84736434 | ID=MS.gene029389.t1;Parent=MS.gene029389 |
| chr1.4 | exon | 84736434 | 84736613 | 84736434 | ID=MS.gene029389.t1.exon1;Parent=MS.gene029389.t1 |
| chr1.4 | CDS | 84736434 | 84736613 | 84736434 | ID=cds.MS.gene029389.t1;Parent=MS.gene029389.t1 |
| chr1.4 | exon | 84737080 | 84737177 | 84737080 | ID=MS.gene029389.t1.exon2;Parent=MS.gene029389.t1 |
| chr1.4 | CDS | 84737080 | 84737177 | 84737080 | ID=cds.MS.gene029389.t1;Parent=MS.gene029389.t1 |
| chr1.4 | exon | 84737553 | 84738609 | 84737553 | ID=MS.gene029389.t1.exon3;Parent=MS.gene029389.t1 |
| chr1.4 | CDS | 84737553 | 84738609 | 84737553 | ID=cds.MS.gene029389.t1;Parent=MS.gene029389.t1 |
| chr1.4 | exon | 84739252 | 84739752 | 84739252 | ID=MS.gene029389.t1.exon4;Parent=MS.gene029389.t1 |
| chr1.4 | CDS | 84739252 | 84739752 | 84739252 | ID=cds.MS.gene029389.t1;Parent=MS.gene029389.t1 |
| chr1.4 | exon | 84740322 | 84740510 | 84740322 | ID=MS.gene029389.t1.exon5;Parent=MS.gene029389.t1 |
| chr1.4 | CDS | 84740322 | 84740510 | 84740322 | ID=cds.MS.gene029389.t1;Parent=MS.gene029389.t1 |
| chr1.4 | exon | 84740947 | 84741083 | 84740947 | ID=MS.gene029389.t1.exon6;Parent=MS.gene029389.t1 |
| chr1.4 | CDS | 84740947 | 84741083 | 84740947 | ID=cds.MS.gene029389.t1;Parent=MS.gene029389.t1 |
| chr1.4 | exon | 84741575 | 84741686 | 84741575 | ID=MS.gene029389.t1.exon7;Parent=MS.gene029389.t1 |
| chr1.4 | CDS | 84741575 | 84741686 | 84741575 | ID=cds.MS.gene029389.t1;Parent=MS.gene029389.t1 |
| Gene Sequence |
| Protein sequence |
