Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029391.t1 | XP_013470195.1 | 99.2 | 397 | 3 | 0 | 1 | 397 | 1 | 397 | 2.50E-176 | 628.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029391.t1 | Q84L31 | 74.8 | 424 | 74 | 5 | 1 | 396 | 1 | 419 | 7.8e-126 | 451.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029391.t1 | A0A072VS14 | 99.2 | 397 | 3 | 0 | 1 | 397 | 1 | 397 | 1.8e-176 | 628.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029391 | MS.gene99949 | PPI |
| MS.gene029391 | MS.gene90381 | PPI |
| MS.gene029391 | MS.gene83520 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029391.t1 | MTR_1g111090 | 99.244 | 397 | 3 | 0 | 1 | 397 | 1 | 397 | 0.0 | 796 |
| MS.gene029391.t1 | MTR_7g407040 | 65.152 | 396 | 112 | 8 | 1 | 396 | 1 | 370 | 8.69e-162 | 459 |
| MS.gene029391.t1 | MTR_2g105410 | 55.416 | 397 | 145 | 8 | 1 | 396 | 1 | 366 | 2.06e-142 | 410 |
| MS.gene029391.t1 | MTR_7g037380 | 52.941 | 68 | 30 | 1 | 18 | 83 | 72 | 139 | 3.27e-15 | 73.6 |
| MS.gene029391.t1 | MTR_7g006500 | 67.925 | 53 | 15 | 2 | 149 | 201 | 62 | 112 | 5.90e-14 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029391.t1 | AT3G02540 | 70.093 | 428 | 86 | 8 | 1 | 396 | 1 | 418 | 0.0 | 554 |
| MS.gene029391.t1 | AT3G02540 | 69.930 | 429 | 86 | 8 | 1 | 396 | 1 | 419 | 0.0 | 554 |
| MS.gene029391.t1 | AT5G38470 | 68.421 | 399 | 103 | 9 | 1 | 397 | 1 | 378 | 1.14e-177 | 499 |
| MS.gene029391.t1 | AT1G79650 | 56.281 | 398 | 145 | 9 | 1 | 396 | 1 | 371 | 2.42e-143 | 412 |
| MS.gene029391.t1 | AT1G79650 | 56.030 | 398 | 140 | 9 | 1 | 396 | 1 | 365 | 9.38e-143 | 410 |
| MS.gene029391.t1 | AT1G79650 | 54.087 | 416 | 150 | 10 | 1 | 396 | 1 | 395 | 8.21e-140 | 404 |
| MS.gene029391.t1 | AT1G16190 | 53.401 | 397 | 155 | 5 | 1 | 396 | 1 | 368 | 5.63e-139 | 401 |
| MS.gene029391.t1 | AT5G38470 | 66.265 | 332 | 91 | 8 | 1 | 330 | 1 | 313 | 9.11e-134 | 386 |
| MS.gene029391.t1 | AT1G16190 | 52.547 | 373 | 147 | 5 | 25 | 396 | 2 | 345 | 6.04e-126 | 367 |
| MS.gene029391.t1 | AT1G79650 | 52.261 | 398 | 141 | 10 | 1 | 396 | 1 | 351 | 1.59e-125 | 366 |
| MS.gene029391.t1 | AT3G02540 | 63.430 | 309 | 73 | 6 | 1 | 279 | 1 | 299 | 2.60e-115 | 338 |
| MS.gene029391.t1 | AT5G16090 | 60.526 | 76 | 30 | 0 | 1 | 76 | 1 | 76 | 1.02e-23 | 97.1 |
| MS.gene029391.t1 | AT5G16090 | 50.495 | 101 | 47 | 2 | 292 | 392 | 74 | 171 | 7.90e-23 | 94.7 |
Find 127 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGGAGCTTCAGCTTGTT+CGG | 0.259679 | 1.4:-84727287 | None:intergenic |
| GCAGCACCAGCACCAATATT+TGG | 0.271370 | 1.4:-84727518 | None:intergenic |
| CCTCCATAGGTTCGTTAATC+AGG | 0.298756 | 1.4:-84727880 | None:intergenic |
| ACTCATGCATGTGGTCTAAA+AGG | 0.325713 | 1.4:-84728610 | None:intergenic |
| AGGGAAGGTTCTGATGTCTA+TGG | 0.340684 | 1.4:+84726915 | MS.gene029391:intron |
| ATGCTTTAGGAACAACCTAT+TGG | 0.341168 | 1.4:+84728040 | MS.gene029391:intron |
| AGTTCAACAAATCCTAGATA+TGG | 0.341539 | 1.4:+84726983 | MS.gene029391:CDS |
| TGCTGCTGGTGCCGGTTCTC+TGG | 0.344680 | 1.4:+84727535 | MS.gene029391:CDS |
| TTCACAGGTTGTGCACTTGC+AGG | 0.353383 | 1.4:-84727322 | None:intergenic |
| TGCTTTAGGAACAACCTATT+GGG | 0.371188 | 1.4:+84728041 | MS.gene029391:intron |
| AATATTGGTGCTGGTGCTGC+TGG | 0.379034 | 1.4:+84727521 | MS.gene029391:CDS |
| GGAGCTGCAGCTGCAGCCTC+AGG | 0.380645 | 1.4:-84727346 | None:intergenic |
| CTCATCTTATGAGATTGATT+CGG | 0.386341 | 1.4:+84727834 | MS.gene029391:CDS |
| TCATCTTATGAGATTGATTC+GGG | 0.386880 | 1.4:+84727835 | MS.gene029391:CDS |
| TTCAATAGCTTGGCGCTCCT+CGG | 0.390524 | 1.4:-84728105 | None:intergenic |
| TTACAGGGCCTGCCAAATAT+TGG | 0.393136 | 1.4:+84727506 | MS.gene029391:intron |
| GAGATTGATTCGGGATCATC+AGG | 0.398560 | 1.4:+84727844 | MS.gene029391:CDS |
| AAATATTCAACCGCCCTCTC+AGG | 0.399566 | 1.4:-84727065 | None:intergenic |
| TGGGCAGGCTGCATCTAATC+TGG | 0.400887 | 1.4:+84726935 | MS.gene029391:CDS |
| GCTGGAGCTTCAGCTTGTTC+GGG | 0.405755 | 1.4:-84727286 | None:intergenic |
| GGCAAATCCACAAATATTGC+AGG | 0.411244 | 1.4:+84727707 | MS.gene029391:CDS |
| AAGAAAACCTGCAATATTTG+TGG | 0.413342 | 1.4:-84727714 | None:intergenic |
| GTAGCAGTTGCCGAGGATAT+AGG | 0.416272 | 1.4:-84726754 | None:intergenic |
| TGGGAGGAGGAAGCTGGGAT+AGG | 0.427311 | 1.4:+84727003 | MS.gene029391:CDS |
| AGGTCTAGAGGATTAGCATT+AGG | 0.432634 | 1.4:-84727406 | None:intergenic |
| TTAGGTCCACTTGAGGTAAC+AGG | 0.432965 | 1.4:-84727388 | None:intergenic |
| ATAGGAGCAGGAGCTGGAGC+TGG | 0.438364 | 1.4:-84726736 | None:intergenic |
| CAGCAGCCATCTGTCCCAAT+AGG | 0.439096 | 1.4:-84728055 | None:intergenic |
| GGTGCTGGTGCTGCTGGTGC+CGG | 0.439464 | 1.4:+84727527 | MS.gene029391:CDS |
| TAGATATGGGAGGAGGAAGC+TGG | 0.440681 | 1.4:+84726997 | MS.gene029391:CDS |
| CACGGTGCCGCAGTTGCAGC+AGG | 0.444802 | 1.4:-84726574 | None:intergenic |
| GCACCATAGCTCGCAATGCT+TGG | 0.445098 | 1.4:-84727683 | None:intergenic |
| TTTGCCAAGCTCTTGTAGCA+TGG | 0.451224 | 1.4:-84727804 | None:intergenic |
| GCTGCATCTAATCTGGTTGC+CGG | 0.462863 | 1.4:+84726942 | MS.gene029391:CDS |
| CATTGTGATCATGCTTTCAA+AGG | 0.464553 | 1.4:+84725918 | MS.gene029391:CDS |
| AACTTACACGTTCAATAGCT+TGG | 0.465361 | 1.4:-84728115 | None:intergenic |
| CTTATTGCAGCTTGAAGCAA+TGG | 0.466176 | 1.4:+84728517 | MS.gene029391:intron |
| GCAGGCGCTCGGGACACTGC+TGG | 0.466866 | 1.4:-84727304 | None:intergenic |
| TCAATAGCTTGGCGCTCCTC+GGG | 0.468475 | 1.4:-84728104 | None:intergenic |
| CAGCCCATGCTACAAGAGCT+TGG | 0.469143 | 1.4:+84727800 | MS.gene029391:intron |
| AGCTTCCTCCTCCCATATCT+AGG | 0.469763 | 1.4:-84726995 | None:intergenic |
| CGCCCTCTCAGGGTTATTGA+AGG | 0.470824 | 1.4:-84727054 | None:intergenic |
| GAAGGTGCAGCAACAGATGC+AGG | 0.472270 | 1.4:-84726712 | None:intergenic |
| GTTCAACAAATCCTAGATAT+GGG | 0.475757 | 1.4:+84726984 | MS.gene029391:CDS |
| GAACCTATGGAGGGCGGAGA+AGG | 0.477244 | 1.4:+84727890 | MS.gene029391:CDS |
| CCTGCTCCTGTTACCTCAAG+TGG | 0.477887 | 1.4:+84727382 | MS.gene029391:CDS |
| CGAAGTCACGCCACAAGACT+CGG | 0.479179 | 1.4:+84724938 | MS.gene029391:CDS |
| TTGTGCACTTGCAGGCGCTC+GGG | 0.479546 | 1.4:-84727314 | None:intergenic |
| TCGCCTGATTAACGAACCTA+TGG | 0.480298 | 1.4:+84727877 | MS.gene029391:CDS |
| GTTGTGCACTTGCAGGCGCT+CGG | 0.483214 | 1.4:-84727315 | None:intergenic |
| AGTAAGCCCGCGTCTGGTGA+AGG | 0.483949 | 1.4:+84726319 | MS.gene029391:CDS |
| CAGCAAATGCTTATTCATCA+AGG | 0.483953 | 1.4:+84725838 | MS.gene029391:CDS |
| TTGCCAAGCTCTTGTAGCAT+GGG | 0.484703 | 1.4:-84727803 | None:intergenic |
| GGGAGGAGGAAGCTGGGATA+GGG | 0.488129 | 1.4:+84727004 | MS.gene029391:CDS |
| GCAGGAGCTGGAGCTGGGGA+AGG | 0.489970 | 1.4:-84726730 | None:intergenic |
| TGATCGTGCTATAGTATTGG+AGG | 0.491124 | 1.4:+84728544 | MS.gene029391:CDS |
| CACCAGCACCAATATTTGGC+AGG | 0.492935 | 1.4:-84727514 | None:intergenic |
| CACCCTTCTCCGCCCTCCAT+AGG | 0.495258 | 1.4:-84727893 | None:intergenic |
| AGGTTCTGATGTCTATGGGC+AGG | 0.496402 | 1.4:+84726920 | MS.gene029391:CDS |
| TAGGAGCAGGAGCTGGAGCT+GGG | 0.499444 | 1.4:-84726735 | None:intergenic |
| GCGTAGAAAATCCAGAGAAC+CGG | 0.500402 | 1.4:-84727546 | None:intergenic |
| ATAAGCATTTGCTGTGCAGC+AGG | 0.503524 | 1.4:-84725829 | None:intergenic |
| CCACTTGAGGTAACAGGAGC+AGG | 0.508160 | 1.4:-84727382 | None:intergenic |
| TGGCAGAGTAAGCCCGCGTC+TGG | 0.509702 | 1.4:+84726313 | MS.gene029391:intron |
| AGCTCCTGCTCCTATATCCT+CGG | 0.510256 | 1.4:+84726744 | MS.gene029391:CDS |
| TCTGGTTGCCGGTAGCAACT+TGG | 0.522344 | 1.4:+84726953 | MS.gene029391:CDS |
| CCTGATTAACGAACCTATGG+AGG | 0.524546 | 1.4:+84727880 | MS.gene029391:CDS |
| GGTTGCCGGTAGCAACTTGG+AGG | 0.526533 | 1.4:+84726956 | MS.gene029391:CDS |
| TCCTCTAGACCTCTTTCCCC+AGG | 0.527390 | 1.4:+84727417 | MS.gene029391:CDS |
| CGACTGTTACCTGGGGAAAG+AGG | 0.528080 | 1.4:-84727426 | None:intergenic |
| GAAGGATGGTACCACCTTGG+AGG | 0.528142 | 1.4:+84725870 | MS.gene029391:CDS |
| CAAACTTCTCTCACCTTCGC+TGG | 0.531589 | 1.4:-84726364 | None:intergenic |
| TGTTCCCTCCAAGTTGCTAC+CGG | 0.534141 | 1.4:-84726961 | None:intergenic |
| TTATTGCAGCTTGAAGCAAT+GGG | 0.537260 | 1.4:+84728518 | MS.gene029391:intron |
| CATGTGGTCTAAAAGGTAGT+TGG | 0.538667 | 1.4:-84728603 | None:intergenic |
| ATAGACATCTACACCTTGAA+CGG | 0.540608 | 1.4:-84725806 | None:intergenic |
| GTTCCAAGCATTGCGAGCTA+TGG | 0.544462 | 1.4:+84727680 | MS.gene029391:intron |
| GGAGCAGGCTGAGCTGCTTG+TGG | 0.545404 | 1.4:-84727367 | None:intergenic |
| GGGAAGGTTCTGATGTCTAT+GGG | 0.550980 | 1.4:+84726916 | MS.gene029391:intron |
| TAGGAGCAGCACTTGTCTGT+GGG | 0.552599 | 1.4:-84726516 | None:intergenic |
| GCTGCAGCCTCAGGATTCAC+AGG | 0.553492 | 1.4:-84727337 | None:intergenic |
| AGCATTGCGAGCTATGGTGC+AGG | 0.553590 | 1.4:+84727686 | MS.gene029391:CDS |
| CTATTGGGACAGATGGCTGC+TGG | 0.554126 | 1.4:+84728056 | MS.gene029391:CDS |
| AATATTCAACCGCCCTCTCA+GGG | 0.556278 | 1.4:-84727064 | None:intergenic |
| TCAAGCTCCTGCTGCAACTG+CGG | 0.558262 | 1.4:+84726567 | MS.gene029391:CDS |
| GAGGATATAGGAGCAGGAGC+TGG | 0.559984 | 1.4:-84726742 | None:intergenic |
| GTTGCCGAGGATATAGGAGC+AGG | 0.561804 | 1.4:-84726748 | None:intergenic |
| GGCCTGCCAAATATTGGTGC+TGG | 0.565166 | 1.4:+84727512 | MS.gene029391:CDS |
| TTTGAAGGATGGTACCACCT+TGG | 0.566393 | 1.4:+84725867 | MS.gene029391:CDS |
| GTAGGAGCAGCACTTGTCTG+TGG | 0.567111 | 1.4:-84726517 | None:intergenic |
| AGATATGGGAGGAGGAAGCT+GGG | 0.572319 | 1.4:+84726998 | MS.gene029391:CDS |
| GTAAGCCCGCGTCTGGTGAA+GGG | 0.575627 | 1.4:+84726320 | MS.gene029391:CDS |
| GAACAACCTATTGGGACAGA+TGG | 0.579220 | 1.4:+84728049 | MS.gene029391:CDS |
| GTGGTCTAAAAGGTAGTTGG+CGG | 0.579276 | 1.4:-84728600 | None:intergenic |
| TTCAAATGCTCCTCCAGCGA+AGG | 0.580319 | 1.4:+84726351 | MS.gene029391:CDS |
| CAAATCCTAGATATGGGAGG+AGG | 0.580761 | 1.4:+84726990 | MS.gene029391:CDS |
| AACCTATGGAGGGCGGAGAA+GGG | 0.586771 | 1.4:+84727891 | MS.gene029391:CDS |
| AGGAGCAGGAGCTGGAGCTG+GGG | 0.587268 | 1.4:-84726734 | None:intergenic |
| ACCTGGGGAAAGAGGTCTAG+AGG | 0.592015 | 1.4:-84727418 | None:intergenic |
| CTTGAGGTGAAACAGACACT+GGG | 0.598069 | 1.4:-84726549 | None:intergenic |
| AGTAGACCCTTCACCAGACG+CGG | 0.598769 | 1.4:-84726326 | None:intergenic |
| AGCAAATGCTTATTCATCAA+GGG | 0.601247 | 1.4:+84725839 | MS.gene029391:CDS |
| CGAATCAATCTCATAAGATG+AGG | 0.606271 | 1.4:-84727833 | None:intergenic |
| GCTTGAGGTGAAACAGACAC+TGG | 0.613953 | 1.4:-84726550 | None:intergenic |
| TGCCTTCAATAACCCTGAGA+GGG | 0.615258 | 1.4:+84727052 | MS.gene029391:CDS |
| GCAGTTGCAGCAGGAGCTTG+AGG | 0.616444 | 1.4:-84726565 | None:intergenic |
| ACTTCTCTCACCTTCGCTGG+AGG | 0.619890 | 1.4:-84726361 | None:intergenic |
| TAGGTTCGTTAATCAGGCGA+AGG | 0.621575 | 1.4:-84727874 | None:intergenic |
| CTGATTAACGAACCTATGGA+GGG | 0.626493 | 1.4:+84727881 | MS.gene029391:CDS |
| ATTAGCATTAGGTCCACTTG+AGG | 0.629093 | 1.4:-84727395 | None:intergenic |
| TATTTACGTAGCAGTTGCCG+AGG | 0.633237 | 1.4:-84726761 | None:intergenic |
| CTTCAATAACCCTGAGAGGG+CGG | 0.633530 | 1.4:+84727055 | MS.gene029391:CDS |
| TGAGGGAAAACCGAGTCTTG+TGG | 0.634415 | 1.4:-84724948 | None:intergenic |
| GAGGTGAAACAGACACTGGG+GGG | 0.636174 | 1.4:-84726546 | None:intergenic |
| AGGAGCAGCACTTGTCTGTG+GGG | 0.638148 | 1.4:-84726515 | None:intergenic |
| GTTCGTCGAACTCATGCATG+TGG | 0.641221 | 1.4:-84728619 | None:intergenic |
| CTGCCTTCAATAACCCTGAG+AGG | 0.652037 | 1.4:+84727051 | MS.gene029391:CDS |
| ATCAGTAACTGTCACACCCG+AGG | 0.657070 | 1.4:+84728088 | MS.gene029391:CDS |
| TGAGGTGAAACAGACACTGG+GGG | 0.659088 | 1.4:-84726547 | None:intergenic |
| GTAGACCCTTCACCAGACGC+GGG | 0.666940 | 1.4:-84726325 | None:intergenic |
| GGTGTGACAGTTACTGATTG+TGG | 0.672986 | 1.4:-84728083 | None:intergenic |
| GTTGCCGGTAGCAACTTGGA+GGG | 0.675122 | 1.4:+84726957 | MS.gene029391:CDS |
| CAACAAATCCTAGATATGGG+AGG | 0.680457 | 1.4:+84726987 | MS.gene029391:CDS |
| AGGTGAAACAGACACTGGGG+GGG | 0.685526 | 1.4:-84726545 | None:intergenic |
| TGCACAACCTGTGAATCCTG+AGG | 0.701039 | 1.4:+84727330 | MS.gene029391:CDS |
| ATTAACGAACCTATGGAGGG+CGG | 0.702160 | 1.4:+84727884 | MS.gene029391:CDS |
| TTGAGGTGAAACAGACACTG+GGG | 0.743648 | 1.4:-84726548 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAAAAAAATTCTTC+TGG | + | chr1.4:84727463-84727482 | MS.gene029391:intron | 10.0% |
| !! | ATAAAAAAAAAAATTCTTCT+GGG | + | chr1.4:84727464-84727483 | MS.gene029391:intron | 10.0% |
| !! | ATTTAAATAAAAAATTAACC+AGG | - | chr1.4:84727239-84727258 | None:intergenic | 10.0% |
| !!! | AGAACTTTTTTTTTAATATA+TGG | + | chr1.4:84726293-84726312 | MS.gene029391:intron | 10.0% |
| !!! | TTATAATTGTTTTTGTATAT+TGG | + | chr1.4:84727949-84727968 | MS.gene029391:intron | 10.0% |
| !!! | TTTTTATTATTTTTGAGTTT+TGG | + | chr1.4:84726065-84726084 | MS.gene029391:intron | 10.0% |
| !! | AAAATACAATAAATAGGTAA+CGG | - | chr1.4:84728243-84728262 | None:intergenic | 15.0% |
| !!! | AAGATTAAATTTTTTGAAAC+AGG | + | chr1.4:84726895-84726914 | MS.gene029391:intron | 15.0% |
| !!! | ACATTATACATTTGTTAATT+AGG | + | chr1.4:84728316-84728335 | MS.gene029391:intron | 15.0% |
| !!! | AGATTAAATTTTTTGAAACA+GGG | + | chr1.4:84726896-84726915 | MS.gene029391:intron | 15.0% |
| !!! | ATAATTTTGTACATTGAAAA+TGG | + | chr1.4:84726827-84726846 | MS.gene029391:intron | 15.0% |
| !! | AAATTACAAAATACAGAGAA+AGG | - | chr1.4:84728474-84728493 | None:intergenic | 20.0% |
| !! | AATATAAGACATAACTACTA+AGG | - | chr1.4:84727744-84727763 | None:intergenic | 20.0% |
| !! | ATAGAATATAACAAGCATTA+AGG | - | chr1.4:84726258-84726277 | None:intergenic | 20.0% |
| !! | ATTCTGTTTACTTTAATGTT+TGG | + | chr1.4:84726783-84726802 | MS.gene029391:intron | 20.0% |
| !! | ATTTGATTGTTAGTTAAGTT+AGG | + | chr1.4:84725079-84725098 | MS.gene029391:intron | 20.0% |
| !! | TTGTTATATATTTGAGTCTT+AGG | + | chr1.4:84728399-84728418 | MS.gene029391:intron | 20.0% |
| !! | TTTGATTGTTAGTTAAGTTA+GGG | + | chr1.4:84725080-84725099 | MS.gene029391:intron | 20.0% |
| !!! | AATGCTTGTTATATTCTATT+CGG | + | chr1.4:84726259-84726278 | MS.gene029391:intron | 20.0% |
| !!! | ATTGTTTTTGTATATTGGAA+TGG | + | chr1.4:84727954-84727973 | MS.gene029391:intron | 20.0% |
| !!! | CTGTATTTTGTAATTTATGT+GGG | + | chr1.4:84728478-84728497 | MS.gene029391:intron | 20.0% |
| !!! | GAATTTTGTTGTTAAGTTTT+TGG | + | chr1.4:84725272-84725291 | MS.gene029391:intron | 20.0% |
| !!! | TATTATTTTTGAGTTTTGGT+TGG | + | chr1.4:84726069-84726088 | MS.gene029391:intron | 20.0% |
| !!! | TCTGAATTATGATTTTTAGT+GGG | + | chr1.4:84725250-84725269 | MS.gene029391:intron | 20.0% |
| !!! | TCTGTATTTTGTAATTTATG+TGG | + | chr1.4:84728477-84728496 | MS.gene029391:intron | 20.0% |
| !!! | TTACTTTAATGTTTGGAATT+TGG | + | chr1.4:84726790-84726809 | MS.gene029391:intron | 20.0% |
| !!! | TTCTGAATTATGATTTTTAG+TGG | + | chr1.4:84725249-84725268 | MS.gene029391:intron | 20.0% |
| !!! | TTGAGTTGTTTAGATATATT+TGG | + | chr1.4:84726623-84726642 | MS.gene029391:intron | 20.0% |
| !!! | TTGTTTTTGTATATTGGAAT+GGG | + | chr1.4:84727955-84727974 | MS.gene029391:intron | 20.0% |
| !!! | TTTTTGTTGTTATATTTGCT+GGG | + | chr1.4:84726419-84726438 | MS.gene029391:intron | 20.0% |
| !!! | TTTTTTGTTGTTATATTTGC+TGG | + | chr1.4:84726418-84726437 | MS.gene029391:intron | 20.0% |
| ! | AAAAAAAAAATTCTTCTGGG+TGG | + | chr1.4:84727467-84727486 | MS.gene029391:intron | 25.0% |
| ! | AAAAATATAGAAACCGTTCA+AGG | + | chr1.4:84725793-84725812 | MS.gene029391:CDS | 25.0% |
| ! | AACAATTATGTATTCTTTGC+AGG | + | chr1.4:84726492-84726511 | MS.gene029391:intron | 25.0% |
| ! | AAGAATCATCAAGAAATAAC+AGG | - | chr1.4:84727171-84727190 | None:intergenic | 25.0% |
| ! | AATCTTCATTTCAATTTGAC+AGG | + | chr1.4:84726689-84726708 | MS.gene029391:intron | 25.0% |
| ! | ATACTTAACTGTATGTTACA+GGG | + | chr1.4:84727491-84727510 | MS.gene029391:intron | 25.0% |
| ! | ATATAGCAGAAAAACAATTG+TGG | - | chr1.4:84725727-84725746 | None:intergenic | 25.0% |
| ! | CAAAACCTATTAAGACTATA+AGG | + | chr1.4:84728185-84728204 | MS.gene029391:intron | 25.0% |
| ! | GAGGTTAAATTCACTAAATA+AGG | - | chr1.4:84725622-84725641 | None:intergenic | 25.0% |
| ! | GCACTGAATTTATTACTTAT+AGG | + | chr1.4:84727611-84727630 | MS.gene029391:intron | 25.0% |
| ! | GTCGAGAAAATACAATAAAT+AGG | - | chr1.4:84728249-84728268 | None:intergenic | 25.0% |
| ! | GTGCATAAATAGTTCAAATT+TGG | + | chr1.4:84728343-84728362 | MS.gene029391:intron | 25.0% |
| ! | TAATGGAACAATCAAGATAA+TGG | - | chr1.4:84726861-84726880 | None:intergenic | 25.0% |
| ! | TATACTTAACTGTATGTTAC+AGG | + | chr1.4:84727490-84727509 | MS.gene029391:intron | 25.0% |
| ! | TATTAAGACTATAAGGACTA+AGG | + | chr1.4:84728192-84728211 | MS.gene029391:intron | 25.0% |
| ! | TTATATATTTGAGTCTTAGG+CGG | + | chr1.4:84728402-84728421 | MS.gene029391:intron | 25.0% |
| ! | TTCCTATATATTACAGTTAC+CGG | + | chr1.4:84727136-84727155 | MS.gene029391:intron | 25.0% |
| !! | CTTTTAGCAACATAGTTTAA+TGG | - | chr1.4:84726878-84726897 | None:intergenic | 25.0% |
| !! | GATTCTTACATATCTTGTTT+CGG | + | chr1.4:84727184-84727203 | MS.gene029391:intron | 25.0% |
| !! | TATTTTGTAATTTATGTGGG+TGG | + | chr1.4:84728481-84728500 | MS.gene029391:intron | 25.0% |
| !! | TTAGTCCTTATAGTCTTAAT+AGG | - | chr1.4:84728193-84728212 | None:intergenic | 25.0% |
| !! | TTCTATATTTTTCTTGACTG+CGG | - | chr1.4:84725785-84725804 | None:intergenic | 25.0% |
| !! | TTTAAGTTATGATTTCGATG+TGG | + | chr1.4:84725193-84725212 | MS.gene029391:intron | 25.0% |
| !!! | GTTGTTAAGTTTTTGGTTAT+TGG | + | chr1.4:84725279-84725298 | MS.gene029391:intron | 25.0% |
| !!! | GTTGTTGATTTGAATTTTCT+TGG | + | chr1.4:84725146-84725165 | MS.gene029391:intron | 25.0% |
| !!! | GTTTGAGTCTTATATGATTT+TGG | + | chr1.4:84727209-84727228 | MS.gene029391:intron | 25.0% |
| !!! | TAAATTTTTTGAAACAGGGA+AGG | + | chr1.4:84726900-84726919 | MS.gene029391:intron | 25.0% |
| !!! | TTTTGTTGTTATATTTGCTG+GGG | + | chr1.4:84726420-84726439 | MS.gene029391:intron | 25.0% |
| AAAACTCGATCAACATATGT+AGG | - | chr1.4:84728279-84728298 | None:intergenic | 30.0% | |
| AAAATCTCTTCATAAGTACC+AGG | + | chr1.4:84725391-84725410 | MS.gene029391:intron | 30.0% | |
| AAACTCGATCAACATATGTA+GGG | - | chr1.4:84728278-84728297 | None:intergenic | 30.0% | |
| AAATAACAGGAATTCCAAAC+CGG | - | chr1.4:84727158-84727177 | None:intergenic | 30.0% | |
| AACATAATCAACTCCAGTTA+TGG | - | chr1.4:84726197-84726216 | None:intergenic | 30.0% | |
| AACCGGTAACTGTAATATAT+AGG | - | chr1.4:84727141-84727160 | None:intergenic | 30.0% | |
| AAGAAAACCTGCAATATTTG+TGG | - | chr1.4:84727717-84727736 | None:intergenic | 30.0% | |
| AAGTCAATAATTAACCGAAC+AGG | - | chr1.4:84725124-84725143 | None:intergenic | 30.0% | |
| ACAAGCATTAAGGAATGAAA+AGG | - | chr1.4:84726248-84726267 | None:intergenic | 30.0% | |
| AGAAAATGACAGATCGATTA+AGG | - | chr1.4:84728162-84728181 | None:intergenic | 30.0% | |
| AGATTCAGAGTTCATTTGAA+TGG | - | chr1.4:84726674-84726693 | None:intergenic | 30.0% | |
| AGCAAATGCTTATTCATCAA+GGG | + | chr1.4:84725839-84725858 | MS.gene029391:CDS | 30.0% | |
| AGTCAATAATTAACCGAACA+GGG | - | chr1.4:84725123-84725142 | None:intergenic | 30.0% | |
| AGTTCAACAAATCCTAGATA+TGG | + | chr1.4:84726983-84727002 | MS.gene029391:CDS | 30.0% | |
| CTCAATTATTGAAATTCTCG+TGG | - | chr1.4:84725493-84725512 | None:intergenic | 30.0% | |
| CTCATCTTATGAGATTGATT+CGG | + | chr1.4:84727834-84727853 | MS.gene029391:CDS | 30.0% | |
| GGTTCAGAATAAAAACAACA+CGG | - | chr1.4:84725706-84725725 | None:intergenic | 30.0% | |
| GTTCAACAAATCCTAGATAT+GGG | + | chr1.4:84726984-84727003 | MS.gene029391:CDS | 30.0% | |
| TATATATTTGAGTCTTAGGC+GGG | + | chr1.4:84728403-84728422 | MS.gene029391:intron | 30.0% | |
| TGTCTTATATTCTCTTCTTG+TGG | + | chr1.4:84727753-84727772 | MS.gene029391:intron | 30.0% | |
| TGTTTGGATCATTACTTTCT+AGG | + | chr1.4:84725341-84725360 | MS.gene029391:intron | 30.0% | |
| TTGCAACAAAAATGAGGAAT+TGG | + | chr1.4:84728577-84728596 | MS.gene029391:CDS | 30.0% | |
| TTTGTCTATTTAGCCATAAC+TGG | + | chr1.4:84726181-84726200 | MS.gene029391:intron | 30.0% | |
| ! | ATATATTACAGTTACCGGTT+TGG | + | chr1.4:84727141-84727160 | MS.gene029391:intron | 30.0% |
| ! | ATTGTTTCTCAGAAATATGG+AGG | + | chr1.4:84728373-84728392 | MS.gene029391:intron | 30.0% |
| ! | CCATATTTCTGAGAAACAAT+AGG | - | chr1.4:84728373-84728392 | None:intergenic | 30.0% |
| ! | CCTATTGTTTCTCAGAAATA+TGG | + | chr1.4:84728370-84728389 | MS.gene029391:intron | 30.0% |
| ! | TCATCTTATGAGATTGATTC+GGG | + | chr1.4:84727835-84727854 | MS.gene029391:CDS | 30.0% |
| ! | TGTTTTCAGTTCCTGTAAAT+GGG | - | chr1.4:84726466-84726485 | None:intergenic | 30.0% |
| ! | TTTTGATCGTGCTATAGTAT+TGG | + | chr1.4:84728541-84728560 | MS.gene029391:CDS | 30.0% |
| !! | AATCAATGTAGTTTTCGAGA+CGG | - | chr1.4:84725968-84725987 | None:intergenic | 30.0% |
| !!! | ATTTTTGAGTTTTGGTTGGT+TGG | + | chr1.4:84726073-84726092 | MS.gene029391:intron | 30.0% |
| !!! | GTGTTTTTTTTTTCCCTGTT+CGG | + | chr1.4:84725107-84725126 | MS.gene029391:intron | 30.0% |
| AAAAATGTCCTAGAAACACC+AGG | + | chr1.4:84728439-84728458 | MS.gene029391:intron | 35.0% | |
| AAAATGTCCTAGAAACACCA+GGG | + | chr1.4:84728440-84728459 | MS.gene029391:intron | 35.0% | |
| AAAGCCAAAAAGTAAGCCAA+TGG | - | chr1.4:84728016-84728035 | None:intergenic | 35.0% | |
| AACTTACACGTTCAATAGCT+TGG | - | chr1.4:84728118-84728137 | None:intergenic | 35.0% | |
| ACTTGAAAATACCTGTCCAT+TGG | + | chr1.4:84727997-84728016 | MS.gene029391:intron | 35.0% | |
| AGATCTTAACCACTCCAAAT+TGG | - | chr1.4:84726117-84726136 | None:intergenic | 35.0% | |
| AGTTTATCCCAGCTATCTTA+AGG | + | chr1.4:84726149-84726168 | MS.gene029391:intron | 35.0% | |
| ATAGACATCTACACCTTGAA+CGG | - | chr1.4:84725809-84725828 | None:intergenic | 35.0% | |
| ATATATTTGAGTCTTAGGCG+GGG | + | chr1.4:84728404-84728423 | MS.gene029391:intron | 35.0% | |
| CAGCAAATGCTTATTCATCA+AGG | + | chr1.4:84725838-84725857 | MS.gene029391:CDS | 35.0% | |
| CATGTAAAACAAGTCACTCA+CGG | - | chr1.4:84726595-84726614 | None:intergenic | 35.0% | |
| CATTGTGATCATGCTTTCAA+AGG | + | chr1.4:84725918-84725937 | MS.gene029391:CDS | 35.0% | |
| CGAATCAATCTCATAAGATG+AGG | - | chr1.4:84727836-84727855 | None:intergenic | 35.0% | |
| CTGTGTTTGCGACAAAATAA+CGG | - | chr1.4:84726011-84726030 | None:intergenic | 35.0% | |
| CTTTGCTTGCAACAAAAATG+AGG | + | chr1.4:84728571-84728590 | MS.gene029391:CDS | 35.0% | |
| GAAGGATATTACCCATTTAC+AGG | + | chr1.4:84726452-84726471 | MS.gene029391:intron | 35.0% | |
| GCAATGAAACTTCTGATCAA+AGG | - | chr1.4:84725453-84725472 | None:intergenic | 35.0% | |
| GTGGTATGTAGAATATGATG+TGG | + | chr1.4:84725212-84725231 | MS.gene029391:intron | 35.0% | |
| GTTTATCCCAGCTATCTTAA+GGG | + | chr1.4:84726150-84726169 | MS.gene029391:intron | 35.0% | |
| TGCAGCAATAACAAGAATCA+GGG | - | chr1.4:84727782-84727801 | None:intergenic | 35.0% | |
| TTATTGCAGCTTGAAGCAAT+GGG | + | chr1.4:84728518-84728537 | MS.gene029391:intron | 35.0% | |
| ! | CTGTTTTCAGTTCCTGTAAA+TGG | - | chr1.4:84726467-84726486 | None:intergenic | 35.0% |
| ! | GTGGTGTTTGATAGTTATAC+TGG | + | chr1.4:84725661-84725680 | MS.gene029391:intron | 35.0% |
| ! | GTTTTCGTCAAGACTCTTAA+AGG | + | chr1.4:84724900-84724919 | MS.gene029391:CDS | 35.0% |
| !! | ATGCTTTAGGAACAACCTAT+TGG | + | chr1.4:84728040-84728059 | MS.gene029391:intron | 35.0% |
| !! | ATGTTGATCGAGTTTTGTCT+AGG | + | chr1.4:84728283-84728302 | MS.gene029391:intron | 35.0% |
| !! | TCATCAAGGGAAAGTTTTGA+AGG | + | chr1.4:84725852-84725871 | MS.gene029391:CDS | 35.0% |
| !! | TGCTTTAGGAACAACCTATT+GGG | + | chr1.4:84728041-84728060 | MS.gene029391:intron | 35.0% |
| !! | TTTGGCTTTCAACATGCTTT+AGG | + | chr1.4:84728027-84728046 | MS.gene029391:intron | 35.0% |
| !!! | AGCTACTTTATTTTCCTCCA+AGG | - | chr1.4:84725887-84725906 | None:intergenic | 35.0% |
| !!! | TACTTTATTTTCCTCCAAGG+TGG | - | chr1.4:84725884-84725903 | None:intergenic | 35.0% |
| !!! | TTATATGATTTTGGCTTGCC+TGG | + | chr1.4:84727218-84727237 | MS.gene029391:intron | 35.0% |
| ACTCATGCATGTGGTCTAAA+AGG | - | chr1.4:84728613-84728632 | None:intergenic | 40.0% | |
| AGTTCCACATTGTCTCTGTT+TGG | + | chr1.4:84725325-84725344 | MS.gene029391:intron | 40.0% | |
| ATAAAACAGCGACTGTTACC+TGG | - | chr1.4:84727438-84727457 | None:intergenic | 40.0% | |
| ATTAGCATTAGGTCCACTTG+AGG | - | chr1.4:84727398-84727417 | None:intergenic | 40.0% | |
| ATTGTGAAGCAGAAGTAGTC+TGG | - | chr1.4:84726046-84726065 | None:intergenic | 40.0% | |
| CAAAAAGTAAGCCAATGGAC+AGG | - | chr1.4:84728011-84728030 | None:intergenic | 40.0% | |
| CAACAAATCCTAGATATGGG+AGG | + | chr1.4:84726987-84727006 | MS.gene029391:CDS | 40.0% | |
| CATGTGGTCTAAAAGGTAGT+TGG | - | chr1.4:84728606-84728625 | None:intergenic | 40.0% | |
| CTGATTAACGAACCTATGGA+GGG | + | chr1.4:84727881-84727900 | MS.gene029391:CDS | 40.0% | |
| CTGCAGCAATAACAAGAATC+AGG | - | chr1.4:84727783-84727802 | None:intergenic | 40.0% | |
| CTTATTGCAGCTTGAAGCAA+TGG | + | chr1.4:84728517-84728536 | MS.gene029391:intron | 40.0% | |
| GAGTCGAAATCAGAGTTTGA+GGG | - | chr1.4:84724968-84724987 | None:intergenic | 40.0% | |
| GCTTCAAGCTGCAATAAGAA+AGG | - | chr1.4:84728515-84728534 | None:intergenic | 40.0% | |
| GCTTGGAACTGGAATGAAAA+TGG | - | chr1.4:84727669-84727688 | None:intergenic | 40.0% | |
| GGCAAATCCACAAATATTGC+AGG | + | chr1.4:84727707-84727726 | MS.gene029391:CDS | 40.0% | |
| TAAAACAGCGACTGTTACCT+GGG | - | chr1.4:84727437-84727456 | None:intergenic | 40.0% | |
| TAATTGACCCTGGTGTTTCT+AGG | - | chr1.4:84728450-84728469 | None:intergenic | 40.0% | |
| TGAGTCGAAATCAGAGTTTG+AGG | - | chr1.4:84724969-84724988 | None:intergenic | 40.0% | |
| TGATCCAAACAGAGACAATG+TGG | - | chr1.4:84725332-84725351 | None:intergenic | 40.0% | |
| TGGAATCTCACATGCCAATT+TGG | + | chr1.4:84726100-84726119 | MS.gene029391:intron | 40.0% | |
| TGGACTGTCAAAAGTGATAC+CGG | + | chr1.4:84725576-84725595 | MS.gene029391:intron | 40.0% | |
| TTGCTGGGGTATAGTAAAGA+AGG | + | chr1.4:84726434-84726453 | MS.gene029391:intron | 40.0% | |
| ! | AGGTCTAGAGGATTAGCATT+AGG | - | chr1.4:84727409-84727428 | None:intergenic | 40.0% |
| ! | TGATCGTGCTATAGTATTGG+AGG | + | chr1.4:84728544-84728563 | MS.gene029391:CDS | 40.0% |
| !!! | CAAGGGAAAGTTTTGAAGGA+TGG | + | chr1.4:84725856-84725875 | MS.gene029391:CDS | 40.0% |
| !!! | CTGTCCATTGGCTTACTTTT+TGG | + | chr1.4:84728009-84728028 | MS.gene029391:intron | 40.0% |
| AAAACAGCGACTGTTACCTG+GGG | - | chr1.4:84727436-84727455 | None:intergenic | 45.0% | |
| AAATATTCAACCGCCCTCTC+AGG | - | chr1.4:84727068-84727087 | None:intergenic | 45.0% | |
| AATATTCAACCGCCCTCTCA+GGG | - | chr1.4:84727067-84727086 | None:intergenic | 45.0% | |
| AATTTGCAGTGTGCAAAGCG+AGG | - | chr1.4:84725641-84725660 | None:intergenic | 45.0% | |
| AGAGAAAGGCTAATTGACCC+TGG | - | chr1.4:84728460-84728479 | None:intergenic | 45.0% | |
| ATTAACGAACCTATGGAGGG+CGG | + | chr1.4:84727884-84727903 | MS.gene029391:CDS | 45.0% | |
| ATTCAGTGCAAATGCAGCAC+AGG | - | chr1.4:84727600-84727619 | None:intergenic | 45.0% | |
| CAAATCCTAGATATGGGAGG+AGG | + | chr1.4:84726990-84727009 | MS.gene029391:CDS | 45.0% | |
| CACAGACCCTTAAGATAGCT+GGG | - | chr1.4:84726159-84726178 | None:intergenic | 45.0% | |
| CCTCCATAGGTTCGTTAATC+AGG | - | chr1.4:84727883-84727902 | None:intergenic | 45.0% | |
| CCTGATTAACGAACCTATGG+AGG | + | chr1.4:84727880-84727899 | MS.gene029391:CDS | 45.0% | |
| CTTGAGGTGAAACAGACACT+GGG | - | chr1.4:84726552-84726571 | None:intergenic | 45.0% | |
| GAACAACCTATTGGGACAGA+TGG | + | chr1.4:84728049-84728068 | MS.gene029391:CDS | 45.0% | |
| GATACCGGCCTTACAACTTA+GGG | + | chr1.4:84725591-84725610 | MS.gene029391:intron | 45.0% | |
| GCGTAGAAAATCCAGAGAAC+CGG | - | chr1.4:84727549-84727568 | None:intergenic | 45.0% | |
| GCTTTGCACACTGCAAATTG+TGG | + | chr1.4:84725642-84725661 | MS.gene029391:intron | 45.0% | |
| GTGGTCTAAAAGGTAGTTGG+CGG | - | chr1.4:84728603-84728622 | None:intergenic | 45.0% | |
| TAGGTTCGTTAATCAGGCGA+AGG | - | chr1.4:84727877-84727896 | None:intergenic | 45.0% | |
| TATTTACGTAGCAGTTGCCG+AGG | - | chr1.4:84726764-84726783 | None:intergenic | 45.0% | |
| TCGCCTGATTAACGAACCTA+TGG | + | chr1.4:84727877-84727896 | MS.gene029391:CDS | 45.0% | |
| TCTCACATGCCAATTTGGAG+TGG | + | chr1.4:84726105-84726124 | MS.gene029391:intron | 45.0% | |
| TGATACCGGCCTTACAACTT+AGG | + | chr1.4:84725590-84725609 | MS.gene029391:intron | 45.0% | |
| TGCCTTCAATAACCCTGAGA+GGG | + | chr1.4:84727052-84727071 | MS.gene029391:CDS | 45.0% | |
| TTACAGGGCCTGCCAAATAT+TGG | + | chr1.4:84727506-84727525 | MS.gene029391:intron | 45.0% | |
| TTAGGTCCACTTGAGGTAAC+AGG | - | chr1.4:84727391-84727410 | None:intergenic | 45.0% | |
| TTCAGTGCAAATGCAGCACA+GGG | - | chr1.4:84727599-84727618 | None:intergenic | 45.0% | |
| TTGAGGTGAAACAGACACTG+GGG | - | chr1.4:84726551-84726570 | None:intergenic | 45.0% | |
| TTGCCAAGCTCTTGTAGCAT+GGG | - | chr1.4:84727806-84727825 | None:intergenic | 45.0% | |
| TTTGAAGGATGGTACCACCT+TGG | + | chr1.4:84725867-84725886 | MS.gene029391:CDS | 45.0% | |
| TTTGCCAAGCTCTTGTAGCA+TGG | - | chr1.4:84727807-84727826 | None:intergenic | 45.0% | |
| ! | AGGGAAGGTTCTGATGTCTA+TGG | + | chr1.4:84726915-84726934 | MS.gene029391:intron | 45.0% |
| ! | GGGAAGGTTCTGATGTCTAT+GGG | + | chr1.4:84726916-84726935 | MS.gene029391:intron | 45.0% |
| ! | GGTGTGACAGTTACTGATTG+TGG | - | chr1.4:84728086-84728105 | None:intergenic | 45.0% |
| !! | ATAAGCATTTGCTGTGCAGC+AGG | - | chr1.4:84725832-84725851 | None:intergenic | 45.0% |
| !! | GAGATTGATTCGGGATCATC+AGG | + | chr1.4:84727844-84727863 | MS.gene029391:CDS | 45.0% |
| !!! | AGTTTTGGTTGGTTGGTGTG+TGG | + | chr1.4:84726080-84726099 | MS.gene029391:intron | 45.0% |
| !! | ATAAATAAGTTATTATTTAA+TGG | + | chr1.4:84725556-84725575 | MS.gene029391:intron | 5.0% |
| !! | ATTAAATAATAACTTATTTA+TGG | - | chr1.4:84725557-84725576 | None:intergenic | 5.0% |
| !! | TAAAAATATTCATAAATTTA+GGG | + | chr1.4:84727259-84727278 | MS.gene029391:intron | 5.0% |
| !! | TTAAAAATATTCATAAATTT+AGG | + | chr1.4:84727258-84727277 | MS.gene029391:intron | 5.0% |
| AGATATGGGAGGAGGAAGCT+GGG | + | chr1.4:84726998-84727017 | MS.gene029391:CDS | 50.0% | |
| AGCTCCTGCTCCTATATCCT+CGG | + | chr1.4:84726744-84726763 | MS.gene029391:CDS | 50.0% | |
| AGCTTCCTCCTCCCATATCT+AGG | - | chr1.4:84726998-84727017 | None:intergenic | 50.0% | |
| ATCAGTAACTGTCACACCCG+AGG | + | chr1.4:84728088-84728107 | MS.gene029391:CDS | 50.0% | |
| CAAACTTCTCTCACCTTCGC+TGG | - | chr1.4:84726367-84726386 | None:intergenic | 50.0% | |
| CACCAGCACCAATATTTGGC+AGG | - | chr1.4:84727517-84727536 | None:intergenic | 50.0% | |
| CACTGACACACGTCAAACAC+CGG | + | chr1.4:84725415-84725434 | MS.gene029391:intron | 50.0% | |
| CCACAGACCCTTAAGATAGC+TGG | - | chr1.4:84726160-84726179 | None:intergenic | 50.0% | |
| CCAGCTATCTTAAGGGTCTG+TGG | + | chr1.4:84726157-84726176 | MS.gene029391:intron | 50.0% | |
| CTGCCTTCAATAACCCTGAG+AGG | + | chr1.4:84727051-84727070 | MS.gene029391:CDS | 50.0% | |
| CTTCAATAACCCTGAGAGGG+CGG | + | chr1.4:84727055-84727074 | MS.gene029391:CDS | 50.0% | |
| GCAGCACCAGCACCAATATT+TGG | - | chr1.4:84727521-84727540 | None:intergenic | 50.0% | |
| GCTGCATCTAATCTGGTTGC+CGG | + | chr1.4:84726942-84726961 | MS.gene029391:CDS | 50.0% | |
| GCTTGAGGTGAAACAGACAC+TGG | - | chr1.4:84726553-84726572 | None:intergenic | 50.0% | |
| GTAGCAGTTGCCGAGGATAT+AGG | - | chr1.4:84726757-84726776 | None:intergenic | 50.0% | |
| GTTCGTCGAACTCATGCATG+TGG | - | chr1.4:84728622-84728641 | None:intergenic | 50.0% | |
| TAGATATGGGAGGAGGAAGC+TGG | + | chr1.4:84726997-84727016 | MS.gene029391:CDS | 50.0% | |
| TAGCTCGCAATGCTTGGAAC+TGG | - | chr1.4:84727680-84727699 | None:intergenic | 50.0% | |
| TAGGAGCAGCACTTGTCTGT+GGG | - | chr1.4:84726519-84726538 | None:intergenic | 50.0% | |
| TGAGGGAAAACCGAGTCTTG+TGG | - | chr1.4:84724951-84724970 | None:intergenic | 50.0% | |
| TGAGGTGAAACAGACACTGG+GGG | - | chr1.4:84726550-84726569 | None:intergenic | 50.0% | |
| TGCACAACCTGTGAATCCTG+AGG | + | chr1.4:84727330-84727349 | MS.gene029391:CDS | 50.0% | |
| TGTTCCCTCCAAGTTGCTAC+CGG | - | chr1.4:84726964-84726983 | None:intergenic | 50.0% | |
| TTCAAATGCTCCTCCAGCGA+AGG | + | chr1.4:84726351-84726370 | MS.gene029391:CDS | 50.0% | |
| TTCAATAGCTTGGCGCTCCT+CGG | - | chr1.4:84728108-84728127 | None:intergenic | 50.0% | |
| TTCACAGGTTGTGCACTTGC+AGG | - | chr1.4:84727325-84727344 | None:intergenic | 50.0% | |
| TTTGACGTGTGTCAGTGTCC+TGG | - | chr1.4:84725412-84725431 | None:intergenic | 50.0% | |
| ! | AGGTTCTGATGTCTATGGGC+AGG | + | chr1.4:84726920-84726939 | MS.gene029391:CDS | 50.0% |
| ! | GTTCCAAGCATTGCGAGCTA+TGG | + | chr1.4:84727680-84727699 | MS.gene029391:intron | 50.0% |
| ! | TCAAAGGTGTGTCCTGTGTC+CGG | - | chr1.4:84725437-84725456 | None:intergenic | 50.0% |
| ! | TGCTGGAGCTTCAGCTTGTT+CGG | - | chr1.4:84727290-84727309 | None:intergenic | 50.0% |
| !! | AATATTGGTGCTGGTGCTGC+TGG | + | chr1.4:84727521-84727540 | MS.gene029391:CDS | 50.0% |
| AACCTATGGAGGGCGGAGAA+GGG | + | chr1.4:84727891-84727910 | MS.gene029391:CDS | 55.0% | |
| ACACGTCAAACACCGGACAC+AGG | + | chr1.4:84725422-84725441 | MS.gene029391:intron | 55.0% | |
| ACCTGGGGAAAGAGGTCTAG+AGG | - | chr1.4:84727421-84727440 | None:intergenic | 55.0% | |
| ACTTCTCTCACCTTCGCTGG+AGG | - | chr1.4:84726364-84726383 | None:intergenic | 55.0% | |
| AGCATTGCGAGCTATGGTGC+AGG | + | chr1.4:84727686-84727705 | MS.gene029391:CDS | 55.0% | |
| AGGAGCAGCACTTGTCTGTG+GGG | - | chr1.4:84726518-84726537 | None:intergenic | 55.0% | |
| AGGCGCAGCCCTAAGTTGTA+AGG | - | chr1.4:84725602-84725621 | None:intergenic | 55.0% | |
| AGGTGAAACAGACACTGGGG+GGG | - | chr1.4:84726548-84726567 | None:intergenic | 55.0% | |
| AGTAGACCCTTCACCAGACG+CGG | - | chr1.4:84726329-84726348 | None:intergenic | 55.0% | |
| CAGCAGCCATCTGTCCCAAT+AGG | - | chr1.4:84728058-84728077 | None:intergenic | 55.0% | |
| CAGCCCATGCTACAAGAGCT+TGG | + | chr1.4:84727800-84727819 | MS.gene029391:intron | 55.0% | |
| CCACTTGAGGTAACAGGAGC+AGG | - | chr1.4:84727385-84727404 | None:intergenic | 55.0% | |
| CCTGCTCCTGTTACCTCAAG+TGG | + | chr1.4:84727382-84727401 | MS.gene029391:CDS | 55.0% | |
| CGAAGTCACGCCACAAGACT+CGG | + | chr1.4:84724938-84724957 | MS.gene029391:CDS | 55.0% | |
| CGACTGTTACCTGGGGAAAG+AGG | - | chr1.4:84727429-84727448 | None:intergenic | 55.0% | |
| CGCCCTCTCAGGGTTATTGA+AGG | - | chr1.4:84727057-84727076 | None:intergenic | 55.0% | |
| CTATTGGGACAGATGGCTGC+TGG | + | chr1.4:84728056-84728075 | MS.gene029391:CDS | 55.0% | |
| GAAGGATGGTACCACCTTGG+AGG | + | chr1.4:84725870-84725889 | MS.gene029391:CDS | 55.0% | |
| GAGGATATAGGAGCAGGAGC+TGG | - | chr1.4:84726745-84726764 | None:intergenic | 55.0% | |
| GAGGTGAAACAGACACTGGG+GGG | - | chr1.4:84726549-84726568 | None:intergenic | 55.0% | |
| GCACCATAGCTCGCAATGCT+TGG | - | chr1.4:84727686-84727705 | None:intergenic | 55.0% | |
| GCAGCCCTAAGTTGTAAGGC+CGG | - | chr1.4:84725598-84725617 | None:intergenic | 55.0% | |
| GGCCTGCCAAATATTGGTGC+TGG | + | chr1.4:84727512-84727531 | MS.gene029391:CDS | 55.0% | |
| GTAGGAGCAGCACTTGTCTG+TGG | - | chr1.4:84726520-84726539 | None:intergenic | 55.0% | |
| GTTGCCGAGGATATAGGAGC+AGG | - | chr1.4:84726751-84726770 | None:intergenic | 55.0% | |
| GTTGCCGGTAGCAACTTGGA+GGG | + | chr1.4:84726957-84726976 | MS.gene029391:CDS | 55.0% | |
| TCAAGCTCCTGCTGCAACTG+CGG | + | chr1.4:84726567-84726586 | MS.gene029391:CDS | 55.0% | |
| TCAATAGCTTGGCGCTCCTC+GGG | - | chr1.4:84728107-84728126 | None:intergenic | 55.0% | |
| TCCTCTAGACCTCTTTCCCC+AGG | + | chr1.4:84727417-84727436 | MS.gene029391:CDS | 55.0% | |
| TCTGGTTGCCGGTAGCAACT+TGG | + | chr1.4:84726953-84726972 | MS.gene029391:CDS | 55.0% | |
| TGGGCAGGCTGCATCTAATC+TGG | + | chr1.4:84726935-84726954 | MS.gene029391:CDS | 55.0% | |
| ! | GAAGGTGCAGCAACAGATGC+AGG | - | chr1.4:84726715-84726734 | None:intergenic | 55.0% |
| ! | GCTGGAGCTTCAGCTTGTTC+GGG | - | chr1.4:84727289-84727308 | None:intergenic | 55.0% |
| AGTAAGCCCGCGTCTGGTGA+AGG | + | chr1.4:84726319-84726338 | MS.gene029391:CDS | 60.0% | |
| ATAGGAGCAGGAGCTGGAGC+TGG | - | chr1.4:84726739-84726758 | None:intergenic | 60.0% | |
| GAACCTATGGAGGGCGGAGA+AGG | + | chr1.4:84727890-84727909 | MS.gene029391:CDS | 60.0% | |
| GACACTGGGGGGGTTGAAGT+AGG | - | chr1.4:84726538-84726557 | None:intergenic | 60.0% | |
| GCAGTTGCAGCAGGAGCTTG+AGG | - | chr1.4:84726568-84726587 | None:intergenic | 60.0% | |
| GCTGCAGCCTCAGGATTCAC+AGG | - | chr1.4:84727340-84727359 | None:intergenic | 60.0% | |
| GGGAGGAGGAAGCTGGGATA+GGG | + | chr1.4:84727004-84727023 | MS.gene029391:CDS | 60.0% | |
| GGTTGCCGGTAGCAACTTGG+AGG | + | chr1.4:84726956-84726975 | MS.gene029391:CDS | 60.0% | |
| GTAAGCCCGCGTCTGGTGAA+GGG | + | chr1.4:84726320-84726339 | MS.gene029391:CDS | 60.0% | |
| GTAGACCCTTCACCAGACGC+GGG | - | chr1.4:84726328-84726347 | None:intergenic | 60.0% | |
| GTTGTGCACTTGCAGGCGCT+CGG | - | chr1.4:84727318-84727337 | None:intergenic | 60.0% | |
| TAGGAGCAGGAGCTGGAGCT+GGG | - | chr1.4:84726738-84726757 | None:intergenic | 60.0% | |
| TGGGAGGAGGAAGCTGGGAT+AGG | + | chr1.4:84727003-84727022 | MS.gene029391:CDS | 60.0% | |
| TTGTGCACTTGCAGGCGCTC+GGG | - | chr1.4:84727317-84727336 | None:intergenic | 60.0% | |
| AGGAGCAGGAGCTGGAGCTG+GGG | - | chr1.4:84726737-84726756 | None:intergenic | 65.0% | |
| CACCCTTCTCCGCCCTCCAT+AGG | - | chr1.4:84727896-84727915 | None:intergenic | 65.0% | |
| GGAGCAGGCTGAGCTGCTTG+TGG | - | chr1.4:84727370-84727389 | None:intergenic | 65.0% | |
| TGGCAGAGTAAGCCCGCGTC+TGG | + | chr1.4:84726313-84726332 | MS.gene029391:intron | 65.0% | |
| !! | TGCTGCTGGTGCCGGTTCTC+TGG | + | chr1.4:84727535-84727554 | MS.gene029391:CDS | 65.0% |
| GCAGGAGCTGGAGCTGGGGA+AGG | - | chr1.4:84726733-84726752 | None:intergenic | 70.0% | |
| GGAGCTGCAGCTGCAGCCTC+AGG | - | chr1.4:84727349-84727368 | None:intergenic | 70.0% | |
| !! | CACGGTGCCGCAGTTGCAGC+AGG | - | chr1.4:84726577-84726596 | None:intergenic | 70.0% |
| !! | GGTGCTGGTGCTGCTGGTGC+CGG | + | chr1.4:84727527-84727546 | MS.gene029391:CDS | 70.0% |
| GCAGGCGCTCGGGACACTGC+TGG | - | chr1.4:84727307-84727326 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 84724894 | 84728646 | 84724894 | ID=MS.gene029391 |
| chr1.4 | mRNA | 84724894 | 84728646 | 84724894 | ID=MS.gene029391.t1;Parent=MS.gene029391 |
| chr1.4 | exon | 84724894 | 84724959 | 84724894 | ID=MS.gene029391.t1.exon1;Parent=MS.gene029391.t1 |
| chr1.4 | CDS | 84724894 | 84724959 | 84724894 | ID=cds.MS.gene029391.t1;Parent=MS.gene029391.t1 |
| chr1.4 | exon | 84725778 | 84725939 | 84725778 | ID=MS.gene029391.t1.exon2;Parent=MS.gene029391.t1 |
| chr1.4 | CDS | 84725778 | 84725939 | 84725778 | ID=cds.MS.gene029391.t1;Parent=MS.gene029391.t1 |
| chr1.4 | exon | 84726319 | 84726372 | 84726319 | ID=MS.gene029391.t1.exon3;Parent=MS.gene029391.t1 |
| chr1.4 | CDS | 84726319 | 84726372 | 84726319 | ID=cds.MS.gene029391.t1;Parent=MS.gene029391.t1 |
| chr1.4 | exon | 84726514 | 84726593 | 84726514 | ID=MS.gene029391.t1.exon4;Parent=MS.gene029391.t1 |
| chr1.4 | CDS | 84726514 | 84726593 | 84726514 | ID=cds.MS.gene029391.t1;Parent=MS.gene029391.t1 |
| chr1.4 | exon | 84726711 | 84726776 | 84726711 | ID=MS.gene029391.t1.exon5;Parent=MS.gene029391.t1 |
| chr1.4 | CDS | 84726711 | 84726776 | 84726711 | ID=cds.MS.gene029391.t1;Parent=MS.gene029391.t1 |
| chr1.4 | exon | 84726917 | 84727094 | 84726917 | ID=MS.gene029391.t1.exon6;Parent=MS.gene029391.t1 |
| chr1.4 | CDS | 84726917 | 84727094 | 84726917 | ID=cds.MS.gene029391.t1;Parent=MS.gene029391.t1 |
| chr1.4 | exon | 84727280 | 84727438 | 84727280 | ID=MS.gene029391.t1.exon7;Parent=MS.gene029391.t1 |
| chr1.4 | CDS | 84727280 | 84727438 | 84727280 | ID=cds.MS.gene029391.t1;Parent=MS.gene029391.t1 |
| chr1.4 | exon | 84727512 | 84727580 | 84727512 | ID=MS.gene029391.t1.exon8;Parent=MS.gene029391.t1 |
| chr1.4 | CDS | 84727512 | 84727580 | 84727512 | ID=cds.MS.gene029391.t1;Parent=MS.gene029391.t1 |
| chr1.4 | exon | 84727681 | 84727728 | 84727681 | ID=MS.gene029391.t1.exon9;Parent=MS.gene029391.t1 |
| chr1.4 | CDS | 84727681 | 84727728 | 84727681 | ID=cds.MS.gene029391.t1;Parent=MS.gene029391.t1 |
| chr1.4 | exon | 84727803 | 84727912 | 84727803 | ID=MS.gene029391.t1.exon10;Parent=MS.gene029391.t1 |
| chr1.4 | CDS | 84727803 | 84727912 | 84727803 | ID=cds.MS.gene029391.t1;Parent=MS.gene029391.t1 |
| chr1.4 | exon | 84728049 | 84728130 | 84728049 | ID=MS.gene029391.t1.exon11;Parent=MS.gene029391.t1 |
| chr1.4 | CDS | 84728049 | 84728130 | 84728049 | ID=cds.MS.gene029391.t1;Parent=MS.gene029391.t1 |
| chr1.4 | exon | 84728527 | 84728646 | 84728527 | ID=MS.gene029391.t1.exon12;Parent=MS.gene029391.t1 |
| chr1.4 | CDS | 84728527 | 84728646 | 84728527 | ID=cds.MS.gene029391.t1;Parent=MS.gene029391.t1 |
| Gene Sequence |
| Protein sequence |
