Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58585.t1 | XP_003613417.1 | 97.3 | 525 | 11 | 2 | 1 | 525 | 1 | 522 | 0.00E+00 | 1082.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58585.t1 | G7K5L2 | 97.3 | 525 | 11 | 2 | 1 | 525 | 1 | 522 | 0.0e+00 | 1082.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056480 | MS.gene58585 | 0.811343 | 7.34E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene58585 | MS.gene062320 | PPI |
| MS.gene58585 | MS.gene030088 | PPI |
| MS.gene58585 | MS.gene017160 | PPI |
| MS.gene038392 | MS.gene58585 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58585.t1 | MTR_5g036420 | 97.333 | 525 | 11 | 2 | 1 | 525 | 1 | 522 | 0.0 | 1061 |
| MS.gene58585.t1 | MTR_5g092140 | 65.451 | 521 | 171 | 5 | 7 | 525 | 12 | 525 | 0.0 | 729 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58585.t1 | AT1G70160 | 81.028 | 506 | 92 | 3 | 21 | 525 | 21 | 523 | 0.0 | 868 |
| MS.gene58585.t1 | AT4G27020 | 68.254 | 504 | 154 | 4 | 24 | 525 | 24 | 523 | 0.0 | 749 |
| MS.gene58585.t1 | AT5G54870 | 66.206 | 506 | 165 | 4 | 22 | 525 | 30 | 531 | 0.0 | 732 |
| MS.gene58585.t1 | AT5G54870 | 69.647 | 425 | 127 | 2 | 103 | 525 | 1 | 425 | 0.0 | 654 |
Find 140 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTTTAGGAACTCTAAAT+TGG | 0.173776 | 5.3:-24859836 | None:intergenic |
| CTTCCATTCTGCCAGATTCT+TGG | 0.199960 | 5.3:+24862350 | MS.gene58585:CDS |
| AATTTGTGGGTTGGTGAATC+TGG | 0.215887 | 5.3:+24860051 | MS.gene58585:CDS |
| CATGGTGGCGGTGGTGATTC+TGG | 0.240921 | 5.3:+24858470 | MS.gene58585:CDS |
| TTGCTCCCATGTGTTTCTTT+AGG | 0.246809 | 5.3:-24859849 | None:intergenic |
| CGATAGGCCTTCACAATGTT+AGG | 0.317578 | 5.3:+24862460 | MS.gene58585:CDS |
| GGCGGTGGTGATTCTGGTTT+GGG | 0.321629 | 5.3:+24858476 | MS.gene58585:CDS |
| TGTCGAAAATCCGCGGTAGA+TGG | 0.325296 | 5.3:+24859947 | MS.gene58585:CDS |
| TAGAGTAAACGATGTGTTAC+CGG | 0.347530 | 5.3:+24858286 | MS.gene58585:CDS |
| TGAATAGAACCATTATTATA+CGG | 0.354003 | 5.3:-24858395 | None:intergenic |
| AGAATATAGGATGGAATTCC+CGG | 0.354252 | 5.3:+24862373 | MS.gene58585:CDS |
| GATCCTGCAGATGTTCATTC+TGG | 0.368715 | 5.3:+24859910 | MS.gene58585:CDS |
| TACTTGAATGGAGCTAGAAA+TGG | 0.377318 | 5.3:-24862147 | None:intergenic |
| TGGCGGTGGTGATTCTGGTT+TGG | 0.384909 | 5.3:+24858475 | MS.gene58585:CDS |
| GATATTTCTTTCGGTAAAAC+CGG | 0.385622 | 5.3:-24858305 | None:intergenic |
| CAACACCATACCGGATTACA+TGG | 0.387691 | 5.3:+24859541 | MS.gene58585:CDS |
| TAGACCCAATCATCTTGTTC+TGG | 0.389062 | 5.3:-24862053 | None:intergenic |
| CCATTCCAGAACAAGATGAT+TGG | 0.391466 | 5.3:+24862048 | MS.gene58585:CDS |
| CGTGAATTCAGTTACTTGAA+TGG | 0.391949 | 5.3:-24862159 | None:intergenic |
| ACAGGCCATGATATTTCTTT+CGG | 0.397304 | 5.3:-24858314 | None:intergenic |
| AACACATCGTTTACTCTAAA+CGG | 0.397726 | 5.3:-24858281 | None:intergenic |
| TCCTATATTCTCCAAGAATC+TGG | 0.402830 | 5.3:-24862361 | None:intergenic |
| AGTCTGCTTGAAGGATGAAA+TGG | 0.403621 | 5.3:+24860026 | MS.gene58585:CDS |
| GAGTATGCGCGGAGCATGTC+TGG | 0.410468 | 5.3:+24860380 | MS.gene58585:CDS |
| TTCTCATTGTTGCACCATCT+TGG | 0.420280 | 5.3:-24862320 | None:intergenic |
| CTCTATTCTCGAACACTGCA+TGG | 0.427540 | 5.3:+24859803 | MS.gene58585:CDS |
| GTCGAAAATCCGCGGTAGAT+GGG | 0.427564 | 5.3:+24859948 | MS.gene58585:CDS |
| ATAATAATGGTTCTATTCAA+TGG | 0.427948 | 5.3:+24858399 | MS.gene58585:CDS |
| GAAGCGTTGAATAAGCGGTT+AGG | 0.435388 | 5.3:+24861279 | MS.gene58585:CDS |
| ACACTTGAAAAGTGGGTAAC+TGG | 0.438027 | 5.3:+24859982 | MS.gene58585:CDS |
| TGGGTAACTGGTGCATTTGC+TGG | 0.440657 | 5.3:+24859994 | MS.gene58585:CDS |
| TCTCATGCCAGCAGGAATGC+TGG | 0.441672 | 5.3:+24859750 | MS.gene58585:CDS |
| TTCCCACGAATCAAGCTTCA+AGG | 0.441820 | 5.3:-24859592 | None:intergenic |
| TCTGTAACTCCGTATAATAA+TGG | 0.444158 | 5.3:+24858386 | MS.gene58585:CDS |
| GTGGGAAGAGCCAGCAGAGC+TGG | 0.448333 | 5.3:+24859608 | MS.gene58585:CDS |
| ACCGCGAGAAGTGGATGAAA+AGG | 0.448500 | 5.3:-24858206 | None:intergenic |
| ACATCGCTGTTATCGAGTTT+CGG | 0.448881 | 5.3:+24858242 | MS.gene58585:CDS |
| AGGACAGTGCTCATTCATAT+TGG | 0.449083 | 5.3:-24862420 | None:intergenic |
| CATTCAAGTAACTGAATTCA+CGG | 0.450345 | 5.3:+24862160 | MS.gene58585:CDS |
| CACATGTTTGCAGCATAAGC+TGG | 0.450698 | 5.3:-24861252 | None:intergenic |
| GCCAGATTCTTGGAGAATAT+AGG | 0.451080 | 5.3:+24862360 | MS.gene58585:CDS |
| ATTACATATTCCAGCTCTGC+TGG | 0.452756 | 5.3:-24859618 | None:intergenic |
| TATTCTTTCAATGTATAAAG+AGG | 0.460691 | 5.3:+24862109 | MS.gene58585:CDS |
| AGTGGATGAAAAGGAGACAT+TGG | 0.461225 | 5.3:-24858197 | None:intergenic |
| TCCACCTCTTGATGCTCACT+TGG | 0.462178 | 5.3:+24860466 | MS.gene58585:CDS |
| ATCATATTGTGATAACCATA+TGG | 0.464777 | 5.3:-24860407 | None:intergenic |
| CATTCCAGAACAAGATGATT+GGG | 0.468669 | 5.3:+24862049 | MS.gene58585:CDS |
| ATTTGTGGGTTGGTGAATCT+GGG | 0.472063 | 5.3:+24860052 | MS.gene58585:CDS |
| CTTTCAATGTATAAAGAGGC+TGG | 0.479262 | 5.3:+24862113 | MS.gene58585:CDS |
| AGCATGTCTGGCAAGCCATA+TGG | 0.481486 | 5.3:+24860392 | MS.gene58585:CDS |
| TTCGTGATGCATACATGCTT+AGG | 0.484507 | 5.3:+24862270 | MS.gene58585:CDS |
| TCTATTCTCGAACACTGCAT+GGG | 0.488019 | 5.3:+24859804 | MS.gene58585:CDS |
| TCTGTGTTTCTCATGCCAGC+AGG | 0.491314 | 5.3:+24859742 | MS.gene58585:CDS |
| TGCTCATTCATATTGGCATA+AGG | 0.496178 | 5.3:-24862413 | None:intergenic |
| AGTAGTAGTCCCATGTAATC+CGG | 0.498266 | 5.3:-24859551 | None:intergenic |
| TTGAGAAGCGCATTCAGCCT+TGG | 0.501653 | 5.3:+24859875 | MS.gene58585:CDS |
| TCATACAGCAGTCTGCTTGA+AGG | 0.504325 | 5.3:+24860017 | MS.gene58585:CDS |
| TCACCAGAATGAACATCTGC+AGG | 0.505114 | 5.3:-24859913 | None:intergenic |
| AAGCGTTGAATAAGCGGTTA+GGG | 0.506168 | 5.3:+24861280 | MS.gene58585:CDS |
| ACGATCAAAACCGCGAGAAG+TGG | 0.507394 | 5.3:-24858215 | None:intergenic |
| GTCTGCTTGAAGGATGAAAT+GGG | 0.509012 | 5.3:+24860027 | MS.gene58585:CDS |
| ACTTGAATGGAGCTAGAAAT+GGG | 0.509499 | 5.3:-24862146 | None:intergenic |
| TCTCCAAGAATCTGGCAGAA+TGG | 0.509583 | 5.3:-24862353 | None:intergenic |
| CTCATGCCAGCAGGAATGCT+GGG | 0.514236 | 5.3:+24859751 | MS.gene58585:CDS |
| GGAACCAAAGTGTTATAGCC+CGG | 0.517137 | 5.3:-24862392 | None:intergenic |
| ATTCAACTCCACTGCAGCAT+GGG | 0.517149 | 5.3:+24860358 | MS.gene58585:CDS |
| CATGCAGTGTTCGAGAATAG+AGG | 0.517556 | 5.3:-24859802 | None:intergenic |
| TGGTGCCGTTCTCTATCTCA+AGG | 0.519495 | 5.3:+24858499 | MS.gene58585:CDS |
| AGACAGGGGAAGCACACAGC+TGG | 0.519722 | 5.3:+24859493 | MS.gene58585:intron |
| TGGTAATTCCATGGCATGAA+TGG | 0.520928 | 5.3:+24860261 | MS.gene58585:CDS |
| CGCATACTCCCATGCTGCAG+TGG | 0.522094 | 5.3:-24860366 | None:intergenic |
| TTGTACAGGTAAAGCAGCAT+GGG | 0.528303 | 5.3:+24859716 | MS.gene58585:intron |
| CCAATCATCTTGTTCTGGAA+TGG | 0.530482 | 5.3:-24862048 | None:intergenic |
| ATTCCCGGGCTATAACACTT+TGG | 0.537660 | 5.3:+24862388 | MS.gene58585:CDS |
| GCCTATCGTAAGTTGGAGGA+AGG | 0.540693 | 5.3:-24862445 | None:intergenic |
| GGATGAAATGGGAAATTTGT+GGG | 0.541042 | 5.3:+24860038 | MS.gene58585:CDS |
| TACCTTGAAGCTTGATTCGT+GGG | 0.541678 | 5.3:+24859590 | MS.gene58585:CDS |
| AAGCAATGCTATCTGTGGGT+TGG | 0.543286 | 5.3:-24860309 | None:intergenic |
| AAATAATTGTGGTAATTCCA+TGG | 0.547273 | 5.3:+24860252 | MS.gene58585:CDS |
| ATCTGGGCATGAGAATGAAA+AGG | 0.548561 | 5.3:+24860068 | MS.gene58585:CDS |
| GTTACAGATCCAACAAAAGA+AGG | 0.549064 | 5.3:-24858371 | None:intergenic |
| ATACCTTGAAGCTTGATTCG+TGG | 0.551856 | 5.3:+24859589 | MS.gene58585:CDS |
| ATCAAACACGTCTACCAAGA+TGG | 0.552893 | 5.3:+24862306 | MS.gene58585:CDS |
| GAAATGGGAAATTTGTGGGT+TGG | 0.554717 | 5.3:+24860042 | MS.gene58585:CDS |
| AATGGTTCTATTCAATGGAA+AGG | 0.557896 | 5.3:+24858404 | MS.gene58585:CDS |
| TCGAAAATCCGCGGTAGATG+GGG | 0.560142 | 5.3:+24859949 | MS.gene58585:CDS |
| TGGGAAGCTGCTCTTAAAGA+TGG | 0.564571 | 5.3:+24860284 | MS.gene58585:CDS |
| GAGTTTACTCACCATGGTGG+CGG | 0.565715 | 5.3:+24858458 | MS.gene58585:CDS |
| GAACCAAAGTGTTATAGCCC+GGG | 0.566880 | 5.3:-24862391 | None:intergenic |
| TGTGAAGGCCTATCGTAAGT+TGG | 0.567007 | 5.3:-24862452 | None:intergenic |
| AGTGTACCCAGCATTCCTGC+TGG | 0.572600 | 5.3:-24859757 | None:intergenic |
| AAGTGAGCATCAAGAGGTGG+AGG | 0.573957 | 5.3:-24860464 | None:intergenic |
| TTTACTCACCATGGTGGCGG+TGG | 0.576073 | 5.3:+24858461 | MS.gene58585:CDS |
| GCTTCCCACCATTCATGCCA+TGG | 0.578286 | 5.3:-24860269 | None:intergenic |
| TAGTCCCATGTAATCCGGTA+TGG | 0.582459 | 5.3:-24859546 | None:intergenic |
| CCCTTCCTCCAACTTACGAT+AGG | 0.583898 | 5.3:+24862444 | MS.gene58585:CDS |
| ATTGTACAGGTAAAGCAGCA+TGG | 0.586593 | 5.3:+24859715 | MS.gene58585:intron |
| AATTCAACTCCACTGCAGCA+TGG | 0.587395 | 5.3:+24860357 | MS.gene58585:CDS |
| AGCACACAGCTGGACCTGCA+TGG | 0.588519 | 5.3:+24859503 | MS.gene58585:CDS |
| TGAAACCTTGAGATAGAGAA+CGG | 0.589505 | 5.3:-24858504 | None:intergenic |
| CAGAATCACCACCGCCACCA+TGG | 0.592744 | 5.3:-24858469 | None:intergenic |
| GCACGCAACTCTGGATGTAG+AGG | 0.595924 | 5.3:-24860332 | None:intergenic |
| TACTTGAGACTGAGAAGCGT+GGG | 0.595984 | 5.3:+24862003 | MS.gene58585:CDS |
| TAATTTCTGTCATGTCTATG+TGG | 0.596021 | 5.3:+24861217 | MS.gene58585:CDS |
| CTGCAGCATGGGAGTATGCG+CGG | 0.597192 | 5.3:+24860369 | MS.gene58585:CDS |
| AGGATGAAATGGGAAATTTG+TGG | 0.602138 | 5.3:+24860037 | MS.gene58585:CDS |
| CTGTCATGTCTATGTGGACA+AGG | 0.604457 | 5.3:+24861223 | MS.gene58585:CDS |
| TCGTAAGTTGGAGGAAGGGA+AGG | 0.604565 | 5.3:-24862440 | None:intergenic |
| AGAGGAAGCAATGCTATCTG+TGG | 0.608658 | 5.3:-24860314 | None:intergenic |
| AGAGTTCCTAAAGAAACACA+TGG | 0.618940 | 5.3:+24859843 | MS.gene58585:CDS |
| TAATTCCATGGCATGAATGG+TGG | 0.622802 | 5.3:+24860264 | MS.gene58585:CDS |
| GATTCTTGGAGAATATAGGA+TGG | 0.622969 | 5.3:+24862364 | MS.gene58585:CDS |
| AAACTTGAGTTTACTCACCA+TGG | 0.626316 | 5.3:+24858452 | MS.gene58585:CDS |
| GGTGGTGATTCTGGTTTGGG+TGG | 0.629701 | 5.3:+24858479 | MS.gene58585:CDS |
| GGAATGAAGCGTTGAATAAG+CGG | 0.630610 | 5.3:+24861274 | MS.gene58585:CDS |
| GAATATAGGATGGAATTCCC+GGG | 0.632103 | 5.3:+24862374 | MS.gene58585:CDS |
| GGATCAATAGTTGCACGCCA+AGG | 0.634221 | 5.3:-24859892 | None:intergenic |
| GAAAACATACAGATCCATGC+AGG | 0.634933 | 5.3:-24859517 | None:intergenic |
| GATGATTGGGTCTACAGTGA+CGG | 0.635442 | 5.3:+24862062 | MS.gene58585:CDS |
| CGATCAACCTAACATTGTGA+AGG | 0.636736 | 5.3:-24862467 | None:intergenic |
| CCTATCGTAAGTTGGAGGAA+GGG | 0.638531 | 5.3:-24862444 | None:intergenic |
| ACCAAGTGAGCATCAAGAGG+TGG | 0.639800 | 5.3:-24860467 | None:intergenic |
| CAGCTTATGCTGCAAACATG+TGG | 0.640388 | 5.3:+24861253 | MS.gene58585:CDS |
| AAAATCCGCGGTAGATGGGG+AGG | 0.643180 | 5.3:+24859952 | MS.gene58585:CDS |
| AATTCCATGGCATGAATGGT+GGG | 0.644394 | 5.3:+24860265 | MS.gene58585:CDS |
| CTATTCTCGAACACTGCATG+GGG | 0.649767 | 5.3:+24859805 | MS.gene58585:CDS |
| GAAGGCCTATCGTAAGTTGG+AGG | 0.653840 | 5.3:-24862449 | None:intergenic |
| AATACCAAGTGAGCATCAAG+AGG | 0.657319 | 5.3:-24860470 | None:intergenic |
| GAATAAGCGGTTAGGGACTG+AGG | 0.662387 | 5.3:+24861287 | MS.gene58585:CDS |
| CGGAAAGTCAACAACATGTG+TGG | 0.663104 | 5.3:+24862082 | MS.gene58585:CDS |
| CAAAACCTCCCCATCTACCG+CGG | 0.663802 | 5.3:-24859957 | None:intergenic |
| AACACCATACCGGATTACAT+GGG | 0.665103 | 5.3:+24859542 | MS.gene58585:CDS |
| CTACTTGAGACTGAGAAGCG+TGG | 0.666781 | 5.3:+24862002 | MS.gene58585:CDS |
| CTATGAAAATTATTCAACAC+AGG | 0.669825 | 5.3:-24858332 | None:intergenic |
| GCAGGGTGAAGAAATAATTG+TGG | 0.670393 | 5.3:+24860241 | MS.gene58585:intron |
| TGTACAGGTAAAGCAGCATG+GGG | 0.684818 | 5.3:+24859717 | MS.gene58585:intron |
| GAGGAAGCAATGCTATCTGT+GGG | 0.686592 | 5.3:-24860313 | None:intergenic |
| TTGGCTGTGTCGAAAATCCG+CGG | 0.695554 | 5.3:+24859940 | MS.gene58585:CDS |
| GAGTTCCTAAAGAAACACAT+GGG | 0.697196 | 5.3:+24859844 | MS.gene58585:CDS |
| CTTGAGTTTACTCACCATGG+TGG | 0.712375 | 5.3:+24858455 | MS.gene58585:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATTTGTAATTTATCT+TGG | - | chr5.3:24861498-24861517 | None:intergenic | 10.0% |
| !! | AAATGATTATGATTAATCTT+AGG | - | chr5.3:24859179-24859198 | None:intergenic | 15.0% |
| !! | AAATTTACAAAATAAACTTG+TGG | - | chr5.3:24859431-24859450 | None:intergenic | 15.0% |
| !! | AATTATATTCAATTGGAATT+TGG | + | chr5.3:24859225-24859244 | MS.gene58585:intron | 15.0% |
| !! | ACATTAAACAAATTTATAGA+TGG | - | chr5.3:24861788-24861807 | None:intergenic | 15.0% |
| !! | ATCTGATAATTATATTCAAT+TGG | + | chr5.3:24859218-24859237 | MS.gene58585:intron | 15.0% |
| !! | TAAATTACAAATAAATTGAG+AGG | + | chr5.3:24861501-24861520 | MS.gene58585:intron | 15.0% |
| !!! | TATGATTTTCTTTTAAAAGA+GGG | + | chr5.3:24860966-24860985 | MS.gene58585:intron | 15.0% |
| !!! | TCAAGTTTGTTTTTAAAAAA+GGG | - | chr5.3:24858870-24858889 | None:intergenic | 15.0% |
| !!! | TTATGATTTTCTTTTAAAAG+AGG | + | chr5.3:24860965-24860984 | MS.gene58585:intron | 15.0% |
| !!! | TTTATATTACTCTCTTTTTT+TGG | - | chr5.3:24860542-24860561 | None:intergenic | 15.0% |
| !! | AAAAATAAATTCTACTTTGG+AGG | - | chr5.3:24858598-24858617 | None:intergenic | 20.0% |
| !! | AAAATAAATTCTACTTTGGA+GGG | - | chr5.3:24858597-24858616 | None:intergenic | 20.0% |
| !! | AAGAAATAGTTTAGTCTATT+TGG | + | chr5.3:24860695-24860714 | MS.gene58585:intron | 20.0% |
| !! | AGAAATAGTTTAGTCTATTT+GGG | + | chr5.3:24860696-24860715 | MS.gene58585:intron | 20.0% |
| !! | AGGAAAAATAAATTCTACTT+TGG | - | chr5.3:24858601-24858620 | None:intergenic | 20.0% |
| !! | ATGATGTAGCTATATTTAAA+TGG | - | chr5.3:24859095-24859114 | None:intergenic | 20.0% |
| !! | ATGTAATGTACTAAGTATAA+AGG | + | chr5.3:24861660-24861679 | MS.gene58585:intron | 20.0% |
| !! | GAACATTTAGTAAAAGATAA+AGG | + | chr5.3:24861748-24861767 | MS.gene58585:intron | 20.0% |
| !! | GAGTAATATAAATATTGAAC+CGG | + | chr5.3:24860550-24860569 | MS.gene58585:intron | 20.0% |
| !! | TAGAATATATATTTAGCTGA+AGG | + | chr5.3:24860583-24860602 | MS.gene58585:intron | 20.0% |
| !! | TATTCTTTCAATGTATAAAG+AGG | + | chr5.3:24862109-24862128 | MS.gene58585:CDS | 20.0% |
| !! | TATTTACTAATGGTATGTTT+GGG | - | chr5.3:24860921-24860940 | None:intergenic | 20.0% |
| !! | TGAATAGAACCATTATTATA+CGG | - | chr5.3:24858398-24858417 | None:intergenic | 20.0% |
| !! | TGATGTAGCTATATTTAAAT+GGG | - | chr5.3:24859094-24859113 | None:intergenic | 20.0% |
| !! | TTACATTTAGTATGGAATTT+AGG | + | chr5.3:24861415-24861434 | MS.gene58585:intron | 20.0% |
| !!! | AATGATTCTAAAAAAGAATG+AGG | - | chr5.3:24860831-24860850 | None:intergenic | 20.0% |
| !!! | ACATTTTGAGAAAATCAAAT+TGG | - | chr5.3:24860153-24860172 | None:intergenic | 20.0% |
| !!! | ATAATAATGGTTCTATTCAA+TGG | + | chr5.3:24858399-24858418 | MS.gene58585:CDS | 20.0% |
| !!! | ATGATTGTTTTACAATTAGT+GGG | + | chr5.3:24861935-24861954 | MS.gene58585:intron | 20.0% |
| !!! | CTCAAGTTTGTTTTTAAAAA+AGG | - | chr5.3:24858871-24858890 | None:intergenic | 20.0% |
| !!! | TTTTACATTGCATGAAAAAT+TGG | + | chr5.3:24861564-24861583 | MS.gene58585:intron | 20.0% |
| ! | AAATAATTGTGGTAATTCCA+TGG | + | chr5.3:24860252-24860271 | MS.gene58585:CDS | 25.0% |
| ! | AATGAAAGAACCAAAAATCA+AGG | - | chr5.3:24861607-24861626 | None:intergenic | 25.0% |
| ! | AGAATGAAAAGGTAAAAATG+TGG | + | chr5.3:24860079-24860098 | MS.gene58585:intron | 25.0% |
| ! | AGTTATGTGATCATATATCA+TGG | - | chr5.3:24860801-24860820 | None:intergenic | 25.0% |
| ! | ATCATATTGTGATAACCATA+TGG | - | chr5.3:24860410-24860429 | None:intergenic | 25.0% |
| ! | CCACATGAAAGTAAAAAAAA+AGG | - | chr5.3:24861364-24861383 | None:intergenic | 25.0% |
| ! | CTATGAAAATTATTCAACAC+AGG | - | chr5.3:24858335-24858354 | None:intergenic | 25.0% |
| ! | CTATTTACTAATGGTATGTT+TGG | - | chr5.3:24860922-24860941 | None:intergenic | 25.0% |
| ! | GACATTAGTTACATTTAGTA+TGG | + | chr5.3:24861407-24861426 | MS.gene58585:intron | 25.0% |
| ! | TATATTCTACACAAAAATGC+CGG | - | chr5.3:24860572-24860591 | None:intergenic | 25.0% |
| ! | TCCTTAATAAAGTAATACAG+CGG | - | chr5.3:24860609-24860628 | None:intergenic | 25.0% |
| ! | TTGAGAAAATCAAATTGGAT+AGG | - | chr5.3:24860148-24860167 | None:intergenic | 25.0% |
| ! | TTTAGATTGAAGTGTATGTT+TGG | - | chr5.3:24858800-24858819 | None:intergenic | 25.0% |
| !! | ACTCAATTAATTTTTCTTGC+TGG | + | chr5.3:24858770-24858789 | MS.gene58585:intron | 25.0% |
| !! | AGAATATCATTAGTCTATAC+AGG | + | chr5.3:24860191-24860210 | MS.gene58585:intron | 25.0% |
| !! | AGTGATGGTATCTTATTTAT+GGG | + | chr5.3:24859251-24859270 | MS.gene58585:intron | 25.0% |
| !! | ATCACAATATGATTTTCAGT+TGG | + | chr5.3:24860417-24860436 | MS.gene58585:CDS | 25.0% |
| !! | GGTAAAAATGTGGAATTTTA+TGG | + | chr5.3:24860089-24860108 | MS.gene58585:intron | 25.0% |
| !! | TCCTTCAAACAAAAGTATAA+AGG | + | chr5.3:24861685-24861704 | MS.gene58585:intron | 25.0% |
| !! | TCTGCTGAAAATATAGTTTT+TGG | + | chr5.3:24859462-24859481 | MS.gene58585:intron | 25.0% |
| !! | TTATAGATGGCTAAAGTTTT+TGG | - | chr5.3:24861775-24861794 | None:intergenic | 25.0% |
| !! | TTTCTTTAGGAACTCTAAAT+TGG | - | chr5.3:24859839-24859858 | None:intergenic | 25.0% |
| !! | TTTTACCGAAAGAAATATCA+TGG | + | chr5.3:24858309-24858328 | MS.gene58585:CDS | 25.0% |
| !! | TTTTATACTTTGCATCATTG+AGG | + | chr5.3:24861472-24861491 | MS.gene58585:intron | 25.0% |
| !!! | ATGGCTTATTGTTTTATTTC+AGG | + | chr5.3:24861534-24861553 | MS.gene58585:intron | 25.0% |
| !!! | ATTTTCTTTTAAAAGAGGGA+AGG | + | chr5.3:24860970-24860989 | MS.gene58585:intron | 25.0% |
| !!! | CCTTTTTTTTTACTTTCATG+TGG | + | chr5.3:24861361-24861380 | MS.gene58585:intron | 25.0% |
| !!! | GATGATTGTTTTACAATTAG+TGG | + | chr5.3:24861934-24861953 | MS.gene58585:intron | 25.0% |
| !!! | TCCTTTATACTTTTGTTTGA+AGG | - | chr5.3:24861689-24861708 | None:intergenic | 25.0% |
| !!! | TTCTTTCATTACTGTTTTGA+TGG | + | chr5.3:24861617-24861636 | MS.gene58585:intron | 25.0% |
| !!! | TTTTGTCTGAAACTTTTTGT+TGG | + | chr5.3:24859660-24859679 | MS.gene58585:intron | 25.0% |
| AAATTCTCACTGTATTGTAC+AGG | + | chr5.3:24859702-24859721 | MS.gene58585:intron | 30.0% | |
| AACACATCGTTTACTCTAAA+CGG | - | chr5.3:24858284-24858303 | None:intergenic | 30.0% | |
| AATAGTTTAGTCTATTTGGG+AGG | + | chr5.3:24860699-24860718 | MS.gene58585:intron | 30.0% | |
| AGATAGTTCATCACTTCATT+GGG | + | chr5.3:24859290-24859309 | MS.gene58585:intron | 30.0% | |
| AGTTACTCTTACACAAACAA+TGG | - | chr5.3:24860504-24860523 | None:intergenic | 30.0% | |
| ATAGTTTAGTCTATTTGGGA+GGG | + | chr5.3:24860700-24860719 | MS.gene58585:intron | 30.0% | |
| ATGAAGTGATGAACTATCTA+AGG | - | chr5.3:24859289-24859308 | None:intergenic | 30.0% | |
| CAGAAACACATTGAGATTAT+AGG | - | chr5.3:24861446-24861465 | None:intergenic | 30.0% | |
| CATATTCAATACAACTTGTG+AGG | - | chr5.3:24861855-24861874 | None:intergenic | 30.0% | |
| CATTAGTAAATAGTGCATTC+AGG | + | chr5.3:24860929-24860948 | MS.gene58585:intron | 30.0% | |
| CATTCAAGTAACTGAATTCA+CGG | + | chr5.3:24862160-24862179 | MS.gene58585:CDS | 30.0% | |
| CTATAATCTCAATGTGTTTC+TGG | + | chr5.3:24861444-24861463 | MS.gene58585:intron | 30.0% | |
| CTGAATGCACTATTTACTAA+TGG | - | chr5.3:24860931-24860950 | None:intergenic | 30.0% | |
| GAAACAATTTGAATCATGAC+TGG | + | chr5.3:24860658-24860677 | MS.gene58585:intron | 30.0% | |
| GATATTTCTTTCGGTAAAAC+CGG | - | chr5.3:24858308-24858327 | None:intergenic | 30.0% | |
| TAATTTCTGTCATGTCTATG+TGG | + | chr5.3:24861217-24861236 | MS.gene58585:CDS | 30.0% | |
| TACGATTACAGAAACTTAAG+TGG | + | chr5.3:24861889-24861908 | MS.gene58585:intron | 30.0% | |
| TAGATAGTTCATCACTTCAT+TGG | + | chr5.3:24859289-24859308 | MS.gene58585:intron | 30.0% | |
| TCAGGTAGAATAAATTATGG+AGG | - | chr5.3:24858621-24858640 | None:intergenic | 30.0% | |
| TCCATAATTTATTCTACCTG+AGG | + | chr5.3:24858620-24858639 | MS.gene58585:intron | 30.0% | |
| TCTAACAAATAGCAATCAGT+TGG | - | chr5.3:24860640-24860659 | None:intergenic | 30.0% | |
| TCTGTAACTCCGTATAATAA+TGG | + | chr5.3:24858386-24858405 | MS.gene58585:CDS | 30.0% | |
| ! | AATGGTTCTATTCAATGGAA+AGG | + | chr5.3:24858404-24858423 | MS.gene58585:CDS | 30.0% |
| ! | AGACTAATGATATTCTGAGA+CGG | - | chr5.3:24860187-24860206 | None:intergenic | 30.0% |
| ! | CAGTGATGGTATCTTATTTA+TGG | + | chr5.3:24859250-24859269 | MS.gene58585:intron | 30.0% |
| ! | GTGATGGTATCTTATTTATG+GGG | + | chr5.3:24859252-24859271 | MS.gene58585:intron | 30.0% |
| ! | TATAAAGAGGCTGGAATTTT+CGG | + | chr5.3:24862122-24862141 | MS.gene58585:CDS | 30.0% |
| !! | ACAATTCATTTTGGCATGTT+TGG | + | chr5.3:24858569-24858588 | MS.gene58585:intron | 30.0% |
| !! | TTTCGCAAAATTTGAGTTGA+AGG | - | chr5.3:24858742-24858761 | None:intergenic | 30.0% |
| !!! | TGTTCATTCTGGTGATTTTT+TGG | + | chr5.3:24859921-24859940 | MS.gene58585:CDS | 30.0% |
| !!! | TTTTGAGACACTTGAAAAGT+GGG | + | chr5.3:24859975-24859994 | MS.gene58585:CDS | 30.0% |
| AAACTTGAGTTTACTCACCA+TGG | + | chr5.3:24858452-24858471 | MS.gene58585:CDS | 35.0% | |
| ACAGATCAAACGTTGCAAAA+AGG | - | chr5.3:24859123-24859142 | None:intergenic | 35.0% | |
| ACAGGCCATGATATTTCTTT+CGG | - | chr5.3:24858317-24858336 | None:intergenic | 35.0% | |
| ACTTGAATGGAGCTAGAAAT+GGG | - | chr5.3:24862149-24862168 | None:intergenic | 35.0% | |
| AGAATATAGGATGGAATTCC+CGG | + | chr5.3:24862373-24862392 | MS.gene58585:CDS | 35.0% | |
| AGAGTTCCTAAAGAAACACA+TGG | + | chr5.3:24859843-24859862 | MS.gene58585:CDS | 35.0% | |
| AGATCAAACGTTGCAAAAAG+GGG | - | chr5.3:24859121-24859140 | None:intergenic | 35.0% | |
| AGGATGAAATGGGAAATTTG+TGG | + | chr5.3:24860037-24860056 | MS.gene58585:CDS | 35.0% | |
| ATAGTTCATCACTTCATTGG+GGG | + | chr5.3:24859292-24859311 | MS.gene58585:intron | 35.0% | |
| ATTGAGAGGACATATCTACA+TGG | + | chr5.3:24861515-24861534 | MS.gene58585:intron | 35.0% | |
| CAGATCAAACGTTGCAAAAA+GGG | - | chr5.3:24859122-24859141 | None:intergenic | 35.0% | |
| CATTCCAGAACAAGATGATT+GGG | + | chr5.3:24862049-24862068 | MS.gene58585:CDS | 35.0% | |
| CGTGAATTCAGTTACTTGAA+TGG | - | chr5.3:24862162-24862181 | None:intergenic | 35.0% | |
| CTTTATCATCAGTTAAGTGC+TGG | + | chr5.3:24859015-24859034 | MS.gene58585:intron | 35.0% | |
| CTTTCAATGTATAAAGAGGC+TGG | + | chr5.3:24862113-24862132 | MS.gene58585:CDS | 35.0% | |
| GAGTTCCTAAAGAAACACAT+GGG | + | chr5.3:24859844-24859863 | MS.gene58585:CDS | 35.0% | |
| GATAGTTCATCACTTCATTG+GGG | + | chr5.3:24859291-24859310 | MS.gene58585:intron | 35.0% | |
| GATTCTTGGAGAATATAGGA+TGG | + | chr5.3:24862364-24862383 | MS.gene58585:CDS | 35.0% | |
| GCCGCTGTATTACTTTATTA+AGG | + | chr5.3:24860605-24860624 | MS.gene58585:intron | 35.0% | |
| GCCTCAGGTAGAATAAATTA+TGG | - | chr5.3:24858624-24858643 | None:intergenic | 35.0% | |
| GGATGAAATGGGAAATTTGT+GGG | + | chr5.3:24860038-24860057 | MS.gene58585:CDS | 35.0% | |
| GTATTGTATTTGAGAACCAC+AGG | - | chr5.3:24861078-24861097 | None:intergenic | 35.0% | |
| GTTACAGATCCAACAAAAGA+AGG | - | chr5.3:24858374-24858393 | None:intergenic | 35.0% | |
| TACTTGAATGGAGCTAGAAA+TGG | - | chr5.3:24862150-24862169 | None:intergenic | 35.0% | |
| TAGAGTAAACGATGTGTTAC+CGG | + | chr5.3:24858286-24858305 | MS.gene58585:CDS | 35.0% | |
| TAGTTTAGTCTATTTGGGAG+GGG | + | chr5.3:24860701-24860720 | MS.gene58585:intron | 35.0% | |
| TCCTATATTCTCCAAGAATC+TGG | - | chr5.3:24862364-24862383 | None:intergenic | 35.0% | |
| TCTCTATTCTTCATTTCCTG+TGG | + | chr5.3:24861059-24861078 | MS.gene58585:intron | 35.0% | |
| TGAAACCTTGAGATAGAGAA+CGG | - | chr5.3:24858507-24858526 | None:intergenic | 35.0% | |
| TGATGCTACTATGATCACTT+GGG | + | chr5.3:24858935-24858954 | MS.gene58585:intron | 35.0% | |
| TGCTCATTCATATTGGCATA+AGG | - | chr5.3:24862416-24862435 | None:intergenic | 35.0% | |
| TTAATCAATCCAACGAACAG+CGG | - | chr5.3:24859380-24859399 | None:intergenic | 35.0% | |
| TTCAGCATTGCAGAAATACA+GGG | - | chr5.3:24861009-24861028 | None:intergenic | 35.0% | |
| ! | AGTCTTCATGCCTTGATTTT+TGG | + | chr5.3:24861594-24861613 | MS.gene58585:intron | 35.0% |
| ! | ATTGGAATTTGGAACAGTGA+TGG | + | chr5.3:24859236-24859255 | MS.gene58585:intron | 35.0% |
| ! | GTTGCGTGTACAATTCATTT+TGG | + | chr5.3:24858560-24858579 | MS.gene58585:intron | 35.0% |
| !! | CTTGTAGGTTCTAGTTCTTT+GGG | + | chr5.3:24861130-24861149 | MS.gene58585:intron | 35.0% |
| !! | GATTTGCTTCCTTCTTTTGT+TGG | + | chr5.3:24858362-24858381 | MS.gene58585:CDS | 35.0% |
| !! | TGTCTGAAACTTTTTGTTGG+TGG | + | chr5.3:24859663-24859682 | MS.gene58585:intron | 35.0% |
| !!! | GTTTTGAGACACTTGAAAAG+TGG | + | chr5.3:24859974-24859993 | MS.gene58585:CDS | 35.0% |
| AACACCATACCGGATTACAT+GGG | + | chr5.3:24859542-24859561 | MS.gene58585:CDS | 40.0% | |
| AACCTACAAGGCTACAACAT+TGG | - | chr5.3:24861120-24861139 | None:intergenic | 40.0% | |
| AATACCAAGTGAGCATCAAG+AGG | - | chr5.3:24860473-24860492 | None:intergenic | 40.0% | |
| AATTCCATGGCATGAATGGT+GGG | + | chr5.3:24860265-24860284 | MS.gene58585:CDS | 40.0% | |
| ACACTTGAAAAGTGGGTAAC+TGG | + | chr5.3:24859982-24860001 | MS.gene58585:CDS | 40.0% | |
| ACATCGCTGTTATCGAGTTT+CGG | + | chr5.3:24858242-24858261 | MS.gene58585:CDS | 40.0% | |
| ACTAATGGTATGTTTGGGAG+AGG | - | chr5.3:24860916-24860935 | None:intergenic | 40.0% | |
| AGGACAGTGCTCATTCATAT+TGG | - | chr5.3:24862423-24862442 | None:intergenic | 40.0% | |
| AGTAGTAGTCCCATGTAATC+CGG | - | chr5.3:24859554-24859573 | None:intergenic | 40.0% | |
| AGTCTGCTTGAAGGATGAAA+TGG | + | chr5.3:24860026-24860045 | MS.gene58585:CDS | 40.0% | |
| AGTTTAGTCTATTTGGGAGG+GGG | + | chr5.3:24860702-24860721 | MS.gene58585:intron | 40.0% | |
| ATCAAACACGTCTACCAAGA+TGG | + | chr5.3:24862306-24862325 | MS.gene58585:CDS | 40.0% | |
| ATCTGGGCATGAGAATGAAA+AGG | + | chr5.3:24860068-24860087 | MS.gene58585:CDS | 40.0% | |
| ATTACATATTCCAGCTCTGC+TGG | - | chr5.3:24859621-24859640 | None:intergenic | 40.0% | |
| ATTGTACAGGTAAAGCAGCA+TGG | + | chr5.3:24859715-24859734 | MS.gene58585:intron | 40.0% | |
| CCAAAGAACTAGAACCTACA+AGG | - | chr5.3:24861132-24861151 | None:intergenic | 40.0% | |
| CCATTCCAGAACAAGATGAT+TGG | + | chr5.3:24862048-24862067 | MS.gene58585:CDS | 40.0% | |
| CTAATGGTATGTTTGGGAGA+GGG | - | chr5.3:24860915-24860934 | None:intergenic | 40.0% | |
| CTGATGCTACTATGATCACT+TGG | + | chr5.3:24858934-24858953 | MS.gene58585:intron | 40.0% | |
| GAAAACATACAGATCCATGC+AGG | - | chr5.3:24859520-24859539 | None:intergenic | 40.0% | |
| GAAATGGGAAATTTGTGGGT+TGG | + | chr5.3:24860042-24860061 | MS.gene58585:CDS | 40.0% | |
| GAATATAGGATGGAATTCCC+GGG | + | chr5.3:24862374-24862393 | MS.gene58585:CDS | 40.0% | |
| GCAGGGTGAAGAAATAATTG+TGG | + | chr5.3:24860241-24860260 | MS.gene58585:intron | 40.0% | |
| GCCAGATTCTTGGAGAATAT+AGG | + | chr5.3:24862360-24862379 | MS.gene58585:CDS | 40.0% | |
| GTCTGCTTGAAGGATGAAAT+GGG | + | chr5.3:24860027-24860046 | MS.gene58585:CDS | 40.0% | |
| GTTCAGCATTGCAGAAATAC+AGG | - | chr5.3:24861010-24861029 | None:intergenic | 40.0% | |
| TAATTCCATGGCATGAATGG+TGG | + | chr5.3:24860264-24860283 | MS.gene58585:CDS | 40.0% | |
| TAGACCCAATCATCTTGTTC+TGG | - | chr5.3:24862056-24862075 | None:intergenic | 40.0% | |
| TCTATTCTCGAACACTGCAT+GGG | + | chr5.3:24859804-24859823 | MS.gene58585:CDS | 40.0% | |
| TCTCAAAGATTGAGTCTGAG+TGG | + | chr5.3:24859067-24859086 | MS.gene58585:intron | 40.0% | |
| TCTCGTTTGTTTGTGCTTTC+AGG | + | chr5.3:24861959-24861978 | MS.gene58585:intron | 40.0% | |
| TGGTAATTCCATGGCATGAA+TGG | + | chr5.3:24860261-24860280 | MS.gene58585:CDS | 40.0% | |
| TTCGTGATGCATACATGCTT+AGG | + | chr5.3:24862270-24862289 | MS.gene58585:CDS | 40.0% | |
| TTCTCATTGTTGCACCATCT+TGG | - | chr5.3:24862323-24862342 | None:intergenic | 40.0% | |
| TTGCTCCCATGTGTTTCTTT+AGG | - | chr5.3:24859852-24859871 | None:intergenic | 40.0% | |
| TTGTACAGGTAAAGCAGCAT+GGG | + | chr5.3:24859716-24859735 | MS.gene58585:intron | 40.0% | |
| TTTCATGTGGAACAATCCTC+TGG | + | chr5.3:24861374-24861393 | MS.gene58585:intron | 40.0% | |
| ! | ATACCTTGAAGCTTGATTCG+TGG | + | chr5.3:24859589-24859608 | MS.gene58585:CDS | 40.0% |
| ! | ATGTTTTCGCAACACCATAC+CGG | + | chr5.3:24859532-24859551 | MS.gene58585:CDS | 40.0% |
| ! | TACCTTGAAGCTTGATTCGT+GGG | + | chr5.3:24859590-24859609 | MS.gene58585:CDS | 40.0% |
| ! | TTGAATTTTGCACGCAACTC+TGG | - | chr5.3:24860344-24860363 | None:intergenic | 40.0% |
| !! | AAGCGTTGAATAAGCGGTTA+GGG | + | chr5.3:24861280-24861299 | MS.gene58585:CDS | 40.0% |
| !! | AAGCTACAATTTCTAGCCTC+AGG | - | chr5.3:24858639-24858658 | None:intergenic | 40.0% |
| !! | AATTTGTGGGTTGGTGAATC+TGG | + | chr5.3:24860051-24860070 | MS.gene58585:CDS | 40.0% |
| !! | ATTTGTGGGTTGGTGAATCT+GGG | + | chr5.3:24860052-24860071 | MS.gene58585:CDS | 40.0% |
| !! | CATGACTGGTTTAGAGTCTT+GGG | + | chr5.3:24860672-24860691 | MS.gene58585:intron | 40.0% |
| !! | CCAATCATCTTGTTCTGGAA+TGG | - | chr5.3:24862051-24862070 | None:intergenic | 40.0% |
| !! | CCTTGTAGGTTCTAGTTCTT+TGG | + | chr5.3:24861129-24861148 | MS.gene58585:intron | 40.0% |
| !! | GGAATGAAGCGTTGAATAAG+CGG | + | chr5.3:24861274-24861293 | MS.gene58585:CDS | 40.0% |
| !! | TACCAATGTTGTAGCCTTGT+AGG | + | chr5.3:24861115-24861134 | MS.gene58585:intron | 40.0% |
| !! | TCATGACTGGTTTAGAGTCT+TGG | + | chr5.3:24860671-24860690 | MS.gene58585:intron | 40.0% |
| !! | TTTTTGGCCGTTTACAGACA+GGG | + | chr5.3:24859478-24859497 | MS.gene58585:intron | 40.0% |
| !!! | AATGTCACTTGTTTTGCCAG+AGG | - | chr5.3:24861393-24861412 | None:intergenic | 40.0% |
| !!! | CATTACTGTTTTGATGGCGA+TGG | + | chr5.3:24861623-24861642 | MS.gene58585:intron | 40.0% |
| !!! | GGATTTTGGATGGTTTTGGA+GGG | + | chr5.3:24860723-24860742 | MS.gene58585:intron | 40.0% |
| !!! | TTTTGATGGCGATGGCTAAA+AGG | + | chr5.3:24861631-24861650 | MS.gene58585:intron | 40.0% |
| AAGCAATGCTATCTGTGGGT+TGG | - | chr5.3:24860312-24860331 | None:intergenic | 45.0% | |
| AATTAGATGCCGCTGTTCGT+TGG | + | chr5.3:24859368-24859387 | MS.gene58585:intron | 45.0% | |
| AATTCAACTCCACTGCAGCA+TGG | + | chr5.3:24860357-24860376 | MS.gene58585:CDS | 45.0% | |
| AGAGGAAGCAATGCTATCTG+TGG | - | chr5.3:24860317-24860336 | None:intergenic | 45.0% | |
| ATTCAACTCCACTGCAGCAT+GGG | + | chr5.3:24860358-24860377 | MS.gene58585:CDS | 45.0% | |
| ATTCCCGGGCTATAACACTT+TGG | + | chr5.3:24862388-24862407 | MS.gene58585:CDS | 45.0% | |
| CAACACCATACCGGATTACA+TGG | + | chr5.3:24859541-24859560 | MS.gene58585:CDS | 45.0% | |
| CACATGTTTGCAGCATAAGC+TGG | - | chr5.3:24861255-24861274 | None:intergenic | 45.0% | |
| CAGCTTATGCTGCAAACATG+TGG | + | chr5.3:24861253-24861272 | MS.gene58585:CDS | 45.0% | |
| CATGCAGTGTTCGAGAATAG+AGG | - | chr5.3:24859805-24859824 | None:intergenic | 45.0% | |
| CGATAGGCCTTCACAATGTT+AGG | + | chr5.3:24862460-24862479 | MS.gene58585:CDS | 45.0% | |
| CGGAAAGTCAACAACATGTG+TGG | + | chr5.3:24862082-24862101 | MS.gene58585:CDS | 45.0% | |
| CTATTCTCGAACACTGCATG+GGG | + | chr5.3:24859805-24859824 | MS.gene58585:CDS | 45.0% | |
| CTCTATTCTCGAACACTGCA+TGG | + | chr5.3:24859803-24859822 | MS.gene58585:CDS | 45.0% | |
| CTGTCATGTCTATGTGGACA+AGG | + | chr5.3:24861223-24861242 | MS.gene58585:CDS | 45.0% | |
| CTTCCATTCTGCCAGATTCT+TGG | + | chr5.3:24862350-24862369 | MS.gene58585:CDS | 45.0% | |
| CTTGAGTTTACTCACCATGG+TGG | + | chr5.3:24858455-24858474 | MS.gene58585:CDS | 45.0% | |
| GAACAGCGGCATCTAATTTC+TGG | - | chr5.3:24859366-24859385 | None:intergenic | 45.0% | |
| GAGGAAGCAATGCTATCTGT+GGG | - | chr5.3:24860316-24860335 | None:intergenic | 45.0% | |
| GATCCTGCAGATGTTCATTC+TGG | + | chr5.3:24859910-24859929 | MS.gene58585:CDS | 45.0% | |
| GATGATTGGGTCTACAGTGA+CGG | + | chr5.3:24862062-24862081 | MS.gene58585:CDS | 45.0% | |
| GTGATGTACGTGTTATGTGC+AGG | + | chr5.3:24861194-24861213 | MS.gene58585:intron | 45.0% | |
| TAGTCCCATGTAATCCGGTA+TGG | - | chr5.3:24859549-24859568 | None:intergenic | 45.0% | |
| TATGTTTGGGAGAGGGATGT+TGG | - | chr5.3:24860908-24860927 | None:intergenic | 45.0% | |
| TCACCAGAATGAACATCTGC+AGG | - | chr5.3:24859916-24859935 | None:intergenic | 45.0% | |
| TCATACAGCAGTCTGCTTGA+AGG | + | chr5.3:24860017-24860036 | MS.gene58585:CDS | 45.0% | |
| TCTCCAAGAATCTGGCAGAA+TGG | - | chr5.3:24862356-24862375 | None:intergenic | 45.0% | |
| TGGGAAGCTGCTCTTAAAGA+TGG | + | chr5.3:24860284-24860303 | MS.gene58585:CDS | 45.0% | |
| TGTACAGGTAAAGCAGCATG+GGG | + | chr5.3:24859717-24859736 | MS.gene58585:intron | 45.0% | |
| TGTGAAGGCCTATCGTAAGT+TGG | - | chr5.3:24862455-24862474 | None:intergenic | 45.0% | |
| TTCCCACGAATCAAGCTTCA+AGG | - | chr5.3:24859595-24859614 | None:intergenic | 45.0% | |
| ! | AGGGGGATTTTGGATGGTTT+TGG | + | chr5.3:24860719-24860738 | MS.gene58585:intron | 45.0% |
| ! | CCTATCGTAAGTTGGAGGAA+GGG | - | chr5.3:24862447-24862466 | None:intergenic | 45.0% |
| ! | GAACCAAAGTGTTATAGCCC+GGG | - | chr5.3:24862394-24862413 | None:intergenic | 45.0% |
| ! | GGAACCAAAGTGTTATAGCC+CGG | - | chr5.3:24862395-24862414 | None:intergenic | 45.0% |
| ! | TACTTGAGACTGAGAAGCGT+GGG | + | chr5.3:24862003-24862022 | MS.gene58585:CDS | 45.0% |
| ! | TCCTTTTCATCCACTTCTCG+CGG | + | chr5.3:24858205-24858224 | MS.gene58585:CDS | 45.0% |
| ! | TCTATTTGGGAGGGGGATTT+TGG | + | chr5.3:24860709-24860728 | MS.gene58585:intron | 45.0% |
| ! | TTTTGGCCGTTTACAGACAG+GGG | + | chr5.3:24859479-24859498 | MS.gene58585:intron | 45.0% |
| !! | GAAGCGTTGAATAAGCGGTT+AGG | + | chr5.3:24861279-24861298 | MS.gene58585:CDS | 45.0% |
| !! | TTACCCCTCTTCTAGTTCCA+CGG | + | chr5.3:24858902-24858921 | MS.gene58585:intron | 45.0% |
| !!! | GGGATTTTGGATGGTTTTGG+AGG | + | chr5.3:24860722-24860741 | MS.gene58585:intron | 45.0% |
| !!! | GTTTTTGGCCGTTTACAGAC+AGG | + | chr5.3:24859477-24859496 | MS.gene58585:intron | 45.0% |
| AAGTGAGCATCAAGAGGTGG+AGG | - | chr5.3:24860467-24860486 | None:intergenic | 50.0% | |
| ACCAAGTGAGCATCAAGAGG+TGG | - | chr5.3:24860470-24860489 | None:intergenic | 50.0% | |
| ACCGCGAGAAGTGGATGAAA+AGG | - | chr5.3:24858209-24858228 | None:intergenic | 50.0% | |
| ACGATCAAAACCGCGAGAAG+TGG | - | chr5.3:24858218-24858237 | None:intergenic | 50.0% | |
| AGCATCAGTGATATCGACCG+TGG | - | chr5.3:24858922-24858941 | None:intergenic | 50.0% | |
| AGCATGTCTGGCAAGCCATA+TGG | + | chr5.3:24860392-24860411 | MS.gene58585:CDS | 50.0% | |
| ATCGACCGTGGAACTAGAAG+AGG | - | chr5.3:24858910-24858929 | None:intergenic | 50.0% | |
| CCCTTCCTCCAACTTACGAT+AGG | + | chr5.3:24862444-24862463 | MS.gene58585:CDS | 50.0% | |
| CGATCGTCTGTCATTGTGCA+GGG | + | chr5.3:24860224-24860243 | MS.gene58585:intron | 50.0% | |
| CTACTTGAGACTGAGAAGCG+TGG | + | chr5.3:24862002-24862021 | MS.gene58585:CDS | 50.0% | |
| GAATAAGCGGTTAGGGACTG+AGG | + | chr5.3:24861287-24861306 | MS.gene58585:CDS | 50.0% | |
| GAGTTTACTCACCATGGTGG+CGG | + | chr5.3:24858458-24858477 | MS.gene58585:CDS | 50.0% | |
| GGATCAATAGTTGCACGCCA+AGG | - | chr5.3:24859895-24859914 | None:intergenic | 50.0% | |
| GTCGAAAATCCGCGGTAGAT+GGG | + | chr5.3:24859948-24859967 | MS.gene58585:CDS | 50.0% | |
| GTGCTTCCCCTGTCTGTAAA+CGG | - | chr5.3:24859488-24859507 | None:intergenic | 50.0% | |
| TCCACCTCTTGATGCTCACT+TGG | + | chr5.3:24860466-24860485 | MS.gene58585:CDS | 50.0% | |
| TCGAAAATCCGCGGTAGATG+GGG | + | chr5.3:24859949-24859968 | MS.gene58585:CDS | 50.0% | |
| TCGACCGTGGAACTAGAAGA+GGG | - | chr5.3:24858909-24858928 | None:intergenic | 50.0% | |
| TCGATCGTCTGTCATTGTGC+AGG | + | chr5.3:24860223-24860242 | MS.gene58585:intron | 50.0% | |
| TCTGTGTTTCTCATGCCAGC+AGG | + | chr5.3:24859742-24859761 | MS.gene58585:CDS | 50.0% | |
| TGGGTAACTGGTGCATTTGC+TGG | + | chr5.3:24859994-24860013 | MS.gene58585:CDS | 50.0% | |
| TGTCGAAAATCCGCGGTAGA+TGG | + | chr5.3:24859947-24859966 | MS.gene58585:CDS | 50.0% | |
| TTGGCTGTGTCGAAAATCCG+CGG | + | chr5.3:24859940-24859959 | MS.gene58585:CDS | 50.0% | |
| TTTGGGAGAGGGATGTTGGA+GGG | - | chr5.3:24860904-24860923 | None:intergenic | 50.0% | |
| ! | GAAGGCCTATCGTAAGTTGG+AGG | - | chr5.3:24862452-24862471 | None:intergenic | 50.0% |
| ! | GCCTATCGTAAGTTGGAGGA+AGG | - | chr5.3:24862448-24862467 | None:intergenic | 50.0% |
| ! | TCGTAAGTTGGAGGAAGGGA+AGG | - | chr5.3:24862443-24862462 | None:intergenic | 50.0% |
| ! | TTGAGAAGCGCATTCAGCCT+TGG | + | chr5.3:24859875-24859894 | MS.gene58585:CDS | 50.0% |
| ! | TTTGGGAGGGGGATTTTGGA+TGG | + | chr5.3:24860713-24860732 | MS.gene58585:intron | 50.0% |
| !! | TGGTGCCGTTCTCTATCTCA+AGG | + | chr5.3:24858499-24858518 | MS.gene58585:CDS | 50.0% |
| AAAATCCGCGGTAGATGGGG+AGG | + | chr5.3:24859952-24859971 | MS.gene58585:CDS | 55.0% | |
| AGTGTACCCAGCATTCCTGC+TGG | - | chr5.3:24859760-24859779 | None:intergenic | 55.0% | |
| CAAAACCTCCCCATCTACCG+CGG | - | chr5.3:24859960-24859979 | None:intergenic | 55.0% | |
| CGACCGTGGAACTAGAAGAG+GGG | - | chr5.3:24858908-24858927 | None:intergenic | 55.0% | |
| CTCATGCCAGCAGGAATGCT+GGG | + | chr5.3:24859751-24859770 | MS.gene58585:CDS | 55.0% | |
| GCACGCAACTCTGGATGTAG+AGG | - | chr5.3:24860335-24860354 | None:intergenic | 55.0% | |
| GCTTCCCACCATTCATGCCA+TGG | - | chr5.3:24860272-24860291 | None:intergenic | 55.0% | |
| GTTTGGGAGAGGGATGTTGG+AGG | - | chr5.3:24860905-24860924 | None:intergenic | 55.0% | |
| TCTCATGCCAGCAGGAATGC+TGG | + | chr5.3:24859750-24859769 | MS.gene58585:CDS | 55.0% | |
| TTGGGAGAGGGATGTTGGAG+GGG | - | chr5.3:24860903-24860922 | None:intergenic | 55.0% | |
| ! | TGGCGGTGGTGATTCTGGTT+TGG | + | chr5.3:24858475-24858494 | MS.gene58585:CDS | 55.0% |
| !! | GGCGGTGGTGATTCTGGTTT+GGG | + | chr5.3:24858476-24858495 | MS.gene58585:CDS | 55.0% |
| !! | GGTGGTGATTCTGGTTTGGG+TGG | + | chr5.3:24858479-24858498 | MS.gene58585:CDS | 55.0% |
| !! | TTTACTCACCATGGTGGCGG+TGG | + | chr5.3:24858461-24858480 | MS.gene58585:CDS | 55.0% |
| AGAGGGATGTTGGAGGGGAG+GGG | - | chr5.3:24860898-24860917 | None:intergenic | 60.0% | |
| AGCACACAGCTGGACCTGCA+TGG | + | chr5.3:24859503-24859522 | MS.gene58585:CDS | 60.0% | |
| CAGAATCACCACCGCCACCA+TGG | - | chr5.3:24858472-24858491 | None:intergenic | 60.0% | |
| CGCATACTCCCATGCTGCAG+TGG | - | chr5.3:24860369-24860388 | None:intergenic | 60.0% | |
| GAGAGGGATGTTGGAGGGGA+GGG | - | chr5.3:24860899-24860918 | None:intergenic | 60.0% | |
| GAGTATGCGCGGAGCATGTC+TGG | + | chr5.3:24860380-24860399 | MS.gene58585:CDS | 60.0% | |
| ! | AGACAGGGGAAGCACACAGC+TGG | + | chr5.3:24859493-24859512 | MS.gene58585:intron | 60.0% |
| ! | CTGCAGCATGGGAGTATGCG+CGG | + | chr5.3:24860369-24860388 | MS.gene58585:CDS | 60.0% |
| !! | CATGGTGGCGGTGGTGATTC+TGG | + | chr5.3:24858470-24858489 | MS.gene58585:CDS | 60.0% |
| GATGTTGGAGGGGAGGGGAG+GGG | - | chr5.3:24860893-24860912 | None:intergenic | 65.0% | |
| GGAGAGGGATGTTGGAGGGG+AGG | - | chr5.3:24860900-24860919 | None:intergenic | 65.0% | |
| GGATGTTGGAGGGGAGGGGA+GGG | - | chr5.3:24860894-24860913 | None:intergenic | 65.0% | |
| GTGGGAAGAGCCAGCAGAGC+TGG | + | chr5.3:24859608-24859627 | MS.gene58585:CDS | 65.0% | |
| GGGATGTTGGAGGGGAGGGG+AGG | - | chr5.3:24860895-24860914 | None:intergenic | 70.0% | |
| TTGGAGGGGAGGGGAGGGGA+GGG | - | chr5.3:24860889-24860908 | None:intergenic | 70.0% | |
| GTTGGAGGGGAGGGGAGGGG+AGG | - | chr5.3:24860890-24860909 | None:intergenic | 75.0% | |
| TGGAGGGGAGGGGAGGGGAG+GGG | - | chr5.3:24860888-24860907 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 24858200 | 24862481 | 24858200 | ID=MS.gene58585 |
| chr5.3 | mRNA | 24858200 | 24862481 | 24858200 | ID=MS.gene58585.t1;Parent=MS.gene58585 |
| chr5.3 | exon | 24858200 | 24858520 | 24858200 | ID=MS.gene58585.t1.exon1;Parent=MS.gene58585.t1 |
| chr5.3 | CDS | 24858200 | 24858520 | 24858200 | ID=cds.MS.gene58585.t1;Parent=MS.gene58585.t1 |
| chr5.3 | exon | 24859495 | 24859635 | 24859495 | ID=MS.gene58585.t1.exon2;Parent=MS.gene58585.t1 |
| chr5.3 | CDS | 24859495 | 24859635 | 24859495 | ID=cds.MS.gene58585.t1;Parent=MS.gene58585.t1 |
| chr5.3 | exon | 24859724 | 24860089 | 24859724 | ID=MS.gene58585.t1.exon3;Parent=MS.gene58585.t1 |
| chr5.3 | CDS | 24859724 | 24860089 | 24859724 | ID=cds.MS.gene58585.t1;Parent=MS.gene58585.t1 |
| chr5.3 | exon | 24860245 | 24860487 | 24860245 | ID=MS.gene58585.t1.exon4;Parent=MS.gene58585.t1 |
| chr5.3 | CDS | 24860245 | 24860487 | 24860245 | ID=cds.MS.gene58585.t1;Parent=MS.gene58585.t1 |
| chr5.3 | exon | 24861216 | 24861308 | 24861216 | ID=MS.gene58585.t1.exon5;Parent=MS.gene58585.t1 |
| chr5.3 | CDS | 24861216 | 24861308 | 24861216 | ID=cds.MS.gene58585.t1;Parent=MS.gene58585.t1 |
| chr5.3 | exon | 24861981 | 24862181 | 24861981 | ID=MS.gene58585.t1.exon6;Parent=MS.gene58585.t1 |
| chr5.3 | CDS | 24861981 | 24862181 | 24861981 | ID=cds.MS.gene58585.t1;Parent=MS.gene58585.t1 |
| chr5.3 | exon | 24862269 | 24862481 | 24862269 | ID=MS.gene58585.t1.exon7;Parent=MS.gene58585.t1 |
| chr5.3 | CDS | 24862269 | 24862481 | 24862269 | ID=cds.MS.gene58585.t1;Parent=MS.gene58585.t1 |
| Gene Sequence |
| Protein sequence |
