Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030445.t1 | XP_013446995.1 | 98.3 | 534 | 9 | 0 | 1 | 534 | 1 | 534 | 2.00E-285 | 991.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030445.t1 | Q9FMV3 | 69.1 | 501 | 140 | 5 | 36 | 531 | 49 | 539 | 3.2e-183 | 642.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030445.t1 | A0A072TUB8 | 98.3 | 534 | 9 | 0 | 1 | 534 | 1 | 534 | 1.4e-285 | 991.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene030445 | MS.gene013153 | PPI |
MS.gene030445 | MS.gene000935 | PPI |
MS.gene030445 | MS.gene06229 | PPI |
MS.gene030445 | MS.gene055505 | PPI |
MS.gene030445 | MS.gene72190 | PPI |
MS.gene071383 | MS.gene030445 | PPI |
MS.gene72190 | MS.gene030445 | PPI |
MS.gene06229 | MS.gene030445 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030445.t1 | MTR_8g096850 | 98.315 | 534 | 9 | 0 | 1 | 534 | 1 | 534 | 0.0 | 1083 |
MS.gene030445.t1 | MTR_3g099100 | 77.101 | 476 | 103 | 2 | 37 | 511 | 36 | 506 | 0.0 | 731 |
MS.gene030445.t1 | MTR_8g094780 | 55.242 | 496 | 211 | 7 | 38 | 531 | 45 | 531 | 0.0 | 532 |
MS.gene030445.t1 | MTR_3g097010 | 50.980 | 510 | 230 | 9 | 25 | 531 | 23 | 515 | 3.37e-179 | 514 |
MS.gene030445.t1 | MTR_3g097010 | 50.320 | 469 | 215 | 8 | 66 | 531 | 1 | 454 | 2.35e-161 | 467 |
MS.gene030445.t1 | MTR_3g097010 | 47.843 | 510 | 208 | 10 | 25 | 531 | 23 | 477 | 2.91e-161 | 467 |
MS.gene030445.t1 | MTR_8g044820 | 69.811 | 53 | 16 | 0 | 38 | 90 | 47 | 99 | 1.99e-16 | 75.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030445.t1 | AT5G50640 | 63.447 | 528 | 168 | 5 | 2 | 513 | 8 | 526 | 0.0 | 668 |
MS.gene030445.t1 | AT5G50530 | 63.447 | 528 | 168 | 5 | 2 | 513 | 8 | 526 | 0.0 | 668 |
MS.gene030445.t1 | AT5G63490 | 66.667 | 501 | 152 | 5 | 36 | 531 | 49 | 539 | 0.0 | 638 |
MS.gene030445.t1 | AT5G63490 | 66.667 | 501 | 152 | 5 | 36 | 531 | 49 | 539 | 0.0 | 638 |
MS.gene030445.t1 | AT3G52950 | 58.568 | 461 | 178 | 7 | 38 | 494 | 60 | 511 | 0.0 | 533 |
MS.gene030445.t1 | AT3G52950 | 58.568 | 461 | 178 | 7 | 38 | 494 | 60 | 511 | 0.0 | 533 |
MS.gene030445.t1 | AT2G36500 | 53.846 | 507 | 212 | 10 | 27 | 531 | 46 | 532 | 0.0 | 521 |
Find 128 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAAATGTGGGGCAGGTTAT+TGG | 0.182786 | 4.4:+6698098 | None:intergenic |
GCTGCAATTGTTGCTGCTTT+AGG | 0.218996 | 4.4:-6697375 | MS.gene030445:CDS |
CAATAACCTGCCCCACATTT+TGG | 0.219976 | 4.4:-6698097 | MS.gene030445:intron |
TCATAGACCGTTGTTGTTTC+GGG | 0.238447 | 4.4:+6701441 | None:intergenic |
ACTCCATGATACAAAAGTTT+TGG | 0.250286 | 4.4:-6698637 | MS.gene030445:CDS |
GTATCGATTATTGCACATTC+TGG | 0.251129 | 4.4:+6699810 | None:intergenic |
TTCATAGACCGTTGTTGTTT+CGG | 0.251846 | 4.4:+6701440 | None:intergenic |
ACCAACCTTGCACCATCTTT+TGG | 0.267823 | 4.4:+6701093 | None:intergenic |
AAAATGTGGGGCAGGTTATT+GGG | 0.285380 | 4.4:+6698099 | None:intergenic |
TAGGTCTATTAGCGTTCTTC+AGG | 0.332964 | 4.4:-6697356 | MS.gene030445:CDS |
CATCATTCATTGAGACTCTT+CGG | 0.336729 | 4.4:-6700651 | MS.gene030445:CDS |
CTTCTTATCTTGTAGTTTGA+AGG | 0.341783 | 4.4:+6698396 | None:intergenic |
ATTTCCGAGGGAGGAGAAAC+AGG | 0.343924 | 4.4:-6698463 | MS.gene030445:CDS |
TGCACGCTTGACGCATTATA+AGG | 0.354189 | 4.4:+6698430 | None:intergenic |
AGTCTCAATGAATGATGAAT+TGG | 0.361576 | 4.4:+6700657 | None:intergenic |
AACAGAAGCAAGTTTAGGTT+TGG | 0.362547 | 4.4:-6697451 | MS.gene030445:CDS |
AGGGAAATTCAGACATTTAC+CGG | 0.365121 | 4.4:-6700966 | MS.gene030445:CDS |
ATTACCTACTTTGAATTCTC+AGG | 0.404211 | 4.4:+6700592 | None:intergenic |
TGCTGTGGCCACAGCTAGTC+AGG | 0.408354 | 4.4:-6699601 | MS.gene030445:intron |
GCGCTTCACATAATGCATAA+TGG | 0.412585 | 4.4:-6699774 | MS.gene030445:CDS |
ATTCAGACATTTACCGGTAG+TGG | 0.414318 | 4.4:-6700960 | MS.gene030445:CDS |
CATCTTCCTGTGGTTGATAG+AGG | 0.414498 | 4.4:-6699741 | MS.gene030445:intron |
TACGGAACAGAAGCAAGTTT+AGG | 0.417935 | 4.4:-6697456 | MS.gene030445:CDS |
CTTCAAACTACAAGATAAGA+AGG | 0.424338 | 4.4:-6698395 | MS.gene030445:CDS |
GTGTCGGTAAGGACGAATAC+TGG | 0.424729 | 4.4:+6701134 | None:intergenic |
CACTGGGGAGCATCTGCCTC+TGG | 0.434693 | 4.4:-6700815 | MS.gene030445:intron |
GAAGAGAATGTACGTGGTGG+TGG | 0.446340 | 4.4:+6702478 | None:intergenic |
AGAACACGATCAAGTTGTAT+TGG | 0.448245 | 4.4:-6697976 | MS.gene030445:CDS |
ATCATTCATTGAGACTCTTC+GGG | 0.450767 | 4.4:-6700650 | MS.gene030445:CDS |
ATATGATGCCATTGCTCGTA+TGG | 0.459385 | 4.4:-6700894 | MS.gene030445:CDS |
GCCTATCATACCGTTGCAGC+TGG | 0.459706 | 4.4:-6697399 | MS.gene030445:CDS |
ATATGCTGAGTCAGAAGCTT+GGG | 0.462080 | 4.4:-6697427 | MS.gene030445:CDS |
TCCAGCTGCAACGGTATGAT+AGG | 0.464208 | 4.4:+6697398 | None:intergenic |
TTCTTCGTCATTTGAAGTCA+AGG | 0.465007 | 4.4:+6698601 | None:intergenic |
TGCAAAGACGGCTGGTTTGA+AGG | 0.470321 | 4.4:-6697919 | MS.gene030445:intron |
TCTTCTTCCTTGAGCGAGTA+GGG | 0.493254 | 4.4:+6702546 | None:intergenic |
AACTTCAGATACTCGGAGCT+TGG | 0.494194 | 4.4:-6698169 | MS.gene030445:intron |
ATCGCCAACTCTCTGAATGA+TGG | 0.494800 | 4.4:+6698131 | None:intergenic |
CTATGAAGCTTGTCGTCGAA+TGG | 0.496303 | 4.4:-6701424 | MS.gene030445:CDS |
GCAATTGCAGCAGCTGTTGA+AGG | 0.501331 | 4.4:-6700848 | MS.gene030445:CDS |
TCTCCCTGTTTCTCCTCCCT+CGG | 0.503845 | 4.4:+6698459 | None:intergenic |
ACTTCCATCATTCAGAGAGT+TGG | 0.506822 | 4.4:-6698135 | MS.gene030445:CDS |
CATTTACCGGTAGTGGAAAA+CGG | 0.507176 | 4.4:-6700953 | MS.gene030445:CDS |
CGCCCTTTCCATACGAGCAA+TGG | 0.512206 | 4.4:+6700886 | None:intergenic |
ATGTGAAGCGCATCAACAAT+TGG | 0.513552 | 4.4:+6699786 | None:intergenic |
GTGGGGCGCATAGGATGAAA+TGG | 0.513937 | 4.4:+6702497 | None:intergenic |
TTCAAAGGATATCTTGATGC+GGG | 0.515248 | 4.4:-6699981 | MS.gene030445:CDS |
GAAATCACTGCGACTTTCAA+AGG | 0.517175 | 4.4:-6701475 | MS.gene030445:CDS |
TACTCAGGAACACGTGGTTA+CGG | 0.517956 | 4.4:-6697474 | MS.gene030445:CDS |
ATCATACCAAAATGTGGGGC+AGG | 0.520469 | 4.4:+6698091 | None:intergenic |
ATGGAAAGGGCGGCTGAGAA+AGG | 0.521302 | 4.4:-6700875 | MS.gene030445:CDS |
TGGATTCCTTGTCATAACCT+TGG | 0.527593 | 4.4:+6701154 | None:intergenic |
TTGAAGGTATCGACAAACAC+TGG | 0.527694 | 4.4:-6700832 | MS.gene030445:CDS |
TGAGTCAGAAGCTTGGGCCT+CGG | 0.530803 | 4.4:-6697421 | MS.gene030445:CDS |
CGCATAGGATGAAATGGTCT+AGG | 0.531448 | 4.4:+6702503 | None:intergenic |
TCTTGAATCATACCAAAATG+TGG | 0.534435 | 4.4:+6698085 | None:intergenic |
TGCCATTGCTCGTATGGAAA+GGG | 0.534986 | 4.4:-6700888 | MS.gene030445:CDS |
GTGGACCATGCAAAGACGGC+TGG | 0.535070 | 4.4:-6697927 | MS.gene030445:CDS |
AGATACTCGGAGCTTGGCAG+AGG | 0.539192 | 4.4:-6698163 | MS.gene030445:CDS |
TGCAAAATGTCTCGAAAGAG+TGG | 0.540163 | 4.4:-6702584 | None:intergenic |
CTTGAATCATACCAAAATGT+GGG | 0.543101 | 4.4:+6698086 | None:intergenic |
ATCTTCAACTCTTGTTGAGA+CGG | 0.545684 | 4.4:-6699936 | MS.gene030445:intron |
ATGCCATTGCTCGTATGGAA+AGG | 0.548086 | 4.4:-6700889 | MS.gene030445:CDS |
AAGAGAATGTACGTGGTGGT+GGG | 0.552945 | 4.4:+6702479 | None:intergenic |
TTATTGCAACTTCAGATACT+CGG | 0.553093 | 4.4:-6698176 | MS.gene030445:intron |
TTCCTTGAAAATGATTTCCG+AGG | 0.553756 | 4.4:-6698476 | MS.gene030445:CDS |
GTCTTCTTCCTTGAGCGAGT+AGG | 0.554885 | 4.4:+6702545 | None:intergenic |
AGCCGTCTTTGCATGGTCCA+CGG | 0.555075 | 4.4:+6697929 | None:intergenic |
GATTCCACAGAGCAAAGCAT+TGG | 0.556200 | 4.4:+6701365 | None:intergenic |
GCATACATATTTCAGTTCAA+AGG | 0.556886 | 4.4:-6699996 | MS.gene030445:intron |
TCAAACCAGCCGTCTTTGCA+TGG | 0.559620 | 4.4:+6697922 | None:intergenic |
TGAAGACACCCCTTGTTCCA+AGG | 0.560839 | 4.4:-6701171 | MS.gene030445:CDS |
GATTCCAATGCTTTGCTCTG+TGG | 0.561199 | 4.4:-6701369 | MS.gene030445:CDS |
TGCAACGGTATGATAGGCCG+AGG | 0.561292 | 4.4:+6697404 | None:intergenic |
TGAATTCTCAGGAATGATTG+TGG | 0.562019 | 4.4:+6700603 | None:intergenic |
AAATGTGGGGCAGGTTATTG+GGG | 0.564202 | 4.4:+6698100 | None:intergenic |
GGATGAAATGGTCTAGGAGG+AGG | 0.564953 | 4.4:+6702509 | None:intergenic |
TGAAGGTATCGACAAACACT+GGG | 0.564993 | 4.4:-6700831 | MS.gene030445:CDS |
TACGTGGTGGTGGGGCGCAT+AGG | 0.569019 | 4.4:+6702488 | None:intergenic |
CAACAGCAAGAGTGTCGGTA+AGG | 0.571475 | 4.4:+6701123 | None:intergenic |
GCTTGACGCATTATAAGGAA+TGG | 0.572553 | 4.4:+6698435 | None:intergenic |
TCCTTGAAAATGATTTCCGA+GGG | 0.576217 | 4.4:-6698475 | MS.gene030445:CDS |
AATTGCAGCTCCAGCTGCAA+CGG | 0.581006 | 4.4:+6697389 | None:intergenic |
AGCCGTGGACCATGCAAAGA+CGG | 0.581286 | 4.4:-6697931 | MS.gene030445:CDS |
AAAATTCTTGCATCTTCCTG+TGG | 0.582586 | 4.4:-6699751 | MS.gene030445:CDS |
TTGAAAATGATTTCCGAGGG+AGG | 0.583648 | 4.4:-6698472 | MS.gene030445:CDS |
AATATGCTGAGTCAGAAGCT+TGG | 0.584912 | 4.4:-6697428 | MS.gene030445:CDS |
TAATATCACTCATGCTGCTG+TGG | 0.585105 | 4.4:-6699616 | MS.gene030445:CDS |
AGAGAATGTACGTGGTGGTG+GGG | 0.585727 | 4.4:+6702480 | None:intergenic |
TTGTCATAACCTTGGAACAA+GGG | 0.586424 | 4.4:+6701162 | None:intergenic |
AGATTGCACTTAGACTACTC+AGG | 0.587629 | 4.4:-6697489 | MS.gene030445:CDS |
GTCATTTGAAGTCAAGGCCA+TGG | 0.588808 | 4.4:+6698607 | None:intergenic |
CTTGTCATAACCTTGGAACA+AGG | 0.590488 | 4.4:+6701161 | None:intergenic |
TAGTGATCTCGCTGCAGCCG+TGG | 0.596686 | 4.4:-6697946 | MS.gene030445:CDS |
CAACTAGCCCTACTCGCTCA+AGG | 0.597128 | 4.4:-6702553 | MS.gene030445:CDS |
TGCAAGTGCTGCTATTGTGA+CGG | 0.597619 | 4.4:-6700407 | MS.gene030445:CDS |
TTGTAGTTTGAAGGAAAATG+TGG | 0.597790 | 4.4:+6698405 | None:intergenic |
GTTGTCAAAACTGTATCTGT+TGG | 0.601039 | 4.4:+6700454 | None:intergenic |
ATATTACCTCTATCAACCAC+AGG | 0.601445 | 4.4:+6699735 | None:intergenic |
CTGTGGAATCCTCACAGACA+AGG | 0.604230 | 4.4:-6701352 | MS.gene030445:intron |
CAAGTTATACCTTGTCTGTG+AGG | 0.605040 | 4.4:+6701343 | None:intergenic |
TTTCCGAGGGAGGAGAAACA+GGG | 0.613349 | 4.4:-6698462 | MS.gene030445:CDS |
GCACTCCAAAAGATGGTGCA+AGG | 0.613444 | 4.4:-6701098 | MS.gene030445:intron |
ATAAACACTTGGCTATGTCA+AGG | 0.616888 | 4.4:+6700915 | None:intergenic |
TGTTGAAGCACTCCAAAAGA+TGG | 0.621416 | 4.4:-6701105 | MS.gene030445:CDS |
ACCACATACCTGACTAGCTG+TGG | 0.622500 | 4.4:+6699593 | None:intergenic |
TGCTTCAACAGCAAGAGTGT+CGG | 0.623821 | 4.4:+6701118 | None:intergenic |
TGTCATAACCTTGGAACAAG+GGG | 0.627176 | 4.4:+6701163 | None:intergenic |
GACTGTGCCCGAAACAACAA+CGG | 0.627509 | 4.4:-6701448 | MS.gene030445:CDS |
CTTGTTCCAAGGTTATGACA+AGG | 0.630832 | 4.4:-6701160 | MS.gene030445:CDS |
TTCAAACTACAAGATAAGAA+GGG | 0.633262 | 4.4:-6698394 | MS.gene030445:CDS |
GGTAGTGGAAAACGGAGAAG+TGG | 0.637417 | 4.4:-6700945 | MS.gene030445:CDS |
AATGGCATCATATAAACACT+TGG | 0.642839 | 4.4:+6700904 | None:intergenic |
CTCAACAAGAGTTGAAGATG+CGG | 0.646697 | 4.4:+6699940 | None:intergenic |
AGATGGCATTGTTGTTGCCA+CGG | 0.647116 | 4.4:-6699649 | MS.gene030445:CDS |
CATTGCTCGTATGGAAAGGG+CGG | 0.647683 | 4.4:-6700885 | MS.gene030445:CDS |
GTTCAAAGGATATCTTGATG+CGG | 0.648918 | 4.4:-6699982 | MS.gene030445:CDS |
ATAGGATGAAATGGTCTAGG+AGG | 0.655436 | 4.4:+6702506 | None:intergenic |
TTGAATCATACCAAAATGTG+GGG | 0.658177 | 4.4:+6698087 | None:intergenic |
GATATTAATCACATCAACCG+TGG | 0.685232 | 4.4:+6699632 | None:intergenic |
AAGGGCGGCTGAGAAAGGAA+AGG | 0.690082 | 4.4:-6700870 | MS.gene030445:CDS |
ACGAAGAAGAAGATTCACAA+AGG | 0.692407 | 4.4:-6698586 | MS.gene030445:intron |
TTAGACTACTCAGGAACACG+TGG | 0.696933 | 4.4:-6697480 | MS.gene030445:CDS |
GGAATGATTGTGGACAACGA+TGG | 0.709258 | 4.4:+6700613 | None:intergenic |
AGATTACATAGATTCACATG+TGG | 0.725577 | 4.4:-6698370 | MS.gene030445:intron |
ACTTACGTAAGGATACCACA+AGG | 0.768864 | 4.4:+6700373 | None:intergenic |
ACGGTTGATGACAAACCTTG+TGG | 0.796530 | 4.4:-6700388 | MS.gene030445:CDS |
GAAGGTATCGACAAACACTG+GGG | 0.800180 | 4.4:-6700830 | MS.gene030445:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CTTTTTAAAATAAATATAGT+TGG | - | chr4.4:6697946-6697965 | MS.gene030445:CDS | 10.0% |
!! | ATAATCTATACATAAATGAA+AGG | + | chr4.4:6697593-6697612 | None:intergenic | 15.0% |
!! | ATAATTAATGAGAAAAATCA+CGG | - | chr4.4:6697780-6697799 | MS.gene030445:intron | 15.0% |
!! | TATTTAAGTACTAGAAAATA+AGG | + | chr4.4:6700863-6700882 | None:intergenic | 15.0% |
!! | TCCAATTTAATTAAACAAAA+AGG | - | chr4.4:6702244-6702263 | MS.gene030445:intron | 15.0% |
!!! | AAATTTGTAGAGTAAATTTT+TGG | - | chr4.4:6699749-6699768 | MS.gene030445:CDS | 15.0% |
!!! | ATCTAAATCTAGTTTTATTT+GGG | - | chr4.4:6700012-6700031 | MS.gene030445:intron | 15.0% |
!!! | GTTCTATTAATTTGAATAAT+TGG | - | chr4.4:6698035-6698054 | MS.gene030445:intron | 15.0% |
!!! | TAAATGAGATTTATTTTTGT+GGG | - | chr4.4:6702054-6702073 | MS.gene030445:intron | 15.0% |
!!! | TATCTAAATCTAGTTTTATT+TGG | - | chr4.4:6700011-6700030 | MS.gene030445:intron | 15.0% |
!!! | TCCTTTTTGTTTAATTAAAT+TGG | + | chr4.4:6702248-6702267 | None:intergenic | 15.0% |
!!! | TTAAATGAGATTTATTTTTG+TGG | - | chr4.4:6702053-6702072 | MS.gene030445:intron | 15.0% |
!!! | TTTAGCTTAAACAAAAAAAA+AGG | + | chr4.4:6699357-6699376 | None:intergenic | 15.0% |
!! | AACTCAAGTTTATGTTTAAT+TGG | - | chr4.4:6699662-6699681 | MS.gene030445:intron | 20.0% |
!! | AACTTAACATGAAACAAAAT+TGG | + | chr4.4:6699230-6699249 | None:intergenic | 20.0% |
!! | AATCAGAAAAATATCAATGA+AGG | + | chr4.4:6700238-6700257 | None:intergenic | 20.0% |
!! | ACATAAATGTAATCTATGAA+TGG | + | chr4.4:6701608-6701627 | None:intergenic | 20.0% |
!! | ACATTTCGAAAAGAAAAAAA+AGG | + | chr4.4:6699601-6699620 | None:intergenic | 20.0% |
!! | ATGTGATTGCAATATAAAAA+TGG | - | chr4.4:6702152-6702171 | MS.gene030445:intron | 20.0% |
!! | CTTATAAACCTAAAAAATCA+AGG | - | chr4.4:6700723-6700742 | MS.gene030445:intron | 20.0% |
!! | GAAAAGAAAAAAAAGGAAAT+GGG | + | chr4.4:6699594-6699613 | None:intergenic | 20.0% |
!! | TAAGTTTACAATTATTTCGA+CGG | + | chr4.4:6700383-6700402 | None:intergenic | 20.0% |
!! | TCTTAATATGTATGCAATTA+AGG | - | chr4.4:6700488-6700507 | MS.gene030445:intron | 20.0% |
!! | TTAATTGGAGTATATATTTC+TGG | - | chr4.4:6699677-6699696 | MS.gene030445:intron | 20.0% |
!! | TTATTACTTGTTTAACAAGA+AGG | - | chr4.4:6698611-6698630 | MS.gene030445:CDS | 20.0% |
!!! | AAATAAATCTCATTTAAGAC+TGG | + | chr4.4:6702050-6702069 | None:intergenic | 20.0% |
!!! | AAATGAGATTTATTTTTGTG+GGG | - | chr4.4:6702055-6702074 | MS.gene030445:intron | 20.0% |
!!! | AATTTTGTTTCATGTTAAGT+TGG | - | chr4.4:6699229-6699248 | MS.gene030445:intron | 20.0% |
!!! | ATCATTTTTCTCCATTAATT+AGG | - | chr4.4:6701226-6701245 | MS.gene030445:intron | 20.0% |
!!! | ATTCATTACTTGATTTTAAG+AGG | - | chr4.4:6697516-6697535 | MS.gene030445:intron | 20.0% |
!!! | ATTTTCTACCTATTGAAAAT+CGG | + | chr4.4:6700979-6700998 | None:intergenic | 20.0% |
!!! | CATTGATATTTTTCTGATTT+TGG | - | chr4.4:6700239-6700258 | MS.gene030445:intron | 20.0% |
!!! | TAATATTTTCTTCCTATCTT+AGG | + | chr4.4:6701042-6701061 | None:intergenic | 20.0% |
!!! | TCAAGATTTTTTTGTTCAAT+AGG | - | chr4.4:6697808-6697827 | MS.gene030445:intron | 20.0% |
!!! | TGAGATTTAAAAGATCTTTT+AGG | - | chr4.4:6700944-6700963 | MS.gene030445:CDS | 20.0% |
!!! | TTAATGTCATTAAGTATTGT+GGG | - | chr4.4:6699879-6699898 | MS.gene030445:intron | 20.0% |
!!! | TTAATTTGAATAATTGGATG+AGG | - | chr4.4:6698041-6698060 | MS.gene030445:intron | 20.0% |
!!! | TTACTCTCTTATTTCTAATT+AGG | - | chr4.4:6699158-6699177 | MS.gene030445:intron | 20.0% |
!!! | TTCATTACTTGATTTTAAGA+GGG | - | chr4.4:6697517-6697536 | MS.gene030445:intron | 20.0% |
!!! | TTTAATGTCATTAAGTATTG+TGG | - | chr4.4:6699878-6699897 | MS.gene030445:intron | 20.0% |
!!! | TTTTCAATAGGTAGAAAATT+TGG | - | chr4.4:6700980-6700999 | MS.gene030445:intron | 20.0% |
!!! | TTTTCTAGTACTTAAATAAC+TGG | - | chr4.4:6700865-6700884 | MS.gene030445:CDS | 20.0% |
!!! | TTTTGATGTTTTTCTTTATC+CGG | + | chr4.4:6698014-6698033 | None:intergenic | 20.0% |
! | AAACAAATATCTGTACCAAT+TGG | - | chr4.4:6697881-6697900 | MS.gene030445:intron | 25.0% |
! | AAGCACTTACACATTATTAA+TGG | - | chr4.4:6701408-6701427 | MS.gene030445:CDS | 25.0% |
! | AAGTTAATTATGCATGTAGA+AGG | - | chr4.4:6698126-6698145 | MS.gene030445:CDS | 25.0% |
! | AAGTTCATCTCAATTAACTT+CGG | + | chr4.4:6699427-6699446 | None:intergenic | 25.0% |
! | ACATCAATTAAGTATTCTTC+TGG | + | chr4.4:6698100-6698119 | None:intergenic | 25.0% |
! | ACCGAAAGTAATTATATTCT+AGG | - | chr4.4:6697839-6697858 | MS.gene030445:intron | 25.0% |
! | ATATAAAGCAAAAGCCTAAA+TGG | - | chr4.4:6698264-6698283 | MS.gene030445:intron | 25.0% |
! | ATCCTTTAACCACAAAAAAT+AGG | + | chr4.4:6698696-6698715 | None:intergenic | 25.0% |
! | ATGTGAGATCAGTAATTATA+AGG | + | chr4.4:6697477-6697496 | None:intergenic | 25.0% |
! | CAAGAAGGAAAAATATAGAA+AGG | - | chr4.4:6698626-6698645 | MS.gene030445:CDS | 25.0% |
! | CATCAATTAAGTATTCTTCT+GGG | + | chr4.4:6698099-6698118 | None:intergenic | 25.0% |
! | CGAAAAGAAAAAAAAGGAAA+TGG | + | chr4.4:6699595-6699614 | None:intergenic | 25.0% |
! | CTAAAACCAATTAACAAAAG+TGG | + | chr4.4:6701157-6701176 | None:intergenic | 25.0% |
! | GATTATTCACTTTGTAGTTA+TGG | + | chr4.4:6697700-6697719 | None:intergenic | 25.0% |
! | GCCTAGAATATAATTACTTT+CGG | + | chr4.4:6697843-6697862 | None:intergenic | 25.0% |
! | GGATAAAGAAAAACATCAAA+AGG | - | chr4.4:6698013-6698032 | MS.gene030445:intron | 25.0% |
! | TAGAATATAATTACTTTCGG+TGG | + | chr4.4:6697840-6697859 | None:intergenic | 25.0% |
! | TCAAGAATATTCAACCATTT+AGG | + | chr4.4:6698281-6698300 | None:intergenic | 25.0% |
! | TGAATATACGTCAGATAAAA+GGG | + | chr4.4:6700064-6700083 | None:intergenic | 25.0% |
! | TGAATATTCTTGAATCTGTT+AGG | - | chr4.4:6698288-6698307 | MS.gene030445:intron | 25.0% |
! | TGTGAGATCAGTAATTATAA+GGG | + | chr4.4:6697476-6697495 | None:intergenic | 25.0% |
! | TTCAAACTACAAGATAAGAA+GGG | - | chr4.4:6701528-6701547 | MS.gene030445:intron | 25.0% |
! | TTGAATATACGTCAGATAAA+AGG | + | chr4.4:6700065-6700084 | None:intergenic | 25.0% |
! | TTGGGAAAAAACTTATTGAA+CGG | + | chr4.4:6700779-6700798 | None:intergenic | 25.0% |
!! | AATTATATTCTAGGCCTTTT+GGG | - | chr4.4:6697848-6697867 | MS.gene030445:intron | 25.0% |
!! | ATAAACTTGAGTTTTCAATG+TGG | + | chr4.4:6699655-6699674 | None:intergenic | 25.0% |
!! | ATGAAATAGTTTTCACTAAC+AGG | - | chr4.4:6701077-6701096 | MS.gene030445:intron | 25.0% |
!! | TAAACTTGAGTTTTCAATGT+GGG | + | chr4.4:6699654-6699673 | None:intergenic | 25.0% |
!! | TAATTATATTCTAGGCCTTT+TGG | - | chr4.4:6697847-6697866 | MS.gene030445:intron | 25.0% |
!! | TCAACTGACAATATTTTACT+TGG | + | chr4.4:6701712-6701731 | None:intergenic | 25.0% |
!! | TGAAATAGTTTTCACTAACA+GGG | - | chr4.4:6701078-6701097 | MS.gene030445:intron | 25.0% |
!! | TTTTCTCCATTAATTAGGTT+GGG | - | chr4.4:6701231-6701250 | MS.gene030445:intron | 25.0% |
!! | TTTTTCTCCATTAATTAGGT+TGG | - | chr4.4:6701230-6701249 | MS.gene030445:intron | 25.0% |
!!! | AATGAGATTTATTTTTGTGG+GGG | - | chr4.4:6702056-6702075 | MS.gene030445:intron | 25.0% |
!!! | ATCCTATTTTTTGTGGTTAA+AGG | - | chr4.4:6698691-6698710 | MS.gene030445:intron | 25.0% |
!!! | GTTTTAATTCAATTCCCAAA+AGG | + | chr4.4:6697865-6697884 | None:intergenic | 25.0% |
!!! | GTTTTAATTCGAATTCCAAT+TGG | + | chr4.4:6697899-6697918 | None:intergenic | 25.0% |
!!! | TTTTAGTTAGTTTTCGTGTT+TGG | - | chr4.4:6699392-6699411 | MS.gene030445:intron | 25.0% |
!!! | TTTTGGTTTTTGAAAACAGA+TGG | - | chr4.4:6700256-6700275 | MS.gene030445:intron | 25.0% |
AAACTTATCTTGCCCTTAAT+TGG | - | chr4.4:6700396-6700415 | MS.gene030445:CDS | 30.0% | |
AAATTGGCTGATATGGAAAA+TGG | + | chr4.4:6699214-6699233 | None:intergenic | 30.0% | |
AAGAAAAAAAAGGAAATGGG+TGG | + | chr4.4:6699591-6699610 | None:intergenic | 30.0% | |
AATATAGAAAGGCTTGGAAT+TGG | - | chr4.4:6698637-6698656 | MS.gene030445:CDS | 30.0% | |
AATGGCATCATATAAACACT+TGG | + | chr4.4:6699021-6699040 | None:intergenic | 30.0% | |
AATTGGCTGATATGGAAAAT+GGG | + | chr4.4:6699213-6699232 | None:intergenic | 30.0% | |
AGAAATAGAATGCAAAGCAA+TGG | + | chr4.4:6697989-6698008 | None:intergenic | 30.0% | |
AGATTACATAGATTCACATG+TGG | - | chr4.4:6701552-6701571 | MS.gene030445:intron | 30.0% | |
AGGAAAAATATAGAAAGGCT+TGG | - | chr4.4:6698631-6698650 | MS.gene030445:CDS | 30.0% | |
AGTATTCCCAACCTAATTAA+TGG | + | chr4.4:6701240-6701259 | None:intergenic | 30.0% | |
AGTCTCAATGAATGATGAAT+TGG | + | chr4.4:6699268-6699287 | None:intergenic | 30.0% | |
ATGAATTGGTGAATTCTGTA+GGG | - | chr4.4:6702406-6702425 | MS.gene030445:intron | 30.0% | |
ATGCTGGATTTCAAGAAAAT+TGG | + | chr4.4:6700681-6700700 | None:intergenic | 30.0% | |
ATGTATGCAATTAAGGATGA+AGG | - | chr4.4:6700495-6700514 | MS.gene030445:intron | 30.0% | |
ATTACCTACTTTGAATTCTC+AGG | + | chr4.4:6699333-6699352 | None:intergenic | 30.0% | |
CCACATTCATTGTAGTATTT+GGG | - | chr4.4:6702358-6702377 | MS.gene030445:intron | 30.0% | |
CTAATATTCCCAAAATGCTT+GGG | + | chr4.4:6700588-6700607 | None:intergenic | 30.0% | |
CTCTAATTTACATTACATGC+TGG | - | chr4.4:6698231-6698250 | MS.gene030445:intron | 30.0% | |
CTTCAAACTACAAGATAAGA+AGG | - | chr4.4:6701527-6701546 | MS.gene030445:intron | 30.0% | |
CTTCTTATCTTGTAGTTTGA+AGG | + | chr4.4:6701529-6701548 | None:intergenic | 30.0% | |
CTTGAATCATACCAAAATGT+GGG | + | chr4.4:6701839-6701858 | None:intergenic | 30.0% | |
GAAATTAATCTACAAACCAG+AGG | + | chr4.4:6699126-6699145 | None:intergenic | 30.0% | |
GCATACATATTTCAGTTCAA+AGG | - | chr4.4:6699926-6699945 | MS.gene030445:intron | 30.0% | |
GTAAAATATTGTCAGTTGAG+TGG | - | chr4.4:6701713-6701732 | MS.gene030445:intron | 30.0% | |
GTATATTCAACACAATCTAC+AGG | - | chr4.4:6700075-6700094 | MS.gene030445:intron | 30.0% | |
GTTTAGAAGTTGAAAGTTGA+CGG | - | chr4.4:6700913-6700932 | MS.gene030445:CDS | 30.0% | |
TAATTGAGATGAACTTTCCA+GGG | - | chr4.4:6699431-6699450 | MS.gene030445:intron | 30.0% | |
TCAAAGCTTATTCTACTATG+TGG | + | chr4.4:6702290-6702309 | None:intergenic | 30.0% | |
TCAGTAATTATAAGGGAATG+AGG | + | chr4.4:6697469-6697488 | None:intergenic | 30.0% | |
TCCACATTCATTGTAGTATT+TGG | - | chr4.4:6702357-6702376 | MS.gene030445:intron | 30.0% | |
TCTAATATTCCCAAAATGCT+TGG | + | chr4.4:6700589-6700608 | None:intergenic | 30.0% | |
TCTTGAATCATACCAAAATG+TGG | + | chr4.4:6701840-6701859 | None:intergenic | 30.0% | |
TGAAACAAAATTGGCTGATA+TGG | + | chr4.4:6699221-6699240 | None:intergenic | 30.0% | |
TGTATGCAATTAAGGATGAA+GGG | - | chr4.4:6700496-6700515 | MS.gene030445:intron | 30.0% | |
TTAATTGAGATGAACTTTCC+AGG | - | chr4.4:6699430-6699449 | MS.gene030445:intron | 30.0% | |
TTATTGCAACTTCAGATACT+CGG | - | chr4.4:6701746-6701765 | MS.gene030445:intron | 30.0% | |
TTGAATCATACCAAAATGTG+GGG | + | chr4.4:6701838-6701857 | None:intergenic | 30.0% | |
TTGTAGTTTGAAGGAAAATG+TGG | + | chr4.4:6701520-6701539 | None:intergenic | 30.0% | |
TTTATATTCTACCCGCAATT+AGG | + | chr4.4:6702188-6702207 | None:intergenic | 30.0% | |
! | AAACTTGAGTTTTCAATGTG+GGG | + | chr4.4:6699653-6699672 | None:intergenic | 30.0% |
! | AAACTTTTGTATCATGGAGT+TGG | + | chr4.4:6701285-6701304 | None:intergenic | 30.0% |
! | ACTCCATGATACAAAAGTTT+TGG | - | chr4.4:6701285-6701304 | MS.gene030445:intron | 30.0% |
! | ATCCCAAAACTTTTGTATCA+TGG | + | chr4.4:6701291-6701310 | None:intergenic | 30.0% |
! | ATTTTCTCAGGAACATGAAT+TGG | - | chr4.4:6702392-6702411 | MS.gene030445:intron | 30.0% |
! | CCAATTAACAAAAGTGGTTT+TGG | + | chr4.4:6701151-6701170 | None:intergenic | 30.0% |
! | CTATGAATGGTAACGTATAA+TGG | + | chr4.4:6701595-6701614 | None:intergenic | 30.0% |
! | CTCCATGATACAAAAGTTTT+GGG | - | chr4.4:6701286-6701305 | MS.gene030445:intron | 30.0% |
! | CTTTCTGTCATATTTTTCCT+GGG | - | chr4.4:6701177-6701196 | MS.gene030445:CDS | 30.0% |
! | TTTTCTTGAAATCCAGCATT+CGG | - | chr4.4:6700682-6700701 | MS.gene030445:intron | 30.0% |
!! | AAAAGATCTTTTAGGAAGTG+AGG | - | chr4.4:6700952-6700971 | MS.gene030445:CDS | 30.0% |
!! | AACAACAGAAGTACCAATTA+AGG | + | chr4.4:6700412-6700431 | None:intergenic | 30.0% |
!! | ACAACAGAAGTACCAATTAA+GGG | + | chr4.4:6700411-6700430 | None:intergenic | 30.0% |
!! | ACTTAAAGCTTGCTGTTAAT+TGG | - | chr4.4:6702319-6702338 | MS.gene030445:intron | 30.0% |
!! | ATGTTAAGTTGGTTATGTAC+AGG | - | chr4.4:6699240-6699259 | MS.gene030445:intron | 30.0% |
!! | CCAAAACCACTTTTGTTAAT+TGG | - | chr4.4:6701148-6701167 | MS.gene030445:CDS | 30.0% |
!! | CTTAAAGCTTGCTGTTAATT+GGG | - | chr4.4:6702320-6702339 | MS.gene030445:intron | 30.0% |
!! | TTACTTGATTTTAAGAGGGT+TGG | - | chr4.4:6697521-6697540 | MS.gene030445:intron | 30.0% |
!!! | CAACTAAGCCTTGATTTTTT+AGG | + | chr4.4:6700734-6700753 | None:intergenic | 30.0% |
!!! | CATCAGAAGTGTTTTAAGTT+AGG | - | chr4.4:6699185-6699204 | MS.gene030445:intron | 30.0% |
!!! | GATACAAAAGTTTTGGGATT+CGG | - | chr4.4:6701292-6701311 | MS.gene030445:intron | 30.0% |
AAAAATCAAGGCTTAGTTGC+TGG | - | chr4.4:6700735-6700754 | MS.gene030445:intron | 35.0% | |
AAAATTCTTGCATCTTCCTG+TGG | - | chr4.4:6700171-6700190 | MS.gene030445:intron | 35.0% | |
AAATCAGCCTAGTATTCAGA+AGG | + | chr4.4:6698927-6698946 | None:intergenic | 35.0% | |
AATGTGCAACTTCCTAAGAT+AGG | - | chr4.4:6701027-6701046 | MS.gene030445:intron | 35.0% | |
AATGTTGACAAAACAAGTGC+AGG | + | chr4.4:6698363-6698382 | None:intergenic | 35.0% | |
ACGAAGAAGAAGATTCACAA+AGG | - | chr4.4:6701336-6701355 | MS.gene030445:intron | 35.0% | |
AGAAGAAGATTCACAAAGGT+TGG | - | chr4.4:6701340-6701359 | MS.gene030445:intron | 35.0% | |
AGGGAAATTCAGACATTTAC+CGG | - | chr4.4:6698956-6698975 | MS.gene030445:intron | 35.0% | |
ATAAACACTTGGCTATGTCA+AGG | + | chr4.4:6699010-6699029 | None:intergenic | 35.0% | |
ATATTACCTCTATCAACCAC+AGG | + | chr4.4:6700190-6700209 | None:intergenic | 35.0% | |
ATCATTCATTGAGACTCTTC+GGG | - | chr4.4:6699272-6699291 | MS.gene030445:intron | 35.0% | |
ATCTTCAACTCTTGTTGAGA+CGG | - | chr4.4:6699986-6700005 | MS.gene030445:intron | 35.0% | |
ATGTATCTTGCATGTATTGC+TGG | - | chr4.4:6702212-6702231 | MS.gene030445:intron | 35.0% | |
ATTTACATTACATGCTGGTC+AGG | - | chr4.4:6698236-6698255 | MS.gene030445:intron | 35.0% | |
CAGATAAAAGGGAGAAGAAA+AGG | + | chr4.4:6700053-6700072 | None:intergenic | 35.0% | |
CAGTTTGCATTAGTAAAAGG+AGG | + | chr4.4:6701899-6701918 | None:intergenic | 35.0% | |
CATCATTCATTGAGACTCTT+CGG | - | chr4.4:6699271-6699290 | MS.gene030445:intron | 35.0% | |
CATGAATTGGTGAATTCTGT+AGG | - | chr4.4:6702405-6702424 | MS.gene030445:intron | 35.0% | |
CATTCCTGAGAATTCAAAGT+AGG | - | chr4.4:6699326-6699345 | MS.gene030445:intron | 35.0% | |
CCAAGAAGAAACAACACTAT+CGG | + | chr4.4:6698401-6698420 | None:intergenic | 35.0% | |
CCCAAATACTACAATGAATG+TGG | + | chr4.4:6702361-6702380 | None:intergenic | 35.0% | |
CTACAATGAATGTGGATCAT+AGG | + | chr4.4:6702353-6702372 | None:intergenic | 35.0% | |
GAAAATAAGGATTCAAGAGC+TGG | + | chr4.4:6700850-6700869 | None:intergenic | 35.0% | |
GAATAGCAAAACCTAATTGC+GGG | - | chr4.4:6702174-6702193 | MS.gene030445:intron | 35.0% | |
GACCAGTTTGCATTAGTAAA+AGG | + | chr4.4:6701902-6701921 | None:intergenic | 35.0% | |
GATATTAATCACATCAACCG+TGG | + | chr4.4:6700293-6700312 | None:intergenic | 35.0% | |
GCATGGCAAAATAATGTAAC+AGG | + | chr4.4:6698905-6698924 | None:intergenic | 35.0% | |
GGAATAGCAAAACCTAATTG+CGG | - | chr4.4:6702173-6702192 | MS.gene030445:intron | 35.0% | |
GTAACGTATAATGGTTGACA+TGG | + | chr4.4:6701586-6701605 | None:intergenic | 35.0% | |
GTAATATACTGGCATGAGAT+GGG | - | chr4.4:6700203-6700222 | MS.gene030445:intron | 35.0% | |
GTTCAAAGGATATCTTGATG+CGG | - | chr4.4:6699940-6699959 | MS.gene030445:CDS | 35.0% | |
GTTGTCAAAACTGTATCTGT+TGG | + | chr4.4:6699471-6699490 | None:intergenic | 35.0% | |
TAACTCACACGAAGACATTT+AGG | + | chr4.4:6697632-6697651 | None:intergenic | 35.0% | |
TCCTTGAAAATGATTTCCGA+GGG | - | chr4.4:6701447-6701466 | MS.gene030445:CDS | 35.0% | |
TGAACAACATTGCAACATGT+AGG | + | chr4.4:6698855-6698874 | None:intergenic | 35.0% | |
TGAATTCTCAGGAATGATTG+TGG | + | chr4.4:6699322-6699341 | None:intergenic | 35.0% | |
TGTATCTTGCATGTATTGCT+GGG | - | chr4.4:6702213-6702232 | MS.gene030445:intron | 35.0% | |
TGTATTTGCGATAAGATCCT+CGG | + | chr4.4:6698171-6698190 | None:intergenic | 35.0% | |
TGTCATCCCGAAAAGATTAA+TGG | - | chr4.4:6697547-6697566 | MS.gene030445:intron | 35.0% | |
TTCAAAGGATATCTTGATGC+GGG | - | chr4.4:6699941-6699960 | MS.gene030445:CDS | 35.0% | |
TTCATAGCAAGACTTACGTA+AGG | + | chr4.4:6699563-6699582 | None:intergenic | 35.0% | |
TTCCTTGAAAATGATTTCCG+AGG | - | chr4.4:6701446-6701465 | MS.gene030445:CDS | 35.0% | |
TTCTTCTTGGAATTGGATCA+GGG | - | chr4.4:6698411-6698430 | MS.gene030445:CDS | 35.0% | |
TTGTCATAACCTTGGAACAA+GGG | + | chr4.4:6698763-6698782 | None:intergenic | 35.0% | |
TTTCTTCTTGGAATTGGATC+AGG | - | chr4.4:6698410-6698429 | MS.gene030445:CDS | 35.0% | |
! | AAAGGTGACAACATTTTTCC+AGG | + | chr4.4:6700549-6700568 | None:intergenic | 35.0% |
! | AACAGAAGCAAGTTTAGGTT+TGG | - | chr4.4:6702471-6702490 | MS.gene030445:intron | 35.0% |
! | AACTTGAGTTTTCAATGTGG+GGG | + | chr4.4:6699652-6699671 | None:intergenic | 35.0% |
! | AGAACACGATCAAGTTGTAT+TGG | - | chr4.4:6701946-6701965 | MS.gene030445:intron | 35.0% |
! | AGTTGCGCCATTAATCTTTT+CGG | + | chr4.4:6697557-6697576 | None:intergenic | 35.0% |
! | CTCCTTTTACTAATGCAAAC+TGG | - | chr4.4:6701897-6701916 | MS.gene030445:intron | 35.0% |
! | GCTTTCTGTCATATTTTTCC+TGG | - | chr4.4:6701176-6701195 | MS.gene030445:CDS | 35.0% |
! | TAGTTTTCACTAACAGGGTT+TGG | - | chr4.4:6701083-6701102 | MS.gene030445:intron | 35.0% |
! | TTCTTCGTCATTTGAAGTCA+AGG | + | chr4.4:6701324-6701343 | None:intergenic | 35.0% |
!! | ACAGCAAGCTTTAAGTTTAG+AGG | + | chr4.4:6702315-6702334 | None:intergenic | 35.0% |
!! | AGGCTGATTTATGTTTTGCA+GGG | - | chr4.4:6698937-6698956 | MS.gene030445:intron | 35.0% |
!! | CTTTGCATTCTATTTCTGAC+CGG | - | chr4.4:6697992-6698011 | MS.gene030445:intron | 35.0% |
!! | GCATATCAGTTGATTTTCTC+AGG | - | chr4.4:6702380-6702399 | MS.gene030445:intron | 35.0% |
!! | GGTTGATAGAGGTAATATAC+TGG | - | chr4.4:6700192-6700211 | MS.gene030445:intron | 35.0% |
!! | GTATCGATTATTGCACATTC+TGG | + | chr4.4:6700115-6700134 | None:intergenic | 35.0% |
!! | GTGTTGTTTCTTCTTGGAAT+TGG | - | chr4.4:6698404-6698423 | MS.gene030445:CDS | 35.0% |
!! | TAGGCTGATTTATGTTTTGC+AGG | - | chr4.4:6698936-6698955 | MS.gene030445:intron | 35.0% |
!! | TTCATAGACCGTTGTTGTTT+CGG | + | chr4.4:6698485-6698504 | None:intergenic | 35.0% |
!!! | ACTGGCTATCCTATTTTTTG+TGG | - | chr4.4:6698684-6698703 | MS.gene030445:intron | 35.0% |
!!! | TCTTTTTTAACTCCGAATGC+TGG | + | chr4.4:6700697-6700716 | None:intergenic | 35.0% |
AAAATGTGGGGCAGGTTATT+GGG | + | chr4.4:6701826-6701845 | None:intergenic | 40.0% | |
AATATGCTGAGTCAGAAGCT+TGG | - | chr4.4:6702494-6702513 | MS.gene030445:CDS | 40.0% | |
AATGAGGAAGAGAATGTACG+TGG | + | chr4.4:6697453-6697472 | None:intergenic | 40.0% | |
ACTTACGTAAGGATACCACA+AGG | + | chr4.4:6699552-6699571 | None:intergenic | 40.0% | |
ACTTCCATCATTCAGAGAGT+TGG | - | chr4.4:6701787-6701806 | MS.gene030445:intron | 40.0% | |
AGATTGCACTTAGACTACTC+AGG | - | chr4.4:6702433-6702452 | MS.gene030445:intron | 40.0% | |
AGGAGTGGCAATTGTAGAAA+AGG | + | chr4.4:6699628-6699647 | None:intergenic | 40.0% | |
ATAGGATGAAATGGTCTAGG+AGG | + | chr4.4:6697419-6697438 | None:intergenic | 40.0% | |
ATATGATGCCATTGCTCGTA+TGG | - | chr4.4:6699028-6699047 | MS.gene030445:intron | 40.0% | |
ATATGCTGAGTCAGAAGCTT+GGG | - | chr4.4:6702495-6702514 | MS.gene030445:CDS | 40.0% | |
ATGTGAAGCGCATCAACAAT+TGG | + | chr4.4:6700139-6700158 | None:intergenic | 40.0% | |
ATTCAGACATTTACCGGTAG+TGG | - | chr4.4:6698962-6698981 | MS.gene030445:intron | 40.0% | |
CAAGTTATACCTTGTCTGTG+AGG | + | chr4.4:6698582-6698601 | None:intergenic | 40.0% | |
CTCAACAAGAGTTGAAGATG+CGG | + | chr4.4:6699985-6700004 | None:intergenic | 40.0% | |
CTTGTCATAACCTTGGAACA+AGG | + | chr4.4:6698764-6698783 | None:intergenic | 40.0% | |
CTTGTTCCAAGGTTATGACA+AGG | - | chr4.4:6698762-6698781 | MS.gene030445:intron | 40.0% | |
GAAATCACTGCGACTTTCAA+AGG | - | chr4.4:6698447-6698466 | MS.gene030445:CDS | 40.0% | |
GCGCTTCACATAATGCATAA+TGG | - | chr4.4:6700148-6700167 | MS.gene030445:intron | 40.0% | |
GCTTGACGCATTATAAGGAA+TGG | + | chr4.4:6701490-6701509 | None:intergenic | 40.0% | |
GGAAGATGGGTGAATGTAAA+AGG | + | chr4.4:6700567-6700586 | None:intergenic | 40.0% | |
GGTAATATACTGGCATGAGA+TGG | - | chr4.4:6700202-6700221 | MS.gene030445:intron | 40.0% | |
GTATCTTGCATGTATTGCTG+GGG | - | chr4.4:6702214-6702233 | MS.gene030445:intron | 40.0% | |
TAAAAGGGAGAAGAAAAGGC+AGG | + | chr4.4:6700049-6700068 | None:intergenic | 40.0% | |
TAATATCACTCATGCTGCTG+TGG | - | chr4.4:6700306-6700325 | MS.gene030445:intron | 40.0% | |
TACGGAACAGAAGCAAGTTT+AGG | - | chr4.4:6702466-6702485 | MS.gene030445:intron | 40.0% | |
TAGGTCTATTAGCGTTCTTC+AGG | - | chr4.4:6702566-6702585 | MS.gene030445:CDS | 40.0% | |
TCTTCTTGGAATTGGATCAG+GGG | - | chr4.4:6698412-6698431 | MS.gene030445:CDS | 40.0% | |
TGGATTCCTTGTCATAACCT+TGG | + | chr4.4:6698771-6698790 | None:intergenic | 40.0% | |
TGTCATAACCTTGGAACAAG+GGG | + | chr4.4:6698762-6698781 | None:intergenic | 40.0% | |
TTCGCATGTTAACGACGAAT+AGG | - | chr4.4:6701111-6701130 | MS.gene030445:CDS | 40.0% | |
TTGAAAATGATTTCCGAGGG+AGG | - | chr4.4:6701450-6701469 | MS.gene030445:CDS | 40.0% | |
! | AGTGAGGTCCGATTTTCAAT+AGG | - | chr4.4:6700968-6700987 | MS.gene030445:intron | 40.0% |
! | ATATGTGCACTGACGTTTCT+AGG | - | chr4.4:6701363-6701382 | MS.gene030445:CDS | 40.0% |
! | GCACAAAAAGCATGCATAAC+TGG | - | chr4.4:6698666-6698685 | MS.gene030445:CDS | 40.0% |
! | GTTGCGCCATTAATCTTTTC+GGG | + | chr4.4:6697556-6697575 | None:intergenic | 40.0% |
! | TCCCTCGGAAATCATTTTCA+AGG | + | chr4.4:6701451-6701470 | None:intergenic | 40.0% |
! | TGTTGAAGCACTCCAAAAGA+TGG | - | chr4.4:6698817-6698836 | MS.gene030445:intron | 40.0% |
!! | AGCTTGCTGTTAATTGGGAA+AGG | - | chr4.4:6702325-6702344 | MS.gene030445:intron | 40.0% |
!! | CATTTACCGGTAGTGGAAAA+CGG | - | chr4.4:6698969-6698988 | MS.gene030445:intron | 40.0% |
!! | CCGATAGTGTTGTTTCTTCT+TGG | - | chr4.4:6698398-6698417 | MS.gene030445:CDS | 40.0% |
!! | GCTTGCTGTTAATTGGGAAA+GGG | - | chr4.4:6702326-6702345 | MS.gene030445:intron | 40.0% |
!! | TCATAGACCGTTGTTGTTTC+GGG | + | chr4.4:6698484-6698503 | None:intergenic | 40.0% |
!! | TGAAGGTATCGACAAACACT+GGG | - | chr4.4:6699091-6699110 | MS.gene030445:intron | 40.0% |
!! | TTGAAGGTATCGACAAACAC+TGG | - | chr4.4:6699090-6699109 | MS.gene030445:intron | 40.0% |
!!! | CAGCATTTTGGTCTTAAACC+TGG | - | chr4.4:6700528-6700547 | MS.gene030445:intron | 40.0% |
AAATGTGGGGCAGGTTATTG+GGG | + | chr4.4:6701825-6701844 | None:intergenic | 45.0% | |
AACTTCAGATACTCGGAGCT+TGG | - | chr4.4:6701753-6701772 | MS.gene030445:intron | 45.0% | |
AAGAGAATGTACGTGGTGGT+GGG | + | chr4.4:6697446-6697465 | None:intergenic | 45.0% | |
AGCCTAGTATTCAGAAGGCA+TGG | + | chr4.4:6698922-6698941 | None:intergenic | 45.0% | |
AGTTGCACATTGCAAGCAGA+AGG | + | chr4.4:6701018-6701037 | None:intergenic | 45.0% | |
ATCATACCAAAATGTGGGGC+AGG | + | chr4.4:6701834-6701853 | None:intergenic | 45.0% | |
ATCGCCAACTCTCTGAATGA+TGG | + | chr4.4:6701794-6701813 | None:intergenic | 45.0% | |
ATGCCATTGCTCGTATGGAA+AGG | - | chr4.4:6699033-6699052 | MS.gene030445:intron | 45.0% | |
CAAAATGTGGGGCAGGTTAT+TGG | + | chr4.4:6701827-6701846 | None:intergenic | 45.0% | |
CCCAAAATGCTTGGGAAGAT+GGG | + | chr4.4:6700580-6700599 | None:intergenic | 45.0% | |
CGCATAGGATGAAATGGTCT+AGG | + | chr4.4:6697422-6697441 | None:intergenic | 45.0% | |
CTATGAAGCTTGTCGTCGAA+TGG | - | chr4.4:6698498-6698517 | MS.gene030445:intron | 45.0% | |
GAGGATGACGCTGATGATAA+CGG | - | chr4.4:6698060-6698079 | MS.gene030445:intron | 45.0% | |
GATTCCAATGCTTTGCTCTG+TGG | - | chr4.4:6698553-6698572 | MS.gene030445:intron | 45.0% | |
GATTCCACAGAGCAAAGCAT+TGG | + | chr4.4:6698560-6698579 | None:intergenic | 45.0% | |
GGAATGATTGTGGACAACGA+TGG | + | chr4.4:6699312-6699331 | None:intergenic | 45.0% | |
GTAAATGCTTCTCAGTACCC+AGG | + | chr4.4:6701197-6701216 | None:intergenic | 45.0% | |
TACTCAGGAACACGTGGTTA+CGG | - | chr4.4:6702448-6702467 | MS.gene030445:intron | 45.0% | |
TCCAAAAGATGGTGCAAGGT+TGG | - | chr4.4:6698828-6698847 | MS.gene030445:intron | 45.0% | |
TCCCAAAATGCTTGGGAAGA+TGG | + | chr4.4:6700581-6700600 | None:intergenic | 45.0% | |
TCTTCTTCCTTGAGCGAGTA+GGG | + | chr4.4:6697379-6697398 | None:intergenic | 45.0% | |
TGCACGCTTGACGCATTATA+AGG | + | chr4.4:6701495-6701514 | None:intergenic | 45.0% | |
TGCCATGCCTTCTGAATACT+AGG | - | chr4.4:6698917-6698936 | MS.gene030445:intron | 45.0% | |
TGCCATTGCTCGTATGGAAA+GGG | - | chr4.4:6699034-6699053 | MS.gene030445:intron | 45.0% | |
TGGTGAAACTGTAACAACCC+TGG | + | chr4.4:6699451-6699470 | None:intergenic | 45.0% | |
TTAGACTACTCAGGAACACG+TGG | - | chr4.4:6702442-6702461 | MS.gene030445:intron | 45.0% | |
! | ACCAACCTTGCACCATCTTT+TGG | + | chr4.4:6698832-6698851 | None:intergenic | 45.0% |
! | ACCCATCTTCCCAAGCATTT+TGG | - | chr4.4:6700576-6700595 | MS.gene030445:intron | 45.0% |
! | ACTTCTCCGTTTTCCACTAC+CGG | + | chr4.4:6698978-6698997 | None:intergenic | 45.0% |
! | AGATGGCATTGTTGTTGCCA+CGG | - | chr4.4:6700273-6700292 | MS.gene030445:intron | 45.0% |
! | AGGTACTGTGGATCTATTGC+TGG | - | chr4.4:6702023-6702042 | MS.gene030445:intron | 45.0% |
! | CAATAACCTGCCCCACATTT+TGG | - | chr4.4:6701825-6701844 | MS.gene030445:intron | 45.0% |
! | CCCATCTTCCCAAGCATTTT+GGG | - | chr4.4:6700577-6700596 | MS.gene030445:intron | 45.0% |
! | GTCATTTGAAGTCAAGGCCA+TGG | + | chr4.4:6701318-6701337 | None:intergenic | 45.0% |
! | TGAGTTTTCAATGTGGGGGA+AGG | + | chr4.4:6699648-6699667 | None:intergenic | 45.0% |
! | TGCAAGTGCTGCTATTGTGA+CGG | - | chr4.4:6699515-6699534 | MS.gene030445:intron | 45.0% |
! | TGCTTCAACAGCAAGAGTGT+CGG | + | chr4.4:6698807-6698826 | None:intergenic | 45.0% |
!! | ACGGTTGATGACAAACCTTG+TGG | - | chr4.4:6699534-6699553 | MS.gene030445:intron | 45.0% |
!! | CATCTTCCTGTGGTTGATAG+AGG | - | chr4.4:6700181-6700200 | MS.gene030445:intron | 45.0% |
!! | GAAGGTATCGACAAACACTG+GGG | - | chr4.4:6699092-6699111 | MS.gene030445:intron | 45.0% |
!! | GCTGCAATTGTTGCTGCTTT+AGG | - | chr4.4:6702547-6702566 | MS.gene030445:CDS | 45.0% |
!!! | AAAGTTTTGGGATTCGGCCA+TGG | - | chr4.4:6701298-6701317 | MS.gene030445:intron | 45.0% |
!! | AAAAATTAAAAGATTAAATT+TGG | + | chr4.4:6700798-6700817 | None:intergenic | 5.0% |
!! | AAAATTAAAAGATTAAATTT+GGG | + | chr4.4:6700797-6700816 | None:intergenic | 5.0% |
!!! | TTTTTAAAATAAATATAGTT+GGG | - | chr4.4:6697947-6697966 | MS.gene030445:CDS | 5.0% |
AATTGCAGCTCCAGCTGCAA+CGG | + | chr4.4:6702536-6702555 | None:intergenic | 50.0% | |
ACCTATAAGTCAGAGCTCCG+AGG | - | chr4.4:6698151-6698170 | MS.gene030445:CDS | 50.0% | |
ACTGGCATGAGATGGGAATC+AGG | - | chr4.4:6700210-6700229 | MS.gene030445:intron | 50.0% | |
ATTTCCGAGGGAGGAGAAAC+AGG | - | chr4.4:6701459-6701478 | MS.gene030445:CDS | 50.0% | |
CATTGCTCGTATGGAAAGGG+CGG | - | chr4.4:6699037-6699056 | MS.gene030445:intron | 50.0% | |
CTGTGGAATCCTCACAGACA+AGG | - | chr4.4:6698570-6698589 | MS.gene030445:intron | 50.0% | |
GAAGAGAATGTACGTGGTGG+TGG | + | chr4.4:6697447-6697466 | None:intergenic | 50.0% | |
GACTGTGCCCGAAACAACAA+CGG | - | chr4.4:6698474-6698493 | MS.gene030445:CDS | 50.0% | |
GAGGAAGAGAATGTACGTGG+TGG | + | chr4.4:6697450-6697469 | None:intergenic | 50.0% | |
GCAATTGCAGCAGCTGTTGA+AGG | - | chr4.4:6699074-6699093 | MS.gene030445:intron | 50.0% | |
GCACTCCAAAAGATGGTGCA+AGG | - | chr4.4:6698824-6698843 | MS.gene030445:intron | 50.0% | |
GGATGAAATGGTCTAGGAGG+AGG | + | chr4.4:6697416-6697435 | None:intergenic | 50.0% | |
GTCTTCTTCCTTGAGCGAGT+AGG | + | chr4.4:6697380-6697399 | None:intergenic | 50.0% | |
TCAAACCAGCCGTCTTTGCA+TGG | + | chr4.4:6702003-6702022 | None:intergenic | 50.0% | |
TCCAGCTGCAACGGTATGAT+AGG | + | chr4.4:6702527-6702546 | None:intergenic | 50.0% | |
TGAAGACACCCCTTGTTCCA+AGG | - | chr4.4:6698751-6698770 | MS.gene030445:intron | 50.0% | |
TGCACATTGCAAGCAGAAGG+CGG | + | chr4.4:6701015-6701034 | None:intergenic | 50.0% | |
TTTCAATGTGGGGGAAGGAG+TGG | + | chr4.4:6699643-6699662 | None:intergenic | 50.0% | |
TTTCCGAGGGAGGAGAAACA+GGG | - | chr4.4:6701460-6701479 | MS.gene030445:CDS | 50.0% | |
! | ACCACATACCTGACTAGCTG+TGG | + | chr4.4:6700332-6700351 | None:intergenic | 50.0% |
! | AGAGAATGTACGTGGTGGTG+GGG | + | chr4.4:6697445-6697464 | None:intergenic | 50.0% |
! | GGGTTCAGCAGTCAGCATTT+TGG | - | chr4.4:6700516-6700535 | MS.gene030445:intron | 50.0% |
! | GTGTCGGTAAGGACGAATAC+TGG | + | chr4.4:6698791-6698810 | None:intergenic | 50.0% |
! | TCCTCGGAGCTCTGACTTAT+AGG | + | chr4.4:6698155-6698174 | None:intergenic | 50.0% |
!! | CAACAGCAAGAGTGTCGGTA+AGG | + | chr4.4:6698802-6698821 | None:intergenic | 50.0% |
!! | GGTAGTGGAAAACGGAGAAG+TGG | - | chr4.4:6698977-6698996 | MS.gene030445:intron | 50.0% |
!! | TGCAAAGACGGCTGGTTTGA+AGG | - | chr4.4:6702003-6702022 | MS.gene030445:intron | 50.0% |
AAGGGCGGCTGAGAAAGGAA+AGG | - | chr4.4:6699052-6699071 | MS.gene030445:intron | 55.0% | |
AGATACTCGGAGCTTGGCAG+AGG | - | chr4.4:6701759-6701778 | MS.gene030445:intron | 55.0% | |
AGCCGTCTTTGCATGGTCCA+CGG | + | chr4.4:6701996-6702015 | None:intergenic | 55.0% | |
AGCCGTGGACCATGCAAAGA+CGG | - | chr4.4:6701991-6702010 | MS.gene030445:intron | 55.0% | |
ATGGAAAGGGCGGCTGAGAA+AGG | - | chr4.4:6699047-6699066 | MS.gene030445:intron | 55.0% | |
CAACTAGCCCTACTCGCTCA+AGG | - | chr4.4:6697369-6697388 | MS.gene030445:CDS | 55.0% | |
CGCCCTTTCCATACGAGCAA+TGG | + | chr4.4:6699039-6699058 | None:intergenic | 55.0% | |
GCCACAGCTAGTCAGGTATG+TGG | - | chr4.4:6700328-6700347 | MS.gene030445:intron | 55.0% | |
GCCTATCATACCGTTGCAGC+TGG | - | chr4.4:6702523-6702542 | MS.gene030445:CDS | 55.0% | |
GTGGGGCGCATAGGATGAAA+TGG | + | chr4.4:6697428-6697447 | None:intergenic | 55.0% | |
TGAGTCAGAAGCTTGGGCCT+CGG | - | chr4.4:6702501-6702520 | MS.gene030445:CDS | 55.0% | |
TGCAACGGTATGATAGGCCG+AGG | + | chr4.4:6702521-6702540 | None:intergenic | 55.0% | |
! | TCTCCCTGTTTCTCCTCCCT+CGG | + | chr4.4:6701466-6701485 | None:intergenic | 55.0% |
!! | CGGCTGGTTTGAAGGTACTG+TGG | - | chr4.4:6702011-6702030 | MS.gene030445:intron | 55.0% |
GTGGACCATGCAAAGACGGC+TGG | - | chr4.4:6701995-6702014 | MS.gene030445:intron | 60.0% | |
TAGTGATCTCGCTGCAGCCG+TGG | - | chr4.4:6701976-6701995 | MS.gene030445:intron | 60.0% | |
TGCTGTGGCCACAGCTAGTC+AGG | - | chr4.4:6700321-6700340 | MS.gene030445:intron | 60.0% | |
!! | CACTGGGGAGCATCTGCCTC+TGG | - | chr4.4:6699107-6699126 | MS.gene030445:intron | 65.0% |
!! | TACGTGGTGGTGGGGCGCAT+AGG | + | chr4.4:6697437-6697456 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 6697344 | 6702600 | 6697344 | ID=MS.gene030445 |
chr4.4 | mRNA | 6697344 | 6702600 | 6697344 | ID=MS.gene030445.t1;Parent=MS.gene030445 |
chr4.4 | exon | 6702491 | 6702600 | 6702491 | ID=MS.gene030445.t1.exon1;Parent=MS.gene030445.t1 |
chr4.4 | CDS | 6702491 | 6702600 | 6702491 | ID=cds.MS.gene030445.t1;Parent=MS.gene030445.t1 |
chr4.4 | exon | 6701353 | 6701512 | 6701353 | ID=MS.gene030445.t1.exon2;Parent=MS.gene030445.t1 |
chr4.4 | CDS | 6701353 | 6701512 | 6701353 | ID=cds.MS.gene030445.t1;Parent=MS.gene030445.t1 |
chr4.4 | exon | 6701099 | 6701231 | 6701099 | ID=MS.gene030445.t1.exon3;Parent=MS.gene030445.t1 |
chr4.4 | CDS | 6701099 | 6701231 | 6701099 | ID=cds.MS.gene030445.t1;Parent=MS.gene030445.t1 |
chr4.4 | exon | 6700816 | 6700986 | 6700816 | ID=MS.gene030445.t1.exon4;Parent=MS.gene030445.t1 |
chr4.4 | CDS | 6700816 | 6700986 | 6700816 | ID=cds.MS.gene030445.t1;Parent=MS.gene030445.t1 |
chr4.4 | exon | 6700601 | 6700682 | 6700601 | ID=MS.gene030445.t1.exon5;Parent=MS.gene030445.t1 |
chr4.4 | CDS | 6700601 | 6700682 | 6700601 | ID=cds.MS.gene030445.t1;Parent=MS.gene030445.t1 |
chr4.4 | exon | 6700379 | 6700492 | 6700379 | ID=MS.gene030445.t1.exon6;Parent=MS.gene030445.t1 |
chr4.4 | CDS | 6700379 | 6700492 | 6700379 | ID=cds.MS.gene030445.t1;Parent=MS.gene030445.t1 |
chr4.4 | exon | 6699937 | 6700003 | 6699937 | ID=MS.gene030445.t1.exon7;Parent=MS.gene030445.t1 |
chr4.4 | CDS | 6699937 | 6700003 | 6699937 | ID=cds.MS.gene030445.t1;Parent=MS.gene030445.t1 |
chr4.4 | exon | 6699742 | 6699847 | 6699742 | ID=MS.gene030445.t1.exon8;Parent=MS.gene030445.t1 |
chr4.4 | CDS | 6699742 | 6699847 | 6699742 | ID=cds.MS.gene030445.t1;Parent=MS.gene030445.t1 |
chr4.4 | exon | 6699602 | 6699669 | 6699602 | ID=MS.gene030445.t1.exon9;Parent=MS.gene030445.t1 |
chr4.4 | CDS | 6699602 | 6699669 | 6699602 | ID=cds.MS.gene030445.t1;Parent=MS.gene030445.t1 |
chr4.4 | exon | 6698587 | 6698696 | 6698587 | ID=MS.gene030445.t1.exon10;Parent=MS.gene030445.t1 |
chr4.4 | CDS | 6698587 | 6698696 | 6698587 | ID=cds.MS.gene030445.t1;Parent=MS.gene030445.t1 |
chr4.4 | exon | 6698371 | 6698504 | 6698371 | ID=MS.gene030445.t1.exon11;Parent=MS.gene030445.t1 |
chr4.4 | CDS | 6698371 | 6698504 | 6698371 | ID=cds.MS.gene030445.t1;Parent=MS.gene030445.t1 |
chr4.4 | exon | 6698098 | 6698183 | 6698098 | ID=MS.gene030445.t1.exon12;Parent=MS.gene030445.t1 |
chr4.4 | CDS | 6698098 | 6698183 | 6698098 | ID=cds.MS.gene030445.t1;Parent=MS.gene030445.t1 |
chr4.4 | exon | 6697920 | 6698009 | 6697920 | ID=MS.gene030445.t1.exon13;Parent=MS.gene030445.t1 |
chr4.4 | CDS | 6697920 | 6698009 | 6697920 | ID=cds.MS.gene030445.t1;Parent=MS.gene030445.t1 |
chr4.4 | exon | 6697344 | 6697517 | 6697344 | ID=MS.gene030445.t1.exon14;Parent=MS.gene030445.t1 |
chr4.4 | CDS | 6697344 | 6697517 | 6697344 | ID=cds.MS.gene030445.t1;Parent=MS.gene030445.t1 |
Gene Sequence |
Protein sequence |