Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72190.t1 | XP_013446995.1 | 98.3 | 534 | 9 | 0 | 1 | 534 | 1 | 534 | 2.00E-285 | 991.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72190.t1 | Q9FMV3 | 69.1 | 501 | 140 | 5 | 36 | 531 | 49 | 539 | 3.2e-183 | 642.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72190.t1 | A0A072TUB8 | 98.3 | 534 | 9 | 0 | 1 | 534 | 1 | 534 | 1.4e-285 | 991.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene72190 | MS.gene06229 | PPI |
MS.gene72190 | MS.gene055505 | PPI |
MS.gene071383 | MS.gene72190 | PPI |
MS.gene06229 | MS.gene72190 | PPI |
MS.gene72190 | MS.gene013153 | PPI |
MS.gene030445 | MS.gene72190 | PPI |
MS.gene72190 | MS.gene000935 | PPI |
MS.gene72190 | MS.gene030445 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72190.t1 | MTR_8g096850 | 98.315 | 534 | 9 | 0 | 1 | 534 | 1 | 534 | 0.0 | 1083 |
MS.gene72190.t1 | MTR_3g099100 | 77.101 | 476 | 103 | 2 | 37 | 511 | 36 | 506 | 0.0 | 731 |
MS.gene72190.t1 | MTR_8g094780 | 55.242 | 496 | 211 | 7 | 38 | 531 | 45 | 531 | 0.0 | 532 |
MS.gene72190.t1 | MTR_3g097010 | 50.980 | 510 | 230 | 9 | 25 | 531 | 23 | 515 | 3.37e-179 | 514 |
MS.gene72190.t1 | MTR_3g097010 | 50.320 | 469 | 215 | 8 | 66 | 531 | 1 | 454 | 2.35e-161 | 467 |
MS.gene72190.t1 | MTR_3g097010 | 47.843 | 510 | 208 | 10 | 25 | 531 | 23 | 477 | 2.91e-161 | 467 |
MS.gene72190.t1 | MTR_8g044820 | 69.811 | 53 | 16 | 0 | 38 | 90 | 47 | 99 | 1.99e-16 | 75.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72190.t1 | AT5G50640 | 63.447 | 528 | 168 | 5 | 2 | 513 | 8 | 526 | 0.0 | 668 |
MS.gene72190.t1 | AT5G50530 | 63.447 | 528 | 168 | 5 | 2 | 513 | 8 | 526 | 0.0 | 668 |
MS.gene72190.t1 | AT5G63490 | 66.667 | 501 | 152 | 5 | 36 | 531 | 49 | 539 | 0.0 | 638 |
MS.gene72190.t1 | AT5G63490 | 66.667 | 501 | 152 | 5 | 36 | 531 | 49 | 539 | 0.0 | 638 |
MS.gene72190.t1 | AT3G52950 | 58.568 | 461 | 178 | 7 | 38 | 494 | 60 | 511 | 0.0 | 533 |
MS.gene72190.t1 | AT3G52950 | 58.568 | 461 | 178 | 7 | 38 | 494 | 60 | 511 | 0.0 | 533 |
MS.gene72190.t1 | AT2G36500 | 53.846 | 507 | 212 | 10 | 27 | 531 | 46 | 532 | 0.0 | 521 |
Find 129 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAAATGTGGGGCAGGTTAT+TGG | 0.182786 | 4.2:+6999133 | None:intergenic |
GCTGCAATTGTTGCTGCTTT+AGG | 0.218996 | 4.2:-6998410 | MS.gene72190:CDS |
CAATAACCTGCCCCACATTT+TGG | 0.219976 | 4.2:-6999132 | MS.gene72190:intron |
TCATAGACCGTTGTTGTTTC+GGG | 0.238447 | 4.2:+7002476 | None:intergenic |
ACTCCATGATACAAAAGTTT+TGG | 0.250286 | 4.2:-6999672 | MS.gene72190:CDS |
GTATCGATTATTGCACATTC+TGG | 0.251129 | 4.2:+7000845 | None:intergenic |
TTCATAGACCGTTGTTGTTT+CGG | 0.251846 | 4.2:+7002475 | None:intergenic |
ACCAACCTTGCACCATCTTT+TGG | 0.267823 | 4.2:+7002128 | None:intergenic |
AAAATGTGGGGCAGGTTATT+GGG | 0.285380 | 4.2:+6999134 | None:intergenic |
TAGGTCTATTAGCGTTCTTC+AGG | 0.332964 | 4.2:-6998391 | MS.gene72190:CDS |
CATCATTCATTGAGACTCTT+CGG | 0.336729 | 4.2:-7001686 | MS.gene72190:CDS |
CTTCTTATCTTGTAGTTTGA+AGG | 0.341783 | 4.2:+6999431 | None:intergenic |
ATTTCCGAGGGAGGAGAAAC+AGG | 0.343924 | 4.2:-6999498 | MS.gene72190:CDS |
TGCACGCTTGACGCATTATA+AGG | 0.354189 | 4.2:+6999465 | None:intergenic |
AGTCTCAATGAATGATGAAT+TGG | 0.361576 | 4.2:+7001692 | None:intergenic |
AACAGAAGCAAGTTTAGGTT+TGG | 0.362547 | 4.2:-6998486 | MS.gene72190:CDS |
AGGGAAATTCAGACATTTAC+CGG | 0.365121 | 4.2:-7002001 | MS.gene72190:CDS |
ATTACCTACTTTGAATTCTC+AGG | 0.404211 | 4.2:+7001627 | None:intergenic |
GCGCTTCACATAATGCATAA+TGG | 0.412585 | 4.2:-7000809 | MS.gene72190:CDS |
ATTCAGACATTTACCGGTAG+TGG | 0.414318 | 4.2:-7001995 | MS.gene72190:CDS |
CATCTTCCTGTGGTTGATAG+AGG | 0.414498 | 4.2:-7000776 | MS.gene72190:intron |
TACGGAACAGAAGCAAGTTT+AGG | 0.417935 | 4.2:-6998491 | MS.gene72190:CDS |
CTTCAAACTACAAGATAAGA+AGG | 0.424338 | 4.2:-6999430 | MS.gene72190:CDS |
GTGTCGGTAAGGACGAATAC+TGG | 0.424729 | 4.2:+7002169 | None:intergenic |
CACTGGGGAGCATCTGCCTC+TGG | 0.434693 | 4.2:-7001850 | MS.gene72190:intron |
TGCTGTGGCCACAGCCAGTC+AGG | 0.435429 | 4.2:-7000636 | MS.gene72190:intron |
GAAGAGAATGTACGTGGTGG+TGG | 0.446340 | 4.2:+7003513 | None:intergenic |
AGAACACGATCAAGTTGTAT+TGG | 0.448245 | 4.2:-6999011 | MS.gene72190:CDS |
ATCATTCATTGAGACTCTTC+GGG | 0.450767 | 4.2:-7001685 | MS.gene72190:CDS |
ATATGATGCCATTGCTCGTA+TGG | 0.459385 | 4.2:-7001929 | MS.gene72190:CDS |
GCCTATCATACCGTTGCAGC+TGG | 0.459706 | 4.2:-6998434 | MS.gene72190:CDS |
ATATGCTGAGTCAGAAGCTT+GGG | 0.462080 | 4.2:-6998462 | MS.gene72190:CDS |
TCCAGCTGCAACGGTATGAT+AGG | 0.464208 | 4.2:+6998433 | None:intergenic |
TTCTTCGTCATTTGAAGTCA+AGG | 0.465007 | 4.2:+6999636 | None:intergenic |
TGCAAAGACGGCTGGTTTGA+AGG | 0.470321 | 4.2:-6998954 | MS.gene72190:intron |
TCTTCTTCCTTGAGCGAGTA+GGG | 0.493254 | 4.2:+7003581 | None:intergenic |
AACTTCAGATACTCGGAGCT+TGG | 0.494194 | 4.2:-6999204 | MS.gene72190:intron |
ATCGCCAACTCTCTGAATGA+TGG | 0.494800 | 4.2:+6999166 | None:intergenic |
CTATGAAGCTTGTCGTCGAA+TGG | 0.496303 | 4.2:-7002459 | MS.gene72190:CDS |
GCAATTGCAGCAGCTGTTGA+AGG | 0.501331 | 4.2:-7001883 | MS.gene72190:CDS |
TCTCCCTGTTTCTCCTCCCT+CGG | 0.503845 | 4.2:+6999494 | None:intergenic |
ACTTCCATCATTCAGAGAGT+TGG | 0.506822 | 4.2:-6999170 | MS.gene72190:CDS |
CATTTACCGGTAGTGGAAAA+CGG | 0.507176 | 4.2:-7001988 | MS.gene72190:CDS |
TTGAAGGTATTGACAAACAC+TGG | 0.508695 | 4.2:-7001867 | MS.gene72190:CDS |
CGCCCTTTCCATACGAGCAA+TGG | 0.512206 | 4.2:+7001921 | None:intergenic |
ATGTGAAGCGCATCAACAAT+TGG | 0.513552 | 4.2:+7000821 | None:intergenic |
ACCACATACCTGACTGGCTG+TGG | 0.513736 | 4.2:+7000628 | None:intergenic |
GTGGGGCGCATAGGATGAAA+TGG | 0.513937 | 4.2:+7003532 | None:intergenic |
TTCAAAGGATATCTTGATGC+GGG | 0.515248 | 4.2:-7001016 | MS.gene72190:CDS |
GAAATCACTGCGACTTTCAA+AGG | 0.517175 | 4.2:-7002510 | MS.gene72190:CDS |
TACTCAGGAACACGTGGTTA+CGG | 0.517956 | 4.2:-6998509 | MS.gene72190:CDS |
ATCATACCAAAATGTGGGGC+AGG | 0.520469 | 4.2:+6999126 | None:intergenic |
ATGGAAAGGGCGGCTGAGAA+AGG | 0.521302 | 4.2:-7001910 | MS.gene72190:CDS |
TGGATTCCTTGTCATAACCT+TGG | 0.527593 | 4.2:+7002189 | None:intergenic |
TGAGTCAGAAGCTTGGGCCT+CGG | 0.530803 | 4.2:-6998456 | MS.gene72190:CDS |
CGCATAGGATGAAATGGTCT+AGG | 0.531448 | 4.2:+7003538 | None:intergenic |
AACAAAACCACATACCTGAC+TGG | 0.533225 | 4.2:+7000622 | None:intergenic |
TCTTGAATCATACCAAAATG+TGG | 0.534435 | 4.2:+6999120 | None:intergenic |
TGCCATTGCTCGTATGGAAA+GGG | 0.534986 | 4.2:-7001923 | MS.gene72190:CDS |
GTGGACCATGCAAAGACGGC+TGG | 0.535070 | 4.2:-6998962 | MS.gene72190:CDS |
AGATACTCGGAGCTTGGCAG+AGG | 0.539192 | 4.2:-6999198 | MS.gene72190:CDS |
TGCAAAATGTCTCGAAAGAG+TGG | 0.540163 | 4.2:-7003619 | None:intergenic |
CTTGAATCATACCAAAATGT+GGG | 0.543101 | 4.2:+6999121 | None:intergenic |
ATCTTCAACTCTTGTTGAGA+CGG | 0.545684 | 4.2:-7000971 | MS.gene72190:intron |
ATGCCATTGCTCGTATGGAA+AGG | 0.548086 | 4.2:-7001924 | MS.gene72190:CDS |
AAGAGAATGTACGTGGTGGT+GGG | 0.552945 | 4.2:+7003514 | None:intergenic |
TTATTGCAACTTCAGATACT+CGG | 0.553093 | 4.2:-6999211 | MS.gene72190:intron |
TTCCTTGAAAATGATTTCCG+AGG | 0.553756 | 4.2:-6999511 | MS.gene72190:CDS |
GTCTTCTTCCTTGAGCGAGT+AGG | 0.554885 | 4.2:+7003580 | None:intergenic |
AGCCGTCTTTGCATGGTCCA+CGG | 0.555075 | 4.2:+6998964 | None:intergenic |
GATTCCACAGAGCAAAGCAT+TGG | 0.556200 | 4.2:+7002400 | None:intergenic |
GCATACATATTTCAGTTCAA+AGG | 0.556886 | 4.2:-7001031 | MS.gene72190:intron |
TCAAACCAGCCGTCTTTGCA+TGG | 0.559620 | 4.2:+6998957 | None:intergenic |
TGAAGACACCCCTTGTTCCA+AGG | 0.560839 | 4.2:-7002206 | MS.gene72190:CDS |
GATTCCAATGCTTTGCTCTG+TGG | 0.561199 | 4.2:-7002404 | MS.gene72190:CDS |
TGCAACGGTATGATAGGCCG+AGG | 0.561292 | 4.2:+6998439 | None:intergenic |
TGAATTCTCAGGAATGATTG+TGG | 0.562019 | 4.2:+7001638 | None:intergenic |
AAATGTGGGGCAGGTTATTG+GGG | 0.564202 | 4.2:+6999135 | None:intergenic |
GGATGAAATGGTCTAGGAGG+AGG | 0.564953 | 4.2:+7003544 | None:intergenic |
TACGTGGTGGTGGGGCGCAT+AGG | 0.569019 | 4.2:+7003523 | None:intergenic |
CAACAGCAAGAGTGTCGGTA+AGG | 0.571475 | 4.2:+7002158 | None:intergenic |
GCTTGACGCATTATAAGGAA+TGG | 0.572553 | 4.2:+6999470 | None:intergenic |
TCCTTGAAAATGATTTCCGA+GGG | 0.576217 | 4.2:-6999510 | MS.gene72190:CDS |
AATTGCAGCTCCAGCTGCAA+CGG | 0.581006 | 4.2:+6998424 | None:intergenic |
AGCCGTGGACCATGCAAAGA+CGG | 0.581286 | 4.2:-6998966 | MS.gene72190:CDS |
AAAATTCTTGCATCTTCCTG+TGG | 0.582586 | 4.2:-7000786 | MS.gene72190:CDS |
TTGAAAATGATTTCCGAGGG+AGG | 0.583648 | 4.2:-6999507 | MS.gene72190:CDS |
AATATGCTGAGTCAGAAGCT+TGG | 0.584912 | 4.2:-6998463 | MS.gene72190:CDS |
TAATATCACTCATGCTGCTG+TGG | 0.585105 | 4.2:-7000651 | MS.gene72190:CDS |
AGAGAATGTACGTGGTGGTG+GGG | 0.585727 | 4.2:+7003515 | None:intergenic |
TTGTCATAACCTTGGAACAA+GGG | 0.586424 | 4.2:+7002197 | None:intergenic |
AGATTGCACTTAGACTACTC+AGG | 0.587629 | 4.2:-6998524 | MS.gene72190:CDS |
GTCATTTGAAGTCAAGGCCA+TGG | 0.588808 | 4.2:+6999642 | None:intergenic |
CTTGTCATAACCTTGGAACA+AGG | 0.590488 | 4.2:+7002196 | None:intergenic |
TAGTGATCTCGCTGCAGCCG+TGG | 0.596686 | 4.2:-6998981 | MS.gene72190:CDS |
CAACTAGCCCTACTCGCTCA+AGG | 0.597128 | 4.2:-7003588 | MS.gene72190:CDS |
TGCAAGTGCTGCTATTGTGA+CGG | 0.597619 | 4.2:-7001442 | MS.gene72190:CDS |
TTGTAGTTTGAAGGAAAATG+TGG | 0.597790 | 4.2:+6999440 | None:intergenic |
GTTGTCAAAACTGTATCTGT+TGG | 0.601039 | 4.2:+7001489 | None:intergenic |
ATATTACCTCTATCAACCAC+AGG | 0.601445 | 4.2:+7000770 | None:intergenic |
CTGTGGAATCCTCACAGACA+AGG | 0.604230 | 4.2:-7002387 | MS.gene72190:intron |
CAAGTTATACCTTGTCTGTG+AGG | 0.605040 | 4.2:+7002378 | None:intergenic |
TTTCCGAGGGAGGAGAAACA+GGG | 0.613349 | 4.2:-6999497 | MS.gene72190:CDS |
GCACTCCAAAAGATGGTGCA+AGG | 0.613444 | 4.2:-7002133 | MS.gene72190:intron |
ATAAACACTTGGCTATGTCA+AGG | 0.616888 | 4.2:+7001950 | None:intergenic |
TGTTGAAGCACTCCAAAAGA+TGG | 0.621416 | 4.2:-7002140 | MS.gene72190:CDS |
TGAAGGTATTGACAAACACT+GGG | 0.622475 | 4.2:-7001866 | MS.gene72190:CDS |
TGCTTCAACAGCAAGAGTGT+CGG | 0.623821 | 4.2:+7002153 | None:intergenic |
TGTCATAACCTTGGAACAAG+GGG | 0.627176 | 4.2:+7002198 | None:intergenic |
GACTGTGCCCGAAACAACAA+CGG | 0.627509 | 4.2:-7002483 | MS.gene72190:CDS |
CTTGTTCCAAGGTTATGACA+AGG | 0.630832 | 4.2:-7002195 | MS.gene72190:CDS |
TTCAAACTACAAGATAAGAA+GGG | 0.633262 | 4.2:-6999429 | MS.gene72190:CDS |
GGTAGTGGAAAACGGAGAAG+TGG | 0.637417 | 4.2:-7001980 | MS.gene72190:CDS |
AATGGCATCATATAAACACT+TGG | 0.642839 | 4.2:+7001939 | None:intergenic |
CTCAACAAGAGTTGAAGATG+CGG | 0.646697 | 4.2:+7000975 | None:intergenic |
AGATGGCATTGTTGTTGCCA+CGG | 0.647116 | 4.2:-7000684 | MS.gene72190:CDS |
CATTGCTCGTATGGAAAGGG+CGG | 0.647683 | 4.2:-7001920 | MS.gene72190:CDS |
GTTCAAAGGATATCTTGATG+CGG | 0.648918 | 4.2:-7001017 | MS.gene72190:CDS |
ATAGGATGAAATGGTCTAGG+AGG | 0.655436 | 4.2:+7003541 | None:intergenic |
TTGAATCATACCAAAATGTG+GGG | 0.658177 | 4.2:+6999122 | None:intergenic |
GATATTAATCACATCAACCG+TGG | 0.685232 | 4.2:+7000667 | None:intergenic |
AAGGGCGGCTGAGAAAGGAA+AGG | 0.690082 | 4.2:-7001905 | MS.gene72190:CDS |
ACGAAGAAGAAGATTCACAA+AGG | 0.692407 | 4.2:-6999621 | MS.gene72190:intron |
TTAGACTACTCAGGAACACG+TGG | 0.696933 | 4.2:-6998515 | MS.gene72190:CDS |
GGAATGATTGTGGACAACGA+TGG | 0.709258 | 4.2:+7001648 | None:intergenic |
AGATTACATAGATTCACATG+TGG | 0.725577 | 4.2:-6999405 | MS.gene72190:intron |
ACTTACGTAAGGATACCACA+AGG | 0.768864 | 4.2:+7001408 | None:intergenic |
ACGGTTGATGACAAACCTTG+TGG | 0.796530 | 4.2:-7001423 | MS.gene72190:CDS |
GAAGGTATTGACAAACACTG+GGG | 0.808367 | 4.2:-7001865 | MS.gene72190:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CTTTTTAAAATAAATATAGT+TGG | - | chr4.2:6998981-6999000 | MS.gene72190:CDS | 10.0% |
!! | ATAATCTATACATAAATGAA+AGG | + | chr4.2:6998628-6998647 | None:intergenic | 15.0% |
!! | ATAATTAATGAGAAAAATCA+CGG | - | chr4.2:6998815-6998834 | MS.gene72190:intron | 15.0% |
!! | TATTTAAGTACTAGAAAATA+AGG | + | chr4.2:7001898-7001917 | None:intergenic | 15.0% |
!! | TCCAATTTAATTAAACAAAA+AGG | - | chr4.2:7003279-7003298 | MS.gene72190:intron | 15.0% |
!!! | AAATTTGTAGAGTAAATTTT+TGG | - | chr4.2:7000784-7000803 | MS.gene72190:CDS | 15.0% |
!!! | ATCTAAATCTAGTTTTATTT+GGG | - | chr4.2:7001047-7001066 | MS.gene72190:intron | 15.0% |
!!! | GTTCTATTAATTTGAATAAT+TGG | - | chr4.2:6999070-6999089 | MS.gene72190:intron | 15.0% |
!!! | TAAATGAGATTTATTTTTGT+GGG | - | chr4.2:7003089-7003108 | MS.gene72190:intron | 15.0% |
!!! | TATCTAAATCTAGTTTTATT+TGG | - | chr4.2:7001046-7001065 | MS.gene72190:intron | 15.0% |
!!! | TCCTTTTTGTTTAATTAAAT+TGG | + | chr4.2:7003283-7003302 | None:intergenic | 15.0% |
!!! | TTAAATGAGATTTATTTTTG+TGG | - | chr4.2:7003088-7003107 | MS.gene72190:intron | 15.0% |
!!! | TTTAGCTTAAACAAAAAAAA+AGG | + | chr4.2:7000392-7000411 | None:intergenic | 15.0% |
!! | AACTCAAGTTTATGTTTAAT+TGG | - | chr4.2:7000697-7000716 | MS.gene72190:intron | 20.0% |
!! | AACTTAACATGAAACAAAAT+TGG | + | chr4.2:7000265-7000284 | None:intergenic | 20.0% |
!! | AATCAGAAAAATATCAATGA+AGG | + | chr4.2:7001273-7001292 | None:intergenic | 20.0% |
!! | ACATAAATGTAATCTATGAA+TGG | + | chr4.2:7002643-7002662 | None:intergenic | 20.0% |
!! | ACATTTCGAAAAGAAAAAAA+AGG | + | chr4.2:7000636-7000655 | None:intergenic | 20.0% |
!! | ATGTGATTGCAATATAAAAA+TGG | - | chr4.2:7003187-7003206 | MS.gene72190:intron | 20.0% |
!! | CTTATAAACCTAAAAAATCA+AGG | - | chr4.2:7001758-7001777 | MS.gene72190:intron | 20.0% |
!! | GAAAAGAAAAAAAAGGAAAT+GGG | + | chr4.2:7000629-7000648 | None:intergenic | 20.0% |
!! | TAAGTTTACAATTATTTCGA+CGG | + | chr4.2:7001418-7001437 | None:intergenic | 20.0% |
!! | TCTTAATATGTATGCAATTA+AGG | - | chr4.2:7001523-7001542 | MS.gene72190:intron | 20.0% |
!! | TTAATTGGAGTATATATTTC+TGG | - | chr4.2:7000712-7000731 | MS.gene72190:intron | 20.0% |
!! | TTATTACTTGTTTAACAAGA+AGG | - | chr4.2:6999646-6999665 | MS.gene72190:CDS | 20.0% |
!!! | AAATAAATCTCATTTAAGAC+TGG | + | chr4.2:7003085-7003104 | None:intergenic | 20.0% |
!!! | AAATGAGATTTATTTTTGTG+GGG | - | chr4.2:7003090-7003109 | MS.gene72190:intron | 20.0% |
!!! | AATTTTGTTTCATGTTAAGT+TGG | - | chr4.2:7000264-7000283 | MS.gene72190:intron | 20.0% |
!!! | ATCATTTTTCTCCATTAATT+AGG | - | chr4.2:7002261-7002280 | MS.gene72190:intron | 20.0% |
!!! | ATTCATTACTTGATTTTAAG+AGG | - | chr4.2:6998551-6998570 | MS.gene72190:intron | 20.0% |
!!! | ATTTTCTACCTATTGAAAAT+CGG | + | chr4.2:7002014-7002033 | None:intergenic | 20.0% |
!!! | CATTGATATTTTTCTGATTT+TGG | - | chr4.2:7001274-7001293 | MS.gene72190:intron | 20.0% |
!!! | TAATATTTTCTTCCTATCTT+AGG | + | chr4.2:7002077-7002096 | None:intergenic | 20.0% |
!!! | TCAAGATTTTTTTGTTCAAT+AGG | - | chr4.2:6998843-6998862 | MS.gene72190:intron | 20.0% |
!!! | TGAGATTTAAAAGATCTTTT+AGG | - | chr4.2:7001979-7001998 | MS.gene72190:CDS | 20.0% |
!!! | TTAATGTCATTAAGTATTGT+GGG | - | chr4.2:7000914-7000933 | MS.gene72190:intron | 20.0% |
!!! | TTAATTTGAATAATTGGATG+AGG | - | chr4.2:6999076-6999095 | MS.gene72190:intron | 20.0% |
!!! | TTACTCTCTTATTTCTAATT+AGG | - | chr4.2:7000193-7000212 | MS.gene72190:intron | 20.0% |
!!! | TTCATTACTTGATTTTAAGA+GGG | - | chr4.2:6998552-6998571 | MS.gene72190:intron | 20.0% |
!!! | TTTAATGTCATTAAGTATTG+TGG | - | chr4.2:7000913-7000932 | MS.gene72190:intron | 20.0% |
!!! | TTTTCAATAGGTAGAAAATT+TGG | - | chr4.2:7002015-7002034 | MS.gene72190:intron | 20.0% |
!!! | TTTTCTAGTACTTAAATAAC+TGG | - | chr4.2:7001900-7001919 | MS.gene72190:CDS | 20.0% |
!!! | TTTTGATGTTTTTCTTTATC+CGG | + | chr4.2:6999049-6999068 | None:intergenic | 20.0% |
! | AAACAAATATCTGTACCAAT+TGG | - | chr4.2:6998916-6998935 | MS.gene72190:intron | 25.0% |
! | AAGCACTTACACATTATTAA+TGG | - | chr4.2:7002443-7002462 | MS.gene72190:CDS | 25.0% |
! | AAGTTAATTATGCATGTAGA+AGG | - | chr4.2:6999161-6999180 | MS.gene72190:CDS | 25.0% |
! | AAGTTCATCTCAATTAACTT+CGG | + | chr4.2:7000462-7000481 | None:intergenic | 25.0% |
! | ACATCAATTAAGTATTCTTC+TGG | + | chr4.2:6999135-6999154 | None:intergenic | 25.0% |
! | ACCGAAAGTAATTATATTCT+AGG | - | chr4.2:6998874-6998893 | MS.gene72190:intron | 25.0% |
! | ATATAAAGCAAAAGCCTAAA+TGG | - | chr4.2:6999299-6999318 | MS.gene72190:intron | 25.0% |
! | ATCCTTTAACCACAAAAAAT+AGG | + | chr4.2:6999731-6999750 | None:intergenic | 25.0% |
! | ATGTGAGATCAGTAATTATA+AGG | + | chr4.2:6998512-6998531 | None:intergenic | 25.0% |
! | CAAGAAGGAAAAATATAGAA+AGG | - | chr4.2:6999661-6999680 | MS.gene72190:CDS | 25.0% |
! | CATCAATTAAGTATTCTTCT+GGG | + | chr4.2:6999134-6999153 | None:intergenic | 25.0% |
! | CGAAAAGAAAAAAAAGGAAA+TGG | + | chr4.2:7000630-7000649 | None:intergenic | 25.0% |
! | CTAAAACCAATTAACAAAAG+TGG | + | chr4.2:7002192-7002211 | None:intergenic | 25.0% |
! | GATTATTCACTTTGTAGTTA+TGG | + | chr4.2:6998735-6998754 | None:intergenic | 25.0% |
! | GCCTAGAATATAATTACTTT+CGG | + | chr4.2:6998878-6998897 | None:intergenic | 25.0% |
! | GGATAAAGAAAAACATCAAA+AGG | - | chr4.2:6999048-6999067 | MS.gene72190:intron | 25.0% |
! | TAGAATATAATTACTTTCGG+TGG | + | chr4.2:6998875-6998894 | None:intergenic | 25.0% |
! | TCAAGAATATTCAACCATTT+AGG | + | chr4.2:6999316-6999335 | None:intergenic | 25.0% |
! | TGAATATACGTCAGATAAAA+GGG | + | chr4.2:7001099-7001118 | None:intergenic | 25.0% |
! | TGAATATTCTTGAATCTGTT+AGG | - | chr4.2:6999323-6999342 | MS.gene72190:intron | 25.0% |
! | TGTGAGATCAGTAATTATAA+GGG | + | chr4.2:6998511-6998530 | None:intergenic | 25.0% |
! | TTCAAACTACAAGATAAGAA+GGG | - | chr4.2:7002563-7002582 | MS.gene72190:intron | 25.0% |
! | TTGAATATACGTCAGATAAA+AGG | + | chr4.2:7001100-7001119 | None:intergenic | 25.0% |
! | TTGGGAAAAAACTTATTGAA+CGG | + | chr4.2:7001814-7001833 | None:intergenic | 25.0% |
!! | AATTATATTCTAGGCCTTTT+GGG | - | chr4.2:6998883-6998902 | MS.gene72190:intron | 25.0% |
!! | ATAAACTTGAGTTTTCAATG+TGG | + | chr4.2:7000690-7000709 | None:intergenic | 25.0% |
!! | ATGAAATAGTTTTCACTAAC+AGG | - | chr4.2:7002112-7002131 | MS.gene72190:intron | 25.0% |
!! | TAAACTTGAGTTTTCAATGT+GGG | + | chr4.2:7000689-7000708 | None:intergenic | 25.0% |
!! | TAATTATATTCTAGGCCTTT+TGG | - | chr4.2:6998882-6998901 | MS.gene72190:intron | 25.0% |
!! | TCAACTGACAATATTTTACT+TGG | + | chr4.2:7002747-7002766 | None:intergenic | 25.0% |
!! | TGAAATAGTTTTCACTAACA+GGG | - | chr4.2:7002113-7002132 | MS.gene72190:intron | 25.0% |
!! | TTTTCTCCATTAATTAGGTT+GGG | - | chr4.2:7002266-7002285 | MS.gene72190:intron | 25.0% |
!! | TTTTTCTCCATTAATTAGGT+TGG | - | chr4.2:7002265-7002284 | MS.gene72190:intron | 25.0% |
!!! | AATGAGATTTATTTTTGTGG+GGG | - | chr4.2:7003091-7003110 | MS.gene72190:intron | 25.0% |
!!! | ATCCTATTTTTTGTGGTTAA+AGG | - | chr4.2:6999726-6999745 | MS.gene72190:intron | 25.0% |
!!! | GTTTTAATTCAATTCCCAAA+AGG | + | chr4.2:6998900-6998919 | None:intergenic | 25.0% |
!!! | GTTTTAATTCGAATTCCAAT+TGG | + | chr4.2:6998934-6998953 | None:intergenic | 25.0% |
!!! | TTTTAGTTAGTTTTCGTGTT+TGG | - | chr4.2:7000427-7000446 | MS.gene72190:intron | 25.0% |
!!! | TTTTGGTTTTTGAAAACAGA+TGG | - | chr4.2:7001291-7001310 | MS.gene72190:intron | 25.0% |
AAACTTATCTTGCCCTTAAT+TGG | - | chr4.2:7001431-7001450 | MS.gene72190:CDS | 30.0% | |
AAATTGGCTGATATGGAAAA+TGG | + | chr4.2:7000249-7000268 | None:intergenic | 30.0% | |
AAGAAAAAAAAGGAAATGGG+TGG | + | chr4.2:7000626-7000645 | None:intergenic | 30.0% | |
AATATAGAAAGGCTTGGAAT+TGG | - | chr4.2:6999672-6999691 | MS.gene72190:CDS | 30.0% | |
AATGGCATCATATAAACACT+TGG | + | chr4.2:7000056-7000075 | None:intergenic | 30.0% | |
AATTGGCTGATATGGAAAAT+GGG | + | chr4.2:7000248-7000267 | None:intergenic | 30.0% | |
AGAAATAGAATGCAAAGCAA+TGG | + | chr4.2:6999024-6999043 | None:intergenic | 30.0% | |
AGATTACATAGATTCACATG+TGG | - | chr4.2:7002587-7002606 | MS.gene72190:intron | 30.0% | |
AGGAAAAATATAGAAAGGCT+TGG | - | chr4.2:6999666-6999685 | MS.gene72190:CDS | 30.0% | |
AGTATTCCCAACCTAATTAA+TGG | + | chr4.2:7002275-7002294 | None:intergenic | 30.0% | |
AGTCTCAATGAATGATGAAT+TGG | + | chr4.2:7000303-7000322 | None:intergenic | 30.0% | |
ATGAATTGGTGAATTCTGTA+GGG | - | chr4.2:7003441-7003460 | MS.gene72190:intron | 30.0% | |
ATGCTGGATTTCAAGAAAAT+TGG | + | chr4.2:7001716-7001735 | None:intergenic | 30.0% | |
ATGTATGCAATTAAGGATGA+AGG | - | chr4.2:7001530-7001549 | MS.gene72190:intron | 30.0% | |
ATTACCTACTTTGAATTCTC+AGG | + | chr4.2:7000368-7000387 | None:intergenic | 30.0% | |
CCACATTCATTGTAGTATTT+GGG | - | chr4.2:7003393-7003412 | MS.gene72190:intron | 30.0% | |
CTAATATTCCCAAAATGCTT+GGG | + | chr4.2:7001623-7001642 | None:intergenic | 30.0% | |
CTCTAATTTACATTACATGC+TGG | - | chr4.2:6999266-6999285 | MS.gene72190:intron | 30.0% | |
CTTCAAACTACAAGATAAGA+AGG | - | chr4.2:7002562-7002581 | MS.gene72190:intron | 30.0% | |
CTTCTTATCTTGTAGTTTGA+AGG | + | chr4.2:7002564-7002583 | None:intergenic | 30.0% | |
CTTGAATCATACCAAAATGT+GGG | + | chr4.2:7002874-7002893 | None:intergenic | 30.0% | |
GAAATTAATCTACAAACCAG+AGG | + | chr4.2:7000161-7000180 | None:intergenic | 30.0% | |
GCATACATATTTCAGTTCAA+AGG | - | chr4.2:7000961-7000980 | MS.gene72190:intron | 30.0% | |
GTAAAATATTGTCAGTTGAG+TGG | - | chr4.2:7002748-7002767 | MS.gene72190:intron | 30.0% | |
GTATATTCAACACAATCTAC+AGG | - | chr4.2:7001110-7001129 | MS.gene72190:intron | 30.0% | |
GTTTAGAAGTTGAAAGTTGA+CGG | - | chr4.2:7001948-7001967 | MS.gene72190:CDS | 30.0% | |
TAATTGAGATGAACTTTCCA+GGG | - | chr4.2:7000466-7000485 | MS.gene72190:intron | 30.0% | |
TCAAAGCTTATTCTACTATG+TGG | + | chr4.2:7003325-7003344 | None:intergenic | 30.0% | |
TCAGTAATTATAAGGGAATG+AGG | + | chr4.2:6998504-6998523 | None:intergenic | 30.0% | |
TCCACATTCATTGTAGTATT+TGG | - | chr4.2:7003392-7003411 | MS.gene72190:intron | 30.0% | |
TCTAATATTCCCAAAATGCT+TGG | + | chr4.2:7001624-7001643 | None:intergenic | 30.0% | |
TCTTGAATCATACCAAAATG+TGG | + | chr4.2:7002875-7002894 | None:intergenic | 30.0% | |
TGAAACAAAATTGGCTGATA+TGG | + | chr4.2:7000256-7000275 | None:intergenic | 30.0% | |
TGTATGCAATTAAGGATGAA+GGG | - | chr4.2:7001531-7001550 | MS.gene72190:intron | 30.0% | |
TTAATTGAGATGAACTTTCC+AGG | - | chr4.2:7000465-7000484 | MS.gene72190:intron | 30.0% | |
TTATTGCAACTTCAGATACT+CGG | - | chr4.2:7002781-7002800 | MS.gene72190:intron | 30.0% | |
TTGAATCATACCAAAATGTG+GGG | + | chr4.2:7002873-7002892 | None:intergenic | 30.0% | |
TTGTAGTTTGAAGGAAAATG+TGG | + | chr4.2:7002555-7002574 | None:intergenic | 30.0% | |
TTTATATTCTACCCGCAATT+AGG | + | chr4.2:7003223-7003242 | None:intergenic | 30.0% | |
! | AAACTTGAGTTTTCAATGTG+GGG | + | chr4.2:7000688-7000707 | None:intergenic | 30.0% |
! | AAACTTTTGTATCATGGAGT+TGG | + | chr4.2:7002320-7002339 | None:intergenic | 30.0% |
! | ACTCCATGATACAAAAGTTT+TGG | - | chr4.2:7002320-7002339 | MS.gene72190:intron | 30.0% |
! | ATCCCAAAACTTTTGTATCA+TGG | + | chr4.2:7002326-7002345 | None:intergenic | 30.0% |
! | ATTTTCTCAGGAACATGAAT+TGG | - | chr4.2:7003427-7003446 | MS.gene72190:intron | 30.0% |
! | CCAATTAACAAAAGTGGTTT+TGG | + | chr4.2:7002186-7002205 | None:intergenic | 30.0% |
! | CTATGAATGGTAACGTATAA+TGG | + | chr4.2:7002630-7002649 | None:intergenic | 30.0% |
! | CTCCATGATACAAAAGTTTT+GGG | - | chr4.2:7002321-7002340 | MS.gene72190:intron | 30.0% |
! | CTTTCTGTCATATTTTTCCT+GGG | - | chr4.2:7002212-7002231 | MS.gene72190:CDS | 30.0% |
! | TTTTCTTGAAATCCAGCATT+CGG | - | chr4.2:7001717-7001736 | MS.gene72190:intron | 30.0% |
!! | AAAAGATCTTTTAGGAAGTG+AGG | - | chr4.2:7001987-7002006 | MS.gene72190:CDS | 30.0% |
!! | AACAACAGAAGTACCAATTA+AGG | + | chr4.2:7001447-7001466 | None:intergenic | 30.0% |
!! | ACAACAGAAGTACCAATTAA+GGG | + | chr4.2:7001446-7001465 | None:intergenic | 30.0% |
!! | ACTTAAAGCTTGCTGTTAAT+TGG | - | chr4.2:7003354-7003373 | MS.gene72190:intron | 30.0% |
!! | ATGTTAAGTTGGTTATGTAC+AGG | - | chr4.2:7000275-7000294 | MS.gene72190:intron | 30.0% |
!! | CCAAAACCACTTTTGTTAAT+TGG | - | chr4.2:7002183-7002202 | MS.gene72190:CDS | 30.0% |
!! | CTTAAAGCTTGCTGTTAATT+GGG | - | chr4.2:7003355-7003374 | MS.gene72190:intron | 30.0% |
!! | TTACTTGATTTTAAGAGGGT+TGG | - | chr4.2:6998556-6998575 | MS.gene72190:intron | 30.0% |
!!! | CAACTAAGCCTTGATTTTTT+AGG | + | chr4.2:7001769-7001788 | None:intergenic | 30.0% |
!!! | CATCAGAAGTGTTTTAAGTT+AGG | - | chr4.2:7000220-7000239 | MS.gene72190:intron | 30.0% |
!!! | GATACAAAAGTTTTGGGATT+CGG | - | chr4.2:7002327-7002346 | MS.gene72190:intron | 30.0% |
AAAAATCAAGGCTTAGTTGC+TGG | - | chr4.2:7001770-7001789 | MS.gene72190:intron | 35.0% | |
AAAATTCTTGCATCTTCCTG+TGG | - | chr4.2:7001206-7001225 | MS.gene72190:intron | 35.0% | |
AAATCAGCCTAGTATTCAGA+AGG | + | chr4.2:6999962-6999981 | None:intergenic | 35.0% | |
AATGTGCAACTTCCTAAGAT+AGG | - | chr4.2:7002062-7002081 | MS.gene72190:intron | 35.0% | |
AATGTTGACAAAACAAGTGC+AGG | + | chr4.2:6999398-6999417 | None:intergenic | 35.0% | |
ACGAAGAAGAAGATTCACAA+AGG | - | chr4.2:7002371-7002390 | MS.gene72190:intron | 35.0% | |
AGAAGAAGATTCACAAAGGT+TGG | - | chr4.2:7002375-7002394 | MS.gene72190:intron | 35.0% | |
AGGGAAATTCAGACATTTAC+CGG | - | chr4.2:6999991-7000010 | MS.gene72190:intron | 35.0% | |
ATAAACACTTGGCTATGTCA+AGG | + | chr4.2:7000045-7000064 | None:intergenic | 35.0% | |
ATATTACCTCTATCAACCAC+AGG | + | chr4.2:7001225-7001244 | None:intergenic | 35.0% | |
ATCATTCATTGAGACTCTTC+GGG | - | chr4.2:7000307-7000326 | MS.gene72190:intron | 35.0% | |
ATCTTCAACTCTTGTTGAGA+CGG | - | chr4.2:7001021-7001040 | MS.gene72190:intron | 35.0% | |
ATGTATCTTGCATGTATTGC+TGG | - | chr4.2:7003247-7003266 | MS.gene72190:intron | 35.0% | |
ATTTACATTACATGCTGGTC+AGG | - | chr4.2:6999271-6999290 | MS.gene72190:intron | 35.0% | |
CAGATAAAAGGGAGAAGAAA+AGG | + | chr4.2:7001088-7001107 | None:intergenic | 35.0% | |
CAGTTTGCATTAGTAAAAGG+AGG | + | chr4.2:7002934-7002953 | None:intergenic | 35.0% | |
CATCATTCATTGAGACTCTT+CGG | - | chr4.2:7000306-7000325 | MS.gene72190:intron | 35.0% | |
CATGAATTGGTGAATTCTGT+AGG | - | chr4.2:7003440-7003459 | MS.gene72190:intron | 35.0% | |
CATTCCTGAGAATTCAAAGT+AGG | - | chr4.2:7000361-7000380 | MS.gene72190:intron | 35.0% | |
CCAAGAAGAAACAACACTAT+CGG | + | chr4.2:6999436-6999455 | None:intergenic | 35.0% | |
CCCAAATACTACAATGAATG+TGG | + | chr4.2:7003396-7003415 | None:intergenic | 35.0% | |
CTACAATGAATGTGGATCAT+AGG | + | chr4.2:7003388-7003407 | None:intergenic | 35.0% | |
GAAAATAAGGATTCAAGAGC+TGG | + | chr4.2:7001885-7001904 | None:intergenic | 35.0% | |
GAATAGCAAAACCTAATTGC+GGG | - | chr4.2:7003209-7003228 | MS.gene72190:intron | 35.0% | |
GACCAGTTTGCATTAGTAAA+AGG | + | chr4.2:7002937-7002956 | None:intergenic | 35.0% | |
GATATTAATCACATCAACCG+TGG | + | chr4.2:7001328-7001347 | None:intergenic | 35.0% | |
GCATGGCAAAATAATGTAAC+AGG | + | chr4.2:6999940-6999959 | None:intergenic | 35.0% | |
GGAATAGCAAAACCTAATTG+CGG | - | chr4.2:7003208-7003227 | MS.gene72190:intron | 35.0% | |
GTAACGTATAATGGTTGACA+TGG | + | chr4.2:7002621-7002640 | None:intergenic | 35.0% | |
GTAATATACTGGCATGAGAT+GGG | - | chr4.2:7001238-7001257 | MS.gene72190:intron | 35.0% | |
GTTCAAAGGATATCTTGATG+CGG | - | chr4.2:7000975-7000994 | MS.gene72190:CDS | 35.0% | |
GTTGTCAAAACTGTATCTGT+TGG | + | chr4.2:7000506-7000525 | None:intergenic | 35.0% | |
TAACTCACACGAAGACATTT+AGG | + | chr4.2:6998667-6998686 | None:intergenic | 35.0% | |
TCCTTGAAAATGATTTCCGA+GGG | - | chr4.2:7002482-7002501 | MS.gene72190:CDS | 35.0% | |
TGAACAACATTGCAACATGT+AGG | + | chr4.2:6999890-6999909 | None:intergenic | 35.0% | |
TGAATTCTCAGGAATGATTG+TGG | + | chr4.2:7000357-7000376 | None:intergenic | 35.0% | |
TGTATCTTGCATGTATTGCT+GGG | - | chr4.2:7003248-7003267 | MS.gene72190:intron | 35.0% | |
TGTATTTGCGATAAGATCCT+CGG | + | chr4.2:6999206-6999225 | None:intergenic | 35.0% | |
TGTCATCCCGAAAAGATTAA+TGG | - | chr4.2:6998582-6998601 | MS.gene72190:intron | 35.0% | |
TTCAAAGGATATCTTGATGC+GGG | - | chr4.2:7000976-7000995 | MS.gene72190:CDS | 35.0% | |
TTCATAGCAAGACTTACGTA+AGG | + | chr4.2:7000598-7000617 | None:intergenic | 35.0% | |
TTCCTTGAAAATGATTTCCG+AGG | - | chr4.2:7002481-7002500 | MS.gene72190:CDS | 35.0% | |
TTCTTCTTGGAATTGGATCA+GGG | - | chr4.2:6999446-6999465 | MS.gene72190:CDS | 35.0% | |
TTGTCATAACCTTGGAACAA+GGG | + | chr4.2:6999798-6999817 | None:intergenic | 35.0% | |
TTTCTTCTTGGAATTGGATC+AGG | - | chr4.2:6999445-6999464 | MS.gene72190:CDS | 35.0% | |
! | AAAGGTGACAACATTTTTCC+AGG | + | chr4.2:7001584-7001603 | None:intergenic | 35.0% |
! | AACAGAAGCAAGTTTAGGTT+TGG | - | chr4.2:7003506-7003525 | MS.gene72190:intron | 35.0% |
! | AACTTGAGTTTTCAATGTGG+GGG | + | chr4.2:7000687-7000706 | None:intergenic | 35.0% |
! | AGAACACGATCAAGTTGTAT+TGG | - | chr4.2:7002981-7003000 | MS.gene72190:intron | 35.0% |
! | AGTTGCGCCATTAATCTTTT+CGG | + | chr4.2:6998592-6998611 | None:intergenic | 35.0% |
! | CTCCTTTTACTAATGCAAAC+TGG | - | chr4.2:7002932-7002951 | MS.gene72190:intron | 35.0% |
! | GCTTTCTGTCATATTTTTCC+TGG | - | chr4.2:7002211-7002230 | MS.gene72190:CDS | 35.0% |
! | TAGTTTTCACTAACAGGGTT+TGG | - | chr4.2:7002118-7002137 | MS.gene72190:intron | 35.0% |
! | TTCTTCGTCATTTGAAGTCA+AGG | + | chr4.2:7002359-7002378 | None:intergenic | 35.0% |
!! | ACAGCAAGCTTTAAGTTTAG+AGG | + | chr4.2:7003350-7003369 | None:intergenic | 35.0% |
!! | AGGCTGATTTATGTTTTGCA+GGG | - | chr4.2:6999972-6999991 | MS.gene72190:intron | 35.0% |
!! | CTTTGCATTCTATTTCTGAC+CGG | - | chr4.2:6999027-6999046 | MS.gene72190:intron | 35.0% |
!! | GCATATCAGTTGATTTTCTC+AGG | - | chr4.2:7003415-7003434 | MS.gene72190:intron | 35.0% |
!! | GGTTGATAGAGGTAATATAC+TGG | - | chr4.2:7001227-7001246 | MS.gene72190:intron | 35.0% |
!! | GTATCGATTATTGCACATTC+TGG | + | chr4.2:7001150-7001169 | None:intergenic | 35.0% |
!! | GTGTTGTTTCTTCTTGGAAT+TGG | - | chr4.2:6999439-6999458 | MS.gene72190:CDS | 35.0% |
!! | TAGGCTGATTTATGTTTTGC+AGG | - | chr4.2:6999971-6999990 | MS.gene72190:intron | 35.0% |
!! | TGAAGGTATTGACAAACACT+GGG | - | chr4.2:7000126-7000145 | MS.gene72190:intron | 35.0% |
!! | TTCATAGACCGTTGTTGTTT+CGG | + | chr4.2:6999520-6999539 | None:intergenic | 35.0% |
!! | TTGAAGGTATTGACAAACAC+TGG | - | chr4.2:7000125-7000144 | MS.gene72190:intron | 35.0% |
!!! | ACTGGCTATCCTATTTTTTG+TGG | - | chr4.2:6999719-6999738 | MS.gene72190:intron | 35.0% |
!!! | TCTTTTTTAACTCCGAATGC+TGG | + | chr4.2:7001732-7001751 | None:intergenic | 35.0% |
AAAATGTGGGGCAGGTTATT+GGG | + | chr4.2:7002861-7002880 | None:intergenic | 40.0% | |
AACAAAACCACATACCTGAC+TGG | + | chr4.2:7001373-7001392 | None:intergenic | 40.0% | |
AATATGCTGAGTCAGAAGCT+TGG | - | chr4.2:7003529-7003548 | MS.gene72190:CDS | 40.0% | |
AATGAGGAAGAGAATGTACG+TGG | + | chr4.2:6998488-6998507 | None:intergenic | 40.0% | |
ACTTACGTAAGGATACCACA+AGG | + | chr4.2:7000587-7000606 | None:intergenic | 40.0% | |
ACTTCCATCATTCAGAGAGT+TGG | - | chr4.2:7002822-7002841 | MS.gene72190:intron | 40.0% | |
AGATTGCACTTAGACTACTC+AGG | - | chr4.2:7003468-7003487 | MS.gene72190:intron | 40.0% | |
AGGAGTGGCAATTGTAGAAA+AGG | + | chr4.2:7000663-7000682 | None:intergenic | 40.0% | |
ATAGGATGAAATGGTCTAGG+AGG | + | chr4.2:6998454-6998473 | None:intergenic | 40.0% | |
ATATGATGCCATTGCTCGTA+TGG | - | chr4.2:7000063-7000082 | MS.gene72190:intron | 40.0% | |
ATATGCTGAGTCAGAAGCTT+GGG | - | chr4.2:7003530-7003549 | MS.gene72190:CDS | 40.0% | |
ATGTGAAGCGCATCAACAAT+TGG | + | chr4.2:7001174-7001193 | None:intergenic | 40.0% | |
ATTCAGACATTTACCGGTAG+TGG | - | chr4.2:6999997-7000016 | MS.gene72190:intron | 40.0% | |
CAAGTTATACCTTGTCTGTG+AGG | + | chr4.2:6999617-6999636 | None:intergenic | 40.0% | |
CTCAACAAGAGTTGAAGATG+CGG | + | chr4.2:7001020-7001039 | None:intergenic | 40.0% | |
CTTGTCATAACCTTGGAACA+AGG | + | chr4.2:6999799-6999818 | None:intergenic | 40.0% | |
CTTGTTCCAAGGTTATGACA+AGG | - | chr4.2:6999797-6999816 | MS.gene72190:intron | 40.0% | |
GAAATCACTGCGACTTTCAA+AGG | - | chr4.2:6999482-6999501 | MS.gene72190:CDS | 40.0% | |
GCGCTTCACATAATGCATAA+TGG | - | chr4.2:7001183-7001202 | MS.gene72190:intron | 40.0% | |
GCTTGACGCATTATAAGGAA+TGG | + | chr4.2:7002525-7002544 | None:intergenic | 40.0% | |
GGAAGATGGGTGAATGTAAA+AGG | + | chr4.2:7001602-7001621 | None:intergenic | 40.0% | |
GGTAATATACTGGCATGAGA+TGG | - | chr4.2:7001237-7001256 | MS.gene72190:intron | 40.0% | |
GTATCTTGCATGTATTGCTG+GGG | - | chr4.2:7003249-7003268 | MS.gene72190:intron | 40.0% | |
TAAAAGGGAGAAGAAAAGGC+AGG | + | chr4.2:7001084-7001103 | None:intergenic | 40.0% | |
TAATATCACTCATGCTGCTG+TGG | - | chr4.2:7001341-7001360 | MS.gene72190:intron | 40.0% | |
TACGGAACAGAAGCAAGTTT+AGG | - | chr4.2:7003501-7003520 | MS.gene72190:intron | 40.0% | |
TAGGTCTATTAGCGTTCTTC+AGG | - | chr4.2:7003601-7003620 | MS.gene72190:CDS | 40.0% | |
TCTTCTTGGAATTGGATCAG+GGG | - | chr4.2:6999447-6999466 | MS.gene72190:CDS | 40.0% | |
TGGATTCCTTGTCATAACCT+TGG | + | chr4.2:6999806-6999825 | None:intergenic | 40.0% | |
TGTCATAACCTTGGAACAAG+GGG | + | chr4.2:6999797-6999816 | None:intergenic | 40.0% | |
TTCGCATGTTAACGACGAAT+AGG | - | chr4.2:7002146-7002165 | MS.gene72190:CDS | 40.0% | |
TTGAAAATGATTTCCGAGGG+AGG | - | chr4.2:7002485-7002504 | MS.gene72190:CDS | 40.0% | |
! | AGTGAGGTCCGATTTTCAAT+AGG | - | chr4.2:7002003-7002022 | MS.gene72190:intron | 40.0% |
! | ATATGTGCACTGACGTTTCT+AGG | - | chr4.2:7002398-7002417 | MS.gene72190:CDS | 40.0% |
! | GCACAAAAAGCATGCATAAC+TGG | - | chr4.2:6999701-6999720 | MS.gene72190:CDS | 40.0% |
! | GTTGCGCCATTAATCTTTTC+GGG | + | chr4.2:6998591-6998610 | None:intergenic | 40.0% |
! | TCCCTCGGAAATCATTTTCA+AGG | + | chr4.2:7002486-7002505 | None:intergenic | 40.0% |
! | TGTTGAAGCACTCCAAAAGA+TGG | - | chr4.2:6999852-6999871 | MS.gene72190:intron | 40.0% |
!! | AGCTTGCTGTTAATTGGGAA+AGG | - | chr4.2:7003360-7003379 | MS.gene72190:intron | 40.0% |
!! | CATTTACCGGTAGTGGAAAA+CGG | - | chr4.2:7000004-7000023 | MS.gene72190:intron | 40.0% |
!! | CCGATAGTGTTGTTTCTTCT+TGG | - | chr4.2:6999433-6999452 | MS.gene72190:CDS | 40.0% |
!! | GAAGGTATTGACAAACACTG+GGG | - | chr4.2:7000127-7000146 | MS.gene72190:intron | 40.0% |
!! | GCTTGCTGTTAATTGGGAAA+GGG | - | chr4.2:7003361-7003380 | MS.gene72190:intron | 40.0% |
!! | TCATAGACCGTTGTTGTTTC+GGG | + | chr4.2:6999519-6999538 | None:intergenic | 40.0% |
!!! | CAGCATTTTGGTCTTAAACC+TGG | - | chr4.2:7001563-7001582 | MS.gene72190:intron | 40.0% |
AAATGTGGGGCAGGTTATTG+GGG | + | chr4.2:7002860-7002879 | None:intergenic | 45.0% | |
AACTTCAGATACTCGGAGCT+TGG | - | chr4.2:7002788-7002807 | MS.gene72190:intron | 45.0% | |
AAGAGAATGTACGTGGTGGT+GGG | + | chr4.2:6998481-6998500 | None:intergenic | 45.0% | |
AGCCTAGTATTCAGAAGGCA+TGG | + | chr4.2:6999957-6999976 | None:intergenic | 45.0% | |
AGTTGCACATTGCAAGCAGA+AGG | + | chr4.2:7002053-7002072 | None:intergenic | 45.0% | |
ATCATACCAAAATGTGGGGC+AGG | + | chr4.2:7002869-7002888 | None:intergenic | 45.0% | |
ATCGCCAACTCTCTGAATGA+TGG | + | chr4.2:7002829-7002848 | None:intergenic | 45.0% | |
ATGCCATTGCTCGTATGGAA+AGG | - | chr4.2:7000068-7000087 | MS.gene72190:intron | 45.0% | |
CAAAATGTGGGGCAGGTTAT+TGG | + | chr4.2:7002862-7002881 | None:intergenic | 45.0% | |
CCCAAAATGCTTGGGAAGAT+GGG | + | chr4.2:7001615-7001634 | None:intergenic | 45.0% | |
CGCATAGGATGAAATGGTCT+AGG | + | chr4.2:6998457-6998476 | None:intergenic | 45.0% | |
CTATGAAGCTTGTCGTCGAA+TGG | - | chr4.2:6999533-6999552 | MS.gene72190:intron | 45.0% | |
GAGGATGACGCTGATGATAA+CGG | - | chr4.2:6999095-6999114 | MS.gene72190:intron | 45.0% | |
GATTCCAATGCTTTGCTCTG+TGG | - | chr4.2:6999588-6999607 | MS.gene72190:intron | 45.0% | |
GATTCCACAGAGCAAAGCAT+TGG | + | chr4.2:6999595-6999614 | None:intergenic | 45.0% | |
GGAATGATTGTGGACAACGA+TGG | + | chr4.2:7000347-7000366 | None:intergenic | 45.0% | |
GTAAATGCTTCTCAGTACCC+AGG | + | chr4.2:7002232-7002251 | None:intergenic | 45.0% | |
TACTCAGGAACACGTGGTTA+CGG | - | chr4.2:7003483-7003502 | MS.gene72190:intron | 45.0% | |
TCCAAAAGATGGTGCAAGGT+TGG | - | chr4.2:6999863-6999882 | MS.gene72190:intron | 45.0% | |
TCCCAAAATGCTTGGGAAGA+TGG | + | chr4.2:7001616-7001635 | None:intergenic | 45.0% | |
TCTTCTTCCTTGAGCGAGTA+GGG | + | chr4.2:6998414-6998433 | None:intergenic | 45.0% | |
TGCACGCTTGACGCATTATA+AGG | + | chr4.2:7002530-7002549 | None:intergenic | 45.0% | |
TGCCATGCCTTCTGAATACT+AGG | - | chr4.2:6999952-6999971 | MS.gene72190:intron | 45.0% | |
TGCCATTGCTCGTATGGAAA+GGG | - | chr4.2:7000069-7000088 | MS.gene72190:intron | 45.0% | |
TGGTGAAACTGTAACAACCC+TGG | + | chr4.2:7000486-7000505 | None:intergenic | 45.0% | |
TTAGACTACTCAGGAACACG+TGG | - | chr4.2:7003477-7003496 | MS.gene72190:intron | 45.0% | |
! | ACCAACCTTGCACCATCTTT+TGG | + | chr4.2:6999867-6999886 | None:intergenic | 45.0% |
! | ACCCATCTTCCCAAGCATTT+TGG | - | chr4.2:7001611-7001630 | MS.gene72190:intron | 45.0% |
! | ACTTCTCCGTTTTCCACTAC+CGG | + | chr4.2:7000013-7000032 | None:intergenic | 45.0% |
! | AGATGGCATTGTTGTTGCCA+CGG | - | chr4.2:7001308-7001327 | MS.gene72190:intron | 45.0% |
! | AGGTACTGTGGATCTATTGC+TGG | - | chr4.2:7003058-7003077 | MS.gene72190:intron | 45.0% |
! | CAATAACCTGCCCCACATTT+TGG | - | chr4.2:7002860-7002879 | MS.gene72190:intron | 45.0% |
! | CCCATCTTCCCAAGCATTTT+GGG | - | chr4.2:7001612-7001631 | MS.gene72190:intron | 45.0% |
! | GTCATTTGAAGTCAAGGCCA+TGG | + | chr4.2:7002353-7002372 | None:intergenic | 45.0% |
! | TGAGTTTTCAATGTGGGGGA+AGG | + | chr4.2:7000683-7000702 | None:intergenic | 45.0% |
! | TGCAAGTGCTGCTATTGTGA+CGG | - | chr4.2:7000550-7000569 | MS.gene72190:intron | 45.0% |
! | TGCTTCAACAGCAAGAGTGT+CGG | + | chr4.2:6999842-6999861 | None:intergenic | 45.0% |
!! | ACGGTTGATGACAAACCTTG+TGG | - | chr4.2:7000569-7000588 | MS.gene72190:intron | 45.0% |
!! | CATCTTCCTGTGGTTGATAG+AGG | - | chr4.2:7001216-7001235 | MS.gene72190:intron | 45.0% |
!! | GCTGCAATTGTTGCTGCTTT+AGG | - | chr4.2:7003582-7003601 | MS.gene72190:CDS | 45.0% |
!!! | AAAGTTTTGGGATTCGGCCA+TGG | - | chr4.2:7002333-7002352 | MS.gene72190:intron | 45.0% |
!! | AAAAATTAAAAGATTAAATT+TGG | + | chr4.2:7001833-7001852 | None:intergenic | 5.0% |
!! | AAAATTAAAAGATTAAATTT+GGG | + | chr4.2:7001832-7001851 | None:intergenic | 5.0% |
!!! | TTTTTAAAATAAATATAGTT+GGG | - | chr4.2:6998982-6999001 | MS.gene72190:CDS | 5.0% |
AATTGCAGCTCCAGCTGCAA+CGG | + | chr4.2:7003571-7003590 | None:intergenic | 50.0% | |
ACCTATAAGTCAGAGCTCCG+AGG | - | chr4.2:6999186-6999205 | MS.gene72190:CDS | 50.0% | |
ACTGGCATGAGATGGGAATC+AGG | - | chr4.2:7001245-7001264 | MS.gene72190:intron | 50.0% | |
ATTTCCGAGGGAGGAGAAAC+AGG | - | chr4.2:7002494-7002513 | MS.gene72190:CDS | 50.0% | |
CATTGCTCGTATGGAAAGGG+CGG | - | chr4.2:7000072-7000091 | MS.gene72190:intron | 50.0% | |
CTGTGGAATCCTCACAGACA+AGG | - | chr4.2:6999605-6999624 | MS.gene72190:intron | 50.0% | |
GAAGAGAATGTACGTGGTGG+TGG | + | chr4.2:6998482-6998501 | None:intergenic | 50.0% | |
GACTGTGCCCGAAACAACAA+CGG | - | chr4.2:6999509-6999528 | MS.gene72190:CDS | 50.0% | |
GAGGAAGAGAATGTACGTGG+TGG | + | chr4.2:6998485-6998504 | None:intergenic | 50.0% | |
GCAATTGCAGCAGCTGTTGA+AGG | - | chr4.2:7000109-7000128 | MS.gene72190:intron | 50.0% | |
GCACTCCAAAAGATGGTGCA+AGG | - | chr4.2:6999859-6999878 | MS.gene72190:intron | 50.0% | |
GGATGAAATGGTCTAGGAGG+AGG | + | chr4.2:6998451-6998470 | None:intergenic | 50.0% | |
GTCTTCTTCCTTGAGCGAGT+AGG | + | chr4.2:6998415-6998434 | None:intergenic | 50.0% | |
TCAAACCAGCCGTCTTTGCA+TGG | + | chr4.2:7003038-7003057 | None:intergenic | 50.0% | |
TCCAGCTGCAACGGTATGAT+AGG | + | chr4.2:7003562-7003581 | None:intergenic | 50.0% | |
TGAAGACACCCCTTGTTCCA+AGG | - | chr4.2:6999786-6999805 | MS.gene72190:intron | 50.0% | |
TGCACATTGCAAGCAGAAGG+CGG | + | chr4.2:7002050-7002069 | None:intergenic | 50.0% | |
TTTCAATGTGGGGGAAGGAG+TGG | + | chr4.2:7000678-7000697 | None:intergenic | 50.0% | |
TTTCCGAGGGAGGAGAAACA+GGG | - | chr4.2:7002495-7002514 | MS.gene72190:CDS | 50.0% | |
! | AGAGAATGTACGTGGTGGTG+GGG | + | chr4.2:6998480-6998499 | None:intergenic | 50.0% |
! | GGGTTCAGCAGTCAGCATTT+TGG | - | chr4.2:7001551-7001570 | MS.gene72190:intron | 50.0% |
! | GTGTCGGTAAGGACGAATAC+TGG | + | chr4.2:6999826-6999845 | None:intergenic | 50.0% |
! | TCCTCGGAGCTCTGACTTAT+AGG | + | chr4.2:6999190-6999209 | None:intergenic | 50.0% |
!! | CAACAGCAAGAGTGTCGGTA+AGG | + | chr4.2:6999837-6999856 | None:intergenic | 50.0% |
!! | GGTAGTGGAAAACGGAGAAG+TGG | - | chr4.2:7000012-7000031 | MS.gene72190:intron | 50.0% |
!! | TGCAAAGACGGCTGGTTTGA+AGG | - | chr4.2:7003038-7003057 | MS.gene72190:intron | 50.0% |
AAGGGCGGCTGAGAAAGGAA+AGG | - | chr4.2:7000087-7000106 | MS.gene72190:intron | 55.0% | |
AGATACTCGGAGCTTGGCAG+AGG | - | chr4.2:7002794-7002813 | MS.gene72190:intron | 55.0% | |
AGCCGTCTTTGCATGGTCCA+CGG | + | chr4.2:7003031-7003050 | None:intergenic | 55.0% | |
AGCCGTGGACCATGCAAAGA+CGG | - | chr4.2:7003026-7003045 | MS.gene72190:intron | 55.0% | |
ATGGAAAGGGCGGCTGAGAA+AGG | - | chr4.2:7000082-7000101 | MS.gene72190:intron | 55.0% | |
CAACTAGCCCTACTCGCTCA+AGG | - | chr4.2:6998404-6998423 | MS.gene72190:CDS | 55.0% | |
CGCCCTTTCCATACGAGCAA+TGG | + | chr4.2:7000074-7000093 | None:intergenic | 55.0% | |
GCCTATCATACCGTTGCAGC+TGG | - | chr4.2:7003558-7003577 | MS.gene72190:CDS | 55.0% | |
GTGGGGCGCATAGGATGAAA+TGG | + | chr4.2:6998463-6998482 | None:intergenic | 55.0% | |
TGAGTCAGAAGCTTGGGCCT+CGG | - | chr4.2:7003536-7003555 | MS.gene72190:CDS | 55.0% | |
TGCAACGGTATGATAGGCCG+AGG | + | chr4.2:7003556-7003575 | None:intergenic | 55.0% | |
! | ACCACATACCTGACTGGCTG+TGG | + | chr4.2:7001367-7001386 | None:intergenic | 55.0% |
! | TCTCCCTGTTTCTCCTCCCT+CGG | + | chr4.2:7002501-7002520 | None:intergenic | 55.0% |
!! | CGGCTGGTTTGAAGGTACTG+TGG | - | chr4.2:7003046-7003065 | MS.gene72190:intron | 55.0% |
GCCACAGCCAGTCAGGTATG+TGG | - | chr4.2:7001363-7001382 | MS.gene72190:intron | 60.0% | |
GTGGACCATGCAAAGACGGC+TGG | - | chr4.2:7003030-7003049 | MS.gene72190:intron | 60.0% | |
TAGTGATCTCGCTGCAGCCG+TGG | - | chr4.2:7003011-7003030 | MS.gene72190:intron | 60.0% | |
TGCTGTGGCCACAGCCAGTC+AGG | - | chr4.2:7001356-7001375 | MS.gene72190:intron | 65.0% | |
!! | CACTGGGGAGCATCTGCCTC+TGG | - | chr4.2:7000142-7000161 | MS.gene72190:intron | 65.0% |
!! | TACGTGGTGGTGGGGCGCAT+AGG | + | chr4.2:6998472-6998491 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 6998379 | 7003635 | 6998379 | ID=MS.gene72190 |
chr4.2 | mRNA | 6998379 | 7003635 | 6998379 | ID=MS.gene72190.t1;Parent=MS.gene72190 |
chr4.2 | exon | 7003526 | 7003635 | 7003526 | ID=MS.gene72190.t1.exon1;Parent=MS.gene72190.t1 |
chr4.2 | CDS | 7003526 | 7003635 | 7003526 | ID=cds.MS.gene72190.t1;Parent=MS.gene72190.t1 |
chr4.2 | exon | 7002388 | 7002547 | 7002388 | ID=MS.gene72190.t1.exon2;Parent=MS.gene72190.t1 |
chr4.2 | CDS | 7002388 | 7002547 | 7002388 | ID=cds.MS.gene72190.t1;Parent=MS.gene72190.t1 |
chr4.2 | exon | 7002134 | 7002266 | 7002134 | ID=MS.gene72190.t1.exon3;Parent=MS.gene72190.t1 |
chr4.2 | CDS | 7002134 | 7002266 | 7002134 | ID=cds.MS.gene72190.t1;Parent=MS.gene72190.t1 |
chr4.2 | exon | 7001851 | 7002021 | 7001851 | ID=MS.gene72190.t1.exon4;Parent=MS.gene72190.t1 |
chr4.2 | CDS | 7001851 | 7002021 | 7001851 | ID=cds.MS.gene72190.t1;Parent=MS.gene72190.t1 |
chr4.2 | exon | 7001636 | 7001717 | 7001636 | ID=MS.gene72190.t1.exon5;Parent=MS.gene72190.t1 |
chr4.2 | CDS | 7001636 | 7001717 | 7001636 | ID=cds.MS.gene72190.t1;Parent=MS.gene72190.t1 |
chr4.2 | exon | 7001414 | 7001527 | 7001414 | ID=MS.gene72190.t1.exon6;Parent=MS.gene72190.t1 |
chr4.2 | CDS | 7001414 | 7001527 | 7001414 | ID=cds.MS.gene72190.t1;Parent=MS.gene72190.t1 |
chr4.2 | exon | 7000972 | 7001038 | 7000972 | ID=MS.gene72190.t1.exon7;Parent=MS.gene72190.t1 |
chr4.2 | CDS | 7000972 | 7001038 | 7000972 | ID=cds.MS.gene72190.t1;Parent=MS.gene72190.t1 |
chr4.2 | exon | 7000777 | 7000882 | 7000777 | ID=MS.gene72190.t1.exon8;Parent=MS.gene72190.t1 |
chr4.2 | CDS | 7000777 | 7000882 | 7000777 | ID=cds.MS.gene72190.t1;Parent=MS.gene72190.t1 |
chr4.2 | exon | 7000637 | 7000704 | 7000637 | ID=MS.gene72190.t1.exon9;Parent=MS.gene72190.t1 |
chr4.2 | CDS | 7000637 | 7000704 | 7000637 | ID=cds.MS.gene72190.t1;Parent=MS.gene72190.t1 |
chr4.2 | exon | 6999622 | 6999731 | 6999622 | ID=MS.gene72190.t1.exon10;Parent=MS.gene72190.t1 |
chr4.2 | CDS | 6999622 | 6999731 | 6999622 | ID=cds.MS.gene72190.t1;Parent=MS.gene72190.t1 |
chr4.2 | exon | 6999406 | 6999539 | 6999406 | ID=MS.gene72190.t1.exon11;Parent=MS.gene72190.t1 |
chr4.2 | CDS | 6999406 | 6999539 | 6999406 | ID=cds.MS.gene72190.t1;Parent=MS.gene72190.t1 |
chr4.2 | exon | 6999133 | 6999218 | 6999133 | ID=MS.gene72190.t1.exon12;Parent=MS.gene72190.t1 |
chr4.2 | CDS | 6999133 | 6999218 | 6999133 | ID=cds.MS.gene72190.t1;Parent=MS.gene72190.t1 |
chr4.2 | exon | 6998955 | 6999044 | 6998955 | ID=MS.gene72190.t1.exon13;Parent=MS.gene72190.t1 |
chr4.2 | CDS | 6998955 | 6999044 | 6998955 | ID=cds.MS.gene72190.t1;Parent=MS.gene72190.t1 |
chr4.2 | exon | 6998379 | 6998552 | 6998379 | ID=MS.gene72190.t1.exon14;Parent=MS.gene72190.t1 |
chr4.2 | CDS | 6998379 | 6998552 | 6998379 | ID=cds.MS.gene72190.t1;Parent=MS.gene72190.t1 |
Gene Sequence |
Protein sequence |