Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031204.t1 | XP_013461985.1 | 99.8 | 418 | 1 | 0 | 1 | 418 | 41 | 458 | 4.60E-237 | 830.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031204.t1 | P28011 | 99.8 | 418 | 1 | 0 | 1 | 418 | 1 | 418 | 1.9e-239 | 829.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031204.t1 | A0A072V2E4 | 99.8 | 418 | 1 | 0 | 1 | 418 | 1 | 418 | 3.3e-237 | 830.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene060918 | MS.gene031204 | PPI |
| MS.gene33167 | MS.gene031204 | PPI |
| MS.gene016021 | MS.gene031204 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031204.t1 | MTR_3g110065 | 99.761 | 418 | 1 | 0 | 1 | 418 | 41 | 458 | 0.0 | 856 |
| MS.gene031204.t1 | MTR_3g110065 | 99.761 | 418 | 1 | 0 | 1 | 418 | 1 | 418 | 0.0 | 855 |
| MS.gene031204.t1 | MTR_3g110065 | 99.744 | 391 | 1 | 0 | 1 | 391 | 41 | 431 | 0.0 | 804 |
| MS.gene031204.t1 | MTR_1g013050 | 56.250 | 400 | 173 | 2 | 12 | 410 | 59 | 457 | 1.25e-164 | 471 |
| MS.gene031204.t1 | MTR_4g080140 | 50.877 | 399 | 194 | 1 | 16 | 414 | 25 | 421 | 2.54e-146 | 422 |
| MS.gene031204.t1 | MTR_4g080130 | 48.622 | 399 | 196 | 3 | 16 | 413 | 20 | 410 | 1.36e-134 | 392 |
| MS.gene031204.t1 | MTR_4g014910 | 50.000 | 54 | 27 | 0 | 288 | 341 | 23 | 76 | 5.32e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031204.t1 | AT5G11520 | 81.731 | 416 | 76 | 0 | 1 | 416 | 32 | 447 | 0.0 | 731 |
| MS.gene031204.t1 | AT5G19550 | 83.127 | 403 | 68 | 0 | 15 | 417 | 2 | 404 | 0.0 | 717 |
| MS.gene031204.t1 | AT1G62800 | 72.772 | 404 | 110 | 0 | 15 | 418 | 2 | 405 | 0.0 | 640 |
| MS.gene031204.t1 | AT1G62800 | 72.277 | 404 | 110 | 1 | 15 | 418 | 2 | 403 | 0.0 | 632 |
| MS.gene031204.t1 | AT1G62800 | 70.710 | 338 | 99 | 0 | 15 | 352 | 2 | 339 | 0.0 | 525 |
| MS.gene031204.t1 | AT4G31990 | 54.545 | 396 | 178 | 2 | 16 | 410 | 51 | 445 | 2.87e-161 | 462 |
| MS.gene031204.t1 | AT4G31990 | 54.545 | 396 | 178 | 2 | 16 | 410 | 51 | 445 | 2.87e-161 | 462 |
| MS.gene031204.t1 | AT4G31990 | 54.545 | 396 | 178 | 2 | 16 | 410 | 46 | 440 | 9.15e-161 | 460 |
| MS.gene031204.t1 | AT4G31990 | 54.545 | 396 | 178 | 2 | 16 | 410 | 51 | 445 | 1.03e-160 | 461 |
| MS.gene031204.t1 | AT2G30970 | 52.174 | 391 | 185 | 1 | 24 | 414 | 39 | 427 | 8.00e-148 | 427 |
| MS.gene031204.t1 | AT2G30970 | 52.174 | 391 | 185 | 1 | 24 | 414 | 39 | 427 | 8.00e-148 | 427 |
Find 0 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGCATAATAATTTAAAAAT+TGG | - | 21207:70622-70641 | MS.gene031204:intron | 10.0% |
| !! | TTAGTTAAAAAAATATAAAG+GGG | + | 21207:71720-71739 | None:intergenic | 10.0% |
| !!! | AAGAATTTATTTTGTTATTA+AGG | - | 21207:73763-73782 | MS.gene031204:intron | 10.0% |
| !!! | AATTTTTTTTTTTTTTTTGG+TGG | + | 21207:71520-71539 | None:intergenic | 10.0% |
| !!! | ATTTTTAAATTATTATGCAT+TGG | + | 21207:70622-70641 | None:intergenic | 10.0% |
| !!! | ATTAAATGGAGATAATTTTA+TGG | - | 21207:72629-72648 | MS.gene031204:intron | 15.0% |
| !!! | TTAAATGGAGATAATTTTAT+GGG | - | 21207:72630-72649 | MS.gene031204:intron | 15.0% |
| !! | AAATGAATGATTACACATAA+GGG | + | 21207:74060-74079 | None:intergenic | 20.0% |
| !! | AATATCACAAATCTTATGTT+AGG | - | 21207:70904-70923 | MS.gene031204:intron | 20.0% |
| !! | CATAATTGGATTTCATTTAA+TGG | - | 21207:72015-72034 | MS.gene031204:CDS | 20.0% |
| !! | TAAATGAATGATTACACATA+AGG | + | 21207:74061-74080 | None:intergenic | 20.0% |
| !! | TACATACTTTCAAAAATCTT+TGG | + | 21207:73885-73904 | None:intergenic | 20.0% |
| !! | TCAATACTCAATAACATAAT+TGG | - | 21207:72001-72020 | MS.gene031204:CDS | 20.0% |
| !! | TTATTAACAGCAAAAGAAAT+TGG | + | 21207:73628-73647 | None:intergenic | 20.0% |
| !! | TTCAATAAAAGAATATGCAT+TGG | + | 21207:72419-72438 | None:intergenic | 20.0% |
| !!! | AATCATCAGTAACAAAATTT+TGG | + | 21207:70395-70414 | None:intergenic | 20.0% |
| !!! | AGGTTAGAATCTTATTTATT+TGG | - | 21207:70525-70544 | MS.gene031204:intron | 20.0% |
| !!! | ATTTATTTTGTTATTAAGGC+TGG | - | 21207:73767-73786 | MS.gene031204:intron | 20.0% |
| !!! | GGTTAGAATCTTATTTATTT+GGG | - | 21207:70526-70545 | MS.gene031204:intron | 20.0% |
| !!! | GTTTTCTCATAAACTATTTT+GGG | - | 21207:70809-70828 | MS.gene031204:intron | 20.0% |
| !!! | TAATCATCTTTTGCATAATT+TGG | - | 21207:70969-70988 | MS.gene031204:intron | 20.0% |
| !!! | TGTTTTCTCATAAACTATTT+TGG | - | 21207:70808-70827 | MS.gene031204:intron | 20.0% |
| !!! | TTTTCTCATAAACTATTTTG+GGG | - | 21207:70810-70829 | MS.gene031204:intron | 20.0% |
| ! | AAAAGATGATTATGCAGTAT+AGG | + | 21207:70961-70980 | None:intergenic | 25.0% |
| ! | AAGATTCAAGAGATTAGAAA+TGG | + | 21207:72326-72345 | None:intergenic | 25.0% |
| ! | ACTCTTTCTTTACTATCAAA+TGG | + | 21207:70782-70801 | None:intergenic | 25.0% |
| ! | AGGGAAAAAATCATATTGAA+TGG | + | 21207:72697-72716 | None:intergenic | 25.0% |
| ! | AGTTATGCATAATTTATGCA+AGG | - | 21207:71483-71502 | MS.gene031204:intron | 25.0% |
| ! | ATTGTAGAAAAGGAAAATCA+GGG | + | 21207:72832-72851 | None:intergenic | 25.0% |
| ! | CAACTCAAATAAATGTTTCA+TGG | + | 21207:73332-73351 | None:intergenic | 25.0% |
| ! | GGGAAAAAATCATATTGAAT+GGG | + | 21207:72696-72715 | None:intergenic | 25.0% |
| ! | TAATATTGCTGTATATCGTT+GGG | - | 21207:71737-71756 | MS.gene031204:intron | 25.0% |
| ! | TATTGATCATGATGCATATT+GGG | + | 21207:71987-72006 | None:intergenic | 25.0% |
| ! | TATTGTAGAAAAGGAAAATC+AGG | + | 21207:72833-72852 | None:intergenic | 25.0% |
| ! | TGACTTGATTAAGAGAATAA+TGG | + | 21207:73697-73716 | None:intergenic | 25.0% |
| ! | TTGATACAAATGCGAAAATA+AGG | + | 21207:71953-71972 | None:intergenic | 25.0% |
| !! | AAAAGAAAGTATAGTGAATC+AGG | + | 21207:71208-71227 | None:intergenic | 25.0% |
| !! | AAGCATTTCAAAGCATTAAA+TGG | - | 21207:72615-72634 | MS.gene031204:intron | 25.0% |
| !! | AATCTTATTTATTTGGGATG+TGG | - | 21207:70532-70551 | MS.gene031204:intron | 25.0% |
| !! | TGAAATATATAGGCATTGTT+TGG | - | 21207:70701-70720 | MS.gene031204:CDS | 25.0% |
| !! | TTTTTCTACATAAAGAAGCT+TGG | - | 21207:72776-72795 | MS.gene031204:intron | 25.0% |
| !!! | ACATCTATTTTTGTTCAACA+GGG | - | 21207:72454-72473 | MS.gene031204:intron | 25.0% |
| !!! | GTCTTCATTCTGAAATATAT+AGG | - | 21207:70691-70710 | MS.gene031204:CDS | 25.0% |
| !!! | GTTGCATTCTTTTTAGTTTA+AGG | - | 21207:73941-73960 | MS.gene031204:intron | 25.0% |
| AAAGTATGTACTGTTTGATG+TGG | - | 21207:73895-73914 | MS.gene031204:intron | 30.0% | |
| AAGAATATGCATTGGAGATA+TGG | + | 21207:72411-72430 | None:intergenic | 30.0% | |
| ACATGATTCAAATCATAAGC+AGG | + | 21207:72717-72736 | None:intergenic | 30.0% | |
| AGTCACATTATCAAGCAAAT+TGG | - | 21207:73395-73414 | MS.gene031204:intron | 30.0% | |
| ATAAAGGGGATAGAAAGTTA+AGG | + | 21207:71706-71725 | None:intergenic | 30.0% | |
| ATAAGATTCTAACCTCAGTT+CGG | + | 21207:70520-70539 | None:intergenic | 30.0% | |
| ATATATACCTGACATCTGAT+GGG | - | 21207:73477-73496 | MS.gene031204:intron | 30.0% | |
| ATCTTAATGAGATGCGAAAT+TGG | + | 21207:70147-70166 | None:intergenic | 30.0% | |
| ATTGAATGGGATGAAATACA+AGG | + | 21207:72683-72702 | None:intergenic | 30.0% | |
| ATTGGAATGTTTACTTTCAC+AGG | - | 21207:73413-73432 | MS.gene031204:intron | 30.0% | |
| CATGATTCAAATCATAAGCA+GGG | + | 21207:72716-72735 | None:intergenic | 30.0% | |
| CTAACATGTCATTCAATAGT+TGG | + | 21207:71183-71202 | None:intergenic | 30.0% | |
| CTAATATTGCTGTATATCGT+TGG | - | 21207:71736-71755 | MS.gene031204:intron | 30.0% | |
| CTGTTGAACAAAAATAGATG+TGG | + | 21207:72455-72474 | None:intergenic | 30.0% | |
| GAAATATATATCCATGCTGT+AGG | + | 21207:74031-74050 | None:intergenic | 30.0% | |
| GATTGAATTTCAAAGCGATA+CGG | - | 21207:70265-70284 | MS.gene031204:intron | 30.0% | |
| GTCATTGAAAATGCATGTTA+AGG | - | 21207:70991-71010 | MS.gene031204:intron | 30.0% | |
| TAAGGAATGATAGATCGATA+AGG | - | 21207:71009-71028 | MS.gene031204:intron | 30.0% | |
| TATTTCTCCTGCAATTGAAT+AGG | - | 21207:73356-73375 | MS.gene031204:intron | 30.0% | |
| TGATAAAGAACTGTACAGAA+AGG | + | 21207:73205-73224 | None:intergenic | 30.0% | |
| TGTGTCTGTGTTTGAAAAAT+AGG | - | 21207:70433-70452 | MS.gene031204:intron | 30.0% | |
| TTCAAGAGATTAGAAATGGT+TGG | + | 21207:72322-72341 | None:intergenic | 30.0% | |
| TTGGAATGTTTACTTTCACA+GGG | - | 21207:73414-73433 | MS.gene031204:intron | 30.0% | |
| ! | AAGGAGTATATTCCAATTGT+TGG | - | 21207:71304-71323 | MS.gene031204:intron | 30.0% |
| ! | AGAATCTTTTGCAATTCCTT+TGG | - | 21207:73174-73193 | MS.gene031204:intron | 30.0% |
| ! | AGGAGTATATTCCAATTGTT+GGG | - | 21207:71305-71324 | MS.gene031204:intron | 30.0% |
| ! | GTAAAGCATCAAAAAGTTGT+TGG | + | 21207:73131-73150 | None:intergenic | 30.0% |
| ! | GTATTGATCATGATGCATAT+TGG | + | 21207:71988-72007 | None:intergenic | 30.0% |
| ! | TCAAAAACACATGTTACTTG+TGG | + | 21207:72802-72821 | None:intergenic | 30.0% |
| ! | TCATACAAAGGTTTTCAACT+TGG | - | 21207:71827-71846 | MS.gene031204:intron | 30.0% |
| !! | TGACTTGTGAGTTTTACTAA+TGG | - | 21207:71096-71115 | MS.gene031204:intron | 30.0% |
| !! | TTCTGTTCTGCATTGTTTTT+AGG | - | 21207:71272-71291 | MS.gene031204:CDS | 30.0% |
| !! | TTGAGTGCTAAGCTTATTTT+TGG | - | 21207:71346-71365 | MS.gene031204:intron | 30.0% |
| !!! | CACATCTATTTTTGTTCAAC+AGG | - | 21207:72453-72472 | MS.gene031204:intron | 30.0% |
| !!! | CATGCATTTTTTTATTGTGC+AGG | - | 21207:74106-74125 | MS.gene031204:intron | 30.0% |
| AAAGAAATTGGACAACAGCA+TGG | + | 21207:73616-73635 | None:intergenic | 35.0% | |
| AAGAAAACAAACATACACCG+AGG | + | 21207:70056-70075 | None:intergenic | 35.0% | |
| AAGATCAAGGCAAACAAACA+CGG | + | 21207:71767-71786 | None:intergenic | 35.0% | |
| AATGCATGTCTTGAGTTATG+TGG | + | 21207:74094-74113 | None:intergenic | 35.0% | |
| AGGGCTATGTTCAAAAAAGT+GGG | + | 21207:71573-71592 | None:intergenic | 35.0% | |
| ATAATGCGCTGAAAAGATCA+AGG | + | 21207:71780-71799 | None:intergenic | 35.0% | |
| ATCTGTAGTGATTAGTGATC+TGG | - | 21207:72657-72676 | MS.gene031204:intron | 35.0% | |
| ATGGTACTCTTTAGTCAAGA+TGG | + | 21207:73459-73478 | None:intergenic | 35.0% | |
| ATTGTACAAATCCCTGAAAG+AGG | + | 21207:73058-73077 | None:intergenic | 35.0% | |
| CATATATACCTGACATCTGA+TGG | - | 21207:73476-73495 | MS.gene031204:intron | 35.0% | |
| CATCAGATGTCAGGTATATA+TGG | + | 21207:73478-73497 | None:intergenic | 35.0% | |
| TGAAATGCTTACAATGCTCA+AGG | + | 21207:72605-72624 | None:intergenic | 35.0% | |
| TTATGCAGTATAGGTCTGTT+TGG | + | 21207:70952-70971 | None:intergenic | 35.0% | |
| TTATGTCCACACACAAGTTA+TGG | + | 21207:72269-72288 | None:intergenic | 35.0% | |
| TTCAATTAGTTCAGACGAGT+AGG | - | 21207:73524-73543 | MS.gene031204:intron | 35.0% | |
| TTTCTTTGACAGTGCTTATC+AGG | - | 21207:72206-72225 | MS.gene031204:intron | 35.0% | |
| ! | CATGGATTATCCCAAGAAAT+GGG | + | 21207:72356-72375 | None:intergenic | 35.0% |
| ! | GGTAGAAGTATATTCTTGTG+TGG | + | 21207:72390-72409 | None:intergenic | 35.0% |
| ! | TGATAAGCACTGTCAAAGAA+AGG | + | 21207:72207-72226 | None:intergenic | 35.0% |
| ! | TTTCTACCATAACTTGTGTG+TGG | - | 21207:72260-72279 | MS.gene031204:intron | 35.0% |
| !! | GGGAGCATTTATTGTAGAAA+AGG | + | 21207:72842-72861 | None:intergenic | 35.0% |
| !!! | GCATTTTTTTATTGTGCAGG+AGG | - | 21207:74109-74128 | MS.gene031204:intron | 35.0% |
| !!! | TTTTTTTTGGTGGTGAACCT+CGG | + | 21207:71510-71529 | None:intergenic | 35.0% |
| AACAAACATACACCGAGGAT+AGG | + | 21207:70051-70070 | None:intergenic | 40.0% | |
| AAGAAGTCCTGTAAGGAACA+AGG | + | 21207:72052-72071 | None:intergenic | 40.0% | |
| AAGCCCAATTAAGCTCAACT+TGG | - | 21207:70481-70500 | MS.gene031204:intron | 40.0% | |
| AAGTGGGCAAAAGAACAGTT+AGG | + | 21207:71557-71576 | None:intergenic | 40.0% | |
| AAGTTGAGCTTAATTGGGCT+TGG | + | 21207:70482-70501 | None:intergenic | 40.0% | |
| AATAGGAGGACTTGAGTACA+TGG | + | 21207:72929-72948 | None:intergenic | 40.0% | |
| AATCCTTGAAAGATTCTCGC+AGG | + | 21207:73303-73322 | None:intergenic | 40.0% | |
| ACAATGGATGCACCATGAAT+AGG | + | 21207:72946-72965 | None:intergenic | 40.0% | |
| AGCAAAACAACAGATCCAGA+TGG | + | 21207:72093-72112 | None:intergenic | 40.0% | |
| AGCCCAATTAAGCTCAACTT+GGG | - | 21207:70482-70501 | MS.gene031204:intron | 40.0% | |
| AGTTGCAATGTGCAACATGT+TGG | - | 21207:73654-73673 | MS.gene031204:CDS | 40.0% | |
| ATAATGTGACTCCAATCACC+TGG | + | 21207:73386-73405 | None:intergenic | 40.0% | |
| ATACTTGCCAACACCTACTT+GGG | - | 21207:71800-71819 | MS.gene031204:intron | 40.0% | |
| ATAGGAGGACTTGAGTACAT+GGG | + | 21207:72928-72947 | None:intergenic | 40.0% | |
| ATTAAGCTCAACTTGGGTGT+TGG | - | 21207:70488-70507 | MS.gene031204:intron | 40.0% | |
| CAAAACAACAGATCCAGATG+GGG | + | 21207:72091-72110 | None:intergenic | 40.0% | |
| CAAATCACATGTGTCAGTGT+TGG | - | 21207:70658-70677 | MS.gene031204:intron | 40.0% | |
| CAATATACTTCTGCTTCCCT+TGG | - | 21207:72996-73015 | MS.gene031204:CDS | 40.0% | |
| CAGAGTTATGCGAAGAACAT+GGG | - | 21207:72556-72575 | MS.gene031204:CDS | 40.0% | |
| CAGGGCTATGTTCAAAAAAG+TGG | + | 21207:71574-71593 | None:intergenic | 40.0% | |
| CATAATTTATGCAAGGTCCG+AGG | - | 21207:71490-71509 | MS.gene031204:intron | 40.0% | |
| CATGTTCTTCGCATAACTCT+GGG | + | 21207:72557-72576 | None:intergenic | 40.0% | |
| CCATTTCTTGGGATAATCCA+TGG | - | 21207:72354-72373 | MS.gene031204:CDS | 40.0% | |
| CTTGAAGCTTCCCATTTCTT+GGG | - | 21207:72343-72362 | MS.gene031204:CDS | 40.0% | |
| GCAAAACAACAGATCCAGAT+GGG | + | 21207:72092-72111 | None:intergenic | 40.0% | |
| GCCAACTGAAACTTGTGATT+AGG | - | 21207:72902-72921 | MS.gene031204:intron | 40.0% | |
| GCCTAATCACAAGTTTCAGT+TGG | + | 21207:72906-72925 | None:intergenic | 40.0% | |
| GTTCCAGTTAAGTGTGAACA+TGG | - | 21207:73573-73592 | MS.gene031204:intron | 40.0% | |
| GTTGCAATGTGCAACATGTT+GGG | - | 21207:73655-73674 | MS.gene031204:CDS | 40.0% | |
| GTTTATCTCTACCTACAGCA+TGG | - | 21207:74017-74036 | MS.gene031204:intron | 40.0% | |
| TACTCAAGTCCTCCTATTCA+TGG | - | 21207:72931-72950 | MS.gene031204:intron | 40.0% | |
| TACTTGGGGCAATCATACAA+AGG | - | 21207:71815-71834 | MS.gene031204:intron | 40.0% | |
| TATACTTGCCAACACCTACT+TGG | - | 21207:71799-71818 | MS.gene031204:intron | 40.0% | |
| TATTCATGGTGCATCCATTG+TGG | - | 21207:72945-72964 | MS.gene031204:intron | 40.0% | |
| TCAGCAACAAACAAACGAAC+AGG | + | 21207:72514-72533 | None:intergenic | 40.0% | |
| TCAGGGATTTGTACAATGAC+TGG | - | 21207:73061-73080 | MS.gene031204:intron | 40.0% | |
| TCTTGAAGCTTCCCATTTCT+TGG | - | 21207:72342-72361 | MS.gene031204:CDS | 40.0% | |
| TGATCCAACGCTTGAACAAT+GGG | - | 21207:72143-72162 | MS.gene031204:intron | 40.0% | |
| TGCAATTGAATAGGTACACC+AGG | - | 21207:73365-73384 | MS.gene031204:intron | 40.0% | |
| TGGTGTACCTATTCAATTGC+AGG | + | 21207:73366-73385 | None:intergenic | 40.0% | |
| TGTGTGGACATTATTCACCA+TGG | + | 21207:72374-72393 | None:intergenic | 40.0% | |
| TTCTACAATAAATGCTCCCC+AGG | - | 21207:72843-72862 | MS.gene031204:CDS | 40.0% | |
| TTGATCCAACGCTTGAACAA+TGG | - | 21207:72142-72161 | MS.gene031204:intron | 40.0% | |
| TTGCAATGTGCAACATGTTG+GGG | - | 21207:73656-73675 | MS.gene031204:CDS | 40.0% | |
| TTTGATGCTTTACGTGCTAG+AGG | - | 21207:73138-73157 | MS.gene031204:intron | 40.0% | |
| TTTGTATGATTGCCCCAAGT+AGG | + | 21207:71816-71835 | None:intergenic | 40.0% | |
| ! | ACAAAGGTTTTCAACTTGGC+AGG | - | 21207:71831-71850 | MS.gene031204:intron | 40.0% |
| ! | ACACCCAAGTTGAGCTTAAT+TGG | + | 21207:70488-70507 | None:intergenic | 40.0% |
| ! | CACCCAAGTTGAGCTTAATT+GGG | + | 21207:70487-70506 | None:intergenic | 40.0% |
| ! | CCATGGATTATCCCAAGAAA+TGG | + | 21207:72357-72376 | None:intergenic | 40.0% |
| ! | GTTCGTTTGTTTGTTGCTGA+TGG | - | 21207:72514-72533 | MS.gene031204:CDS | 40.0% |
| !! | GACTATTGAGTTGAAGGCAA+TGG | - | 21207:73083-73102 | MS.gene031204:intron | 40.0% |
| !! | TGACTGGACTATTGAGTTGA+AGG | - | 21207:73077-73096 | MS.gene031204:intron | 40.0% |
| !!! | ACTTGTTTTGCTCCTCTTTC+AGG | - | 21207:73043-73062 | MS.gene031204:intron | 40.0% |
| !!! | AGCTTATTTTTGGTGCAGAC+AGG | - | 21207:71356-71375 | MS.gene031204:intron | 40.0% |
| !!! | CTTGTTTTGCTCCTCTTTCA+GGG | - | 21207:73044-73063 | MS.gene031204:intron | 40.0% |
| !!! | TGTTTTTAGGTCACGCAACA+AGG | - | 21207:71285-71304 | MS.gene031204:CDS | 40.0% |
| AAATCAGCGAGCCCAACAAT+TGG | + | 21207:71319-71338 | None:intergenic | 45.0% | |
| AACAGGGTTACCACTGTTCA+AGG | - | 21207:71605-71624 | MS.gene031204:CDS | 45.0% | |
| AAGTCCTGTAAGGAACAAGG+AGG | + | 21207:72049-72068 | None:intergenic | 45.0% | |
| AATGGCCTGTGATACTTACC+AGG | - | 21207:71114-71133 | MS.gene031204:intron | 45.0% | |
| ACAGGACTTCTTGAGGATCT+TGG | - | 21207:72060-72079 | MS.gene031204:CDS | 45.0% | |
| ACCACTGTTCAAGGCTTATC+TGG | - | 21207:71614-71633 | MS.gene031204:CDS | 45.0% | |
| ACCAGATAAGCCTTGAACAG+TGG | + | 21207:71618-71637 | None:intergenic | 45.0% | |
| ACCCTGTTCTCTTGAATAGC+AGG | + | 21207:71593-71612 | None:intergenic | 45.0% | |
| ACCTTCCTGGTAAGTATCAC+AGG | + | 21207:71122-71141 | None:intergenic | 45.0% | |
| AGTCCTGTAAGGAACAAGGA+GGG | + | 21207:72048-72067 | None:intergenic | 45.0% | |
| ATAACTGAGCTAAGCTCACG+GGG | + | 21207:71469-71488 | None:intergenic | 45.0% | |
| ATATGTCCAAGTCCAGCCAA+GGG | + | 21207:73015-73034 | None:intergenic | 45.0% | |
| ATCTGCATCTAGACTTCCAC+TGG | + | 21207:72485-72504 | None:intergenic | 45.0% | |
| ATGCTTTACGTGCTAGAGGT+TGG | - | 21207:73142-73161 | MS.gene031204:intron | 45.0% | |
| ATGGATGCACCATGAATAGG+AGG | + | 21207:72943-72962 | None:intergenic | 45.0% | |
| CATAACTGAGCTAAGCTCAC+GGG | + | 21207:71470-71489 | None:intergenic | 45.0% | |
| CCAGAGTTATGCGAAGAACA+TGG | - | 21207:72555-72574 | MS.gene031204:CDS | 45.0% | |
| CCATGTTCTTCGCATAACTC+TGG | + | 21207:72558-72577 | None:intergenic | 45.0% | |
| CCCTGCTATTCAAGAGAACA+GGG | - | 21207:71589-71608 | MS.gene031204:CDS | 45.0% | |
| CCCTGTTCTCTTGAATAGCA+GGG | + | 21207:71592-71611 | None:intergenic | 45.0% | |
| CCTCACAACATCCAACACAA+GGG | + | 21207:71149-71168 | None:intergenic | 45.0% | |
| CTCACAACATCCAACACAAG+GGG | + | 21207:71148-71167 | None:intergenic | 45.0% | |
| GAAGACGGAATCAGAAGAAG+CGG | + | 21207:70001-70020 | None:intergenic | 45.0% | |
| GAATAGGTACACCAGGTGAT+TGG | - | 21207:73372-73391 | MS.gene031204:intron | 45.0% | |
| GATCCTCAAGAAGTCCTGTA+AGG | + | 21207:72059-72078 | None:intergenic | 45.0% | |
| GCACCATGTTCACACTTAAC+TGG | + | 21207:73579-73598 | None:intergenic | 45.0% | |
| GCATAACTGAGCTAAGCTCA+CGG | + | 21207:71471-71490 | None:intergenic | 45.0% | |
| GCGAAGAACATGGGTCTTTA+TGG | - | 21207:72565-72584 | MS.gene031204:CDS | 45.0% | |
| GGTCTTTATGGTGAACGTGT+TGG | - | 21207:72577-72596 | MS.gene031204:intron | 45.0% | |
| GTACAGAAAGGACAAGCCAA+AGG | + | 21207:73193-73212 | None:intergenic | 45.0% | |
| GTATTGCATCAGCCAGATGT+GGG | + | 21207:74167-74186 | None:intergenic | 45.0% | |
| GTTCAAGGCTTATCTGGTAC+TGG | - | 21207:71620-71639 | MS.gene031204:CDS | 45.0% | |
| GTTCCTTACAGGACTTCTTG+AGG | - | 21207:72053-72072 | MS.gene031204:CDS | 45.0% | |
| TACTTGCCAACACCTACTTG+GGG | - | 21207:71801-71820 | MS.gene031204:intron | 45.0% | |
| TCACTACCTGTCCTTGAGAA+TGG | + | 21207:72974-72993 | None:intergenic | 45.0% | |
| TCTCCTGCGAGAATCTTTCA+AGG | - | 21207:73297-73316 | MS.gene031204:intron | 45.0% | |
| TGCAATGTGCAACATGTTGG+GGG | - | 21207:73657-73676 | MS.gene031204:CDS | 45.0% | |
| TGTATTGCATCAGCCAGATG+TGG | + | 21207:74168-74187 | None:intergenic | 45.0% | |
| TGTCTTACCCATCAGATGTC+AGG | + | 21207:73487-73506 | None:intergenic | 45.0% | |
| ! | ATTGTGCAGGAGGATTAGCA+TGG | - | 21207:74119-74138 | MS.gene031204:intron | 45.0% |
| ! | CGTTTGTTTGTTGCTGATGG+TGG | - | 21207:72517-72536 | MS.gene031204:CDS | 45.0% |
| ! | GGTAACTGTCGCTTACAACA+AGG | - | 21207:70454-70473 | MS.gene031204:intron | 45.0% |
| ! | GTCAAGATGGAAACTTGCTC+AGG | + | 21207:73446-73465 | None:intergenic | 45.0% |
| !! | GTACTGGTTCGCTAAGAGTT+GGG | - | 21207:71636-71655 | MS.gene031204:CDS | 45.0% |
| !! | TACTGGTTCGCTAAGAGTTG+GGG | - | 21207:71637-71656 | MS.gene031204:CDS | 45.0% |
| !! | ATTAGTTAAAAAAATATAAA+GGG | + | 21207:71721-71740 | None:intergenic | 5.0% |
| !! | TATTAGTTAAAAAAATATAA+AGG | + | 21207:71722-71741 | None:intergenic | 5.0% |
| !!! | AAGAATTTTTTTTTTTTTTT+TGG | + | 21207:71523-71542 | None:intergenic | 5.0% |
| ACACAAGGGGTTTACCTTCC+TGG | + | 21207:71135-71154 | None:intergenic | 50.0% | |
| ACACCGAGGATAGGATCTTC+AGG | + | 21207:70042-70061 | None:intergenic | 50.0% | |
| ACACGAGGGCTTGACTTTCA+AGG | - | 21207:71891-71910 | MS.gene031204:intron | 50.0% | |
| ACGAACGAGATGAGCGAAGA+CGG | + | 21207:70016-70035 | None:intergenic | 50.0% | |
| ACGGAATCAGAAGAAGCGGT+TGG | + | 21207:69997-70016 | None:intergenic | 50.0% | |
| ACTATGCTCCAGCAACACGA+GGG | - | 21207:71877-71896 | MS.gene031204:intron | 50.0% | |
| AGTCAGCGGATGTTTCAAGC+AGG | - | 21207:72872-72891 | MS.gene031204:intron | 50.0% | |
| ATACTTCTGCTTCCCTTGGC+TGG | - | 21207:73000-73019 | MS.gene031204:CDS | 50.0% | |
| CAGCATGGTACGCAAGCTAT+AGG | + | 21207:73601-73620 | None:intergenic | 50.0% | |
| CATATGTCCAAGTCCAGCCA+AGG | + | 21207:73016-73035 | None:intergenic | 50.0% | |
| CCCTTGTGTTGGATGTTGTG+AGG | - | 21207:71146-71165 | MS.gene031204:intron | 50.0% | |
| CTACCTGTCCTTGAGAATGG+CGG | + | 21207:72971-72990 | None:intergenic | 50.0% | |
| CTCCAAAACAGTCCCACATC+TGG | - | 21207:74152-74171 | MS.gene031204:CDS | 50.0% | |
| GCATGTGCACATAACCCTAC+TGG | - | 21207:72117-72136 | MS.gene031204:intron | 50.0% | |
| GCCCTGCTATTCAAGAGAAC+AGG | - | 21207:71588-71607 | MS.gene031204:CDS | 50.0% | |
| GCCTCACAACATCCAACACA+AGG | + | 21207:71150-71169 | None:intergenic | 50.0% | |
| GCCTGTGATACTTACCAGGA+AGG | - | 21207:71118-71137 | MS.gene031204:intron | 50.0% | |
| GCGTTGGATCAACACCAGTA+GGG | + | 21207:72134-72153 | None:intergenic | 50.0% | |
| GCTCCTGAAGATCCTATCCT+CGG | - | 21207:70036-70055 | MS.gene031204:intron | 50.0% | |
| GGAAGGTAAACCCCTTGTGT+TGG | - | 21207:71135-71154 | MS.gene031204:intron | 50.0% | |
| GTCAGCGGATGTTTCAAGCA+GGG | - | 21207:72873-72892 | MS.gene031204:intron | 50.0% | |
| GTCCTGTAAGGAACAAGGAG+GGG | + | 21207:72047-72066 | None:intergenic | 50.0% | |
| TACTATGCTCCAGCAACACG+AGG | - | 21207:71876-71895 | MS.gene031204:intron | 50.0% | |
| TCAGAAGAAGCGGTTGGAGA+AGG | + | 21207:69991-70010 | None:intergenic | 50.0% | |
| TCCTGTAAGGAACAAGGAGG+GGG | + | 21207:72046-72065 | None:intergenic | 50.0% | |
| TGATTGCCCCAAGTAGGTGT+TGG | + | 21207:71810-71829 | None:intergenic | 50.0% | |
| TGCTCCCATTGTTCAAGCGT+TGG | + | 21207:72150-72169 | None:intergenic | 50.0% | |
| ! | AGCCAGATGTGGGACTGTTT+TGG | + | 21207:74157-74176 | None:intergenic | 50.0% |
| ! | AGCGTTGGATCAACACCAGT+AGG | + | 21207:72135-72154 | None:intergenic | 50.0% |
| ! | CGATACGGTTCTGATGCTGA+TGG | - | 21207:70280-70299 | MS.gene031204:intron | 50.0% |
| ! | GTTCAACAGGGTTTTGCCAG+TGG | - | 21207:72466-72485 | MS.gene031204:intron | 50.0% |
| ! | TGTTGGTGCTTACCGAACTG+AGG | - | 21207:70505-70524 | MS.gene031204:intron | 50.0% |
| !! | ACTGGTTCGCTAAGAGTTGG+GGG | - | 21207:71638-71657 | MS.gene031204:CDS | 50.0% |
| !! | GGTACTGGTTCGCTAAGAGT+TGG | - | 21207:71635-71654 | MS.gene031204:CDS | 50.0% |
| !! | TGCTGATGGTGGAGAATTGC+TGG | - | 21207:72528-72547 | MS.gene031204:CDS | 50.0% |
| AAGTCAAGCCCTCGTGTTGC+TGG | + | 21207:71888-71907 | None:intergenic | 55.0% | |
| CATTGTGGCCGCCATTCTCA+AGG | - | 21207:72960-72979 | MS.gene031204:intron | 55.0% | |
| CTTGAGAATGGCGGCCACAA+TGG | + | 21207:72962-72981 | None:intergenic | 55.0% | |
| TCCCCCTCCTTGTTCCTTAC+AGG | - | 21207:72042-72061 | MS.gene031204:CDS | 55.0% | |
| ! | TGCAGGAGGATTAGCATGGC+TGG | - | 21207:74123-74142 | MS.gene031204:CDS | 55.0% |
| !! | ATCCGCTGACTTGCTGACCT+GGG | + | 21207:72863-72882 | None:intergenic | 55.0% |
| !! | GATCTTGGTTCTGCCCCATC+TGG | - | 21207:72075-72094 | MS.gene031204:CDS | 55.0% |
| CTGCTTCCCTTGGCTGGACT+TGG | - | 21207:73006-73025 | MS.gene031204:CDS | 60.0% | |
| TCCCCAGGTCAGCAAGTCAG+CGG | - | 21207:72858-72877 | MS.gene031204:CDS | 60.0% | |
| TGGCCGCCATTCTCAAGGAC+AGG | - | 21207:72965-72984 | MS.gene031204:intron | 60.0% | |
| !! | CATCCGCTGACTTGCTGACC+TGG | + | 21207:72864-72883 | None:intergenic | 60.0% |
| !! | TCCGCTGACTTGCTGACCTG+GGG | + | 21207:72862-72881 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 21207 | gene | 69967 | 74212 | 69967 | ID=MS.gene031204 |
| 21207 | mRNA | 69967 | 74212 | 69967 | ID=MS.gene031204.t1;Parent=MS.gene031204 |
| 21207 | exon | 74120 | 74212 | 74120 | ID=MS.gene031204.t1.exon1;Parent=MS.gene031204.t1 |
| 21207 | CDS | 74120 | 74212 | 74120 | ID=cds.MS.gene031204.t1;Parent=MS.gene031204.t1 |
| 21207 | exon | 73653 | 73724 | 73653 | ID=MS.gene031204.t1.exon2;Parent=MS.gene031204.t1 |
| 21207 | CDS | 73653 | 73724 | 73653 | ID=cds.MS.gene031204.t1;Parent=MS.gene031204.t1 |
| 21207 | exon | 72982 | 73043 | 72982 | ID=MS.gene031204.t1.exon3;Parent=MS.gene031204.t1 |
| 21207 | CDS | 72982 | 73043 | 72982 | ID=cds.MS.gene031204.t1;Parent=MS.gene031204.t1 |
| 21207 | exon | 72802 | 72885 | 72802 | ID=MS.gene031204.t1.exon4;Parent=MS.gene031204.t1 |
| 21207 | CDS | 72802 | 72885 | 72802 | ID=cds.MS.gene031204.t1;Parent=MS.gene031204.t1 |
| 21207 | exon | 72491 | 72590 | 72491 | ID=MS.gene031204.t1.exon5;Parent=MS.gene031204.t1 |
| 21207 | CDS | 72491 | 72590 | 72491 | ID=cds.MS.gene031204.t1;Parent=MS.gene031204.t1 |
| 21207 | exon | 72267 | 72387 | 72267 | ID=MS.gene031204.t1.exon6;Parent=MS.gene031204.t1 |
| 21207 | CDS | 72267 | 72387 | 72267 | ID=cds.MS.gene031204.t1;Parent=MS.gene031204.t1 |
| 21207 | exon | 71952 | 72115 | 71952 | ID=MS.gene031204.t1.exon7;Parent=MS.gene031204.t1 |
| 21207 | CDS | 71952 | 72115 | 71952 | ID=cds.MS.gene031204.t1;Parent=MS.gene031204.t1 |
| 21207 | exon | 71567 | 71704 | 71567 | ID=MS.gene031204.t1.exon8;Parent=MS.gene031204.t1 |
| 21207 | CDS | 71567 | 71704 | 71567 | ID=cds.MS.gene031204.t1;Parent=MS.gene031204.t1 |
| 21207 | exon | 71193 | 71314 | 71193 | ID=MS.gene031204.t1.exon9;Parent=MS.gene031204.t1 |
| 21207 | CDS | 71193 | 71314 | 71193 | ID=cds.MS.gene031204.t1;Parent=MS.gene031204.t1 |
| 21207 | exon | 71020 | 71114 | 71020 | ID=MS.gene031204.t1.exon10;Parent=MS.gene031204.t1 |
| 21207 | CDS | 71020 | 71114 | 71020 | ID=cds.MS.gene031204.t1;Parent=MS.gene031204.t1 |
| 21207 | exon | 70681 | 70801 | 70681 | ID=MS.gene031204.t1.exon11;Parent=MS.gene031204.t1 |
| 21207 | CDS | 70681 | 70801 | 70681 | ID=cds.MS.gene031204.t1;Parent=MS.gene031204.t1 |
| 21207 | exon | 69967 | 70051 | 69967 | ID=MS.gene031204.t1.exon12;Parent=MS.gene031204.t1 |
| 21207 | CDS | 69967 | 70051 | 69967 | ID=cds.MS.gene031204.t1;Parent=MS.gene031204.t1 |
| Gene Sequence |
| Protein sequence |
