AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene031273

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031273.t1 MTR_2g082650 99.160 476 4 0 9 484 66 541 0.0 990
MS.gene031273.t1 MTR_2g082650 99.515 412 2 0 73 484 1 412 0.0 855
MS.gene031273.t1 MTR_4g133570 70.378 476 86 3 9 484 44 464 0.0 654
MS.gene031273.t1 MTR_7g012370 54.957 464 207 2 9 471 62 524 0.0 540
MS.gene031273.t1 MTR_6g013840 53.263 475 220 2 9 482 57 530 0.0 524
MS.gene031273.t1 MTR_7g012370 53.125 384 178 2 9 391 62 444 2.96e-144 421
MS.gene031273.t1 MTR_3g452360 42.828 488 254 6 1 482 60 528 8.14e-135 400
MS.gene031273.t1 MTR_3g452360 48.072 389 189 2 97 482 1 379 1.93e-129 380
MS.gene031273.t1 MTR_2g027740 41.096 438 236 6 46 482 249 665 5.93e-116 356
MS.gene031273.t1 MTR_8g092000 40.865 416 222 5 67 482 187 578 5.23e-114 348
MS.gene031273.t1 MTR_3g107930 39.243 423 240 5 61 483 182 587 6.87e-110 338
MS.gene031273.t1 MTR_7g075840 41.587 416 224 5 67 482 266 662 9.34e-110 340
MS.gene031273.t1 MTR_7g055600 42.118 425 226 6 58 482 28 432 1.69e-109 332
MS.gene031273.t1 MTR_7g057530 42.118 425 226 6 58 482 28 432 1.69e-109 332
MS.gene031273.t1 MTR_2g015550 39.506 405 221 8 81 482 149 532 2.54e-109 334
MS.gene031273.t1 MTR_3g107930 39.243 423 240 5 61 483 259 664 3.34e-109 338
MS.gene031273.t1 MTR_6g016380 40.136 441 232 10 51 482 136 553 8.30e-106 326
MS.gene031273.t1 MTR_4g109890 38.532 436 232 8 52 480 126 532 2.25e-104 322
MS.gene031273.t1 MTR_8g033360 41.361 382 207 5 67 448 233 597 4.24e-101 318
MS.gene031273.t1 MTR_2g461670 36.512 430 251 6 53 482 182 589 9.48e-97 304
MS.gene031273.t1 MTR_7g096160 34.053 417 232 6 69 484 280 654 1.29e-85 276
MS.gene031273.t1 MTR_2g006790 35.309 405 214 9 81 482 149 508 3.65e-85 271
MS.gene031273.t1 MTR_1g070490 31.920 401 228 6 85 482 239 597 2.35e-65 222
MS.gene031273.t1 MTR_7g074680 30.093 432 255 9 64 484 230 625 4.14e-52 186
MS.gene031273.t1 MTR_7g074680 30.093 432 255 9 64 484 210 605 4.30e-52 186
MS.gene031273.t1 MTR_7g074680 30.324 432 254 9 64 484 170 565 4.64e-52 185
MS.gene031273.t1 MTR_7g074680 30.093 432 255 9 64 484 230 625 6.46e-52 186
MS.gene031273.t1 MTR_7g074680 30.324 432 254 9 64 484 250 645 7.55e-52 186
MS.gene031273.t1 MTR_7g074680 31.000 400 236 8 89 484 299 662 1.35e-51 186
MS.gene031273.t1 MTR_4g133942 39.764 254 110 7 235 482 116 332 1.62e-45 162
MS.gene031273.t1 MTR_4g118030 29.255 188 110 6 281 457 145 320 2.39e-23 101
MS.gene031273.t1 MTR_4g081360 61.972 71 11 1 414 484 4 58 6.76e-21 86.3
MS.gene031273.t1 MTR_3g092310 29.064 203 117 7 281 469 140 329 1.33e-20 93.2
MS.gene031273.t1 MTR_5g036580 30.151 199 121 8 281 469 166 356 2.30e-19 90.5
MS.gene031273.t1 MTR_3g111600 30.348 201 118 9 281 469 80 270 8.72e-19 87.0
MS.gene031273.t1 MTR_7g094230 27.128 188 113 6 281 457 151 325 3.02e-18 86.3
MS.gene031273.t1 MTR_7g109210 29.949 197 123 9 281 469 159 348 3.77e-18 86.3
MS.gene031273.t1 MTR_6g008900 28.889 225 139 10 256 469 143 357 8.83e-18 85.1
MS.gene031273.t1 MTR_4g071620 28.889 225 139 10 256 469 143 357 8.83e-18 85.1
MS.gene031273.t1 MTR_1g021855 30.151 199 122 8 281 469 165 356 1.22e-17 84.7
MS.gene031273.t1 MTR_8g078240 25.962 208 134 8 281 476 142 341 1.38e-15 78.6
MS.gene031273.t1 MTR_5g059865 55.405 74 33 0 90 163 25 98 3.69e-14 70.1
MS.gene031273.t1 MTR_1g089820 27.128 188 113 6 281 457 154 328 4.61e-14 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031273.t1 AT5G54690 79.036 477 98 2 10 484 58 534 0.0 807
MS.gene031273.t1 AT5G15470 55.789 475 208 2 9 482 57 530 0.0 570
MS.gene031273.t1 AT3G01040 55.579 475 209 2 9 482 57 530 0.0 562
MS.gene031273.t1 AT3G01040 55.579 475 209 2 9 482 57 530 0.0 562
MS.gene031273.t1 AT3G01040 52.421 475 191 3 9 482 57 497 7.41e-177 506
MS.gene031273.t1 AT3G58790 42.251 471 255 5 20 482 77 538 2.48e-128 384
MS.gene031273.t1 AT3G58790 45.813 406 209 3 82 482 7 406 2.84e-128 379
MS.gene031273.t1 AT5G47780 43.192 426 214 6 64 482 210 614 4.41e-119 362
MS.gene031273.t1 AT3G61130 41.587 416 223 5 67 482 276 671 4.06e-118 362
MS.gene031273.t1 AT3G25140 41.647 425 228 6 58 482 153 557 9.70e-114 347
MS.gene031273.t1 AT1G18580 38.928 429 242 6 52 480 126 534 3.11e-110 337
MS.gene031273.t1 AT3G02350 43.333 420 218 6 64 482 159 559 5.62e-108 332
MS.gene031273.t1 AT4G38270 40.976 410 221 6 77 482 286 678 8.80e-107 332
MS.gene031273.t1 AT4G38270 40.976 410 221 6 77 482 282 674 1.31e-106 332
MS.gene031273.t1 AT2G46480 39.120 432 246 4 51 482 124 538 4.24e-102 316
MS.gene031273.t1 AT2G46480 39.120 432 246 4 51 482 137 551 5.24e-102 316
MS.gene031273.t1 AT2G20810 40.295 407 217 9 81 482 150 535 1.61e-98 306
MS.gene031273.t1 AT2G46480 35.417 432 237 4 51 482 124 513 1.13e-87 278
MS.gene031273.t1 AT2G46480 35.417 432 237 4 51 482 137 526 1.91e-87 278
MS.gene031273.t1 AT1G06780 32.874 435 251 7 51 484 195 589 2.61e-80 261
MS.gene031273.t1 AT1G06780 32.874 435 251 7 51 484 208 602 4.27e-80 261
MS.gene031273.t1 AT2G30575 33.573 417 235 7 67 482 233 608 1.11e-79 260
MS.gene031273.t1 AT2G38650 32.326 430 239 10 64 482 229 617 1.57e-61 212
MS.gene031273.t1 AT2G38650 32.326 430 239 10 64 482 229 617 1.57e-61 212
MS.gene031273.t1 AT2G38650 33.036 336 174 9 64 388 229 524 7.49e-39 148
MS.gene031273.t1 AT3G06260 25.373 201 137 6 263 457 131 324 1.53e-20 93.2
MS.gene031273.t1 AT4G02130 30.612 196 123 7 281 469 150 339 2.51e-20 92.4
MS.gene031273.t1 AT4G02130 30.612 196 123 7 281 469 150 339 2.51e-20 92.4
MS.gene031273.t1 AT4G02130 30.612 196 123 7 281 469 150 339 2.51e-20 92.4
MS.gene031273.t1 AT3G28340 29.864 221 125 10 264 469 141 346 2.88e-20 92.8
MS.gene031273.t1 AT1G02720 29.082 196 126 7 281 469 165 354 4.17e-18 86.3
MS.gene031273.t1 AT1G02720 29.082 196 126 7 281 469 165 354 4.17e-18 86.3
MS.gene031273.t1 AT3G62660 29.592 196 125 7 281 469 164 353 4.93e-18 85.9
MS.gene031273.t1 AT1G70090 26.136 352 201 16 131 469 54 359 4.97e-18 86.3
MS.gene031273.t1 AT1G70090 26.136 352 201 16 131 469 54 359 4.97e-18 86.3
MS.gene031273.t1 AT1G13250 29.302 215 138 8 263 469 125 333 3.76e-16 80.1
MS.gene031273.t1 AT1G19300 28.358 201 122 9 281 469 150 340 7.57e-16 79.3
MS.gene031273.t1 AT1G24170 28.934 197 126 8 281 469 172 362 2.40e-15 78.2
MS.gene031273.t1 AT3G50760 27.053 207 140 7 278 476 133 336 3.65e-15 77.0

Find 119 sgRNAs with CRISPR-Local

Find 243 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATTAGGGCCAAGGATTT+TGG 0.132357 2.1:+18302449 MS.gene031273:CDS
TCCACGTTATAGATCCTTTC+TGG 0.192422 2.1:+18304396 MS.gene031273:CDS
ATATAGATACTCTTGGATTT+TGG 0.205827 2.1:-18303033 None:intergenic
AAAGTTTGGTATATCACTTC+TGG 0.235664 2.1:-18302608 None:intergenic
ACCTAACCTTGCTTAGCATT+TGG 0.237670 2.1:-18300882 None:intergenic
AGAAGGTGCGGTCGCAGTTT+AGG 0.262845 2.1:+18303447 MS.gene031273:CDS
TAAGAGATTACAGTTGATTC+AGG 0.287098 2.1:-18302480 None:intergenic
GTCCACAATGATCTTAGTTC+TGG 0.292501 2.1:-18304527 None:intergenic
CCTAACCTTGCTTAGCATTT+GGG 0.308038 2.1:-18300881 None:intergenic
ACAAGTTTGTGATGTCAAAA+AGG 0.308600 2.1:+18303837 MS.gene031273:CDS
GAAGGTGCGGTCGCAGTTTA+GGG 0.310979 2.1:+18303448 MS.gene031273:CDS
CAATTGGTTCATCTAAAGTT+TGG 0.330150 2.1:-18302622 None:intergenic
AAGTTTAACTGCAAATGTTT+TGG 0.330421 2.1:-18302729 None:intergenic
ACAAACTTTAGAAGAGTTCA+TGG 0.335034 2.1:+18302679 MS.gene031273:CDS
ACCTAGTCCTTTGTTCCATA+AGG 0.339141 2.1:-18303007 None:intergenic
CTGTTATTAGGTAACCCTTA+TGG 0.345194 2.1:+18302992 MS.gene031273:intron
CCTTTGAAAACCAATCAAAA+TGG 0.349718 2.1:-18303388 None:intergenic
ATGTGTATAACAACCTTGTT+AGG 0.350944 2.1:-18303275 None:intergenic
TTCTCCATTGCTTCTAAAAC+AGG 0.359843 2.1:-18303419 None:intergenic
TGCAGTTAAACTTAGAGAAA+TGG 0.369361 2.1:+18302739 MS.gene031273:CDS
TATCTGAGGCTAAAACAAAA+TGG 0.373236 2.1:-18303199 None:intergenic
TAAGCAATACATATCATCAT+TGG 0.375137 2.1:+18303978 MS.gene031273:CDS
TTCTGGCATATGCTTGGATT+GGG 0.375631 2.1:+18304413 MS.gene031273:CDS
AAGGCGTGCTGCTGCGTTGT+TGG 0.378821 2.1:-18303126 None:intergenic
ATGATATGTATTGCTTATAT+TGG 0.379003 2.1:-18303972 None:intergenic
ATGAACTCTTCTAAAGTTTG+TGG 0.385053 2.1:-18302677 None:intergenic
CCTAGTCCTTTGTTCCATAA+GGG 0.386334 2.1:-18303006 None:intergenic
GGCTAAAACAAAATGGTAAT+AGG 0.387821 2.1:-18303192 None:intergenic
TTTCTGGCATATGCTTGGAT+TGG 0.395599 2.1:+18304412 MS.gene031273:CDS
TATGCTTGGATTGGGATATC+AGG 0.401194 2.1:+18304421 MS.gene031273:CDS
TCAATCACAGCAGGTGATAA+AGG 0.405589 2.1:-18303350 None:intergenic
TTTAGTTCATCATTGCCAAT+TGG 0.409872 2.1:-18302638 None:intergenic
CCTGGATTGATAGCATTTCA+TGG 0.413843 2.1:+18304368 MS.gene031273:CDS
TCAAGACAATGAAGTTGTTT+CGG 0.419494 2.1:-18303080 None:intergenic
ACAGCTGTGGATGGCATTGA+TGG 0.427978 2.1:+18301305 MS.gene031273:intron
AACGAATGTGCTTGGGCCTA+CGG 0.428513 2.1:+18303914 MS.gene031273:CDS
CTTATTATCCCATGCAGGCT+TGG 0.429889 2.1:+18303315 MS.gene031273:CDS
TTTATCACCTGCTGTGATTG+AGG 0.440648 2.1:+18303352 MS.gene031273:CDS
GATCCTTTCTGGCATATGCT+TGG 0.446300 2.1:+18304407 MS.gene031273:CDS
CCTTGCTTAGCATTTGGGTC+AGG 0.448391 2.1:-18300876 None:intergenic
AGATAATGTGCTTGCTGCCT+CGG 0.449906 2.1:+18303217 MS.gene031273:CDS
AGAGTTCATGGTTAAAATGA+AGG 0.450820 2.1:+18302691 MS.gene031273:CDS
ATTATATTTGCAGGTTGTCT+AGG 0.452130 2.1:+18302423 MS.gene031273:intron
CAAACTTTAGATGAACCAAT+TGG 0.453888 2.1:+18302623 MS.gene031273:CDS
GTTCATCACTGAATTATACT+TGG 0.454141 2.1:-18303546 None:intergenic
GCTTTGCCCTGCCATTGAAA+TGG 0.454180 2.1:-18304484 None:intergenic
TCAATCCCAACGAATGTGCT+TGG 0.455578 2.1:+18303906 MS.gene031273:CDS
AATTGGCAATGATGAACTAA+AGG 0.456766 2.1:+18302640 MS.gene031273:CDS
TTAAATCAGACCTGAGTTTG+TGG 0.457853 2.1:+18304327 MS.gene031273:CDS
GTGTCATCCATTTCAATGGC+AGG 0.458742 2.1:+18304477 MS.gene031273:CDS
AAGTTTGGTATATCACTTCT+GGG 0.462799 2.1:-18302607 None:intergenic
ACCTGAGTTTGTGGCAGCTA+GGG 0.474996 2.1:+18304336 MS.gene031273:CDS
GCATGGGATAATAAGTCTTT+CGG 0.475809 2.1:-18303307 None:intergenic
CAATCCCAACGAATGTGCTT+GGG 0.478614 2.1:+18303907 MS.gene031273:CDS
ATTCAGTGATGAACCACATT+CGG 0.485585 2.1:+18303555 MS.gene031273:CDS
TAGGCCCAAGCACATTCGTT+GGG 0.491286 2.1:-18303911 None:intergenic
AAGCAATACATATCATCATT+GGG 0.493192 2.1:+18303979 MS.gene031273:CDS
ATTGGCAATGATGAACTAAA+GGG 0.496348 2.1:+18302641 MS.gene031273:CDS
GCAGTTTAGGGGAGGTTCAT+CGG 0.501375 2.1:+18303460 MS.gene031273:CDS
CATGGCGATATAGATACTCT+TGG 0.502065 2.1:-18303040 None:intergenic
AAGACCACCTTGTTAAGACT+TGG 0.504189 2.1:-18303713 None:intergenic
GACATGAATGGAAAAGTGAA+TGG 0.504634 2.1:+18303788 MS.gene031273:CDS
CTGTGGGACATTGACATGAA+TGG 0.510723 2.1:+18303776 MS.gene031273:CDS
ACCTGCTGTGATTGAGGTCA+AGG 0.515480 2.1:+18303358 MS.gene031273:CDS
CAATGAGAACCAAGCCTGCA+TGG 0.521244 2.1:-18303324 None:intergenic
GTTGATGATGTTGAGAATGC+TGG 0.527031 2.1:+18304455 MS.gene031273:CDS
TAGGAATTGTCAACAAGGGC+AGG 0.527659 2.1:-18303173 None:intergenic
CCATGAAATGCTATCAATCC+AGG 0.531538 2.1:-18304368 None:intergenic
TTGATTTGGAGGCTTGGAGG+AGG 0.533922 2.1:+18303948 MS.gene031273:CDS
ATATCATCATTGGGTTGCGC+AGG 0.533975 2.1:+18303988 MS.gene031273:CDS
TCCCTAGCTGCCACAAACTC+AGG 0.537117 2.1:-18304337 None:intergenic
GCTGGTGTCATCCATTTCAA+TGG 0.546735 2.1:+18304473 MS.gene031273:CDS
GACCTGAGTTTGTGGCAGCT+AGG 0.547386 2.1:+18304335 MS.gene031273:CDS
GTATGCTGCTTGATGCTACA+TGG 0.547890 2.1:-18303058 None:intergenic
GTAGGCCCAAGCACATTCGT+TGG 0.549124 2.1:-18303912 None:intergenic
AACTGATCTTACACCTCTGT+GGG 0.552088 2.1:+18303760 MS.gene031273:CDS
CAGCTAGGGACATTACCTCC+TGG 0.553175 2.1:+18304350 MS.gene031273:CDS
TTCATCACTGAATTATACTT+GGG 0.554268 2.1:-18303545 None:intergenic
TGTTATTGCAGCAAAACTAC+AGG 0.556038 2.1:+18303514 MS.gene031273:CDS
GGTCGTCTACCCAAAATCCT+TGG 0.557130 2.1:-18302459 None:intergenic
GCCTTGACCTCAATCACAGC+AGG 0.559932 2.1:-18303359 None:intergenic
CAAAACAAGTGCTCTACCAT+AGG 0.561432 2.1:+18301329 MS.gene031273:CDS
TTCATGGTTAAAATGAAGGA+AGG 0.563822 2.1:+18302695 MS.gene031273:CDS
ATGGTTAAAATGAAGGAAGG+TGG 0.565029 2.1:+18302698 MS.gene031273:CDS
AATCCAAGCATATGCCAGAA+AGG 0.569673 2.1:-18304410 None:intergenic
AAAGACTTATTATCCCATGC+AGG 0.581237 2.1:+18303310 MS.gene031273:CDS
AGCAATGGAGAAAGATCAGA+AGG 0.582954 2.1:+18303430 MS.gene031273:CDS
CGGGTAGATGTATCCGAATG+TGG 0.586568 2.1:-18303568 None:intergenic
AATGAGAACCAAGCCTGCAT+GGG 0.602294 2.1:-18303323 None:intergenic
TATGGAACAAAGGACTAGGT+TGG 0.602971 2.1:+18303010 MS.gene031273:CDS
CCCTTATGGAACAAAGGACT+AGG 0.608232 2.1:+18303006 MS.gene031273:CDS
TGTCATCCATTTCAATGGCA+GGG 0.612684 2.1:+18304478 MS.gene031273:CDS
GTGCGGTCGCAGTTTAGGGG+AGG 0.618601 2.1:+18303452 MS.gene031273:CDS
AGGTAACCCTTATGGAACAA+AGG 0.619724 2.1:+18303000 MS.gene031273:intron
TAACTGTCTACGACCTAACA+AGG 0.621720 2.1:+18303262 MS.gene031273:CDS
TTCCAGAACTAAGATCATTG+TGG 0.622845 2.1:+18304525 MS.gene031273:CDS
TCAATGGCAGGGCAAAGCCA+TGG 0.623067 2.1:+18304489 MS.gene031273:CDS
GTTCCGCAGACGGTAGCTGA+AGG 0.623605 2.1:-18303145 None:intergenic
AAACTGATCTTACACCTCTG+TGG 0.626571 2.1:+18303759 MS.gene031273:CDS
CCTGACCCAAATGCTAAGCA+AGG 0.628392 2.1:+18300876 MS.gene031273:CDS
ACGCCTTCAGCTACCGTCTG+CGG 0.629379 2.1:+18303142 MS.gene031273:CDS
GCAATGATGAACTAAAGGGA+AGG 0.629505 2.1:+18302645 MS.gene031273:CDS
GCAGGAACTAGTTCCGCAGA+CGG 0.630003 2.1:-18303155 None:intergenic
AAGGTGCGGTCGCAGTTTAG+GGG 0.630055 2.1:+18303449 MS.gene031273:CDS
GGAGCAGTGGAAACATGCAA+TGG 0.639468 2.1:+18303809 MS.gene031273:CDS
GGCAGCAAGCACATTATCTG+AGG 0.641548 2.1:-18303213 None:intergenic
GGAAAAGCTATGTCTAGCCA+TGG 0.645591 2.1:-18304506 None:intergenic
TGGAAAAGTGAATGGAGCAG+TGG 0.647140 2.1:+18303796 MS.gene031273:CDS
GGTAATAGGAATTGTCAACA+AGG 0.647228 2.1:-18303178 None:intergenic
GCTGTTTCCAAGTCTTAACA+AGG 0.659697 2.1:+18303706 MS.gene031273:intron
GTAATAGGAATTGTCAACAA+GGG 0.660966 2.1:-18303177 None:intergenic
TGGAGAAAGATCAGAAGGTG+CGG 0.665818 2.1:+18303435 MS.gene031273:CDS
GTTTCCAAGTCTTAACAAGG+TGG 0.682453 2.1:+18303709 MS.gene031273:CDS
GCCAGAAAGGATCTATAACG+TGG 0.683226 2.1:-18304397 None:intergenic
GTATCACAATGTCATCGTCG+AGG 0.702865 2.1:-18303736 None:intergenic
GAGTGATGTTGCAACAACCG+AGG 0.712252 2.1:-18303234 None:intergenic
TGAAATGCTATCAATCCAGG+AGG 0.724414 2.1:-18304365 None:intergenic
CATTCGGATACATCTACCCG+AGG 0.731272 2.1:+18303571 MS.gene031273:CDS
TTCATGTCAATGTCCCACAG+AGG 0.769997 2.1:-18303773 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTAAATTTTTTAATAAAA+TGG - chr2.1:18302533-18302552 None:intergenic 0.0%
!! CATTAAAATTATTTCAAATT+TGG - chr2.1:18302924-18302943 None:intergenic 10.0%
!! TATAATATAAAAAAACCAAA+TGG - chr2.1:18301073-18301092 None:intergenic 10.0%
!! TATATAATTTATTATATGCA+AGG - chr2.1:18302199-18302218 None:intergenic 10.0%
!! TTTCCATTATAAAATAGATA+AGG + chr2.1:18302150-18302169 MS.gene031273:intron 15.0%
!!! AAACCTTATCTATTTTATAA+TGG - chr2.1:18302156-18302175 None:intergenic 15.0%
!!! AATGATTCATATTTTAAACT+CGG + chr2.1:18301464-18301483 MS.gene031273:intron 15.0%
!!! AATTTAGATCTATTTTCATA+TGG + chr2.1:18302314-18302333 MS.gene031273:intron 15.0%
!!! ATTTTACTTTGATTTTCTAT+TGG + chr2.1:18302553-18302572 MS.gene031273:intron 15.0%
!!! TGAAATTTTTAGATATTAGA+GGG - chr2.1:18303889-18303908 None:intergenic 15.0%
!!! TTGAAATTTTTAGATATTAG+AGG - chr2.1:18303890-18303909 None:intergenic 15.0%
!!! TTTTGATATATGTTATTTCA+AGG - chr2.1:18300920-18300939 None:intergenic 15.0%
!! ATGATAAATGAACTGTTATT+AGG + chr2.1:18302980-18302999 MS.gene031273:intron 20.0%
!! ATGATATGTATTGCTTATAT+TGG - chr2.1:18303975-18303994 None:intergenic 20.0%
!! CAAATCAATAAAAATGTTAC+CGG + chr2.1:18301874-18301893 MS.gene031273:intron 20.0%
!! CATTTGTCTTTATTGTATTA+TGG - chr2.1:18304186-18304205 None:intergenic 20.0%
!! TAACTTCTAATTATATTTGC+AGG + chr2.1:18302414-18302433 MS.gene031273:intron 20.0%
!! TATCACTCATATTGTTATAT+CGG + chr2.1:18302371-18302390 MS.gene031273:intron 20.0%
!! TATGTTTGTATTACATTCTA+AGG + chr2.1:18304011-18304030 MS.gene031273:intron 20.0%
!! TTTATTGTATTATGGTAGAA+GGG - chr2.1:18304178-18304197 None:intergenic 20.0%
!!! AACTTGTCTGTATTTTTATA+CGG + chr2.1:18302240-18302259 MS.gene031273:intron 20.0%
!!! AAGATTTTAAAATCAAAAGC+CGG - chr2.1:18301896-18301915 None:intergenic 20.0%
!!! ATAAAAATACAGACAAGTTT+TGG - chr2.1:18302239-18302258 None:intergenic 20.0%
!!! ATAGTAATTATGTCACATTT+TGG + chr2.1:18301688-18301707 MS.gene031273:intron 20.0%
!!! CATTTTTATTGATTTGTTAG+AGG - chr2.1:18301870-18301889 None:intergenic 20.0%
!!! GATGATTCATATTTTAAACT+CGG + chr2.1:18301594-18301613 MS.gene031273:intron 20.0%
!!! TAATGGAAAGTTTTATTCTA+TGG - chr2.1:18302139-18302158 None:intergenic 20.0%
!!! TATATTGTGTATGTCTATTT+TGG + chr2.1:18301103-18301122 MS.gene031273:intron 20.0%
! AAGCAATACATATCATCATT+GGG + chr2.1:18303979-18303998 MS.gene031273:CDS 25.0%
! ACAATTAGAATAGTTACTGT+TGG + chr2.1:18302102-18302121 MS.gene031273:intron 25.0%
! ATCATTTGATCTTCAATCAA+TGG + chr2.1:18301649-18301668 MS.gene031273:intron 25.0%
! CTTTATTGTATTATGGTAGA+AGG - chr2.1:18304179-18304198 None:intergenic 25.0%
! GTTGTCTAGGAAAAAAATTA+GGG + chr2.1:18302436-18302455 MS.gene031273:CDS 25.0%
! TAAGCAATACATATCATCAT+TGG + chr2.1:18303978-18303997 MS.gene031273:CDS 25.0%
! TGTGAAATGAAATAAAGAAG+AGG + chr2.1:18301021-18301040 MS.gene031273:intron 25.0%
! TTAAGTCTTAGTTCCATTAT+AGG - chr2.1:18302296-18302315 None:intergenic 25.0%
! TTATTGTATTATGGTAGAAG+GGG - chr2.1:18304177-18304196 None:intergenic 25.0%
! TTCATCACTGAATTATACTT+GGG - chr2.1:18303548-18303567 None:intergenic 25.0%
!! AAGTTTAACTGCAAATGTTT+TGG - chr2.1:18302732-18302751 None:intergenic 25.0%
!! ATATAGATACTCTTGGATTT+TGG - chr2.1:18303036-18303055 None:intergenic 25.0%
!! ATTTTTCATCTCTCCTATAA+TGG + chr2.1:18302280-18302299 MS.gene031273:intron 25.0%
!! GTATTACATTCTAAGGAAAA+TGG + chr2.1:18304018-18304037 MS.gene031273:intron 25.0%
!!! AAATGACATGACTTTTTCAT+AGG + chr2.1:18302583-18302602 MS.gene031273:intron 25.0%
!!! AAGCATGTTATTTTTTGCAA+AGG + chr2.1:18301799-18301818 MS.gene031273:intron 25.0%
!!! ATTTTGATTGGTTTTCAAAG+GGG + chr2.1:18303390-18303409 MS.gene031273:CDS 25.0%
!!! CATTTTGATTGGTTTTCAAA+GGG + chr2.1:18303389-18303408 MS.gene031273:CDS 25.0%
!!! TTACTTTGATTTTCTATTGG+TGG + chr2.1:18302556-18302575 MS.gene031273:intron 25.0%
!!! TTTATTGATTTGTTAGAGGT+TGG - chr2.1:18301866-18301885 None:intergenic 25.0%
AAAGTTTGGTATATCACTTC+TGG - chr2.1:18302611-18302630 None:intergenic 30.0%
AACCAAATGGAAAAACAAAC+AGG - chr2.1:18301060-18301079 None:intergenic 30.0%
AAGTTTGGTATATCACTTCT+GGG - chr2.1:18302610-18302629 None:intergenic 30.0%
AATGTCCAATTTCAATCCAA+CGG - chr2.1:18302836-18302855 None:intergenic 30.0%
AATTGGCAATGATGAACTAA+AGG + chr2.1:18302640-18302659 MS.gene031273:CDS 30.0%
ACAAGTTTGTGATGTCAAAA+AGG + chr2.1:18303837-18303856 MS.gene031273:CDS 30.0%
ACTGTATGATCAACAAATAG+AGG - chr2.1:18300991-18301010 None:intergenic 30.0%
AGAGTTCATGGTTAAAATGA+AGG + chr2.1:18302691-18302710 MS.gene031273:CDS 30.0%
ATGTAGGAAATAGATTCCTT+AGG - chr2.1:18301715-18301734 None:intergenic 30.0%
ATGTGTATAACAACCTTGTT+AGG - chr2.1:18303278-18303297 None:intergenic 30.0%
ATTATATTTGCAGGTTGTCT+AGG + chr2.1:18302423-18302442 MS.gene031273:intron 30.0%
ATTGGCAATGATGAACTAAA+GGG + chr2.1:18302641-18302660 MS.gene031273:CDS 30.0%
CAAACTTTAGATGAACCAAT+TGG + chr2.1:18302623-18302642 MS.gene031273:CDS 30.0%
CAGGCACAAAAACATTTATT+TGG - chr2.1:18303653-18303672 None:intergenic 30.0%
GGCTAAAACAAAATGGTAAT+AGG - chr2.1:18303195-18303214 None:intergenic 30.0%
GGTTGTCTAGGAAAAAAATT+AGG + chr2.1:18302435-18302454 MS.gene031273:intron 30.0%
GTAATAGGAATTGTCAACAA+GGG - chr2.1:18303180-18303199 None:intergenic 30.0%
GTTCATCACTGAATTATACT+TGG - chr2.1:18303549-18303568 None:intergenic 30.0%
TACATATATCTCCAAGTTTG+AGG + chr2.1:18301147-18301166 MS.gene031273:intron 30.0%
TAGACATACACAATATAAGC+AGG - chr2.1:18301100-18301119 None:intergenic 30.0%
TCAAGACAATGAAGTTGTTT+CGG - chr2.1:18303083-18303102 None:intergenic 30.0%
TGCAGTTAAACTTAGAGAAA+TGG + chr2.1:18302739-18302758 MS.gene031273:CDS 30.0%
TGTAGGAAATAGATTCCTTA+GGG - chr2.1:18301714-18301733 None:intergenic 30.0%
TTCATGGTTAAAATGAAGGA+AGG + chr2.1:18302695-18302714 MS.gene031273:CDS 30.0%
! ACAAACTTTAGAAGAGTTCA+TGG + chr2.1:18302679-18302698 MS.gene031273:CDS 30.0%
! AGTTTTGCTGCAATAACATT+TGG - chr2.1:18303512-18303531 None:intergenic 30.0%
! CAATTGGTTCATCTAAAGTT+TGG - chr2.1:18302625-18302644 None:intergenic 30.0%
! CCTTTGAAAACCAATCAAAA+TGG - chr2.1:18303391-18303410 None:intergenic 30.0%
! TAAGAGATTACAGTTGATTC+AGG - chr2.1:18302483-18302502 None:intergenic 30.0%
! TATCTGAGGCTAAAACAAAA+TGG - chr2.1:18303202-18303221 None:intergenic 30.0%
! TTTAGTTCATCATTGCCAAT+TGG - chr2.1:18302641-18302660 None:intergenic 30.0%
!! AACCTGTTTGTTTTTCCATT+TGG + chr2.1:18301055-18301074 MS.gene031273:intron 30.0%
!! ATGAACTCTTCTAAAGTTTG+TGG - chr2.1:18302680-18302699 None:intergenic 30.0%
!! TGTGTATGTCTATTTTGGAT+TGG + chr2.1:18301108-18301127 MS.gene031273:intron 30.0%
!!! CATGAACATTTTTGATTTGG+AGG + chr2.1:18303937-18303956 MS.gene031273:CDS 30.0%
!!! CCATTTTGATTGGTTTTCAA+AGG + chr2.1:18303388-18303407 MS.gene031273:CDS 30.0%
AAAGACTTATTATCCCATGC+AGG + chr2.1:18303310-18303329 MS.gene031273:CDS 35.0%
AAGCGAGATATTGTGACTAA+AGG - chr2.1:18301415-18301434 None:intergenic 35.0%
AAGGTTATGCTGTAAAAGGA+AGG - chr2.1:18300943-18300962 None:intergenic 35.0%
AATTCAAGCAGTCAGTACAT+CGG - chr2.1:18302876-18302895 None:intergenic 35.0%
ACCAAGCTCTTTCAAACAAA+AGG - chr2.1:18304091-18304110 None:intergenic 35.0%
ACTGCTTGAATTCGTGTTAT+TGG + chr2.1:18302884-18302903 MS.gene031273:intron 35.0%
ATCAAAAATGTTCATGCCGT+AGG - chr2.1:18303933-18303952 None:intergenic 35.0%
ATGGTTAAAATGAAGGAAGG+TGG + chr2.1:18302698-18302717 MS.gene031273:CDS 35.0%
ATTCAGTGATGAACCACATT+CGG + chr2.1:18303555-18303574 MS.gene031273:CDS 35.0%
CTCTTTCAAACAAAAGGCTT+TGG - chr2.1:18304085-18304104 None:intergenic 35.0%
CTGTTATTAGGTAACCCTTA+TGG + chr2.1:18302992-18303011 MS.gene031273:intron 35.0%
GACATGAATGGAAAAGTGAA+TGG + chr2.1:18303788-18303807 MS.gene031273:CDS 35.0%
GCATGGGATAATAAGTCTTT+CGG - chr2.1:18303310-18303329 None:intergenic 35.0%
GGTAATAGGAATTGTCAACA+AGG - chr2.1:18303181-18303200 None:intergenic 35.0%
GTCATTGTTATAAGCATCAC+AGG - chr2.1:18303672-18303691 None:intergenic 35.0%
TAGGAAAAAAATTAGGGCCA+AGG + chr2.1:18302442-18302461 MS.gene031273:CDS 35.0%
TCTGTTATTACAGATTCACC+TGG - chr2.1:18302001-18302020 None:intergenic 35.0%
TGATTACGCAGTTAGAAAGA+AGG + chr2.1:18301548-18301567 MS.gene031273:intron 35.0%
TGTCAAGGTTATGCTGTAAA+AGG - chr2.1:18300947-18300966 None:intergenic 35.0%
TGTTATTGCAGCAAAACTAC+AGG + chr2.1:18303514-18303533 MS.gene031273:CDS 35.0%
TTAAATCAGACCTGAGTTTG+TGG + chr2.1:18304327-18304346 MS.gene031273:CDS 35.0%
TTCCAGAACTAAGATCATTG+TGG + chr2.1:18304525-18304544 MS.gene031273:CDS 35.0%
TTGGACATTTCTCAATCCAA+CGG + chr2.1:18302847-18302866 MS.gene031273:intron 35.0%
! AAAATTAGGGCCAAGGATTT+TGG + chr2.1:18302449-18302468 MS.gene031273:CDS 35.0%
! AAATTAGGGCCAAGGATTTT+GGG + chr2.1:18302450-18302469 MS.gene031273:CDS 35.0%
!! AGAAGAGCATCCTATAAGAA+AGG - chr2.1:18301238-18301257 None:intergenic 35.0%
!! CGGCATGAACATTTTTGATT+TGG + chr2.1:18303934-18303953 MS.gene031273:CDS 35.0%
!! TGTTCTTCACTTTTCTTCTG+AGG + chr2.1:18301267-18301286 MS.gene031273:intron 35.0%
!! TTCTCCATTGCTTCTAAAAC+AGG - chr2.1:18303422-18303441 None:intergenic 35.0%
!!! ACATTTTTGATTTGGAGGCT+TGG + chr2.1:18303942-18303961 MS.gene031273:CDS 35.0%
!!! TGTGTTTGTTTTAACAGCTG+TGG + chr2.1:18301292-18301311 MS.gene031273:intron 35.0%
!!! TTTGTTTTAACAGCTGTGGA+TGG + chr2.1:18301296-18301315 MS.gene031273:intron 35.0%
AAACTGATCTTACACCTCTG+TGG + chr2.1:18303759-18303778 MS.gene031273:CDS 40.0%
AACTCTTTAAGTCCTTTGCC+TGG - chr2.1:18301188-18301207 None:intergenic 40.0%
AACTGATCTTACACCTCTGT+GGG + chr2.1:18303760-18303779 MS.gene031273:CDS 40.0%
AACTGCAAGAACTCATGTCA+AGG - chr2.1:18300962-18300981 None:intergenic 40.0%
AAGACCACCTTGTTAAGACT+TGG - chr2.1:18303716-18303735 None:intergenic 40.0%
AAGCATGAACACATGTGTGA+AGG + chr2.1:18301747-18301766 MS.gene031273:intron 40.0%
AATCCAAGCATATGCCAGAA+AGG - chr2.1:18304413-18304432 None:intergenic 40.0%
ACAGTAACATGCCTCAAACT+TGG - chr2.1:18301161-18301180 None:intergenic 40.0%
ACCTAACCTTGCTTAGCATT+TGG - chr2.1:18300885-18300904 None:intergenic 40.0%
ACCTAGTCCTTTGTTCCATA+AGG - chr2.1:18303010-18303029 None:intergenic 40.0%
AGCAATGGAGAAAGATCAGA+AGG + chr2.1:18303430-18303449 MS.gene031273:CDS 40.0%
AGGTAACCCTTATGGAACAA+AGG + chr2.1:18303000-18303019 MS.gene031273:intron 40.0%
ATACATCTACCCGAGGTAAA+AGG + chr2.1:18303578-18303597 MS.gene031273:intron 40.0%
CAAAACAAGTGCTCTACCAT+AGG + chr2.1:18301329-18301348 MS.gene031273:CDS 40.0%
CATGGCGATATAGATACTCT+TGG - chr2.1:18303043-18303062 None:intergenic 40.0%
CCATGAAATGCTATCAATCC+AGG - chr2.1:18304371-18304390 None:intergenic 40.0%
CCTAACCTTGCTTAGCATTT+GGG - chr2.1:18300884-18300903 None:intergenic 40.0%
CCTAGTCCTTTGTTCCATAA+GGG - chr2.1:18303009-18303028 None:intergenic 40.0%
GCAATGATGAACTAAAGGGA+AGG + chr2.1:18302645-18302664 MS.gene031273:CDS 40.0%
GTCCACAATGATCTTAGTTC+TGG - chr2.1:18304530-18304549 None:intergenic 40.0%
GTTTCCAAGTCTTAACAAGG+TGG + chr2.1:18303709-18303728 MS.gene031273:CDS 40.0%
TAACTGTCTACGACCTAACA+AGG + chr2.1:18303262-18303281 MS.gene031273:CDS 40.0%
TACATCTACCCGAGGTAAAA+GGG + chr2.1:18303579-18303598 MS.gene031273:intron 40.0%
TATGGAACAAAGGACTAGGT+TGG + chr2.1:18303010-18303029 MS.gene031273:CDS 40.0%
TCAATCACAGCAGGTGATAA+AGG - chr2.1:18303353-18303372 None:intergenic 40.0%
TCCACGTTATAGATCCTTTC+TGG + chr2.1:18304396-18304415 MS.gene031273:CDS 40.0%
TGAAATGCTATCAATCCAGG+AGG - chr2.1:18304368-18304387 None:intergenic 40.0%
TGTCATCCATTTCAATGGCA+GGG + chr2.1:18304478-18304497 MS.gene031273:CDS 40.0%
TGTGACCGTTGGATTGAAAT+TGG + chr2.1:18302828-18302847 MS.gene031273:intron 40.0%
TTCTGGCATATGCTTGGATT+GGG + chr2.1:18304413-18304432 MS.gene031273:CDS 40.0%
TTTATCACCTGCTGTGATTG+AGG + chr2.1:18303352-18303371 MS.gene031273:CDS 40.0%
! CCTGGATTGATAGCATTTCA+TGG + chr2.1:18304368-18304387 MS.gene031273:CDS 40.0%
! GCTGTTTCCAAGTCTTAACA+AGG + chr2.1:18303706-18303725 MS.gene031273:intron 40.0%
! TATGCTTGGATTGGGATATC+AGG + chr2.1:18304421-18304440 MS.gene031273:CDS 40.0%
! TTTCTGGCATATGCTTGGAT+TGG + chr2.1:18304412-18304431 MS.gene031273:CDS 40.0%
!! AGGCATTGCACCATTTTGAT+TGG + chr2.1:18303378-18303397 MS.gene031273:CDS 40.0%
!! GCCTTTTGTTTGAAAGAGCT+TGG + chr2.1:18304087-18304106 MS.gene031273:intron 40.0%
!! GTTGATGATGTTGAGAATGC+TGG + chr2.1:18304455-18304474 MS.gene031273:CDS 40.0%
!! TATGTCACATTTTGGCCCTA+AGG + chr2.1:18301696-18301715 MS.gene031273:intron 40.0%
!!! TGATTGGTTTTCAAAGGGGA+AGG + chr2.1:18303394-18303413 MS.gene031273:CDS 40.0%
!!! TTTTTGATTTGGAGGCTTGG+AGG + chr2.1:18303945-18303964 MS.gene031273:CDS 40.0%
AATGAGAACCAAGCCTGCAT+GGG - chr2.1:18303326-18303345 None:intergenic 45.0%
ATCAGCACATTTGTGACCGT+TGG + chr2.1:18302817-18302836 MS.gene031273:intron 45.0%
CAACTTCAATTGTTGCGCCA+AGG + chr2.1:18304149-18304168 MS.gene031273:intron 45.0%
CAATCCCAACGAATGTGCTT+GGG + chr2.1:18303907-18303926 MS.gene031273:CDS 45.0%
CACATGTGTGAAGGTGGATA+AGG + chr2.1:18301756-18301775 MS.gene031273:intron 45.0%
CATGAACACATGTGTGAAGG+TGG + chr2.1:18301750-18301769 MS.gene031273:intron 45.0%
CCCAAATGCTAAGCAAGGTT+AGG + chr2.1:18300881-18300900 MS.gene031273:intron 45.0%
CCCTTATGGAACAAAGGACT+AGG + chr2.1:18303006-18303025 MS.gene031273:CDS 45.0%
CGTGTGTGAGAGAGAAAAGA+GGG - chr2.1:18301361-18301380 None:intergenic 45.0%
CTGTGGGACATTGACATGAA+TGG + chr2.1:18303776-18303795 MS.gene031273:CDS 45.0%
CTTATTATCCCATGCAGGCT+TGG + chr2.1:18303315-18303334 MS.gene031273:CDS 45.0%
CTTTAAGTCCTTTGCCTGGA+AGG - chr2.1:18301184-18301203 None:intergenic 45.0%
GCCAGAAAGGATCTATAACG+TGG - chr2.1:18304400-18304419 None:intergenic 45.0%
GCTTGTGACTCTGTCTATGT+AGG - chr2.1:18301731-18301750 None:intergenic 45.0%
GGAAAAGCTATGTCTAGCCA+TGG - chr2.1:18304509-18304528 None:intergenic 45.0%
GTATCACAATGTCATCGTCG+AGG - chr2.1:18303739-18303758 None:intergenic 45.0%
GTGTCATCCATTTCAATGGC+AGG + chr2.1:18304477-18304496 MS.gene031273:CDS 45.0%
TAGGAATTGTCAACAAGGGC+AGG - chr2.1:18303176-18303195 None:intergenic 45.0%
TCAAAGTGAAAGTTGCGTCG+AGG + chr2.1:18301210-18301229 MS.gene031273:intron 45.0%
TCAATCCCAACGAATGTGCT+TGG + chr2.1:18303906-18303925 MS.gene031273:CDS 45.0%
TGGAAAAGTGAATGGAGCAG+TGG + chr2.1:18303796-18303815 MS.gene031273:CDS 45.0%
TGGAGAAAGATCAGAAGGTG+CGG + chr2.1:18303435-18303454 MS.gene031273:CDS 45.0%
TTCATGTCAATGTCCCACAG+AGG - chr2.1:18303776-18303795 None:intergenic 45.0%
! AGATAATGTGCTTGCTGCCT+CGG + chr2.1:18303217-18303236 MS.gene031273:CDS 45.0%
! ATATCATCATTGGGTTGCGC+AGG + chr2.1:18303988-18304007 MS.gene031273:CDS 45.0%
! CTAGCTATCCCTTTTACCTC+GGG - chr2.1:18303590-18303609 None:intergenic 45.0%
! GATCCTTTCTGGCATATGCT+TGG + chr2.1:18304407-18304426 MS.gene031273:CDS 45.0%
! GCTAGCTATCCCTTTTACCT+CGG - chr2.1:18303591-18303610 None:intergenic 45.0%
! GTATGCTGCTTGATGCTACA+TGG - chr2.1:18303061-18303080 None:intergenic 45.0%
! TCGCAAACGTCGTCACATTT+TGG + chr2.1:18302339-18302358 MS.gene031273:intron 45.0%
! TCGTGTTATTGGTGACTGCA+TGG + chr2.1:18302895-18302914 MS.gene031273:intron 45.0%
!! GAAAAGAGGGAGAGTACCTA+TGG - chr2.1:18301348-18301367 None:intergenic 45.0%
!! GCTGGTGTCATCCATTTCAA+TGG + chr2.1:18304473-18304492 MS.gene031273:CDS 45.0%
!!! GGTGCCTGTTTTAGAAGCAA+TGG + chr2.1:18303415-18303434 MS.gene031273:CDS 45.0%
AACGAATGTGCTTGGGCCTA+CGG + chr2.1:18303914-18303933 MS.gene031273:CDS 50.0%
ACCTGAGTTTGTGGCAGCTA+GGG + chr2.1:18304336-18304355 MS.gene031273:CDS 50.0%
ACCTGCTGTGATTGAGGTCA+AGG + chr2.1:18303358-18303377 MS.gene031273:CDS 50.0%
ACCTTGCAGTAGCAGGATGA+GGG - chr2.1:18301978-18301997 None:intergenic 50.0%
AGGCATGTTACTGTCCTTCC+AGG + chr2.1:18301167-18301186 MS.gene031273:intron 50.0%
CAATGAGAACCAAGCCTGCA+TGG - chr2.1:18303327-18303346 None:intergenic 50.0%
CATTCGGATACATCTACCCG+AGG + chr2.1:18303571-18303590 MS.gene031273:CDS 50.0%
CCTGACCCAAATGCTAAGCA+AGG + chr2.1:18300876-18300895 MS.gene031273:CDS 50.0%
CCTTGCTTAGCATTTGGGTC+AGG - chr2.1:18300879-18300898 None:intergenic 50.0%
CGGGTAGATGTATCCGAATG+TGG - chr2.1:18303571-18303590 None:intergenic 50.0%
GAGTGATGTTGCAACAACCG+AGG - chr2.1:18303237-18303256 None:intergenic 50.0%
GCAGTTTAGGGGAGGTTCAT+CGG + chr2.1:18303460-18303479 MS.gene031273:CDS 50.0%
GCGTGTGTGAGAGAGAAAAG+AGG - chr2.1:18301362-18301381 None:intergenic 50.0%
GCTTTGCCCTGCCATTGAAA+TGG - chr2.1:18304487-18304506 None:intergenic 50.0%
GGAGCAGTGGAAACATGCAA+TGG + chr2.1:18303809-18303828 MS.gene031273:CDS 50.0%
GGCAGCAAGCACATTATCTG+AGG - chr2.1:18303216-18303235 None:intergenic 50.0%
GGTCGTCTACCCAAAATCCT+TGG - chr2.1:18302462-18302481 None:intergenic 50.0%
GTTACTGTCCTTCCAGGCAA+AGG + chr2.1:18301173-18301192 MS.gene031273:intron 50.0%
TAGGCCCAAGCACATTCGTT+GGG - chr2.1:18303914-18303933 None:intergenic 50.0%
TGAAGTTGCTGCCATGTGAC+TGG - chr2.1:18304137-18304156 None:intergenic 50.0%
TTATGGTAGAAGGGGAGCCT+TGG - chr2.1:18304169-18304188 None:intergenic 50.0%
! ACAGCTGTGGATGGCATTGA+TGG + chr2.1:18301305-18301324 MS.gene031273:intron 50.0%
! TGTCCTCTTCTTTTCCCCTG+CGG + chr2.1:18302770-18302789 MS.gene031273:intron 50.0%
!! TTGATTTGGAGGCTTGGAGG+AGG + chr2.1:18303948-18303967 MS.gene031273:CDS 50.0%
AAGGTGCGGTCGCAGTTTAG+GGG + chr2.1:18303449-18303468 MS.gene031273:CDS 55.0%
ATCCTGCTACTGCAAGGTCC+AGG + chr2.1:18301980-18301999 MS.gene031273:intron 55.0%
CAGCTAGGGACATTACCTCC+TGG + chr2.1:18304350-18304369 MS.gene031273:CDS 55.0%
GACCTGAGTTTGTGGCAGCT+AGG + chr2.1:18304335-18304354 MS.gene031273:CDS 55.0%
GACCTTGCAGTAGCAGGATG+AGG - chr2.1:18301979-18301998 None:intergenic 55.0%
GCAGGAACTAGTTCCGCAGA+CGG - chr2.1:18303158-18303177 None:intergenic 55.0%
GCCTTGACCTCAATCACAGC+AGG - chr2.1:18303362-18303381 None:intergenic 55.0%
GTAGGCCCAAGCACATTCGT+TGG - chr2.1:18303915-18303934 None:intergenic 55.0%
GTCAGTACATCGGTGACCGT+TGG - chr2.1:18302866-18302885 None:intergenic 55.0%
TCAATGGCAGGGCAAAGCCA+TGG + chr2.1:18304489-18304508 MS.gene031273:CDS 55.0%
TCCCTAGCTGCCACAAACTC+AGG - chr2.1:18304340-18304359 None:intergenic 55.0%
TCCCTCATCCTGCTACTGCA+AGG + chr2.1:18301974-18301993 MS.gene031273:intron 55.0%
TGACCGCAGGGGAAAAGAAG+AGG - chr2.1:18302776-18302795 None:intergenic 55.0%
TTGCGCGCACACACATAGTC+AGG + chr2.1:18301386-18301405 MS.gene031273:intron 55.0%
! AGAAGGTGCGGTCGCAGTTT+AGG + chr2.1:18303447-18303466 MS.gene031273:CDS 55.0%
! CGTCGAGGCGCCTTTCTTAT+AGG + chr2.1:18301225-18301244 MS.gene031273:intron 55.0%
! GAAGGTGCGGTCGCAGTTTA+GGG + chr2.1:18303448-18303467 MS.gene031273:CDS 55.0%
ACGCCTTCAGCTACCGTCTG+CGG + chr2.1:18303142-18303161 MS.gene031273:CDS 60.0%
CACCTGGACCTTGCAGTAGC+AGG - chr2.1:18301985-18302004 None:intergenic 60.0%
CGTGCAAACAGTGACCGCAG+GGG - chr2.1:18302787-18302806 None:intergenic 60.0%
GCCATGTGACTGGACCTCAC+AGG - chr2.1:18304127-18304146 None:intergenic 60.0%
GCCTGTGAGGTCCAGTCACA+TGG + chr2.1:18304123-18304142 MS.gene031273:intron 60.0%
GCGTGCAAACAGTGACCGCA+GGG - chr2.1:18302788-18302807 None:intergenic 60.0%
GTTCCGCAGACGGTAGCTGA+AGG - chr2.1:18303148-18303167 None:intergenic 60.0%
TGCGTGCAAACAGTGACCGC+AGG - chr2.1:18302789-18302808 None:intergenic 60.0%
TTGTGCGACTCGAGCCTGTG+AGG + chr2.1:18304110-18304129 MS.gene031273:intron 60.0%
! AAGGCGTGCTGCTGCGTTGT+TGG - chr2.1:18303129-18303148 None:intergenic 60.0%
GTGCGGTCGCAGTTTAGGGG+AGG + chr2.1:18303452-18303471 MS.gene031273:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 18300873 18304604 18300873 ID=MS.gene031273
chr2.1 mRNA 18300873 18304604 18300873 ID=MS.gene031273.t1;Parent=MS.gene031273
chr2.1 exon 18300873 18300897 18300873 ID=MS.gene031273.t1.exon1;Parent=MS.gene031273.t1
chr2.1 CDS 18300873 18300897 18300873 ID=cds.MS.gene031273.t1;Parent=MS.gene031273.t1
chr2.1 exon 18301309 18301350 18301309 ID=MS.gene031273.t1.exon2;Parent=MS.gene031273.t1
chr2.1 CDS 18301309 18301350 18301309 ID=cds.MS.gene031273.t1;Parent=MS.gene031273.t1
chr2.1 exon 18302436 18302491 18302436 ID=MS.gene031273.t1.exon3;Parent=MS.gene031273.t1
chr2.1 CDS 18302436 18302491 18302436 ID=cds.MS.gene031273.t1;Parent=MS.gene031273.t1
chr2.1 exon 18302605 18302760 18302605 ID=MS.gene031273.t1.exon4;Parent=MS.gene031273.t1
chr2.1 CDS 18302605 18302760 18302605 ID=cds.MS.gene031273.t1;Parent=MS.gene031273.t1
chr2.1 exon 18303002 18303592 18303002 ID=MS.gene031273.t1.exon5;Parent=MS.gene031273.t1
chr2.1 CDS 18303002 18303592 18303002 ID=cds.MS.gene031273.t1;Parent=MS.gene031273.t1
chr2.1 exon 18303707 18304009 18303707 ID=MS.gene031273.t1.exon6;Parent=MS.gene031273.t1
chr2.1 CDS 18303707 18304009 18303707 ID=cds.MS.gene031273.t1;Parent=MS.gene031273.t1
chr2.1 exon 18304323 18304604 18304323 ID=MS.gene031273.t1.exon7;Parent=MS.gene031273.t1
chr2.1 CDS 18304323 18304604 18304323 ID=cds.MS.gene031273.t1;Parent=MS.gene031273.t1
Gene Sequence

>MS.gene031273

ATGCCTGACCCAAATGCTAAGCAAGGTTAGGTGAAAGATAGCAACCTTGAAATAACATATATCAAAACCTTCCTTTTACAGCATAACCTTGACATGAGTTCTTGCAGTTTTAATTCCTCTATTTGTTGATCATACAGTGCTTGAATTGTGTGAAATGAAATAAAGAAGAGGAAGAATTCAAGAACCTGTTTGTTTTTCCATTTGGTTTTTTTATATTATATTGTCCTGCTTATATTGTGTATGTCTATTTTGGATTGGAACAATAAAATGCAGCTACATATATCTCCAAGTTTGAGGCATGTTACTGTCCTTCCAGGCAAAGGACTTAAAGAGTTTATCAAAGTGAAAGTTGCGTCGAGGCGCCTTTCTTATAGGATGCTCTTCTATTCACTTTTGTTCTTCACTTTTCTTCTGAGGTTTGTGTTTGTTTTAACAGCTGTGGATGGCATTGATGGACAAAACAAGTGCTCTACCATAGGTACTCTCCCTCTTTTCTCTCTCACACACGCACACTTGCGCGCACACACATAGTCAGGTCGCCTTTAGTCACAATATCTCGCTTTCATCGCAGTTAGACTGTCAGAATAGTCTAATGATTCATATTTTAAACTCGGTAAATTAGATTTAAAAATTACGCATAATATGAATTCTCAAGTCACATTATGAATCATGAGATGATTACGCAGTTAGAAAGAAGGTTAGAATAGTTGAATAAATATTAGATGATTCATATTTTAAACTCGGTAAATTGAATTTCGAGACAATTCAAAATATGAATCATTTGATCTTCAATCAATGGTTCTGATTAAATAACTATAGTAATTATGTCACATTTTGGCCCTAAGGAATCTATTTCCTACATAGACAGAGTCACAAGCATGAACACATGTGTGAAGGTGGATAAGGCTTAAGTTTTCTATATATCAAAGCATGTTATTTTTTGCAAAGGCTTTGAACTTCTAATGATTTAAATAACTATTTTTGCTGCATCCAACCTCTAACAAATCAATAAAAATGTTACCGGCTTTTGATTTTAAAATCTTATCTGATACTCAGTTTGTTTATCTAATCAGAAAATGTACTACTATTTTTTTATGATTATCCCTCATCCTGCTACTGCAAGGTCCAGGTGAATCTGTAATAACAGACACATCAAACAATAATACAAATATCTAATAAAGATTCTTTATGTTATCACTTTTGTCAGAACTGTACTTTATGTATCTTGTACAATTAGAATAGTTACTGTTGGAGCAAGCTTGACCATAGAATAAAACTTTCCATTATAAAATAGATAAGGTTTTACAGCACAAATTCATAAGACCTTGCATATAATAAATTATATATAAGTCATTTTGACAATCCAAAACTTGTCTGTATTTTTATACGGTTGACAATTTAATAATAATTTTTCATCTCTCCTATAATGGAACTAAGACTTAATTTAGATCTATTTTCATATGGTATCGCAAACGTCGTCACATTTTGGTTGTTCAAATATCACTCATATTGTTATATCGGTTTATATATGACATTTTGATTAACTTCTAATTATATTTGCAGGTTGTCTAGGAAAAAAATTAGGGCCAAGGATTTTGGGTAGACGACCTGAATCAACTGTAATCTCTTAACTCTTCTGATAAGTTGAAAAATATTACCATTTTATTAAAAAATTTAATTATTTTACTTTGATTTTCTATTGGTGGCTGAAAATGACATGACTTTTTCATAGGTCCCAGAAGTGATATACCAAACTTTAGATGAACCAATTGGCAATGATGAACTAAAGGGAAGGTTTGATATTCCACAAACTTTAGAAGAGTTCATGGTTAAAATGAAGGAAGGTGGATATGATGCCAAAACATTTGCAGTTAAACTTAGAGAAATGGTACAAAAATGTCCTCTTCTTTTCCCCTGCGGTCACTGTTTGCACGCATTAACGCAATCAGCACATTTGTGACCGTTGGATTGAAATTGGACATTTCTCAATCCAACGGTCACCGATGTACTGACTGCTTGAATTCGTGTTATTGGTGACTGCATGGAATCCAAATTTGAAATAATTTTAATGATTTTCTTACACTTTTTCAAGTTGAAGTCTCAAATAATGATAAATGAACTGTTATTAGGTAACCCTTATGGAACAAAGGACTAGGTTGGCCAAAATCCAAGAGTATCTATATCGCCATGTAGCATCAAGCAGCATACCGAAACAACTTCATTGTCTTGACTTGAGATTAGCACATGAGCATACCAACAACGCAGCAGCACGCCTTCAGCTACCGTCTGCGGAACTAGTTCCTGCCCTTGTTGACAATTCCTATTACCATTTTGTTTTAGCCTCAGATAATGTGCTTGCTGCCTCGGTTGTTGCAACATCACTCGTTCGTAACTGTCTACGACCTAACAAGGTTGTTATACACATAATTACAGACCGAAAGACTTATTATCCCATGCAGGCTTGGTTCTCATTGCATCCTTTATCACCTGCTGTGATTGAGGTCAAGGCATTGCACCATTTTGATTGGTTTTCAAAGGGGAAGGTGCCTGTTTTAGAAGCAATGGAGAAAGATCAGAAGGTGCGGTCGCAGTTTAGGGGAGGTTCATCGGCTATAGTTGCGAATACATCTGAGAAGCCAAATGTTATTGCAGCAAAACTACAGGCACTTAGTCCCAAGTATAATTCAGTGATGAACCACATTCGGATACATCTACCCGAGGTAAAAGGGATAGCTAGCATAGCAAGTAAATCATTTTTGTTTTTTGATAGCTTATAACCAAATAAATGTTTTTGTGCCTGTGATGCTTATAACAATGACAATTTTTCATAACAGCTGTTTCCAAGTCTTAACAAGGTGGTCTTCCTCGACGATGACATTGTGATACAAACTGATCTTACACCTCTGTGGGACATTGACATGAATGGAAAAGTGAATGGAGCAGTGGAAACATGCAATGGAGAAGACAAGTTTGTGATGTCAAAAAGGTTGAAAAGTTATTTGAACTTTTCTCACCCTCTAATATCTAAAAATTTCAATCCCAACGAATGTGCTTGGGCCTACGGCATGAACATTTTTGATTTGGAGGCTTGGAGGAGGACCAATATAAGCAATACATATCATCATTGGGTTGCGCAGGTATGTTTGTATTACATTCTAAGGAAAATGGAATATGCATTGTGAGTATAATTTGATACTGACAGTGCATCTCCAAAGCCTTTTGTTTGAAAGAGCTTGGTTGTGCGACTCGAGCCTGTGAGGTCCAGTCACATGGCAGCAACTTCAATTGTTGCGCCAAGGCTCCCCTTCTACCATAATACAATAAAGACAAATGATAAAGAAAAGAGTCAAACAACATTTTCTATACTTCAAATATGTATTATAAATTTATAATTGAGTTTTCATAAAAGTGATAGCTATAGCATTGATATTTTCATTTTGATTTATGCAGAATATTAAATCAGACCTGAGTTTGTGGCAGCTAGGGACATTACCTCCTGGATTGATAGCATTTCATGGTCATGTCCACGTTATAGATCCTTTCTGGCATATGCTTGGATTGGGATATCAGGAAAATACAAATGTTGATGATGTTGAGAATGCTGGTGTCATCCATTTCAATGGCAGGGCAAAGCCATGGCTAGACATAGCTTTTCCAGAACTAAGATCATTGTGGACGAAATATGTCGACTTCTCAGATAAGTTCATTAAAAGCTGCAACATTAGAGCATGA
Protein sequence

>MS.gene031273.t1

MPDPNAKQAVDGIDGQNKCSTIGCLGKKLGPRILGRRPESTVPEVIYQTLDEPIGNDELKGRFDIPQTLEEFMVKMKEGGYDAKTFAVKLREMVTLMEQRTRLAKIQEYLYRHVASSSIPKQLHCLDLRLAHEHTNNAAARLQLPSAELVPALVDNSYYHFVLASDNVLAASVVATSLVRNCLRPNKVVIHIITDRKTYYPMQAWFSLHPLSPAVIEVKALHHFDWFSKGKVPVLEAMEKDQKVRSQFRGGSSAIVANTSEKPNVIAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVIQTDLTPLWDIDMNGKVNGAVETCNGEDKFVMSKRLKSYLNFSHPLISKNFNPNECAWAYGMNIFDLEAWRRTNISNTYHHWVAQNIKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTNVDDVENAGVIHFNGRAKPWLDIAFPELRSLWTKYVDFSDKFIKSCNIRA