Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031593.t1 | XP_024638558.1 | 98.3 | 424 | 7 | 0 | 1 | 424 | 1 | 424 | 1.30E-247 | 865.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031593.t1 | P46643 | 81.5 | 406 | 75 | 0 | 19 | 424 | 25 | 430 | 8.4e-203 | 707.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031593.t1 | G7JCN3 | 98.3 | 424 | 7 | 0 | 1 | 424 | 1 | 424 | 9.4e-248 | 865.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33167 | MS.gene031593 | PPI |
| MS.gene031593 | MS.gene016021 | PPI |
| MS.gene031593 | MS.gene060918 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031593.t1 | MTR_4g080140 | 98.349 | 424 | 7 | 0 | 1 | 424 | 1 | 424 | 0.0 | 877 |
| MS.gene031593.t1 | MTR_4g080130 | 88.706 | 425 | 36 | 3 | 1 | 424 | 1 | 414 | 0.0 | 783 |
| MS.gene031593.t1 | MTR_3g110065 | 51.378 | 399 | 192 | 1 | 25 | 421 | 16 | 414 | 9.57e-148 | 426 |
| MS.gene031593.t1 | MTR_3g110065 | 51.378 | 399 | 192 | 1 | 25 | 421 | 56 | 454 | 6.27e-147 | 426 |
| MS.gene031593.t1 | MTR_3g110065 | 51.330 | 376 | 181 | 1 | 25 | 398 | 56 | 431 | 3.34e-138 | 402 |
| MS.gene031593.t1 | MTR_1g013050 | 48.354 | 395 | 202 | 2 | 25 | 417 | 63 | 457 | 9.64e-136 | 397 |
| MS.gene031593.t1 | MTR_4g014910 | 54.167 | 48 | 22 | 0 | 296 | 343 | 24 | 71 | 5.31e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031593.t1 | AT2G30970 | 78.873 | 426 | 88 | 1 | 1 | 424 | 5 | 430 | 0.0 | 720 |
| MS.gene031593.t1 | AT2G30970 | 78.873 | 426 | 88 | 1 | 1 | 424 | 5 | 430 | 0.0 | 720 |
| MS.gene031593.t1 | AT5G19550 | 50.503 | 398 | 195 | 1 | 23 | 418 | 1 | 398 | 2.46e-147 | 425 |
| MS.gene031593.t1 | AT5G11520 | 51.741 | 402 | 192 | 1 | 25 | 424 | 47 | 448 | 3.18e-147 | 426 |
| MS.gene031593.t1 | AT1G62800 | 47.619 | 399 | 209 | 0 | 23 | 421 | 1 | 399 | 7.73e-138 | 400 |
| MS.gene031593.t1 | AT1G62800 | 47.382 | 401 | 209 | 1 | 23 | 421 | 1 | 401 | 2.67e-136 | 397 |
| MS.gene031593.t1 | AT4G31990 | 46.135 | 414 | 220 | 3 | 6 | 417 | 33 | 445 | 7.49e-134 | 392 |
| MS.gene031593.t1 | AT4G31990 | 46.135 | 414 | 220 | 3 | 6 | 417 | 33 | 445 | 7.49e-134 | 392 |
| MS.gene031593.t1 | AT4G31990 | 46.135 | 414 | 220 | 3 | 6 | 417 | 33 | 445 | 1.71e-133 | 392 |
| MS.gene031593.t1 | AT4G31990 | 47.342 | 395 | 206 | 2 | 25 | 417 | 46 | 440 | 2.76e-133 | 390 |
| MS.gene031593.t1 | AT1G62800 | 47.493 | 339 | 176 | 1 | 23 | 359 | 1 | 339 | 2.03e-112 | 333 |
Find 114 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGATGATGGTCATTTATT+AGG | 0.163800 | 4.3:+29064367 | MS.gene031593:CDS |
| GCTGCAGTTCAGGCTTTATC+TGG | 0.203926 | 4.3:+29063483 | MS.gene031593:CDS |
| AACTACACTACGAGAGAATT+TGG | 0.231543 | 4.3:+29065453 | MS.gene031593:CDS |
| ACTCCAACATTAACTTTGTT+TGG | 0.243943 | 4.3:-29061380 | None:intergenic |
| AAATCCAACCCTTTAGATTC+AGG | 0.281836 | 4.3:-29063791 | None:intergenic |
| TGGGAACTGGTATATAGATT+TGG | 0.284181 | 4.3:-29063560 | None:intergenic |
| TGGACTGATGGATGACATTA+AGG | 0.291323 | 4.3:+29063817 | MS.gene031593:CDS |
| AAAACTTGACTCACATGAAT+TGG | 0.295790 | 4.3:-29061783 | None:intergenic |
| ACGAGAGAATTTGGAAAATC+TGG | 0.306043 | 4.3:+29065462 | MS.gene031593:CDS |
| TAGTAACGGTATGTCTTTAT+TGG | 0.320777 | 4.3:-29063764 | None:intergenic |
| AGCCACAACTTCTTCAAGTC+TGG | 0.343190 | 4.3:-29064860 | None:intergenic |
| TACAGCAATCCACCTCTTCA+TGG | 0.366324 | 4.3:+29064806 | MS.gene031593:CDS |
| GAAGCAGAGAGGAGAATTGC+AGG | 0.369047 | 4.3:+29061757 | MS.gene031593:CDS |
| GGTTCATGTCTTCATGGTTC+AGG | 0.374384 | 4.3:+29061291 | MS.gene031593:CDS |
| GTCAAACGATCAACCTGTTC+TGG | 0.382951 | 4.3:-29065786 | None:intergenic |
| AATTATAACAGGGCGCATAT+CGG | 0.387711 | 4.3:+29061695 | MS.gene031593:intron |
| TGACTCGTAATGGTCGTATA+AGG | 0.390208 | 4.3:+29065829 | MS.gene031593:CDS |
| ATTACAGCCACCATAACATT+TGG | 0.393881 | 4.3:+29063726 | MS.gene031593:intron |
| GGGAACTGGTATATAGATTT+GGG | 0.398341 | 4.3:-29063559 | None:intergenic |
| TAAACGAATAGCTGCAGTTC+AGG | 0.408353 | 4.3:+29063473 | MS.gene031593:CDS |
| TCAACGGACAATTTCTCAAC+CGG | 0.420413 | 4.3:+29061249 | MS.gene031593:CDS |
| GAGCTAGGTTCATGTCTTCA+TGG | 0.420770 | 4.3:+29061285 | MS.gene031593:CDS |
| CATATTTACATGACTCGTAA+TGG | 0.427237 | 4.3:+29065819 | MS.gene031593:CDS |
| CAGCATCTCTCCAAATGTTA+TGG | 0.427253 | 4.3:-29063736 | None:intergenic |
| GACTTGGACCAGGTGGGAAC+TGG | 0.436048 | 4.3:-29063573 | None:intergenic |
| CTTGTCGTTTCAACTGTCCT+TGG | 0.436753 | 4.3:+29064833 | MS.gene031593:CDS |
| CAGTATGGCTGGTCTTAATA+CGG | 0.443084 | 4.3:+29065960 | MS.gene031593:intron |
| GAATCACTGAAGCTGGCATA+TGG | 0.444094 | 4.3:+29063426 | MS.gene031593:CDS |
| TACGATTGTTTGCAGGCTAA+AGG | 0.445469 | 4.3:+29064262 | MS.gene031593:intron |
| ATTATAACAGGGCGCATATC+GGG | 0.453076 | 4.3:+29061696 | MS.gene031593:intron |
| CGAGAGAATTTGGAAAATCT+GGG | 0.454321 | 4.3:+29065463 | MS.gene031593:CDS |
| GTTATGGCAGACCGCATCAT+TGG | 0.454392 | 4.3:+29065424 | MS.gene031593:CDS |
| TGGTATATAGATTTGGGTGT+TGG | 0.456286 | 4.3:-29063553 | None:intergenic |
| TGGATTGCTGTACATGGGTC+TGG | 0.465606 | 4.3:-29064795 | None:intergenic |
| TGCATTCAACTGAACCTGAT+TGG | 0.467234 | 4.3:-29065512 | None:intergenic |
| GCTTGTGCTCACAATCCTAC+TGG | 0.469061 | 4.3:+29064114 | MS.gene031593:CDS |
| AATCCAACCCTTTAGATTCA+GGG | 0.470231 | 4.3:-29063790 | None:intergenic |
| TCTCTCCATTGTTCTTCTGA+AGG | 0.474653 | 4.3:-29064144 | None:intergenic |
| CAGCGGGATGACACCAGAAC+AGG | 0.474884 | 4.3:+29065773 | MS.gene031593:CDS |
| GTTCAGGCTTTATCTGGGAC+TGG | 0.478849 | 4.3:+29063489 | MS.gene031593:CDS |
| TACTATCACCCTGAATCTAA+AGG | 0.480649 | 4.3:+29063782 | MS.gene031593:CDS |
| ACTATCACCCTGAATCTAAA+GGG | 0.481415 | 4.3:+29063783 | MS.gene031593:CDS |
| GGTATATAGATTTGGGTGTT+GGG | 0.481546 | 4.3:-29063552 | None:intergenic |
| TAGCTCCGGTGACGGAGCTC+CGG | 0.491236 | 4.3:-29061268 | None:intergenic |
| ACTCCGAGGATTGGATCCTT+AGG | 0.493438 | 4.3:-29061329 | None:intergenic |
| ATGGAATCACATAACCAATC+AGG | 0.493504 | 4.3:+29065498 | MS.gene031593:CDS |
| GCTTCGGTAACTCCGAGGAT+TGG | 0.504812 | 4.3:-29061338 | None:intergenic |
| GAGCAGGGAGTATCTTCCCA+TGG | 0.505060 | 4.3:+29063380 | MS.gene031593:intron |
| CTGATCCGCAAGAAAAGCTT+CGG | 0.505274 | 4.3:-29061354 | None:intergenic |
| ACCTAAGGCATCCAACTCTC+TGG | 0.511639 | 4.3:-29064429 | None:intergenic |
| GAACATCGAACCAGCTCCTA+AGG | 0.511927 | 4.3:+29061313 | MS.gene031593:CDS |
| CTGCAGTTCAGGCTTTATCT+GGG | 0.514039 | 4.3:+29063484 | MS.gene031593:CDS |
| CATGGGTGGAAGCATACATA+TGG | 0.514364 | 4.3:+29063398 | MS.gene031593:CDS |
| TGTTATCATGACAGTATGGC+TGG | 0.514770 | 4.3:+29065949 | MS.gene031593:intron |
| CTCAACCGGAGCTCCGTCAC+CGG | 0.515163 | 4.3:+29061263 | MS.gene031593:CDS |
| CATAACATTTGGAGAGATGC+TGG | 0.515488 | 4.3:+29063737 | MS.gene031593:CDS |
| TACGGGCAACGTTGGATATG+TGG | 0.515504 | 4.3:+29065978 | MS.gene031593:CDS |
| CATATGTATGCTTCCACCCA+TGG | 0.520422 | 4.3:-29063397 | None:intergenic |
| AGGATTGGATCCTTAGGAGC+TGG | 0.523663 | 4.3:-29061323 | None:intergenic |
| TCATTTCCCTTTGTTTGACA+TGG | 0.525399 | 4.3:+29064285 | MS.gene031593:CDS |
| GGTTCAAGAATCACTGAAGC+TGG | 0.525800 | 4.3:+29063419 | MS.gene031593:CDS |
| ATAGAGATGTAAAAGCCATC+AGG | 0.526430 | 4.3:+29064338 | MS.gene031593:CDS |
| AGTCCAAACAAAGTTAATGT+TGG | 0.529361 | 4.3:+29061377 | MS.gene031593:CDS |
| GGAGCTCCGTCACCGGAGCT+AGG | 0.531575 | 4.3:+29061270 | MS.gene031593:CDS |
| AGCAGGGAGTATCTTCCCAT+GGG | 0.532326 | 4.3:+29063381 | MS.gene031593:intron |
| AAGAGGTGGATTGCTGTACA+TGG | 0.536615 | 4.3:-29064801 | None:intergenic |
| AGCAGAAAGAAAGAACCGTC+TGG | 0.539208 | 4.3:-29064087 | None:intergenic |
| ATCCAGACTTGAAGAAGTTG+TGG | 0.545968 | 4.3:+29064858 | MS.gene031593:CDS |
| TCACCCTGAATCTAAAGGGT+TGG | 0.547557 | 4.3:+29063787 | MS.gene031593:CDS |
| ATCTGGGGTCTCCATTGCCA+TGG | 0.550492 | 4.3:+29065479 | MS.gene031593:CDS |
| GAGAAGATTGCGAATCGCCA+TGG | 0.553263 | 4.3:-29061228 | None:intergenic |
| GGACTGTATGGCCAGAGAGT+TGG | 0.555960 | 4.3:+29064418 | MS.gene031593:CDS |
| GGTATGCCATGTCAAACAAA+GGG | 0.556105 | 4.3:-29064291 | None:intergenic |
| AGAGATCTCTTCTCAAATGA+AGG | 0.556653 | 4.3:+29064164 | MS.gene031593:CDS |
| TTGGCATGTTCTGCTACAGC+GGG | 0.561910 | 4.3:+29065757 | MS.gene031593:CDS |
| GATTTCCACTAGCAAAACCT+TGG | 0.563864 | 4.3:-29064312 | None:intergenic |
| CTAACACATTCAAGAACCAC+AGG | 0.564027 | 4.3:-29061733 | None:intergenic |
| AGTATGGCTGGTCTTAATAC+GGG | 0.570434 | 4.3:+29065961 | MS.gene031593:intron |
| GCCAGAGAGTTGGATGCCTT+AGG | 0.572080 | 4.3:+29064428 | MS.gene031593:CDS |
| TCTGAAGGATCTACTCCAGT+AGG | 0.572848 | 4.3:-29064129 | None:intergenic |
| GGTCTTAATACGGGCAACGT+TGG | 0.573230 | 4.3:+29065970 | MS.gene031593:CDS |
| TGGTATGCCATGTCAAACAA+AGG | 0.578691 | 4.3:-29064292 | None:intergenic |
| GTTATGTGATTCCATGGCAA+TGG | 0.584912 | 4.3:-29065490 | None:intergenic |
| GCTCCTAAGGATCCAATCCT+CGG | 0.593427 | 4.3:+29061326 | MS.gene031593:CDS |
| TAGATTCAGGGTGATAGTAA+CGG | 0.595480 | 4.3:-29063778 | None:intergenic |
| TCTATATACCAGTTCCCACC+TGG | 0.597915 | 4.3:+29063565 | MS.gene031593:CDS |
| CATCTCTCCAAATGTTATGG+TGG | 0.599838 | 4.3:-29063733 | None:intergenic |
| TGATTGGTTATGTGATTCCA+TGG | 0.602248 | 4.3:-29065496 | None:intergenic |
| GTTGTGGCTTAAAGAAGTCA+AGG | 0.603954 | 4.3:+29064874 | MS.gene031593:CDS |
| ATTGGCATGTTCTGCTACAG+CGG | 0.606237 | 4.3:+29065756 | MS.gene031593:CDS |
| TAGATCCTTCAGAAGAACAA+TGG | 0.608072 | 4.3:+29064139 | MS.gene031593:CDS |
| TGAAGACATGAACCTAGCTC+CGG | 0.616606 | 4.3:-29061282 | None:intergenic |
| CATGAACCTAGCTCCGGTGA+CGG | 0.616630 | 4.3:-29061276 | None:intergenic |
| ATATGTATGCTTCCACCCAT+GGG | 0.618917 | 4.3:-29063396 | None:intergenic |
| GGCGCATATCGGGATGACAA+TGG | 0.620903 | 4.3:+29061706 | MS.gene031593:CDS |
| TTGTTTGACATGGCATACCA+AGG | 0.620915 | 4.3:+29064295 | MS.gene031593:CDS |
| ACGACAAGTGCTCCATGAAG+AGG | 0.624499 | 4.3:-29064818 | None:intergenic |
| AGATGATTCTGAGTTCATCA+AGG | 0.634967 | 4.3:+29063449 | MS.gene031593:CDS |
| ACAAGTGCTCCATGAAGAGG+TGG | 0.644744 | 4.3:-29064815 | None:intergenic |
| GAATACTGACTTGGACCAGG+TGG | 0.647698 | 4.3:-29063580 | None:intergenic |
| TAGTTCTCATTCCAATGATG+CGG | 0.649874 | 4.3:-29065435 | None:intergenic |
| ATTGAATACTGACTTGGACC+AGG | 0.652138 | 4.3:-29063583 | None:intergenic |
| AGGGAGTATCTTCCCATGGG+TGG | 0.652799 | 4.3:+29063384 | MS.gene031593:intron |
| AATACTGACTTGGACCAGGT+GGG | 0.664893 | 4.3:-29063579 | None:intergenic |
| GCGATTCGCAATCTTCTCAA+CGG | 0.664921 | 4.3:+29061233 | MS.gene031593:CDS |
| GGATGACAATGGAAAGCCTG+TGG | 0.668054 | 4.3:+29061717 | MS.gene031593:CDS |
| CGAAAATGAGAAACAAGCCG+TGG | 0.673088 | 4.3:+29064745 | MS.gene031593:CDS |
| GAGAGAATTTGGAAAATCTG+GGG | 0.676096 | 4.3:+29065464 | MS.gene031593:CDS |
| CTTACACAGAGTGCTCCAGA+CGG | 0.687623 | 4.3:+29064072 | MS.gene031593:intron |
| GAAAAGCTTCGGTAACTCCG+AGG | 0.698605 | 4.3:-29061343 | None:intergenic |
| AATGTGTTAGAGAAGCAGAG+AGG | 0.730380 | 4.3:+29061746 | MS.gene031593:CDS |
| AGAGGTGGATTGCTGTACAT+GGG | 0.738190 | 4.3:-29064800 | None:intergenic |
| TCTTCAAGTCTGGATCACCA+AGG | 0.760746 | 4.3:-29064850 | None:intergenic |
| TGTGGCTAACGCTATCAACG+AGG | 0.769825 | 4.3:+29065996 | MS.gene031593:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAACTTAATTTCTTA+TGG | + | chr4.3:29063209-29063228 | MS.gene031593:intron | 10.0% |
| !! | TAACAAAAAAAAATATTTGA+AGG | - | chr4.3:29061985-29062004 | None:intergenic | 10.0% |
| !! | TATATTAATATAGAATAACA+TGG | - | chr4.3:29065276-29065295 | None:intergenic | 10.0% |
| !!! | AAACTTTGAAATATTTTTTT+TGG | - | chr4.3:29062778-29062797 | None:intergenic | 10.0% |
| !!! | AAATAAATATTTGTTATTTG+TGG | - | chr4.3:29062205-29062224 | None:intergenic | 10.0% |
| !!! | AAATATATAATTTCTACTTT+TGG | + | chr4.3:29062271-29062290 | MS.gene031593:intron | 10.0% |
| !!! | TTTTTTCAACTTTATTTAAT+GGG | + | chr4.3:29062354-29062373 | MS.gene031593:intron | 10.0% |
| !! | AATAGTTGTTGTAATAATAA+TGG | + | chr4.3:29061891-29061910 | MS.gene031593:intron | 15.0% |
| !! | TGATTTACTAAATTTAAGAA+TGG | - | chr4.3:29065324-29065343 | None:intergenic | 15.0% |
| !!! | GTTTTTTCAACTTTATTTAA+TGG | + | chr4.3:29062353-29062372 | MS.gene031593:intron | 15.0% |
| !!! | TTAATATCATTTTAAAACAG+TGG | - | chr4.3:29063172-29063191 | None:intergenic | 15.0% |
| !! | AAAGATAGTAAATATTTGTG+GGG | + | chr4.3:29062611-29062630 | MS.gene031593:intron | 20.0% |
| !! | AATAATTAAAGTGAGACTAA+TGG | - | chr4.3:29064008-29064027 | None:intergenic | 20.0% |
| !! | AATATATAAGAAAAAGTCTG+AGG | - | chr4.3:29065181-29065200 | None:intergenic | 20.0% |
| !! | AATGATATGTATGTAAACAT+TGG | + | chr4.3:29064610-29064629 | MS.gene031593:intron | 20.0% |
| !! | ATTACAAGATCAATAATTCT+AGG | - | chr4.3:29063699-29063718 | None:intergenic | 20.0% |
| !! | CAAAGATAGTAAATATTTGT+GGG | + | chr4.3:29062610-29062629 | MS.gene031593:intron | 20.0% |
| !! | CAATCATATGCAAAAAATAT+GGG | + | chr4.3:29064397-29064416 | MS.gene031593:CDS | 20.0% |
| !! | CTAATACTAATCAATAAGAA+TGG | - | chr4.3:29064462-29064481 | None:intergenic | 20.0% |
| !! | CTTTAATTAATCTACAAGAA+TGG | + | chr4.3:29063080-29063099 | MS.gene031593:intron | 20.0% |
| !! | GCAAACCAATAAAAATTTAA+GGG | - | chr4.3:29062644-29062663 | None:intergenic | 20.0% |
| !! | TAAGAAATAACCAATTTAAG+AGG | - | chr4.3:29064056-29064075 | None:intergenic | 20.0% |
| !! | TCAAAGATAGTAAATATTTG+TGG | + | chr4.3:29062609-29062628 | MS.gene031593:intron | 20.0% |
| !! | TCAATCATATGCAAAAAATA+TGG | + | chr4.3:29064396-29064415 | MS.gene031593:CDS | 20.0% |
| !! | TGGATGAATTTCATTTATTA+TGG | - | chr4.3:29065138-29065157 | None:intergenic | 20.0% |
| !! | TGTCTTCTTAAATTATCATT+TGG | - | chr4.3:29065301-29065320 | None:intergenic | 20.0% |
| !!! | CATTCTTATTGATTAGTATT+AGG | + | chr4.3:29064460-29064479 | MS.gene031593:intron | 20.0% |
| !!! | TCTCACTTTTAGAAATATTT+TGG | - | chr4.3:29062869-29062888 | None:intergenic | 20.0% |
| !!! | TGTAATTTGTTTCTTTCTTT+AGG | + | chr4.3:29062533-29062552 | MS.gene031593:intron | 20.0% |
| !!! | TTAATGCTAACATTGATTTT+AGG | + | chr4.3:29061822-29061841 | MS.gene031593:intron | 20.0% |
| !!! | TTATACCATGAAGTTTTTTA+GGG | - | chr4.3:29064981-29065000 | None:intergenic | 20.0% |
| !!! | TTGATTTGCAAATTATAACA+GGG | + | chr4.3:29061685-29061704 | MS.gene031593:intron | 20.0% |
| !!! | TTTATACCATGAAGTTTTTT+AGG | - | chr4.3:29064982-29065001 | None:intergenic | 20.0% |
| !!! | TTTGATTTGCAAATTATAAC+AGG | + | chr4.3:29061684-29061703 | MS.gene031593:intron | 20.0% |
| !!! | TTTTCTTTGAGTTAACTTAA+CGG | - | chr4.3:29062311-29062330 | None:intergenic | 20.0% |
| ! | AAATCAATGGCAGTATTTAA+AGG | - | chr4.3:29063618-29063637 | None:intergenic | 25.0% |
| ! | AACCATAAAAATAAGAGAGA+AGG | - | chr4.3:29065602-29065621 | None:intergenic | 25.0% |
| ! | AACTCATAGTATAAGAGAAA+TGG | - | chr4.3:29065889-29065908 | None:intergenic | 25.0% |
| ! | ACCATAAAAATAAGAGAGAA+GGG | - | chr4.3:29065601-29065620 | None:intergenic | 25.0% |
| ! | AGAAAATGAACTTACATAGA+TGG | + | chr4.3:29065390-29065409 | MS.gene031593:intron | 25.0% |
| ! | AGCATCTAACTTTAGTTAAA+AGG | + | chr4.3:29062115-29062134 | MS.gene031593:intron | 25.0% |
| ! | ATTTGTGGAATTCTTAACAT+TGG | - | chr4.3:29062190-29062209 | None:intergenic | 25.0% |
| ! | CAATAAAAATTTAAGGGATG+CGG | - | chr4.3:29062638-29062657 | None:intergenic | 25.0% |
| ! | CATGTTAAAAGATAGAGTTA+TGG | - | chr4.3:29064557-29064576 | None:intergenic | 25.0% |
| ! | CGCAAACCAATAAAAATTTA+AGG | - | chr4.3:29062645-29062664 | None:intergenic | 25.0% |
| ! | CTTTCTGTTAGAAAAAAGTA+CGG | + | chr4.3:29062827-29062846 | MS.gene031593:intron | 25.0% |
| ! | TATATGTTATCATGACAGTA+TGG | + | chr4.3:29065945-29065964 | MS.gene031593:intron | 25.0% |
| ! | TTTGATATTTCGTAGATATC+TGG | + | chr4.3:29063673-29063692 | MS.gene031593:intron | 25.0% |
| !! | AAAAGTACGGATAATTAATC+AGG | + | chr4.3:29062840-29062859 | MS.gene031593:intron | 25.0% |
| !! | CAAAGTGTTAAAAACTTAGT+TGG | + | chr4.3:29065695-29065714 | MS.gene031593:intron | 25.0% |
| !! | TTTCTTTCTTTAGGTGTTTT+GGG | + | chr4.3:29062542-29062561 | MS.gene031593:intron | 25.0% |
| !! | TTTTTCCCTAAAAAACTTCA+TGG | + | chr4.3:29064973-29064992 | MS.gene031593:intron | 25.0% |
| !!! | CTCTTATTTTTATGGTTACT+TGG | + | chr4.3:29065605-29065624 | MS.gene031593:intron | 25.0% |
| !!! | TAATTGGTTTTGTAGAATGT+GGG | + | chr4.3:29062736-29062755 | MS.gene031593:intron | 25.0% |
| !!! | TTTTTTAGGGAAAAAAGCAA+AGG | - | chr4.3:29064968-29064987 | None:intergenic | 25.0% |
| AAAACTTGACTCACATGAAT+TGG | - | chr4.3:29061786-29061805 | None:intergenic | 30.0% | |
| AATGAAATTCATCCAATCCT+AGG | + | chr4.3:29065143-29065162 | MS.gene031593:intron | 30.0% | |
| ACATTGGACAAATGTTAACA+TGG | - | chr4.3:29062174-29062193 | None:intergenic | 30.0% | |
| ACTCCAACATTAACTTTGTT+TGG | - | chr4.3:29061383-29061402 | None:intergenic | 30.0% | |
| ACTCTTCTTACCTCTTAAAT+TGG | + | chr4.3:29064043-29064062 | MS.gene031593:intron | 30.0% | |
| AGTCATAAGTGTTATCTTTG+CGG | - | chr4.3:29064701-29064720 | None:intergenic | 30.0% | |
| AGTCCAAACAAAGTTAATGT+TGG | + | chr4.3:29061377-29061396 | MS.gene031593:CDS | 30.0% | |
| ATCATCAACAAAAATCCTGA+TGG | - | chr4.3:29064356-29064375 | None:intergenic | 30.0% | |
| ATGACCGAAATTCATAGTAA+CGG | + | chr4.3:29062711-29062730 | MS.gene031593:intron | 30.0% | |
| CATATTTACATGACTCGTAA+TGG | + | chr4.3:29065819-29065838 | MS.gene031593:CDS | 30.0% | |
| CCATAAAAATAAGAGAGAAG+GGG | - | chr4.3:29065600-29065619 | None:intergenic | 30.0% | |
| CGTACATAGAAACTTTAGTT+GGG | + | chr4.3:29062092-29062111 | MS.gene031593:intron | 30.0% | |
| GCACAGAAAATAAGAAAAAG+TGG | - | chr4.3:29065549-29065568 | None:intergenic | 30.0% | |
| GCAGTATTTAAAGGAAGATT+TGG | - | chr4.3:29063609-29063628 | None:intergenic | 30.0% | |
| GCATACTGCAGAATTATATA+TGG | - | chr4.3:29065007-29065026 | None:intergenic | 30.0% | |
| GTAGTGTAAAAAACTGTTTC+AGG | - | chr4.3:29063314-29063333 | None:intergenic | 30.0% | |
| TACTCCGTTACTATGAATTT+CGG | - | chr4.3:29062718-29062737 | None:intergenic | 30.0% | |
| TAGTAACGGTATGTCTTTAT+TGG | - | chr4.3:29063767-29063786 | None:intergenic | 30.0% | |
| TCTAAAAGTGAGAAGAAAAC+TGG | + | chr4.3:29062876-29062895 | MS.gene031593:intron | 30.0% | |
| TCTCTTATACTATGAGTTCT+TGG | + | chr4.3:29065891-29065910 | MS.gene031593:intron | 30.0% | |
| TCTTCTCAAATGAAGGTTAA+AGG | + | chr4.3:29064171-29064190 | MS.gene031593:intron | 30.0% | |
| TTACAGCTTATAGCACAAAT+AGG | + | chr4.3:29062921-29062940 | MS.gene031593:intron | 30.0% | |
| TTCTGTAGACTCAAAATCAA+TGG | - | chr4.3:29063631-29063650 | None:intergenic | 30.0% | |
| TTTCAGGAGAATGTTACTAA+GGG | - | chr4.3:29063298-29063317 | None:intergenic | 30.0% | |
| ! | ATTCATAGTAACGGAGTAAT+TGG | + | chr4.3:29062720-29062739 | MS.gene031593:intron | 30.0% |
| ! | ATTTGGATTGAATACTGACT+TGG | - | chr4.3:29063592-29063611 | None:intergenic | 30.0% |
| ! | CGCATCCCTTAAATTTTTAT+TGG | + | chr4.3:29062636-29062655 | MS.gene031593:intron | 30.0% |
| ! | GTTTCTTTCTTTAGGTGTTT+TGG | + | chr4.3:29062541-29062560 | MS.gene031593:intron | 30.0% |
| ! | TTTAAAACAGTGGCGATAAA+AGG | - | chr4.3:29063162-29063181 | None:intergenic | 30.0% |
| !! | ATCAGGATTTTTGTTGATGA+TGG | + | chr4.3:29064355-29064374 | MS.gene031593:CDS | 30.0% |
| !! | GTTGATGATGGTCATTTATT+AGG | + | chr4.3:29064367-29064386 | MS.gene031593:CDS | 30.0% |
| !!! | AGTATGCTATTTTTCTAAGG+TGG | + | chr4.3:29065020-29065039 | MS.gene031593:intron | 30.0% |
| !!! | CGTACTTTTTTCTAACAGAA+AGG | - | chr4.3:29062829-29062848 | None:intergenic | 30.0% |
| !!! | GTAATTGGTTTTGTAGAATG+TGG | + | chr4.3:29062735-29062754 | MS.gene031593:intron | 30.0% |
| !!! | TGCAGTATGCTATTTTTCTA+AGG | + | chr4.3:29065017-29065036 | MS.gene031593:intron | 30.0% |
| !!! | TTTCATGTGCCATTTTTTTG+TGG | + | chr4.3:29062388-29062407 | MS.gene031593:intron | 30.0% |
| AAAAGCAGCAGCAATAAAAC+AGG | - | chr4.3:29062582-29062601 | None:intergenic | 35.0% | |
| AAATCCAACCCTTTAGATTC+AGG | - | chr4.3:29063794-29063813 | None:intergenic | 35.0% | |
| AAATTACACCACACAAAGCA+AGG | - | chr4.3:29062521-29062540 | None:intergenic | 35.0% | |
| AACTACACTACGAGAGAATT+TGG | + | chr4.3:29065453-29065472 | MS.gene031593:CDS | 35.0% | |
| AAGAAGATGCTTAGTAGGTT+AGG | + | chr4.3:29062682-29062701 | MS.gene031593:intron | 35.0% | |
| AAGAATGGTATGAGATTGGA+CGG | + | chr4.3:29063095-29063114 | MS.gene031593:intron | 35.0% | |
| AAGAATGGTCTACTTACCTA+AGG | - | chr4.3:29064447-29064466 | None:intergenic | 35.0% | |
| AATCCAACCCTTTAGATTCA+GGG | - | chr4.3:29063793-29063812 | None:intergenic | 35.0% | |
| AATTATAACAGGGCGCATAT+CGG | + | chr4.3:29061695-29061714 | MS.gene031593:intron | 35.0% | |
| ACGAGAGAATTTGGAAAATC+TGG | + | chr4.3:29065462-29065481 | MS.gene031593:CDS | 35.0% | |
| ACGGTTAAGATCAATTACTG+CGG | + | chr4.3:29063114-29063133 | MS.gene031593:intron | 35.0% | |
| ACGTGATCACCACAAAAAAA+TGG | - | chr4.3:29062400-29062419 | None:intergenic | 35.0% | |
| ACTATCACCCTGAATCTAAA+GGG | + | chr4.3:29063783-29063802 | MS.gene031593:CDS | 35.0% | |
| AGAGATCTCTTCTCAAATGA+AGG | + | chr4.3:29064164-29064183 | MS.gene031593:CDS | 35.0% | |
| AGATGATTCTGAGTTCATCA+AGG | + | chr4.3:29063449-29063468 | MS.gene031593:CDS | 35.0% | |
| AGTTTGACATTGTAACCTCT+AGG | + | chr4.3:29063943-29063962 | MS.gene031593:intron | 35.0% | |
| ATACTATGAGTTCTTGGAGA+TGG | + | chr4.3:29065897-29065916 | MS.gene031593:intron | 35.0% | |
| ATAGAGATGTAAAAGCCATC+AGG | + | chr4.3:29064338-29064357 | MS.gene031593:CDS | 35.0% | |
| ATGCTTAGTAGGTTAGGTAT+TGG | + | chr4.3:29062688-29062707 | MS.gene031593:intron | 35.0% | |
| ATGGAATCACATAACCAATC+AGG | + | chr4.3:29065498-29065517 | MS.gene031593:CDS | 35.0% | |
| ATTACAGCCACCATAACATT+TGG | + | chr4.3:29063726-29063745 | MS.gene031593:intron | 35.0% | |
| CGAGAGAATTTGGAAAATCT+GGG | + | chr4.3:29065463-29065482 | MS.gene031593:CDS | 35.0% | |
| CTACAAGAATGGTATGAGAT+TGG | + | chr4.3:29063091-29063110 | MS.gene031593:intron | 35.0% | |
| CTAGAAAGAAGATGCTTAGT+AGG | + | chr4.3:29062677-29062696 | MS.gene031593:intron | 35.0% | |
| CTGTTAATCATTAGTGACTG+AGG | + | chr4.3:29065071-29065090 | MS.gene031593:intron | 35.0% | |
| CTGTTACTATTTGTGCAGAT+TGG | + | chr4.3:29065738-29065757 | MS.gene031593:intron | 35.0% | |
| GAGAGAATTTGGAAAATCTG+GGG | + | chr4.3:29065464-29065483 | MS.gene031593:CDS | 35.0% | |
| GAGTCATGTATAAAGTGTGT+CGG | - | chr4.3:29063870-29063889 | None:intergenic | 35.0% | |
| GCAAAAAATATGGGACTGTA+TGG | + | chr4.3:29064406-29064425 | MS.gene031593:CDS | 35.0% | |
| GCATGAATAAGTTGTAGCAA+CGG | + | chr4.3:29065365-29065384 | MS.gene031593:intron | 35.0% | |
| GCGTACATAGAAACTTTAGT+TGG | + | chr4.3:29062091-29062110 | MS.gene031593:intron | 35.0% | |
| GCTGTTCAACCAATTATGTT+AGG | - | chr4.3:29065228-29065247 | None:intergenic | 35.0% | |
| GGGAACTGGTATATAGATTT+GGG | - | chr4.3:29063562-29063581 | None:intergenic | 35.0% | |
| GGTATATAGATTTGGGTGTT+GGG | - | chr4.3:29063555-29063574 | None:intergenic | 35.0% | |
| GTTTCAGGAGAATGTTACTA+AGG | - | chr4.3:29063299-29063318 | None:intergenic | 35.0% | |
| GTTTGACATTGTAACCTCTA+GGG | + | chr4.3:29063944-29063963 | MS.gene031593:intron | 35.0% | |
| TACATAGATGGCTTCTTTAC+AGG | + | chr4.3:29065402-29065421 | MS.gene031593:intron | 35.0% | |
| TACTATCACCCTGAATCTAA+AGG | + | chr4.3:29063782-29063801 | MS.gene031593:CDS | 35.0% | |
| TACTATGAGTTCTTGGAGAT+GGG | + | chr4.3:29065898-29065917 | MS.gene031593:intron | 35.0% | |
| TAGATCCTTCAGAAGAACAA+TGG | + | chr4.3:29064139-29064158 | MS.gene031593:CDS | 35.0% | |
| TAGATTCAGGGTGATAGTAA+CGG | - | chr4.3:29063781-29063800 | None:intergenic | 35.0% | |
| TAGTTCTCATTCCAATGATG+CGG | - | chr4.3:29065438-29065457 | None:intergenic | 35.0% | |
| TCAAAAAGTAAGCCTAGGAT+TGG | - | chr4.3:29065158-29065177 | None:intergenic | 35.0% | |
| TGGGAACTGGTATATAGATT+TGG | - | chr4.3:29063563-29063582 | None:intergenic | 35.0% | |
| TGGTATATAGATTTGGGTGT+TGG | - | chr4.3:29063556-29063575 | None:intergenic | 35.0% | |
| TTAGTATTAGGCCAAAGAGT+TGG | + | chr4.3:29064472-29064491 | MS.gene031593:intron | 35.0% | |
| ! | ATGGCTTTTACATCTCTATC+TGG | - | chr4.3:29064337-29064356 | None:intergenic | 35.0% |
| ! | ATTTTACAACCGTCTTTGAC+GGG | - | chr4.3:29063983-29064002 | None:intergenic | 35.0% |
| ! | CATTTTACAACCGTCTTTGA+CGG | - | chr4.3:29063984-29064003 | None:intergenic | 35.0% |
| ! | GGGGAGTAAAACTTTTATAG+AGG | - | chr4.3:29064934-29064953 | None:intergenic | 35.0% |
| ! | TCATTTCCCTTTGTTTGACA+TGG | + | chr4.3:29064285-29064304 | MS.gene031593:CDS | 35.0% |
| ! | TCTAAAGGGTTGGATTTTTC+TGG | + | chr4.3:29063797-29063816 | MS.gene031593:CDS | 35.0% |
| ! | TGATTGGTTATGTGATTCCA+TGG | - | chr4.3:29065499-29065518 | None:intergenic | 35.0% |
| !! | CAATTGACTTTTTACAGCCA+CGG | - | chr4.3:29064765-29064784 | None:intergenic | 35.0% |
| !! | CATCTTCTTTCTAGCTAGTT+TGG | - | chr4.3:29062671-29062690 | None:intergenic | 35.0% |
| !! | CTATCTACTTTTGGTCTATG+AGG | + | chr4.3:29063902-29063921 | MS.gene031593:intron | 35.0% |
| !! | GCTGTGTTACTATCTACTTT+TGG | + | chr4.3:29063893-29063912 | MS.gene031593:intron | 35.0% |
| !! | TATTAGAAGCTTGTTGACCA+AGG | - | chr4.3:29063271-29063290 | None:intergenic | 35.0% |
| !!! | AGTTTGCTTTTTTGGTACGT+TGG | + | chr4.3:29062433-29062452 | MS.gene031593:intron | 35.0% |
| !!! | CCCCTTCTCTCTTATTTTTA+TGG | + | chr4.3:29065597-29065616 | MS.gene031593:intron | 35.0% |
| !!! | GCTATTTTTCTAAGGTGGAA+TGG | + | chr4.3:29065025-29065044 | MS.gene031593:intron | 35.0% |
| AAAAAAGCAAACTCAGCTGG+TGG | - | chr4.3:29062426-29062445 | None:intergenic | 40.0% | |
| AAAAAAGCAAAGGCTGTGAG+AGG | - | chr4.3:29064958-29064977 | None:intergenic | 40.0% | |
| AAGTTCTGTAAACCAGCTCA+AGG | - | chr4.3:29064654-29064673 | None:intergenic | 40.0% | |
| AATGTGTTAGAGAAGCAGAG+AGG | + | chr4.3:29061746-29061765 | MS.gene031593:CDS | 40.0% | |
| ACCAAAAAAGCAAACTCAGC+TGG | - | chr4.3:29062429-29062448 | None:intergenic | 40.0% | |
| ACCGTTTCAAATGTTTGAGC+AGG | + | chr4.3:29063364-29063383 | MS.gene031593:intron | 40.0% | |
| AGAACACTGCAACAACAAGT+AGG | - | chr4.3:29062472-29062491 | None:intergenic | 40.0% | |
| AGTAGTTCCAACCAACTCTT+TGG | - | chr4.3:29064486-29064505 | None:intergenic | 40.0% | |
| ATATGTATGCTTCCACCCAT+GGG | - | chr4.3:29063399-29063418 | None:intergenic | 40.0% | |
| ATCATTAGTGACTGAGGCTA+TGG | + | chr4.3:29065077-29065096 | MS.gene031593:intron | 40.0% | |
| ATCCAGACTTGAAGAAGTTG+TGG | + | chr4.3:29064858-29064877 | MS.gene031593:CDS | 40.0% | |
| ATTATAACAGGGCGCATATC+GGG | + | chr4.3:29061696-29061715 | MS.gene031593:intron | 40.0% | |
| CAGCATCTCTCCAAATGTTA+TGG | - | chr4.3:29063739-29063758 | None:intergenic | 40.0% | |
| CATAACATTTGGAGAGATGC+TGG | + | chr4.3:29063737-29063756 | MS.gene031593:CDS | 40.0% | |
| CATCTCTCCAAATGTTATGG+TGG | - | chr4.3:29063736-29063755 | None:intergenic | 40.0% | |
| CCCTGCTCAAACATTTGAAA+CGG | - | chr4.3:29063368-29063387 | None:intergenic | 40.0% | |
| CCGTTTCAAATGTTTGAGCA+GGG | + | chr4.3:29063365-29063384 | MS.gene031593:intron | 40.0% | |
| CTAACACATTCAAGAACCAC+AGG | - | chr4.3:29061736-29061755 | None:intergenic | 40.0% | |
| GATGGCTTCTTTACAGGTTA+TGG | + | chr4.3:29065408-29065427 | MS.gene031593:intron | 40.0% | |
| GATTTCCACTAGCAAAACCT+TGG | - | chr4.3:29064315-29064334 | None:intergenic | 40.0% | |
| GGTATGCCATGTCAAACAAA+GGG | - | chr4.3:29064294-29064313 | None:intergenic | 40.0% | |
| GTGCTTATTGTAGTTGCTTG+AGG | + | chr4.3:29065565-29065584 | MS.gene031593:intron | 40.0% | |
| GTTAACTTAACGGCACATGT+TGG | - | chr4.3:29062301-29062320 | None:intergenic | 40.0% | |
| GTTATGTGATTCCATGGCAA+TGG | - | chr4.3:29065493-29065512 | None:intergenic | 40.0% | |
| GTTGTGGCTTAAAGAAGTCA+AGG | + | chr4.3:29064874-29064893 | MS.gene031593:CDS | 40.0% | |
| TAAACGAATAGCTGCAGTTC+AGG | + | chr4.3:29063473-29063492 | MS.gene031593:CDS | 40.0% | |
| TACGATTGTTTGCAGGCTAA+AGG | + | chr4.3:29064262-29064281 | MS.gene031593:intron | 40.0% | |
| TACTTGGAGACCAAGTATCT+TGG | + | chr4.3:29065621-29065640 | MS.gene031593:intron | 40.0% | |
| TCAACGGACAATTTCTCAAC+CGG | + | chr4.3:29061249-29061268 | MS.gene031593:CDS | 40.0% | |
| TCATTGCTACGATTGTTTGC+AGG | + | chr4.3:29064255-29064274 | MS.gene031593:intron | 40.0% | |
| TCTATGTACGCACGAGATAA+AGG | - | chr4.3:29062082-29062101 | None:intergenic | 40.0% | |
| TCTCTCCATTGTTCTTCTGA+AGG | - | chr4.3:29064147-29064166 | None:intergenic | 40.0% | |
| TGACTCGTAATGGTCGTATA+AGG | + | chr4.3:29065829-29065848 | MS.gene031593:CDS | 40.0% | |
| TGAGGTCAAAAAGTAAGCCT+AGG | - | chr4.3:29065163-29065182 | None:intergenic | 40.0% | |
| TGCATTCAACTGAACCTGAT+TGG | - | chr4.3:29065515-29065534 | None:intergenic | 40.0% | |
| TGCGGCACATATTTAATGCT+CGG | + | chr4.3:29063132-29063151 | MS.gene031593:intron | 40.0% | |
| TGGTATGCCATGTCAAACAA+AGG | - | chr4.3:29064295-29064314 | None:intergenic | 40.0% | |
| TGTTATCATGACAGTATGGC+TGG | + | chr4.3:29065949-29065968 | MS.gene031593:intron | 40.0% | |
| TTGTAGAATGTGGGACTTGT+TGG | + | chr4.3:29062745-29062764 | MS.gene031593:intron | 40.0% | |
| TTGTTTGACATGGCATACCA+AGG | + | chr4.3:29064295-29064314 | MS.gene031593:CDS | 40.0% | |
| ! | AGAACAGTGTTGCTCTGTTA+TGG | - | chr4.3:29061522-29061541 | None:intergenic | 40.0% |
| ! | AGTTACCGAAGCTTTTCTTG+CGG | + | chr4.3:29061349-29061368 | MS.gene031593:CDS | 40.0% |
| ! | GAGAAGAAAACTGGTCTGTT+TGG | + | chr4.3:29062885-29062904 | MS.gene031593:intron | 40.0% |
| ! | GTTGGATTTTTCTGGACTGA+TGG | + | chr4.3:29063805-29063824 | MS.gene031593:CDS | 40.0% |
| ! | TATTAGGCCAAAGAGTTGGT+TGG | + | chr4.3:29064476-29064495 | MS.gene031593:intron | 40.0% |
| ! | TGAGCTGGTTTACAGAACTT+TGG | + | chr4.3:29064654-29064673 | MS.gene031593:intron | 40.0% |
| ! | TGGACTGATGGATGACATTA+AGG | + | chr4.3:29063817-29063836 | MS.gene031593:CDS | 40.0% |
| ! | TTTTCGCAAAGTAAGCTGCA+AGG | - | chr4.3:29064731-29064750 | None:intergenic | 40.0% |
| !! | AGTATGGCTGGTCTTAATAC+GGG | + | chr4.3:29065961-29065980 | MS.gene031593:intron | 40.0% |
| !! | ATTGAATACTGACTTGGACC+AGG | - | chr4.3:29063586-29063605 | None:intergenic | 40.0% |
| !! | CAGTATGGCTGGTCTTAATA+CGG | + | chr4.3:29065960-29065979 | MS.gene031593:intron | 40.0% |
| !! | TTTAGTTTGAAGCCTTGAGC+TGG | + | chr4.3:29064639-29064658 | MS.gene031593:intron | 40.0% |
| !!! | ACCAGCTGAGTTTGCTTTTT+TGG | + | chr4.3:29062425-29062444 | MS.gene031593:intron | 40.0% |
| !!! | AGGTGTTTTGGGATGATGTA+GGG | + | chr4.3:29062553-29062572 | MS.gene031593:intron | 40.0% |
| !!! | TAGGTGTTTTGGGATGATGT+AGG | + | chr4.3:29062552-29062571 | MS.gene031593:intron | 40.0% |
| AAGTATCTTGGTAGGGGAGA+GGG | + | chr4.3:29065633-29065652 | MS.gene031593:intron | 45.0% | |
| AGCAGAAAGAAAGAACCGTC+TGG | - | chr4.3:29064090-29064109 | None:intergenic | 45.0% | |
| AGCCACAACTTCTTCAAGTC+TGG | - | chr4.3:29064863-29064882 | None:intergenic | 45.0% | |
| AGGTCAAATCCCGTCAAAGA+CGG | + | chr4.3:29063971-29063990 | MS.gene031593:intron | 45.0% | |
| ATTGGCATGTTCTGCTACAG+CGG | + | chr4.3:29065756-29065775 | MS.gene031593:CDS | 45.0% | |
| CAAGGTAGGTCTGAATCTGA+TGG | - | chr4.3:29063253-29063272 | None:intergenic | 45.0% | |
| CATATGTATGCTTCCACCCA+TGG | - | chr4.3:29063400-29063419 | None:intergenic | 45.0% | |
| CATCAGATTCAGACCTACCT+TGG | + | chr4.3:29063251-29063270 | MS.gene031593:intron | 45.0% | |
| CGAAAATGAGAAACAAGCCG+TGG | + | chr4.3:29064745-29064764 | MS.gene031593:CDS | 45.0% | |
| CTGATCCGCAAGAAAAGCTT+CGG | - | chr4.3:29061357-29061376 | None:intergenic | 45.0% | |
| GAATCACTGAAGCTGGCATA+TGG | + | chr4.3:29063426-29063445 | MS.gene031593:CDS | 45.0% | |
| GAGACCAAGTATCTTGGTAG+GGG | + | chr4.3:29065627-29065646 | MS.gene031593:intron | 45.0% | |
| GAGCTAGGTTCATGTCTTCA+TGG | + | chr4.3:29061285-29061304 | MS.gene031593:CDS | 45.0% | |
| GCGATTCGCAATCTTCTCAA+CGG | + | chr4.3:29061233-29061252 | MS.gene031593:CDS | 45.0% | |
| GGAGACCAAGTATCTTGGTA+GGG | + | chr4.3:29065626-29065645 | MS.gene031593:intron | 45.0% | |
| GGTTCAAGAATCACTGAAGC+TGG | + | chr4.3:29063419-29063438 | MS.gene031593:CDS | 45.0% | |
| GGTTCATGTCTTCATGGTTC+AGG | + | chr4.3:29061291-29061310 | MS.gene031593:CDS | 45.0% | |
| GTCAAACGATCAACCTGTTC+TGG | - | chr4.3:29065789-29065808 | None:intergenic | 45.0% | |
| TACAGCAATCCACCTCTTCA+TGG | + | chr4.3:29064806-29064825 | MS.gene031593:CDS | 45.0% | |
| TCACCCTGAATCTAAAGGGT+TGG | + | chr4.3:29063787-29063806 | MS.gene031593:CDS | 45.0% | |
| TCACGATTCCTTGCTTTGTG+TGG | + | chr4.3:29062510-29062529 | MS.gene031593:intron | 45.0% | |
| TCTATATACCAGTTCCCACC+TGG | + | chr4.3:29063565-29063584 | MS.gene031593:CDS | 45.0% | |
| TCTGAAGGATCTACTCCAGT+AGG | - | chr4.3:29064132-29064151 | None:intergenic | 45.0% | |
| TCTTCAAGTCTGGATCACCA+AGG | - | chr4.3:29064853-29064872 | None:intergenic | 45.0% | |
| TGAAGACATGAACCTAGCTC+CGG | - | chr4.3:29061285-29061304 | None:intergenic | 45.0% | |
| TGGAGACCAAGTATCTTGGT+AGG | + | chr4.3:29065625-29065644 | MS.gene031593:intron | 45.0% | |
| ! | ATTGTAACCTCTAGGGACGA+AGG | + | chr4.3:29063951-29063970 | MS.gene031593:intron | 45.0% |
| ! | CATGGGTGGAAGCATACATA+TGG | + | chr4.3:29063398-29063417 | MS.gene031593:CDS | 45.0% |
| ! | CTGCAGTTCAGGCTTTATCT+GGG | + | chr4.3:29063484-29063503 | MS.gene031593:CDS | 45.0% |
| ! | CTTGTCGTTTCAACTGTCCT+TGG | + | chr4.3:29064833-29064852 | MS.gene031593:CDS | 45.0% |
| ! | GCATACCAAGGTTTTGCTAG+TGG | + | chr4.3:29064307-29064326 | MS.gene031593:CDS | 45.0% |
| !! | AAGAGGTGGATTGCTGTACA+TGG | - | chr4.3:29064804-29064823 | None:intergenic | 45.0% |
| !! | AATACTGACTTGGACCAGGT+GGG | - | chr4.3:29063582-29063601 | None:intergenic | 45.0% |
| !! | AGAAGCTTGTTGACCAAGGT+AGG | - | chr4.3:29063267-29063286 | None:intergenic | 45.0% |
| !! | AGAGGTGGATTGCTGTACAT+GGG | - | chr4.3:29064803-29064822 | None:intergenic | 45.0% |
| !!! | AAGTTTTTTTTTTTTTTTTT+TGG | + | chr4.3:29061799-29061818 | MS.gene031593:intron | 5.0% |
| AAAGCAAAGGCTGTGAGAGG+TGG | - | chr4.3:29064955-29064974 | None:intergenic | 50.0% | |
| AAGCAAAGGCTGTGAGAGGT+GGG | - | chr4.3:29064954-29064973 | None:intergenic | 50.0% | |
| ACAAGTGCTCCATGAAGAGG+TGG | - | chr4.3:29064818-29064837 | None:intergenic | 50.0% | |
| ACGACAAGTGCTCCATGAAG+AGG | - | chr4.3:29064821-29064840 | None:intergenic | 50.0% | |
| ACTCCGAGGATTGGATCCTT+AGG | - | chr4.3:29061332-29061351 | None:intergenic | 50.0% | |
| AGGATTGGATCCTTAGGAGC+TGG | - | chr4.3:29061326-29061345 | None:intergenic | 50.0% | |
| CAAGTATCTTGGTAGGGGAG+AGG | + | chr4.3:29065632-29065651 | MS.gene031593:intron | 50.0% | |
| CTCTCCCCTACCAAGATACT+TGG | - | chr4.3:29065634-29065653 | None:intergenic | 50.0% | |
| GAAAAGCTTCGGTAACTCCG+AGG | - | chr4.3:29061346-29061365 | None:intergenic | 50.0% | |
| GAACATCGAACCAGCTCCTA+AGG | + | chr4.3:29061313-29061332 | MS.gene031593:CDS | 50.0% | |
| GAAGCAGAGAGGAGAATTGC+AGG | + | chr4.3:29061757-29061776 | MS.gene031593:CDS | 50.0% | |
| GATTTGACCTTCGTCCCTAG+AGG | - | chr4.3:29063961-29063980 | None:intergenic | 50.0% | |
| GCTCCTAAGGATCCAATCCT+CGG | + | chr4.3:29061326-29061345 | MS.gene031593:CDS | 50.0% | |
| GCTTGTGCTCACAATCCTAC+TGG | + | chr4.3:29064114-29064133 | MS.gene031593:CDS | 50.0% | |
| GGATGACAATGGAAAGCCTG+TGG | + | chr4.3:29061717-29061736 | MS.gene031593:CDS | 50.0% | |
| GGTCTTAATACGGGCAACGT+TGG | + | chr4.3:29065970-29065989 | MS.gene031593:CDS | 50.0% | |
| GTTATGGCAGACCGCATCAT+TGG | + | chr4.3:29065424-29065443 | MS.gene031593:CDS | 50.0% | |
| TACGGGCAACGTTGGATATG+TGG | + | chr4.3:29065978-29065997 | MS.gene031593:CDS | 50.0% | |
| TGGATTGCTGTACATGGGTC+TGG | - | chr4.3:29064798-29064817 | None:intergenic | 50.0% | |
| TGTGGCTAACGCTATCAACG+AGG | + | chr4.3:29065996-29066015 | MS.gene031593:CDS | 50.0% | |
| TTGGCATGTTCTGCTACAGC+GGG | + | chr4.3:29065757-29065776 | MS.gene031593:CDS | 50.0% | |
| ! | ACCTAAGGCATCCAACTCTC+TGG | - | chr4.3:29064432-29064451 | None:intergenic | 50.0% |
| ! | CTTACACAGAGTGCTCCAGA+CGG | + | chr4.3:29064072-29064091 | MS.gene031593:intron | 50.0% |
| ! | GCTGCAGTTCAGGCTTTATC+TGG | + | chr4.3:29063483-29063502 | MS.gene031593:CDS | 50.0% |
| ! | GTTCAGGCTTTATCTGGGAC+TGG | + | chr4.3:29063489-29063508 | MS.gene031593:CDS | 50.0% |
| !! | AGCAGGGAGTATCTTCCCAT+GGG | + | chr4.3:29063381-29063400 | MS.gene031593:intron | 50.0% |
| !! | GAATACTGACTTGGACCAGG+TGG | - | chr4.3:29063583-29063602 | None:intergenic | 50.0% |
| AGCAAAGGCTGTGAGAGGTG+GGG | - | chr4.3:29064953-29064972 | None:intergenic | 55.0% | |
| CATGAACCTAGCTCCGGTGA+CGG | - | chr4.3:29061279-29061298 | None:intergenic | 55.0% | |
| GCCAGAGAGTTGGATGCCTT+AGG | + | chr4.3:29064428-29064447 | MS.gene031593:CDS | 55.0% | |
| GCTTCGGTAACTCCGAGGAT+TGG | - | chr4.3:29061341-29061360 | None:intergenic | 55.0% | |
| GGACTGTATGGCCAGAGAGT+TGG | + | chr4.3:29064418-29064437 | MS.gene031593:CDS | 55.0% | |
| GGCGCATATCGGGATGACAA+TGG | + | chr4.3:29061706-29061725 | MS.gene031593:CDS | 55.0% | |
| ! | ATCTGGGGTCTCCATTGCCA+TGG | + | chr4.3:29065479-29065498 | MS.gene031593:CDS | 55.0% |
| !! | AGGGAGTATCTTCCCATGGG+TGG | + | chr4.3:29063384-29063403 | MS.gene031593:intron | 55.0% |
| !! | GAGCAGGGAGTATCTTCCCA+TGG | + | chr4.3:29063380-29063399 | MS.gene031593:intron | 55.0% |
| CAGCGGGATGACACCAGAAC+AGG | + | chr4.3:29065773-29065792 | MS.gene031593:CDS | 60.0% | |
| GACTTGGACCAGGTGGGAAC+TGG | - | chr4.3:29063576-29063595 | None:intergenic | 60.0% | |
| CTCAACCGGAGCTCCGTCAC+CGG | + | chr4.3:29061263-29061282 | MS.gene031593:CDS | 65.0% | |
| !! | TAGCTCCGGTGACGGAGCTC+CGG | - | chr4.3:29061271-29061290 | None:intergenic | 65.0% |
| GGAGCTCCGTCACCGGAGCT+AGG | + | chr4.3:29061270-29061289 | MS.gene031593:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 29061230 | 29066035 | 29061230 | ID=MS.gene031593 |
| chr4.3 | mRNA | 29061230 | 29066035 | 29061230 | ID=MS.gene031593.t1;Parent=MS.gene031593 |
| chr4.3 | exon | 29061230 | 29061403 | 29061230 | ID=MS.gene031593.t1.exon1;Parent=MS.gene031593.t1 |
| chr4.3 | CDS | 29061230 | 29061403 | 29061230 | ID=cds.MS.gene031593.t1;Parent=MS.gene031593.t1 |
| chr4.3 | exon | 29061706 | 29061791 | 29061706 | ID=MS.gene031593.t1.exon2;Parent=MS.gene031593.t1 |
| chr4.3 | CDS | 29061706 | 29061791 | 29061706 | ID=cds.MS.gene031593.t1;Parent=MS.gene031593.t1 |
| chr4.3 | exon | 29063386 | 29063592 | 29063386 | ID=MS.gene031593.t1.exon3;Parent=MS.gene031593.t1 |
| chr4.3 | CDS | 29063386 | 29063592 | 29063386 | ID=cds.MS.gene031593.t1;Parent=MS.gene031593.t1 |
| chr4.3 | exon | 29063733 | 29063838 | 29063733 | ID=MS.gene031593.t1.exon4;Parent=MS.gene031593.t1 |
| chr4.3 | CDS | 29063733 | 29063838 | 29063733 | ID=cds.MS.gene031593.t1;Parent=MS.gene031593.t1 |
| chr4.3 | exon | 29064081 | 29064185 | 29064081 | ID=MS.gene031593.t1.exon5;Parent=MS.gene031593.t1 |
| chr4.3 | CDS | 29064081 | 29064185 | 29064081 | ID=cds.MS.gene031593.t1;Parent=MS.gene031593.t1 |
| chr4.3 | exon | 29064277 | 29064449 | 29064277 | ID=MS.gene031593.t1.exon6;Parent=MS.gene031593.t1 |
| chr4.3 | CDS | 29064277 | 29064449 | 29064277 | ID=cds.MS.gene031593.t1;Parent=MS.gene031593.t1 |
| chr4.3 | exon | 29064736 | 29064895 | 29064736 | ID=MS.gene031593.t1.exon7;Parent=MS.gene031593.t1 |
| chr4.3 | CDS | 29064736 | 29064895 | 29064736 | ID=cds.MS.gene031593.t1;Parent=MS.gene031593.t1 |
| chr4.3 | exon | 29065424 | 29065519 | 29065424 | ID=MS.gene031593.t1.exon8;Parent=MS.gene031593.t1 |
| chr4.3 | CDS | 29065424 | 29065519 | 29065424 | ID=cds.MS.gene031593.t1;Parent=MS.gene031593.t1 |
| chr4.3 | exon | 29065756 | 29065850 | 29065756 | ID=MS.gene031593.t1.exon9;Parent=MS.gene031593.t1 |
| chr4.3 | CDS | 29065756 | 29065850 | 29065756 | ID=cds.MS.gene031593.t1;Parent=MS.gene031593.t1 |
| chr4.3 | exon | 29065963 | 29066035 | 29065963 | ID=MS.gene031593.t1.exon10;Parent=MS.gene031593.t1 |
| chr4.3 | CDS | 29065963 | 29066035 | 29065963 | ID=cds.MS.gene031593.t1;Parent=MS.gene031593.t1 |
| Gene Sequence |
| Protein sequence |
