Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031698.t1 | XP_013456667.1 | 98.3 | 578 | 10 | 0 | 1 | 578 | 1 | 578 | 0.00E+00 | 1166.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031698.t1 | Q500V2 | 74.7 | 553 | 140 | 0 | 26 | 578 | 7 | 559 | 4.4e-255 | 881.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031698.t1 | A0A072UNS6 | 98.3 | 578 | 10 | 0 | 1 | 578 | 1 | 578 | 0.0e+00 | 1166.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene98045 | MS.gene031698 | PPI |
| MS.gene031698 | MS.gene045586 | PPI |
| MS.gene53889 | MS.gene031698 | PPI |
| MS.gene031698 | MS.gene05127 | PPI |
| MS.gene26246 | MS.gene031698 | PPI |
| MS.gene017247 | MS.gene031698 | PPI |
| MS.gene031698 | MS.gene009653 | PPI |
| MS.gene031698 | MS.gene049594 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031698.t1 | MTR_4g078525 | 98.270 | 578 | 10 | 0 | 1 | 578 | 1 | 578 | 0.0 | 1184 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031698.t1 | AT2G20650 | 74.549 | 554 | 141 | 0 | 25 | 578 | 6 | 559 | 0.0 | 868 |
| MS.gene031698.t1 | AT2G20650 | 74.549 | 554 | 141 | 0 | 25 | 578 | 6 | 559 | 0.0 | 868 |
| MS.gene031698.t1 | AT4G28370 | 73.905 | 548 | 143 | 0 | 31 | 578 | 15 | 562 | 0.0 | 853 |
| MS.gene031698.t1 | AT4G28370 | 73.905 | 548 | 143 | 0 | 31 | 578 | 15 | 562 | 0.0 | 853 |
| MS.gene031698.t1 | AT4G28370 | 73.905 | 548 | 143 | 0 | 31 | 578 | 15 | 562 | 0.0 | 853 |
| MS.gene031698.t1 | AT4G28370 | 73.905 | 548 | 143 | 0 | 31 | 578 | 15 | 562 | 0.0 | 853 |
Find 127 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATATTCCATTGTGAAAA+TGG | 0.178125 | 4.3:+30567357 | None:intergenic |
| TGCTTCTTGTATACTCCTTT+TGG | 0.190274 | 4.3:-30563597 | MS.gene031698:CDS |
| AATGCAACATCTATTAATAT+TGG | 0.258636 | 4.3:-30565365 | MS.gene031698:CDS |
| TCTATGCGCAAGAAGTTATT+AGG | 0.288385 | 4.3:+30563460 | None:intergenic |
| TCGTATGTCGCGAAGATTCT+TGG | 0.294194 | 4.3:+30565778 | None:intergenic |
| ACCATTCGAAGTTGTCTAAA+AGG | 0.305278 | 4.3:+30566221 | None:intergenic |
| TTGCATCCTCATTATATATT+AGG | 0.305463 | 4.3:-30563529 | MS.gene031698:CDS |
| GAATAGGTCTCAAATAATTA+TGG | 0.317946 | 4.3:+30563620 | None:intergenic |
| GGTTTATTTGGGGTTTGATA+TGG | 0.319781 | 4.3:-30568487 | MS.gene031698:CDS |
| CTGAGAAATACAGCTATTAT+AGG | 0.323696 | 4.3:-30563231 | MS.gene031698:CDS |
| GACAATGAGGCGTGAGCTTT+CGG | 0.325927 | 4.3:-30564060 | MS.gene031698:CDS |
| TCAAAGGTTGGAACTTTGTT+TGG | 0.339281 | 4.3:-30568451 | MS.gene031698:CDS |
| TGGTTGGTCTCAGACCATTA+AGG | 0.343879 | 4.3:-30568353 | MS.gene031698:CDS |
| AGATGCAATACCAGATGATA+TGG | 0.346387 | 4.3:+30565993 | None:intergenic |
| GAGGACTGTGTTTGGTTTGT+TGG | 0.349618 | 4.3:-30568400 | MS.gene031698:CDS |
| CCGTTGGTTCATTCCTCATC+AGG | 0.359239 | 4.3:-30563353 | MS.gene031698:intron |
| TGGAACTTTGTTTGGTTAAG+AGG | 0.359266 | 4.3:-30568443 | MS.gene031698:CDS |
| AAATAGAAGGTGTATATATA+TGG | 0.361668 | 4.3:-30566244 | MS.gene031698:CDS |
| TGCAAGTTCTTCTGTTGATT+CGG | 0.367604 | 4.3:-30565205 | MS.gene031698:CDS |
| TCAAAGCTGGTGTGTTTGTT+TGG | 0.372221 | 4.3:-30563431 | MS.gene031698:CDS |
| GGAGTGGGCGCCGACATGTT+GGG | 0.375370 | 4.3:+30562971 | None:intergenic |
| TCTTCTGTTGATTCGGCAAA+TGG | 0.378840 | 4.3:-30565198 | MS.gene031698:CDS |
| TTGGTTAAGAGGAAGAAATT+TGG | 0.381351 | 4.3:-30568432 | MS.gene031698:CDS |
| CGTGCAGATGGGATTCTGTT+GGG | 0.393304 | 4.3:-30563667 | MS.gene031698:intron |
| TGAGATATCTCCTTGCCATT+TGG | 0.404010 | 4.3:-30564121 | MS.gene031698:CDS |
| GGGAGTGGGCGCCGACATGT+TGG | 0.406657 | 4.3:+30562970 | None:intergenic |
| GATGTTGCATTTAATTGTAA+TGG | 0.416088 | 4.3:+30565377 | None:intergenic |
| GAGTATACAAGAAGCAGAAT+AGG | 0.422097 | 4.3:+30563604 | None:intergenic |
| AAGGTTTCAATAATAATGAT+TGG | 0.422296 | 4.3:-30564992 | MS.gene031698:CDS |
| CTATTATAGGAGGTCTTCTC+AGG | 0.426465 | 4.3:-30563218 | MS.gene031698:CDS |
| CAATGGCTCTTATAAATATC+CGG | 0.433438 | 4.3:-30566703 | MS.gene031698:CDS |
| TCGTGCAGATGGGATTCTGT+TGG | 0.435351 | 4.3:-30563668 | MS.gene031698:intron |
| ACACTGGCTGTTTACAAAGA+TGG | 0.438085 | 4.3:-30563014 | MS.gene031698:CDS |
| TCGACAACGAATACAATGTT+GGG | 0.440483 | 4.3:-30566280 | MS.gene031698:CDS |
| AGTACACCCACAAAGATAAC+TGG | 0.442208 | 4.3:-30566639 | MS.gene031698:CDS |
| CAAACACACCAGCTTTGATC+TGG | 0.444126 | 4.3:+30563436 | None:intergenic |
| CGCAGCTCCATTGCATGGCA+TGG | 0.453367 | 4.3:-30565637 | MS.gene031698:intron |
| TTTATCCAATCCATATCATC+TGG | 0.453904 | 4.3:-30566003 | MS.gene031698:intron |
| GGTTGGTCTCAGACCATTAA+GGG | 0.456895 | 4.3:-30568352 | MS.gene031698:CDS |
| TCTATTCATGCAGGTGGGAG+TGG | 0.458866 | 4.3:+30562955 | None:intergenic |
| CTCTCCGCAGCTCCATTGCA+TGG | 0.461451 | 4.3:-30565642 | MS.gene031698:intron |
| GATTGGTCAGCAAGCTATAG+TGG | 0.462232 | 4.3:-30564975 | MS.gene031698:CDS |
| ATTGAGTAACGGTGAAGGTT+GGG | 0.464692 | 4.3:-30564084 | MS.gene031698:CDS |
| TGATCGCGGCGTGAGATCAA+TGG | 0.473644 | 4.3:+30563156 | None:intergenic |
| GGTGCCCAAATCAAAATAGA+AGG | 0.476304 | 4.3:-30566257 | MS.gene031698:CDS |
| AGCAGTGAACTATACCTTGA+TGG | 0.476566 | 4.3:-30565327 | MS.gene031698:CDS |
| CTATAATAGCTGTATTTCTC+AGG | 0.483761 | 4.3:+30563232 | None:intergenic |
| TTTGGGGTTTGATATGGTTG+AGG | 0.487855 | 4.3:-30568481 | MS.gene031698:CDS |
| AGACCATTAAGGGATAAAAC+TGG | 0.488648 | 4.3:-30568342 | MS.gene031698:CDS |
| CGGATATTTATAAGAGCCAT+TGG | 0.490567 | 4.3:+30566704 | None:intergenic |
| TGGCCGACTTGCTTTCCAAA+TGG | 0.496019 | 4.3:+30564106 | None:intergenic |
| CAATACCAGATGATATGGAT+TGG | 0.498457 | 4.3:+30565998 | None:intergenic |
| GAGGGAGGGTTGAATCAAGA+TGG | 0.501959 | 4.3:-30566035 | MS.gene031698:CDS |
| TGTACACCAGTTATCTTTGT+GGG | 0.502285 | 4.3:+30566633 | None:intergenic |
| TTTCGAAAATCTATTCATGC+AGG | 0.509474 | 4.3:+30562946 | None:intergenic |
| ATGTACACCAGTTATCTTTG+TGG | 0.511877 | 4.3:+30566632 | None:intergenic |
| TTCGACAACGAATACAATGT+TGG | 0.512598 | 4.3:-30566281 | MS.gene031698:CDS |
| AACTTCGAATGGTAGCCAAC+AGG | 0.513880 | 4.3:-30566211 | MS.gene031698:intron |
| TGCCTTGTACATCTGACTGC+AGG | 0.514652 | 4.3:-30564941 | MS.gene031698:CDS |
| AACTGGTTCGTGGGGTGATG+AGG | 0.515337 | 4.3:-30568325 | MS.gene031698:intron |
| CTCCTTCTTCAGCATTACCT+CGG | 0.517795 | 4.3:-30563379 | MS.gene031698:CDS |
| AGCATTACCTCGGCTCCCGT+TGG | 0.520090 | 4.3:-30563369 | MS.gene031698:CDS |
| CATTGAGTAACGGTGAAGGT+TGG | 0.521281 | 4.3:-30564085 | MS.gene031698:CDS |
| CAACCTTCACCGTTACTCAA+TGG | 0.522376 | 4.3:+30564086 | None:intergenic |
| CTGACTGCAGGAATACTAGT+TGG | 0.525331 | 4.3:-30564929 | MS.gene031698:intron |
| AAGGGATAAAACTGGTTCGT+GGG | 0.528677 | 4.3:-30568334 | MS.gene031698:CDS |
| CGAAAATCTATTCATGCAGG+TGG | 0.532542 | 4.3:+30562949 | None:intergenic |
| TATACGAGAACTTACAGAAA+CGG | 0.540778 | 4.3:+30564027 | None:intergenic |
| AAGATGGATGGATATAAAGA+TGG | 0.541854 | 4.3:-30562998 | MS.gene031698:CDS |
| TGAGGTTGAAGCTCAAAGGT+TGG | 0.542993 | 4.3:-30568463 | MS.gene031698:CDS |
| CTATTCATGCAGGTGGGAGT+GGG | 0.545017 | 4.3:+30562956 | None:intergenic |
| GGAAAAGATGAAAGCGACAT+AGG | 0.545326 | 4.3:-30567381 | MS.gene031698:CDS |
| TCTCCTTGAATGCAGGGACG+TGG | 0.545387 | 4.3:-30566743 | MS.gene031698:intron |
| GCGTGAATCGCGAATAACAT+TGG | 0.548513 | 4.3:+30563558 | None:intergenic |
| AGCCGAGGTAATGCTGAAGA+AGG | 0.552624 | 4.3:+30563377 | None:intergenic |
| TCTGTTGTTTCTTAGTCCTG+TGG | 0.556711 | 4.3:-30568373 | MS.gene031698:CDS |
| TTTCAGACATGGTTTATTTG+GGG | 0.558043 | 4.3:-30568497 | None:intergenic |
| TTGTTTCTTAGTCCTGTGGT+TGG | 0.561209 | 4.3:-30568369 | MS.gene031698:CDS |
| CGCTTGTCATCGTCAAAACA+TGG | 0.564678 | 4.3:-30565576 | MS.gene031698:intron |
| TAAGGGATAAAACTGGTTCG+TGG | 0.568320 | 4.3:-30568335 | MS.gene031698:CDS |
| GACTTGCTTTCCAAATGGCA+AGG | 0.569481 | 4.3:+30564111 | None:intergenic |
| TATTAGGCATCACCGTTACT+CGG | 0.569856 | 4.3:-30563513 | MS.gene031698:CDS |
| TAACGTTGAAATTTCAGCAC+GGG | 0.570846 | 4.3:-30565604 | MS.gene031698:CDS |
| TGGTTGAGGTTGAAGCTCAA+AGG | 0.571090 | 4.3:-30568467 | MS.gene031698:CDS |
| AATATATAATGAGGATGCAA+TGG | 0.571419 | 4.3:+30563532 | None:intergenic |
| GATAATCTGAGGTATCCAAA+AGG | 0.571499 | 4.3:+30563582 | None:intergenic |
| AGAAATACAGCTATTATAGG+AGG | 0.580639 | 4.3:-30563228 | MS.gene031698:CDS |
| GGATACAAAGGTAACCATCA+AGG | 0.583380 | 4.3:+30565313 | None:intergenic |
| GCATAGAACCAGATCAAAGC+TGG | 0.586509 | 4.3:-30563444 | MS.gene031698:CDS |
| GTGATGCCTAATATATAATG+AGG | 0.587706 | 4.3:+30563523 | None:intergenic |
| TGGCTGTTTACAAAGATGGA+TGG | 0.588478 | 4.3:-30563010 | MS.gene031698:CDS |
| CTGATGAGGAATGAACCAAC+GGG | 0.590196 | 4.3:+30563354 | None:intergenic |
| GCCGCGATCAAATGATTGCA+TGG | 0.591420 | 4.3:-30563143 | MS.gene031698:intron |
| GAATGAACCAACGGGAGCCG+AGG | 0.603539 | 4.3:+30563362 | None:intergenic |
| CGACAACGAATACAATGTTG+GGG | 0.606610 | 4.3:-30566279 | MS.gene031698:CDS |
| GAGTTAGGCCCAACCTGATG+AGG | 0.609089 | 4.3:+30563340 | None:intergenic |
| TTGCCATTTGGAAAGCAAGT+CGG | 0.610192 | 4.3:-30564109 | MS.gene031698:CDS |
| ATTAATGGAAAGTCCGTCTG+TGG | 0.611025 | 4.3:-30565423 | MS.gene031698:CDS |
| GTGAAGGTTGGGAGACAATG+AGG | 0.611990 | 4.3:-30564073 | MS.gene031698:CDS |
| ATTCGTTGTCGAACACATCG+TGG | 0.612756 | 4.3:+30566291 | None:intergenic |
| AGTCCGTCTGTGGATGACGA+TGG | 0.615922 | 4.3:-30565413 | MS.gene031698:CDS |
| AACTGGTGTACATTATGTGC+AGG | 0.617157 | 4.3:-30566622 | MS.gene031698:intron |
| TGGGATTGCTAGCCGAGTAA+CGG | 0.619926 | 4.3:+30563501 | None:intergenic |
| CGGCCATTGAGTAACGGTGA+AGG | 0.622262 | 4.3:-30564089 | MS.gene031698:CDS |
| TTTGCAGCGGAAAAGAGGGA+GGG | 0.626633 | 4.3:-30566049 | MS.gene031698:intron |
| ATAACATTGGTGATAATCTG+AGG | 0.627178 | 4.3:+30563571 | None:intergenic |
| CCTGATGAGGAATGAACCAA+CGG | 0.627200 | 4.3:+30563353 | None:intergenic |
| GCAAGTCGGCCATTGAGTAA+CGG | 0.629580 | 4.3:-30564095 | MS.gene031698:CDS |
| GAAAATCTATTCATGCAGGT+GGG | 0.635768 | 4.3:+30562950 | None:intergenic |
| ATCTTTGTAAACAGCCAGTG+TGG | 0.635865 | 4.3:+30563016 | None:intergenic |
| CATGCAAATAACACAGTCCG+TGG | 0.639959 | 4.3:+30563183 | None:intergenic |
| AGATGGAGTGCCCAACATGT+CGG | 0.646036 | 4.3:-30562981 | MS.gene031698:CDS |
| TCAGGATACAAATCATGCCA+CGG | 0.646858 | 4.3:-30563200 | MS.gene031698:CDS |
| GGTTGCAAAAGCATTGAACA+AGG | 0.650400 | 4.3:+30564184 | None:intergenic |
| AGGGATAAAACTGGTTCGTG+GGG | 0.657670 | 4.3:-30568333 | MS.gene031698:CDS |
| TCTCCATCGTCATCCACAGA+CGG | 0.662192 | 4.3:+30565410 | None:intergenic |
| AACTACAAACTTGAAGAATG+CGG | 0.663491 | 4.3:+30564160 | None:intergenic |
| AATCTTCGCGACATACGATG+TGG | 0.666542 | 4.3:-30565773 | MS.gene031698:CDS |
| AATATAACTGGAACTTACAG+AGG | 0.666924 | 4.3:-30567342 | MS.gene031698:intron |
| TTCCTGCAGTCAGATGTACA+AGG | 0.671981 | 4.3:+30564939 | None:intergenic |
| GTAACGTTGAAATTTCAGCA+CGG | 0.682539 | 4.3:-30565605 | MS.gene031698:CDS |
| AATGGTCTGAGACCAACCAC+AGG | 0.684216 | 4.3:+30568357 | None:intergenic |
| GCAGATGGGATTCTGTTGGG+CGG | 0.690409 | 4.3:-30563664 | MS.gene031698:intron |
| ACCATGCAATCATTTGATCG+CGG | 0.704135 | 4.3:+30563142 | None:intergenic |
| TACAAACTTGAAGAATGCGG+CGG | 0.707572 | 4.3:+30564163 | None:intergenic |
| GACAACGAATACAATGTTGG+GGG | 0.738098 | 4.3:-30566278 | MS.gene031698:CDS |
| ATGCTGAAGAAGGAGAATTG+CGG | 0.740659 | 4.3:+30563387 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGGATTTATATTTAAA+TGG | - | chr4.3:30565921-30565940 | MS.gene031698:intron | 10.0% |
| !!! | ATATTTTTCTTTTAAAAAAG+TGG | - | chr4.3:30566797-30566816 | MS.gene031698:intron | 10.0% |
| !!! | GTGAAATTTAAAATAAAATT+TGG | + | chr4.3:30566311-30566330 | None:intergenic | 10.0% |
| !!! | TTAATTAGTTTATAGATATA+TGG | - | chr4.3:30566389-30566408 | MS.gene031698:intron | 10.0% |
| !! | AAAAAAAAATAAGTAACAAG+CGG | + | chr4.3:30566642-30566661 | None:intergenic | 15.0% |
| !! | CACAACTAAAAAAAAAAAAA+CGG | + | chr4.3:30563784-30563803 | None:intergenic | 15.0% |
| !!! | AAAAGAAAATTAGATCTTTT+AGG | - | chr4.3:30563860-30563879 | MS.gene031698:intron | 15.0% |
| !! | AAAATGTACTTAGATGTATT+TGG | - | chr4.3:30563603-30563622 | MS.gene031698:CDS | 20.0% |
| !! | AACAAATAATAAAGCAAAAC+AGG | + | chr4.3:30564915-30564934 | None:intergenic | 20.0% |
| !! | AAGGTTTCAATAATAATGAT+TGG | - | chr4.3:30566457-30566476 | MS.gene031698:intron | 20.0% |
| !! | AATATATTGAATGAATATGC+TGG | - | chr4.3:30566355-30566374 | MS.gene031698:intron | 20.0% |
| !! | AATGCAACATCTATTAATAT+TGG | - | chr4.3:30566084-30566103 | MS.gene031698:intron | 20.0% |
| !! | AATTGGATGTTGTAAATAAT+AGG | + | chr4.3:30566982-30567001 | None:intergenic | 20.0% |
| !! | ATGATTTAATGTCTTATAAG+GGG | - | chr4.3:30564276-30564295 | MS.gene031698:intron | 20.0% |
| !! | CAGATTAGAATAATATCAAT+AGG | - | chr4.3:30563468-30563487 | MS.gene031698:CDS | 20.0% |
| !! | CATGATTTAATGTCTTATAA+GGG | - | chr4.3:30564275-30564294 | MS.gene031698:intron | 20.0% |
| !! | GTTAAACAGTTTAAGAAATA+AGG | + | chr4.3:30567758-30567777 | None:intergenic | 20.0% |
| !! | TAGAATAAAACAAAACAATG+TGG | - | chr4.3:30563416-30563435 | MS.gene031698:CDS | 20.0% |
| !! | TAGTTTATACATAAACACTT+AGG | - | chr4.3:30567700-30567719 | MS.gene031698:intron | 20.0% |
| !! | TTAAACACTTTCTTATAGAT+GGG | - | chr4.3:30565977-30565996 | MS.gene031698:intron | 20.0% |
| !! | TTCAAATTAATTGCAGTATA+TGG | - | chr4.3:30567149-30567168 | MS.gene031698:intron | 20.0% |
| !! | TTTACAATTGAAGTAGAAAT+AGG | - | chr4.3:30565334-30565353 | MS.gene031698:CDS | 20.0% |
| !!! | AAATAGAAGGTGTATATATA+TGG | - | chr4.3:30565205-30565224 | MS.gene031698:CDS | 20.0% |
| !!! | CTTTGTTCAATAAGTTTTTT+TGG | - | chr4.3:30564643-30564662 | MS.gene031698:intron | 20.0% |
| !!! | GTTTGTTACGAAATATAAAA+AGG | + | chr4.3:30566921-30566940 | None:intergenic | 20.0% |
| !!! | TAAATAATAGGATCTAGAAT+AGG | + | chr4.3:30566970-30566989 | None:intergenic | 20.0% |
| !!! | TAAGAAAGTGTTTAACAAAT+TGG | + | chr4.3:30565972-30565991 | None:intergenic | 20.0% |
| !!! | TCAATAAGTTTTTTTGGAAT+GGG | - | chr4.3:30564649-30564668 | MS.gene031698:intron | 20.0% |
| !!! | TCTAATTTTCTTTTCATTTG+TGG | + | chr4.3:30563854-30563873 | None:intergenic | 20.0% |
| !!! | TCTTTTTCATGTTTTTATCA+GGG | - | chr4.3:30565123-30565142 | MS.gene031698:intron | 20.0% |
| !!! | TTCAATAAGTTTTTTTGGAA+TGG | - | chr4.3:30564648-30564667 | MS.gene031698:intron | 20.0% |
| ! | AAAATATTGAGATGAGAGTT+AGG | + | chr4.3:30568127-30568146 | None:intergenic | 25.0% |
| ! | AAACCGATATTTAATGTTTG+TGG | - | chr4.3:30563991-30564010 | MS.gene031698:intron | 25.0% |
| ! | AAATTTGGGAACATGATATT+TGG | - | chr4.3:30563378-30563397 | MS.gene031698:CDS | 25.0% |
| ! | AACCACATATCAACATTAAA+TGG | + | chr4.3:30563887-30563906 | None:intergenic | 25.0% |
| ! | AATAAGCATAAAACAGCTTA+TGG | + | chr4.3:30567592-30567611 | None:intergenic | 25.0% |
| ! | AATATATAATGAGGATGCAA+TGG | + | chr4.3:30567920-30567939 | None:intergenic | 25.0% |
| ! | AATGCAAATCAAAATACAAC+TGG | + | chr4.3:30563315-30563334 | None:intergenic | 25.0% |
| ! | AGCTCCTTAATGTATATATT+AGG | - | chr4.3:30566212-30566231 | MS.gene031698:CDS | 25.0% |
| ! | CACGTTATAGATTTAATCAA+TGG | - | chr4.3:30566328-30566347 | MS.gene031698:intron | 25.0% |
| ! | GAAAAACAAAGTTAGATTGT+TGG | + | chr4.3:30568180-30568199 | None:intergenic | 25.0% |
| ! | GAATAGGTCTCAAATAATTA+TGG | + | chr4.3:30567832-30567851 | None:intergenic | 25.0% |
| ! | GAGACCTAATATATACATTA+AGG | + | chr4.3:30566219-30566238 | None:intergenic | 25.0% |
| ! | GATGTTGCATTTAATTGTAA+TGG | + | chr4.3:30566075-30566094 | None:intergenic | 25.0% |
| ! | GCATGATTTAATGTCTTATA+AGG | - | chr4.3:30564274-30564293 | MS.gene031698:intron | 25.0% |
| ! | GTAATGAAAAAAGAAGTTCT+TGG | + | chr4.3:30564990-30565009 | None:intergenic | 25.0% |
| ! | GTTAAACACTTTCTTATAGA+TGG | - | chr4.3:30565976-30565995 | MS.gene031698:intron | 25.0% |
| ! | GTTAAAGAGAATATTGATGA+TGG | + | chr4.3:30566164-30566183 | None:intergenic | 25.0% |
| ! | GTTATATTCCATTGTGAAAA+TGG | + | chr4.3:30564095-30564114 | None:intergenic | 25.0% |
| ! | TAAAACAAAACAATGTGGTT+TGG | - | chr4.3:30563421-30563440 | MS.gene031698:CDS | 25.0% |
| ! | TAAACACTTTCTTATAGATG+GGG | - | chr4.3:30565978-30565997 | MS.gene031698:intron | 25.0% |
| ! | TAAGTAACCATTTATACAAC+TGG | + | chr4.3:30564221-30564240 | None:intergenic | 25.0% |
| ! | TCAAAAAAGTCTATTCAAAC+AGG | + | chr4.3:30567525-30567544 | None:intergenic | 25.0% |
| ! | TGATTTAATGTCTTATAAGG+GGG | - | chr4.3:30564277-30564296 | MS.gene031698:intron | 25.0% |
| ! | TTGCATCCTCATTATATATT+AGG | - | chr4.3:30567920-30567939 | MS.gene031698:intron | 25.0% |
| ! | TTGCCACAAACATTAAATAT+CGG | + | chr4.3:30563997-30564016 | None:intergenic | 25.0% |
| !! | ATTTTGTCCTGTTGTAAATT+TGG | - | chr4.3:30563363-30563382 | MS.gene031698:CDS | 25.0% |
| !! | TAATTTTCTTCTTCCCTTTT+TGG | - | chr4.3:30565745-30565764 | MS.gene031698:intron | 25.0% |
| !! | TTACATCCATTTTCTTGTAT+TGG | - | chr4.3:30564018-30564037 | MS.gene031698:intron | 25.0% |
| !! | TTTTCACAATGGAATATAAC+TGG | - | chr4.3:30564095-30564114 | MS.gene031698:CDS | 25.0% |
| !! | TTTTGTCCTGTTGTAAATTT+GGG | - | chr4.3:30563364-30563383 | MS.gene031698:CDS | 25.0% |
| !!! | AAAAAAGTGGATTTTCATCA+TGG | - | chr4.3:30566810-30566829 | MS.gene031698:intron | 25.0% |
| !!! | AAGTTTTTAGATACTACCAA+TGG | - | chr4.3:30564729-30564748 | MS.gene031698:intron | 25.0% |
| !!! | ACTTTTTTGAGCTTATCTAT+TGG | - | chr4.3:30567535-30567554 | MS.gene031698:intron | 25.0% |
| !!! | ATACACCTTCTATTTTGATT+TGG | + | chr4.3:30565200-30565219 | None:intergenic | 25.0% |
| !!! | CAAACATTAAATATCGGTTT+AGG | + | chr4.3:30563991-30564010 | None:intergenic | 25.0% |
| !!! | CTCTTTTTCATGTTTTTATC+AGG | - | chr4.3:30565122-30565141 | MS.gene031698:intron | 25.0% |
| !!! | CTTTTTCATGTTTTTATCAG+GGG | - | chr4.3:30565124-30565143 | MS.gene031698:intron | 25.0% |
| !!! | CTTTTTTGAGCTTATCTATT+GGG | - | chr4.3:30567536-30567555 | MS.gene031698:intron | 25.0% |
| !!! | GTGTTTTGACTTTATTGTTA+CGG | - | chr4.3:30563198-30563217 | MS.gene031698:CDS | 25.0% |
| !!! | GTTGTATTTTGATTTGCATT+AGG | - | chr4.3:30563315-30563334 | MS.gene031698:intron | 25.0% |
| !!! | GTTTGTTTGGTTTTATTTAC+TGG | - | chr4.3:30568031-30568050 | MS.gene031698:intron | 25.0% |
| !!! | TACACCTTCTATTTTGATTT+GGG | + | chr4.3:30565199-30565218 | None:intergenic | 25.0% |
| !!! | TGTTACTAGTAATGTTGTTT+TGG | - | chr4.3:30563269-30563288 | MS.gene031698:intron | 25.0% |
| !!! | TTTTTCATGTTTTTATCAGG+GGG | - | chr4.3:30565125-30565144 | MS.gene031698:intron | 25.0% |
| !!! | TTTTTTCAGTGGATTTTTTC+TGG | - | chr4.3:30564047-30564066 | MS.gene031698:CDS | 25.0% |
| !!! | TTTTTTTTAGTTGTGCACAT+TGG | - | chr4.3:30563789-30563808 | MS.gene031698:intron | 25.0% |
| AAAGTTAGATTGTTGGATGA+AGG | + | chr4.3:30568173-30568192 | None:intergenic | 30.0% | |
| AACTACAAACTTGAAGAATG+CGG | + | chr4.3:30567292-30567311 | None:intergenic | 30.0% | |
| AAGATGGATGGATATAAAGA+TGG | - | chr4.3:30568451-30568470 | MS.gene031698:CDS | 30.0% | |
| AAGTTACAATATGCTTACAC+TGG | + | chr4.3:30567056-30567075 | None:intergenic | 30.0% | |
| AATATAACTGGAACTTACAG+AGG | - | chr4.3:30564107-30564126 | MS.gene031698:CDS | 30.0% | |
| ACGATTCTTATATAACTGCA+GGG | - | chr4.3:30566427-30566446 | MS.gene031698:intron | 30.0% | |
| AGAAATACAGCTATTATAGG+AGG | - | chr4.3:30568221-30568240 | MS.gene031698:intron | 30.0% | |
| AGTACTCGAGTATTCTTTAT+CGG | - | chr4.3:30563569-30563588 | MS.gene031698:CDS | 30.0% | |
| ATGCTTAGTTGCTATATGTT+TGG | - | chr4.3:30565608-30565627 | MS.gene031698:CDS | 30.0% | |
| CAAGACATGTAAATGCAATA+AGG | + | chr4.3:30565295-30565314 | None:intergenic | 30.0% | |
| CAATGGCTCTTATAAATATC+CGG | - | chr4.3:30564746-30564765 | MS.gene031698:intron | 30.0% | |
| CTATAATAGCTGTATTTCTC+AGG | + | chr4.3:30568220-30568239 | None:intergenic | 30.0% | |
| CTGAGAAATACAGCTATTAT+AGG | - | chr4.3:30568218-30568237 | MS.gene031698:intron | 30.0% | |
| GAAGTATATCTAATGTACTG+GGG | - | chr4.3:30565356-30565375 | MS.gene031698:CDS | 30.0% | |
| GAATAAACTTAGAGCCAATT+TGG | - | chr4.3:30564432-30564451 | MS.gene031698:intron | 30.0% | |
| GACAACCAAAAACGTATAAT+GGG | + | chr4.3:30567970-30567989 | None:intergenic | 30.0% | |
| GACCATTTAATGTTGATATG+TGG | - | chr4.3:30563882-30563901 | MS.gene031698:intron | 30.0% | |
| GTAACTTTCTAATGTGTTCT+AGG | + | chr4.3:30567005-30567024 | None:intergenic | 30.0% | |
| GTGATGCCTAATATATAATG+AGG | + | chr4.3:30567929-30567948 | None:intergenic | 30.0% | |
| GTTGAAAAGTTTGTCCAAAT+TGG | + | chr4.3:30564449-30564468 | None:intergenic | 30.0% | |
| TAACACAGAGACAATAATGT+TGG | + | chr4.3:30566193-30566212 | None:intergenic | 30.0% | |
| TACGATAACATAGTGAGAAT+TGG | + | chr4.3:30563719-30563738 | None:intergenic | 30.0% | |
| TACGATTCTTATATAACTGC+AGG | - | chr4.3:30566426-30566445 | MS.gene031698:intron | 30.0% | |
| TATACGAGAACTTACAGAAA+CGG | + | chr4.3:30567425-30567444 | None:intergenic | 30.0% | |
| TCAACAACCAGTTGTATAAA+TGG | - | chr4.3:30564211-30564230 | MS.gene031698:intron | 30.0% | |
| TGAACCTTGAAATTGTTTGA+GGG | - | chr4.3:30563666-30563685 | MS.gene031698:intron | 30.0% | |
| TGGTTTAGATTCAATACCTT+TGG | - | chr4.3:30563902-30563921 | MS.gene031698:intron | 30.0% | |
| TTATAAGGGGGATATATGAT+TGG | - | chr4.3:30564289-30564308 | MS.gene031698:intron | 30.0% | |
| TTGGTTAAGAGGAAGAAATT+TGG | - | chr4.3:30563017-30563036 | MS.gene031698:CDS | 30.0% | |
| TTTATCCAATCCATATCATC+TGG | - | chr4.3:30565446-30565465 | MS.gene031698:CDS | 30.0% | |
| ! | AGGAAGTATATCTAATGTAC+TGG | - | chr4.3:30565354-30565373 | MS.gene031698:CDS | 30.0% |
| ! | ATAACATTGGTGATAATCTG+AGG | + | chr4.3:30567881-30567900 | None:intergenic | 30.0% |
| ! | GCATATTGTAACTTAGTTTG+CGG | - | chr4.3:30567062-30567081 | MS.gene031698:intron | 30.0% |
| ! | GCTATATAACTGGTTTCATA+AGG | - | chr4.3:30564861-30564880 | MS.gene031698:intron | 30.0% |
| ! | GGAAGAAATTTGGTATTTTG+CGG | - | chr4.3:30563027-30563046 | MS.gene031698:CDS | 30.0% |
| ! | GGAAGTATATCTAATGTACT+GGG | - | chr4.3:30565355-30565374 | MS.gene031698:CDS | 30.0% |
| !! | AAGAGAATATTGATGATGGA+AGG | + | chr4.3:30566160-30566179 | None:intergenic | 30.0% |
| !! | CCATTTATTTTTCTGATGTC+CGG | + | chr4.3:30564768-30564787 | None:intergenic | 30.0% |
| !! | TTCTAATGTGTTCTAGGAAT+TGG | + | chr4.3:30566999-30567018 | None:intergenic | 30.0% |
| !! | TTTGTTTTCTTCTTTTGCAG+CGG | - | chr4.3:30565387-30565406 | MS.gene031698:CDS | 30.0% |
| !!! | AAGTTTTGAAACAAGTGTCT+GGG | - | chr4.3:30566544-30566563 | MS.gene031698:intron | 30.0% |
| !!! | AGAATCAGGTTGAATTTTAG+TGG | - | chr4.3:30563535-30563554 | MS.gene031698:CDS | 30.0% |
| !!! | AGGTTGAATTTTAGTGGATT+AGG | - | chr4.3:30563541-30563560 | MS.gene031698:CDS | 30.0% |
| !!! | CTTTTTTTGAAGAGAGAATC+AGG | - | chr4.3:30563521-30563540 | MS.gene031698:CDS | 30.0% |
| !!! | TAAGTTTTGAAACAAGTGTC+TGG | - | chr4.3:30566543-30566562 | MS.gene031698:intron | 30.0% |
| !!! | TCTATGATCTGTGTTACTTT+TGG | - | chr4.3:30565565-30565584 | MS.gene031698:intron | 30.0% |
| !!! | TTAGAGAGCTTTTTTTCTGT+TGG | + | chr4.3:30565023-30565042 | None:intergenic | 30.0% |
| AAACACTTGTCAGACTGTTT+AGG | - | chr4.3:30567561-30567580 | MS.gene031698:intron | 35.0% | |
| AACAAGTTAGTAGTACAACG+CGG | + | chr4.3:30565776-30565795 | None:intergenic | 35.0% | |
| ACCATTCGAAGTTGTCTAAA+AGG | + | chr4.3:30565231-30565250 | None:intergenic | 35.0% | |
| AGACCATTAAGGGATAAAAC+TGG | - | chr4.3:30563107-30563126 | MS.gene031698:intron | 35.0% | |
| AGATGCAATACCAGATGATA+TGG | + | chr4.3:30565459-30565478 | None:intergenic | 35.0% | |
| ATATTACTCTCCTTGAATGC+AGG | - | chr4.3:30564699-30564718 | MS.gene031698:intron | 35.0% | |
| ATGAAGGCGAGTTAGTAAAA+AGG | + | chr4.3:30568157-30568176 | None:intergenic | 35.0% | |
| ATGTACACCAGTTATCTTTG+TGG | + | chr4.3:30564820-30564839 | None:intergenic | 35.0% | |
| ATTTACATGTCTTGCTCTGA+TGG | - | chr4.3:30565301-30565320 | MS.gene031698:intron | 35.0% | |
| CAATACCAGATGATATGGAT+TGG | + | chr4.3:30565454-30565473 | None:intergenic | 35.0% | |
| CAGTTTAAGAAATAAGGCAC+TGG | + | chr4.3:30567752-30567771 | None:intergenic | 35.0% | |
| CATGTTCCCAAATTTACAAC+AGG | + | chr4.3:30563373-30563392 | None:intergenic | 35.0% | |
| CCGGACATCAGAAAAATAAA+TGG | - | chr4.3:30564765-30564784 | MS.gene031698:intron | 35.0% | |
| CGATTCTTATATAACTGCAG+GGG | - | chr4.3:30566428-30566447 | MS.gene031698:intron | 35.0% | |
| CGGATATTTATAAGAGCCAT+TGG | + | chr4.3:30564748-30564767 | None:intergenic | 35.0% | |
| CTGAACCTTGAAATTGTTTG+AGG | - | chr4.3:30563665-30563684 | MS.gene031698:intron | 35.0% | |
| GAGATGTTGAGCTATATAAC+TGG | - | chr4.3:30564851-30564870 | MS.gene031698:intron | 35.0% | |
| GAGTATACAAGAAGCAGAAT+AGG | + | chr4.3:30567848-30567867 | None:intergenic | 35.0% | |
| GATTCTTATATAACTGCAGG+GGG | - | chr4.3:30566429-30566448 | MS.gene031698:intron | 35.0% | |
| GCAATGCCAATACAAGAAAA+TGG | + | chr4.3:30564027-30564046 | None:intergenic | 35.0% | |
| GGACAACCAAAAACGTATAA+TGG | + | chr4.3:30567971-30567990 | None:intergenic | 35.0% | |
| GTAACGTTGAAATTTCAGCA+CGG | - | chr4.3:30565844-30565863 | MS.gene031698:intron | 35.0% | |
| GTGTGGAAAAAATGATCACA+AGG | + | chr4.3:30568419-30568438 | None:intergenic | 35.0% | |
| TAACGTTGAAATTTCAGCAC+GGG | - | chr4.3:30565845-30565864 | MS.gene031698:intron | 35.0% | |
| TAGTTGCTATATGTTTGGCT+TGG | - | chr4.3:30565613-30565632 | MS.gene031698:CDS | 35.0% | |
| TATTACTCTCCTTGAATGCA+GGG | - | chr4.3:30564700-30564719 | MS.gene031698:intron | 35.0% | |
| TCAAAGGTTGGAACTTTGTT+TGG | - | chr4.3:30562998-30563017 | MS.gene031698:CDS | 35.0% | |
| TCGACAACGAATACAATGTT+GGG | - | chr4.3:30565169-30565188 | MS.gene031698:intron | 35.0% | |
| TCTACCCTCAAACAATTTCA+AGG | + | chr4.3:30563673-30563692 | None:intergenic | 35.0% | |
| TCTATGCGCAAGAAGTTATT+AGG | + | chr4.3:30567992-30568011 | None:intergenic | 35.0% | |
| TGTACACCAGTTATCTTTGT+GGG | + | chr4.3:30564819-30564838 | None:intergenic | 35.0% | |
| TTCGACAACGAATACAATGT+TGG | - | chr4.3:30565168-30565187 | MS.gene031698:intron | 35.0% | |
| TTTACATGTCTTGCTCTGAT+GGG | - | chr4.3:30565302-30565321 | MS.gene031698:intron | 35.0% | |
| ! | AACTGGTTTCATAAGGAAGT+TGG | - | chr4.3:30564868-30564887 | MS.gene031698:intron | 35.0% |
| ! | ACATAGGTCCATTTTCACAA+TGG | - | chr4.3:30564084-30564103 | MS.gene031698:CDS | 35.0% |
| ! | AGAAATTTGGTATTTTGCGG+AGG | - | chr4.3:30563030-30563049 | MS.gene031698:CDS | 35.0% |
| ! | ATTTTAGATTGATCGCGTTG+AGG | - | chr4.3:30564160-30564179 | MS.gene031698:CDS | 35.0% |
| ! | ATTTTCACTTCCCAAGCAAT+TGG | - | chr4.3:30564953-30564972 | MS.gene031698:CDS | 35.0% |
| ! | GACTTTATTGTTACGGATTG+TGG | - | chr4.3:30563205-30563224 | MS.gene031698:CDS | 35.0% |
| ! | GATAATCTGAGGTATCCAAA+AGG | + | chr4.3:30567870-30567889 | None:intergenic | 35.0% |
| ! | GCAATCCCATTATACGTTTT+TGG | - | chr4.3:30567962-30567981 | MS.gene031698:intron | 35.0% |
| ! | GCACTTCTGGAAAAAAATTG+AGG | + | chr4.3:30564568-30564587 | None:intergenic | 35.0% |
| ! | GGTTTATTTGGGGTTTGATA+TGG | - | chr4.3:30562962-30562981 | MS.gene031698:CDS | 35.0% |
| ! | GTTGAGGTATATTTTCAGTC+TGG | - | chr4.3:30564176-30564195 | MS.gene031698:CDS | 35.0% |
| ! | TGCAAGTTCTTCTGTTGATT+CGG | - | chr4.3:30566244-30566263 | MS.gene031698:CDS | 35.0% |
| ! | TGCTTCTTGTATACTCCTTT+TGG | - | chr4.3:30567852-30567871 | MS.gene031698:intron | 35.0% |
| ! | TGGAACTTTGTTTGGTTAAG+AGG | - | chr4.3:30563006-30563025 | MS.gene031698:CDS | 35.0% |
| ! | TTTTCAGCTGGAAGGATTAA+TGG | - | chr4.3:30566011-30566030 | MS.gene031698:CDS | 35.0% |
| !! | AAACAATGTGGTTTGGTCAA+AGG | - | chr4.3:30563428-30563447 | MS.gene031698:CDS | 35.0% |
| !! | AACAATGTGGTTTGGTCAAA+GGG | - | chr4.3:30563429-30563448 | MS.gene031698:CDS | 35.0% |
| !! | ATTGTAACTTAGTTTGCGGT+AGG | - | chr4.3:30567066-30567085 | MS.gene031698:intron | 35.0% |
| !! | CTTATTTTCATAAGCTCTCC+AGG | - | chr4.3:30567606-30567625 | MS.gene031698:intron | 35.0% |
| !! | GAACCAGTTTTATCCCTTAA+TGG | + | chr4.3:30563113-30563132 | None:intergenic | 35.0% |
| !! | GTTTAACTTTTCGTGCAGAT+GGG | - | chr4.3:30567771-30567790 | MS.gene031698:intron | 35.0% |
| !! | TAGTAAGATAAGAGCACTTC+TGG | + | chr4.3:30564581-30564600 | None:intergenic | 35.0% |
| !! | TGTTTAACTTTTCGTGCAGA+TGG | - | chr4.3:30567770-30567789 | MS.gene031698:intron | 35.0% |
| !! | TTGATGATGGAAGGATACAA+AGG | + | chr4.3:30566151-30566170 | None:intergenic | 35.0% |
| !! | TTTCTTCTTCCCTTTTTGGT+TGG | - | chr4.3:30565749-30565768 | MS.gene031698:intron | 35.0% |
| !!! | ATTAGGTGTCACTGTTTTCT+CGG | - | chr4.3:30563332-30563351 | MS.gene031698:intron | 35.0% |
| !!! | ATTGGCATTGCTTTTTTCAG+TGG | - | chr4.3:30564036-30564055 | MS.gene031698:intron | 35.0% |
| !!! | TGTGATCATTTTTTCCACAC+TGG | - | chr4.3:30568419-30568438 | MS.gene031698:CDS | 35.0% |
| AACTGGTGTACATTATGTGC+AGG | - | chr4.3:30564827-30564846 | MS.gene031698:intron | 40.0% | |
| AAGGCGAGTTAGTAAAAAGG+AGG | + | chr4.3:30568154-30568173 | None:intergenic | 40.0% | |
| ACAAGCGGAATTTGAATCAC+AGG | + | chr4.3:30566627-30566646 | None:intergenic | 40.0% | |
| ACACACCAACTGTTATATGC+AGG | - | chr4.3:30568388-30568407 | MS.gene031698:CDS | 40.0% | |
| ACCATGCAATCATTTGATCG+CGG | + | chr4.3:30568310-30568329 | None:intergenic | 40.0% | |
| ACTCATCATGTGTTTGCCAT+GGG | - | chr4.3:30567490-30567509 | MS.gene031698:intron | 40.0% | |
| AGCAGTGAACTATACCTTGA+TGG | - | chr4.3:30566122-30566141 | MS.gene031698:intron | 40.0% | |
| AGGTTGTAGGTTCACAATCA+TGG | - | chr4.3:30567086-30567105 | MS.gene031698:intron | 40.0% | |
| AGTACACCCACAAAGATAAC+TGG | - | chr4.3:30564810-30564829 | MS.gene031698:intron | 40.0% | |
| ATCTTTGTAAACAGCCAGTG+TGG | + | chr4.3:30568436-30568455 | None:intergenic | 40.0% | |
| ATGCTGAAGAAGGAGAATTG+CGG | + | chr4.3:30568065-30568084 | None:intergenic | 40.0% | |
| ATTAATGGAAAGTCCGTCTG+TGG | - | chr4.3:30566026-30566045 | MS.gene031698:CDS | 40.0% | |
| ATTGAGTAACGGTGAAGGTT+GGG | - | chr4.3:30567365-30567384 | MS.gene031698:CDS | 40.0% | |
| CGACAACGAATACAATGTTG+GGG | - | chr4.3:30565170-30565189 | MS.gene031698:intron | 40.0% | |
| CTATTATAGGAGGTCTTCTC+AGG | - | chr4.3:30568231-30568250 | MS.gene031698:intron | 40.0% | |
| CTCGACTGCAAATGAAAGTT+TGG | - | chr4.3:30565048-30565067 | MS.gene031698:intron | 40.0% | |
| GACAACGAATACAATGTTGG+GGG | - | chr4.3:30565171-30565190 | MS.gene031698:intron | 40.0% | |
| GAGTTCTCTGAGCGTTAATA+AGG | - | chr4.3:30565905-30565924 | MS.gene031698:intron | 40.0% | |
| GATGCATATTGTTCACCTGT+TGG | + | chr4.3:30565256-30565275 | None:intergenic | 40.0% | |
| GCAAGTAGAACCAATTGCTT+GGG | + | chr4.3:30564966-30564985 | None:intergenic | 40.0% | |
| GGAAAAGATGAAAGCGACAT+AGG | - | chr4.3:30564068-30564087 | MS.gene031698:CDS | 40.0% | |
| GGATACAAAGGTAACCATCA+AGG | + | chr4.3:30566139-30566158 | None:intergenic | 40.0% | |
| GGTGCCCAAATCAAAATAGA+AGG | - | chr4.3:30565192-30565211 | MS.gene031698:CDS | 40.0% | |
| TAACTGGAACTTACAGAGGT+TGG | - | chr4.3:30564111-30564130 | MS.gene031698:CDS | 40.0% | |
| TACAAACTTGAAGAATGCGG+CGG | + | chr4.3:30567289-30567308 | None:intergenic | 40.0% | |
| TACTCATCATGTGTTTGCCA+TGG | - | chr4.3:30567489-30567508 | MS.gene031698:intron | 40.0% | |
| TATTAGGCATCACCGTTACT+CGG | - | chr4.3:30567936-30567955 | MS.gene031698:intron | 40.0% | |
| TCAAAGCTGGTGTGTTTGTT+TGG | - | chr4.3:30568018-30568037 | MS.gene031698:intron | 40.0% | |
| TCAGGATACAAATCATGCCA+CGG | - | chr4.3:30568249-30568268 | MS.gene031698:intron | 40.0% | |
| TCCATTAGCAGTAGCACTAA+AGG | + | chr4.3:30563964-30563983 | None:intergenic | 40.0% | |
| TGAGATATCTCCTTGCCATT+TGG | - | chr4.3:30567328-30567347 | MS.gene031698:intron | 40.0% | |
| TGCAAGTAGAACCAATTGCT+TGG | + | chr4.3:30564967-30564986 | None:intergenic | 40.0% | |
| TGGCTGTTTACAAAGATGGA+TGG | - | chr4.3:30568439-30568458 | MS.gene031698:CDS | 40.0% | |
| TGGTAAAACAAAGTCCTCAG+AGG | + | chr4.3:30563932-30563951 | None:intergenic | 40.0% | |
| ! | ACACTGGCTGTTTACAAAGA+TGG | - | chr4.3:30568435-30568454 | MS.gene031698:CDS | 40.0% |
| ! | ACTTTTCAACGAGCACTAAC+AGG | - | chr4.3:30564459-30564478 | MS.gene031698:intron | 40.0% |
| ! | CATGATTCTTTTCAGCTGGA+AGG | - | chr4.3:30566003-30566022 | MS.gene031698:intron | 40.0% |
| ! | GCCTTTTAGACAACTTCGAA+TGG | - | chr4.3:30565227-30565246 | MS.gene031698:intron | 40.0% |
| ! | TAGGATCTAGAATAGGACAG+AGG | + | chr4.3:30566963-30566982 | None:intergenic | 40.0% |
| ! | TTCTTTTGCAGCGGAAAAGA+GGG | - | chr4.3:30565396-30565415 | MS.gene031698:CDS | 40.0% |
| ! | TTGCCATTTGGAAAGCAAGT+CGG | - | chr4.3:30567340-30567359 | MS.gene031698:intron | 40.0% |
| ! | TTGTTTCTTAGTCCTGTGGT+TGG | - | chr4.3:30563080-30563099 | MS.gene031698:intron | 40.0% |
| ! | TTTGGGGTTTGATATGGTTG+AGG | - | chr4.3:30562968-30562987 | MS.gene031698:CDS | 40.0% |
| ! | TTTTTCTCCATGCCATGCAA+TGG | + | chr4.3:30565822-30565841 | None:intergenic | 40.0% |
| !! | AAGGGATAAAACTGGTTCGT+GGG | - | chr4.3:30563115-30563134 | MS.gene031698:intron | 40.0% |
| !! | AGAAATAAGGCACTGGTTGT+TGG | + | chr4.3:30567745-30567764 | None:intergenic | 40.0% |
| !! | AGCACTAAAGGCATGTCTTT+TGG | + | chr4.3:30563952-30563971 | None:intergenic | 40.0% |
| !! | ATACCTTTGGAATTCCTCTG+AGG | - | chr4.3:30563915-30563934 | MS.gene031698:intron | 40.0% |
| !! | CACAGGTGAAAATTTTAGCG+AGG | + | chr4.3:30566610-30566629 | None:intergenic | 40.0% |
| !! | CTGTTTTTCATAAGCTCTCC+TGG | + | chr4.3:30567627-30567646 | None:intergenic | 40.0% |
| !! | GGTTGCAAAAGCATTGAACA+AGG | + | chr4.3:30567268-30567287 | None:intergenic | 40.0% |
| !! | TAAGGGATAAAACTGGTTCG+TGG | - | chr4.3:30563114-30563133 | MS.gene031698:intron | 40.0% |
| !! | TCTGTTGTTTCTTAGTCCTG+TGG | - | chr4.3:30563076-30563095 | MS.gene031698:intron | 40.0% |
| !! | TCTTCTGTTGATTCGGCAAA+TGG | - | chr4.3:30566251-30566270 | MS.gene031698:CDS | 40.0% |
| AACTTCGAATGGTAGCCAAC+AGG | - | chr4.3:30565238-30565257 | MS.gene031698:intron | 45.0% | |
| AATCTTCGCGACATACGATG+TGG | - | chr4.3:30565676-30565695 | MS.gene031698:intron | 45.0% | |
| AGTCCTCAGAGGAATTCCAA+AGG | + | chr4.3:30563921-30563940 | None:intergenic | 45.0% | |
| ATTCGTTGTCGAACACATCG+TGG | + | chr4.3:30565161-30565180 | None:intergenic | 45.0% | |
| CAACCTTCACCGTTACTCAA+TGG | + | chr4.3:30567366-30567385 | None:intergenic | 45.0% | |
| CATGCAAATAACACAGTCCG+TGG | + | chr4.3:30568269-30568288 | None:intergenic | 45.0% | |
| CATTGAGTAACGGTGAAGGT+TGG | - | chr4.3:30567364-30567383 | MS.gene031698:CDS | 45.0% | |
| CCTGATGAGGAATGAACCAA+CGG | + | chr4.3:30568099-30568118 | None:intergenic | 45.0% | |
| CGCTTGTCATCGTCAAAACA+TGG | - | chr4.3:30565873-30565892 | MS.gene031698:intron | 45.0% | |
| CGTCACCTGCATATAACAGT+TGG | + | chr4.3:30568396-30568415 | None:intergenic | 45.0% | |
| CTCATCATGTGTTTGCCATG+GGG | - | chr4.3:30567491-30567510 | MS.gene031698:intron | 45.0% | |
| CTCCTTCTTCAGCATTACCT+CGG | - | chr4.3:30568070-30568089 | MS.gene031698:intron | 45.0% | |
| CTGACTGCAGGAATACTAGT+TGG | - | chr4.3:30566520-30566539 | MS.gene031698:intron | 45.0% | |
| CTGATGAGGAATGAACCAAC+GGG | + | chr4.3:30568098-30568117 | None:intergenic | 45.0% | |
| CTTGATGTATCGCTCATCGT+TGG | - | chr4.3:30565481-30565500 | MS.gene031698:intron | 45.0% | |
| GCATAGAACCAGATCAAAGC+TGG | - | chr4.3:30568005-30568024 | MS.gene031698:intron | 45.0% | |
| GCGTGAATCGCGAATAACAT+TGG | + | chr4.3:30567894-30567913 | None:intergenic | 45.0% | |
| GGTTCATTCCTCATCAGGTT+GGG | - | chr4.3:30568101-30568120 | MS.gene031698:intron | 45.0% | |
| TCGTATGTCGCGAAGATTCT+TGG | + | chr4.3:30565674-30565693 | None:intergenic | 45.0% | |
| TGAGGTTGAAGCTCAAAGGT+TGG | - | chr4.3:30562986-30563005 | MS.gene031698:CDS | 45.0% | |
| TGGTTCATTCCTCATCAGGT+TGG | - | chr4.3:30568100-30568119 | MS.gene031698:intron | 45.0% | |
| TGGTTGAGGTTGAAGCTCAA+AGG | - | chr4.3:30562982-30563001 | MS.gene031698:CDS | 45.0% | |
| TTCCTGCAGTCAGATGTACA+AGG | + | chr4.3:30566513-30566532 | None:intergenic | 45.0% | |
| TTTGGTCAAAGGGCTAAAGG+TGG | - | chr4.3:30563439-30563458 | MS.gene031698:CDS | 45.0% | |
| ! | ATTTTGCGGAGGACTGTGTT+TGG | - | chr4.3:30563041-30563060 | MS.gene031698:CDS | 45.0% |
| ! | CAAACACACCAGCTTTGATC+TGG | + | chr4.3:30568016-30568035 | None:intergenic | 45.0% |
| ! | CTTCTTTTGCAGCGGAAAAG+AGG | - | chr4.3:30565395-30565414 | MS.gene031698:CDS | 45.0% |
| ! | GACTTGCTTTCCAAATGGCA+AGG | + | chr4.3:30567341-30567360 | None:intergenic | 45.0% |
| ! | GATTGGTCAGCAAGCTATAG+TGG | - | chr4.3:30566474-30566493 | MS.gene031698:intron | 45.0% |
| ! | GCCTTTAGTGCTACTGCTAA+TGG | - | chr4.3:30563960-30563979 | MS.gene031698:intron | 45.0% |
| ! | GGAGCATGATTCTTTTCAGC+TGG | - | chr4.3:30565999-30566018 | MS.gene031698:intron | 45.0% |
| ! | GTTACGGATTGTGGTAACTG+TGG | - | chr4.3:30563214-30563233 | MS.gene031698:CDS | 45.0% |
| !! | AGGGATAAAACTGGTTCGTG+GGG | - | chr4.3:30563116-30563135 | MS.gene031698:intron | 45.0% |
| !! | CTTAGTTTGCGGTAGGTTGT+AGG | - | chr4.3:30567073-30567092 | MS.gene031698:intron | 45.0% |
| !! | GAGGACTGTGTTTGGTTTGT+TGG | - | chr4.3:30563049-30563068 | MS.gene031698:intron | 45.0% |
| !! | GGTTGGTCTCAGACCATTAA+GGG | - | chr4.3:30563097-30563116 | MS.gene031698:intron | 45.0% |
| !! | TGGTTGGTCTCAGACCATTA+AGG | - | chr4.3:30563096-30563115 | MS.gene031698:intron | 45.0% |
| !! | TGGTTTGGTCAAAGGGCTAA+AGG | - | chr4.3:30563436-30563455 | MS.gene031698:CDS | 45.0% |
| !! | TTGGCTTGGTGTATACAGCT+TGG | - | chr4.3:30565627-30565646 | MS.gene031698:CDS | 45.0% |
| AAACAGGCCTTAAGACCCCA+TGG | + | chr4.3:30567509-30567528 | None:intergenic | 50.0% | |
| ACAACGCGGACCAACCAAAA+AGG | + | chr4.3:30565762-30565781 | None:intergenic | 50.0% | |
| AGCCGAGGTAATGCTGAAGA+AGG | + | chr4.3:30568075-30568094 | None:intergenic | 50.0% | |
| CAACGCGGACCAACCAAAAA+GGG | + | chr4.3:30565761-30565780 | None:intergenic | 50.0% | |
| CGTGCAGATGGGATTCTGTT+GGG | - | chr4.3:30567782-30567801 | MS.gene031698:intron | 50.0% | |
| GACAATGAGGCGTGAGCTTT+CGG | - | chr4.3:30567389-30567408 | MS.gene031698:CDS | 50.0% | |
| GAGGGAGGGTTGAATCAAGA+TGG | - | chr4.3:30565414-30565433 | MS.gene031698:CDS | 50.0% | |
| GCAAGTCGGCCATTGAGTAA+CGG | - | chr4.3:30567354-30567373 | MS.gene031698:CDS | 50.0% | |
| GCCGCGATCAAATGATTGCA+TGG | - | chr4.3:30568306-30568325 | MS.gene031698:intron | 50.0% | |
| GTGAAGGTTGGGAGACAATG+AGG | - | chr4.3:30567376-30567395 | MS.gene031698:CDS | 50.0% | |
| GTGTTTGCCATGGGGTCTTA+AGG | - | chr4.3:30567499-30567518 | MS.gene031698:intron | 50.0% | |
| TCGTGCAGATGGGATTCTGT+TGG | - | chr4.3:30567781-30567800 | MS.gene031698:intron | 50.0% | |
| TCTCCATCGTCATCCACAGA+CGG | + | chr4.3:30566042-30566061 | None:intergenic | 50.0% | |
| TGCCTTGTACATCTGACTGC+AGG | - | chr4.3:30566508-30566527 | MS.gene031698:intron | 50.0% | |
| TGGGATTGCTAGCCGAGTAA+CGG | + | chr4.3:30567951-30567970 | None:intergenic | 50.0% | |
| TTTGCAGCGGAAAAGAGGGA+GGG | - | chr4.3:30565400-30565419 | MS.gene031698:CDS | 50.0% | |
| ! | AATGGTCTGAGACCAACCAC+AGG | + | chr4.3:30563095-30563114 | None:intergenic | 50.0% |
| ! | AGATGGAGTGCCCAACATGT+CGG | - | chr4.3:30568468-30568487 | MS.gene031698:CDS | 50.0% |
| ! | TTTTGCAGCGGAAAAGAGGG+AGG | - | chr4.3:30565399-30565418 | MS.gene031698:CDS | 50.0% |
| !! | CCGTTGGTTCATTCCTCATC+AGG | - | chr4.3:30568096-30568115 | MS.gene031698:intron | 50.0% |
| !! | TGGCCGACTTGCTTTCCAAA+TGG | + | chr4.3:30567346-30567365 | None:intergenic | 50.0% |
| AGTCCGTCTGTGGATGACGA+TGG | - | chr4.3:30566036-30566055 | MS.gene031698:CDS | 55.0% | |
| ATGCAATGGAGCTGCGGAGA+GGG | + | chr4.3:30565808-30565827 | None:intergenic | 55.0% | |
| CATGCCATGCAATGGAGCTG+CGG | + | chr4.3:30565814-30565833 | None:intergenic | 55.0% | |
| CGGCCATTGAGTAACGGTGA+AGG | - | chr4.3:30567360-30567379 | MS.gene031698:CDS | 55.0% | |
| CTTCCACGTCCCTGCATTCA+AGG | + | chr4.3:30564712-30564731 | None:intergenic | 55.0% | |
| GAGTTAGGCCCAACCTGATG+AGG | + | chr4.3:30568112-30568131 | None:intergenic | 55.0% | |
| GCAGATGGGATTCTGTTGGG+CGG | - | chr4.3:30567785-30567804 | MS.gene031698:intron | 55.0% | |
| TCTCCTTGAATGCAGGGACG+TGG | - | chr4.3:30564706-30564725 | MS.gene031698:intron | 55.0% | |
| TGATCGCGGCGTGAGATCAA+TGG | + | chr4.3:30568296-30568315 | None:intergenic | 55.0% | |
| !! | AACTGGTTCGTGGGGTGATG+AGG | - | chr4.3:30563124-30563143 | MS.gene031698:intron | 55.0% |
| AGCATTACCTCGGCTCCCGT+TGG | - | chr4.3:30568080-30568099 | MS.gene031698:intron | 60.0% | |
| ATAACTGCAGGGGGCAGCGA+AGG | - | chr4.3:30566438-30566457 | MS.gene031698:intron | 60.0% | |
| CATGCAATGGAGCTGCGGAG+AGG | + | chr4.3:30565809-30565828 | None:intergenic | 60.0% | |
| CGCAGCTCCATTGCATGGCA+TGG | - | chr4.3:30565812-30565831 | MS.gene031698:intron | 60.0% | |
| CTCTCCGCAGCTCCATTGCA+TGG | - | chr4.3:30565807-30565826 | MS.gene031698:CDS | 60.0% | |
| GAATGAACCAACGGGAGCCG+AGG | + | chr4.3:30568090-30568109 | None:intergenic | 60.0% | |
| !! | GGAGTGGGCGCCGACATGTT+GGG | + | chr4.3:30568481-30568500 | None:intergenic | 65.0% |
| !! | GGGAGTGGGCGCCGACATGT+TGG | + | chr4.3:30568482-30568501 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 30562960 | 30568511 | 30562960 | ID=MS.gene031698 |
| chr4.3 | mRNA | 30562960 | 30568511 | 30562960 | ID=MS.gene031698.t1;Parent=MS.gene031698 |
| chr4.3 | exon | 30568326 | 30568511 | 30568326 | ID=MS.gene031698.t1.exon1;Parent=MS.gene031698.t1 |
| chr4.3 | CDS | 30568326 | 30568511 | 30568326 | ID=cds.MS.gene031698.t1;Parent=MS.gene031698.t1 |
| chr4.3 | exon | 30567343 | 30567415 | 30567343 | ID=MS.gene031698.t1.exon2;Parent=MS.gene031698.t1 |
| chr4.3 | CDS | 30567343 | 30567415 | 30567343 | ID=cds.MS.gene031698.t1;Parent=MS.gene031698.t1 |
| chr4.3 | exon | 30566623 | 30566750 | 30566623 | ID=MS.gene031698.t1.exon3;Parent=MS.gene031698.t1 |
| chr4.3 | CDS | 30566623 | 30566750 | 30566623 | ID=cds.MS.gene031698.t1;Parent=MS.gene031698.t1 |
| chr4.3 | exon | 30566212 | 30566327 | 30566212 | ID=MS.gene031698.t1.exon4;Parent=MS.gene031698.t1 |
| chr4.3 | CDS | 30566212 | 30566327 | 30566212 | ID=cds.MS.gene031698.t1;Parent=MS.gene031698.t1 |
| chr4.3 | exon | 30566004 | 30566064 | 30566004 | ID=MS.gene031698.t1.exon5;Parent=MS.gene031698.t1 |
| chr4.3 | CDS | 30566004 | 30566064 | 30566004 | ID=cds.MS.gene031698.t1;Parent=MS.gene031698.t1 |
| chr4.3 | exon | 30565760 | 30565826 | 30565760 | ID=MS.gene031698.t1.exon6;Parent=MS.gene031698.t1 |
| chr4.3 | CDS | 30565760 | 30565826 | 30565760 | ID=cds.MS.gene031698.t1;Parent=MS.gene031698.t1 |
| chr4.3 | exon | 30565577 | 30565654 | 30565577 | ID=MS.gene031698.t1.exon7;Parent=MS.gene031698.t1 |
| chr4.3 | CDS | 30565577 | 30565654 | 30565577 | ID=cds.MS.gene031698.t1;Parent=MS.gene031698.t1 |
| chr4.3 | exon | 30565319 | 30565476 | 30565319 | ID=MS.gene031698.t1.exon8;Parent=MS.gene031698.t1 |
| chr4.3 | CDS | 30565319 | 30565476 | 30565319 | ID=cds.MS.gene031698.t1;Parent=MS.gene031698.t1 |
| chr4.3 | exon | 30565178 | 30565237 | 30565178 | ID=MS.gene031698.t1.exon9;Parent=MS.gene031698.t1 |
| chr4.3 | CDS | 30565178 | 30565237 | 30565178 | ID=cds.MS.gene031698.t1;Parent=MS.gene031698.t1 |
| chr4.3 | exon | 30564930 | 30565023 | 30564930 | ID=MS.gene031698.t1.exon10;Parent=MS.gene031698.t1 |
| chr4.3 | CDS | 30564930 | 30565023 | 30564930 | ID=cds.MS.gene031698.t1;Parent=MS.gene031698.t1 |
| chr4.3 | exon | 30564042 | 30564209 | 30564042 | ID=MS.gene031698.t1.exon11;Parent=MS.gene031698.t1 |
| chr4.3 | CDS | 30564042 | 30564209 | 30564042 | ID=cds.MS.gene031698.t1;Parent=MS.gene031698.t1 |
| chr4.3 | exon | 30563354 | 30563682 | 30563354 | ID=MS.gene031698.t1.exon12;Parent=MS.gene031698.t1 |
| chr4.3 | CDS | 30563354 | 30563682 | 30563354 | ID=cds.MS.gene031698.t1;Parent=MS.gene031698.t1 |
| chr4.3 | exon | 30563144 | 30563260 | 30563144 | ID=MS.gene031698.t1.exon13;Parent=MS.gene031698.t1 |
| chr4.3 | CDS | 30563144 | 30563260 | 30563144 | ID=cds.MS.gene031698.t1;Parent=MS.gene031698.t1 |
| chr4.3 | exon | 30562960 | 30563061 | 30562960 | ID=MS.gene031698.t1.exon14;Parent=MS.gene031698.t1 |
| chr4.3 | CDS | 30562960 | 30563061 | 30562960 | ID=cds.MS.gene031698.t1;Parent=MS.gene031698.t1 |
| Gene Sequence |
| Protein sequence |
