Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031760.t1 | XP_003607418.2 | 95.1 | 527 | 17 | 3 | 1 | 524 | 1 | 521 | 7.50E-269 | 936 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031760.t1 | Q9LW77 | 75.8 | 413 | 96 | 3 | 1 | 410 | 1 | 412 | 4.0e-170 | 599.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031760.t1 | G7JSQ8 | 95.1 | 527 | 17 | 3 | 1 | 524 | 1 | 521 | 5.4e-269 | 936.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031760 | MS.gene052128 | PPI |
| MS.gene031760 | MS.gene31164 | PPI |
| MS.gene031760 | MS.gene30950 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031760.t1 | MTR_4g077800 | 96.531 | 490 | 11 | 1 | 1 | 490 | 1 | 484 | 0.0 | 984 |
| MS.gene031760.t1 | MTR_4g077800 | 94.497 | 527 | 20 | 3 | 1 | 524 | 1 | 521 | 0.0 | 982 |
| MS.gene031760.t1 | MTR_5g007710 | 72.826 | 552 | 114 | 7 | 1 | 529 | 1 | 539 | 0.0 | 786 |
| MS.gene031760.t1 | MTR_5g007710 | 84.901 | 404 | 59 | 1 | 1 | 404 | 1 | 402 | 0.0 | 726 |
| MS.gene031760.t1 | MTR_4g077703 | 94.937 | 79 | 4 | 0 | 412 | 490 | 25 | 103 | 1.11e-46 | 159 |
| MS.gene031760.t1 | MTR_3g007760 | 26.829 | 369 | 212 | 9 | 29 | 356 | 57 | 408 | 8.49e-27 | 114 |
| MS.gene031760.t1 | MTR_3g007760 | 27.077 | 325 | 189 | 8 | 62 | 345 | 57 | 374 | 1.25e-24 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031760.t1 | AT3G16090 | 63.916 | 521 | 153 | 7 | 1 | 516 | 1 | 491 | 0.0 | 649 |
| MS.gene031760.t1 | AT1G65040 | 71.496 | 421 | 117 | 2 | 1 | 418 | 1 | 421 | 0.0 | 636 |
| MS.gene031760.t1 | AT1G65040 | 68.409 | 421 | 107 | 3 | 1 | 418 | 1 | 398 | 0.0 | 597 |
| MS.gene031760.t1 | AT1G65040 | 70.358 | 307 | 88 | 2 | 115 | 418 | 44 | 350 | 9.55e-160 | 460 |
| MS.gene031760.t1 | AT1G65040 | 66.007 | 303 | 77 | 3 | 119 | 418 | 1 | 280 | 2.70e-141 | 410 |
| MS.gene031760.t1 | AT1G65040 | 72.314 | 242 | 64 | 2 | 180 | 418 | 1 | 242 | 2.86e-125 | 368 |
| MS.gene031760.t1 | AT1G65040 | 75.330 | 227 | 55 | 1 | 177 | 402 | 24 | 250 | 9.87e-125 | 365 |
| MS.gene031760.t1 | AT4G25230 | 27.869 | 366 | 219 | 8 | 4 | 330 | 20 | 379 | 2.09e-26 | 113 |
| MS.gene031760.t1 | AT4G25230 | 27.869 | 366 | 219 | 8 | 4 | 330 | 20 | 379 | 2.09e-26 | 113 |
| MS.gene031760.t1 | AT4G25230 | 27.869 | 366 | 219 | 8 | 4 | 330 | 20 | 379 | 2.09e-26 | 113 |
| MS.gene031760.t1 | AT5G51450 | 26.431 | 367 | 230 | 8 | 36 | 365 | 53 | 416 | 2.45e-21 | 98.2 |
| MS.gene031760.t1 | AT5G51450 | 26.431 | 367 | 230 | 8 | 36 | 365 | 53 | 416 | 2.82e-21 | 97.8 |
| MS.gene031760.t1 | AT5G01960 | 33.333 | 135 | 84 | 4 | 214 | 344 | 285 | 417 | 1.06e-12 | 70.5 |
| MS.gene031760.t1 | AT2G44581 | 39.241 | 79 | 43 | 2 | 265 | 339 | 44 | 121 | 4.72e-11 | 61.2 |
Find 109 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGTATATGTGCTTCTTTC+TGG | 0.129475 | 4.3:-31202322 | MS.gene031760:CDS |
| GTGTTCCTTTGCACTTAATA+AGG | 0.236769 | 4.3:-31201381 | MS.gene031760:CDS |
| CTATGTCAGTGACATGCTTA+TGG | 0.292617 | 4.3:-31202415 | MS.gene031760:CDS |
| ATTTGATTTATCAGAAACTA+TGG | 0.304267 | 4.3:-31201403 | MS.gene031760:intron |
| TCTAATAATGCTGAGCTTGA+TGG | 0.304456 | 4.3:-31198939 | MS.gene031760:CDS |
| GGGAGCTATACGAGACATTT+AGG | 0.314554 | 4.3:-31201360 | MS.gene031760:CDS |
| ACTCACGAATTAAGCTCTTC+AGG | 0.328266 | 4.3:+31201256 | None:intergenic |
| TCCAAGTAAAACGTGAAAAC+TGG | 0.366637 | 4.3:+31202372 | None:intergenic |
| AGCTCTTCAGGGGTTGCATC+TGG | 0.367949 | 4.3:+31201268 | None:intergenic |
| TTTGTGGCAGTTAACTAAAA+AGG | 0.379029 | 4.3:-31203437 | MS.gene031760:CDS |
| GCAAGCATGGAGGGAGGTTA+TGG | 0.389288 | 4.3:-31203368 | MS.gene031760:CDS |
| AATGCAATTGTACCTCGTTC+TGG | 0.389760 | 4.3:+31198751 | None:intergenic |
| TGAACCACTGATCTTTGAAC+CGG | 0.391156 | 4.3:+31198966 | None:intergenic |
| AAGAAGCACCAAACTGATCT+TGG | 0.399595 | 4.3:+31203489 | None:intergenic |
| CATGCAGCTCACATGACTTA+TGG | 0.401741 | 4.3:-31198807 | MS.gene031760:CDS |
| CTGGTTGTCCCATCAGAAAA+TGG | 0.403116 | 4.3:-31201021 | MS.gene031760:CDS |
| TGCAATTACTATCTTTAGAC+AGG | 0.408286 | 4.3:-31203335 | MS.gene031760:CDS |
| TACATTCCTTGCCATGGTTA+CGG | 0.408709 | 4.3:-31203302 | MS.gene031760:CDS |
| AAACCATTGCCGGATAAAAC+TGG | 0.409243 | 4.3:+31203524 | None:intergenic |
| AATCAAGGCTTTGCATTGGT+TGG | 0.413236 | 4.3:-31203269 | MS.gene031760:CDS |
| TGTTCCTTTGCACTTAATAA+GGG | 0.430405 | 4.3:-31201380 | MS.gene031760:CDS |
| AGCAACTTCCAAGATCAGTT+TGG | 0.433214 | 4.3:-31203497 | MS.gene031760:CDS |
| TACGGCACTCTTGTTAATCA+AGG | 0.437977 | 4.3:-31203284 | MS.gene031760:CDS |
| ATGTTCATTGCCTCCGATCA+TGG | 0.438328 | 4.3:-31201080 | MS.gene031760:CDS |
| CTCTATTACATTCCTTGCCA+TGG | 0.443815 | 4.3:-31203308 | MS.gene031760:CDS |
| CTCACGAATTAAGCTCTTCA+GGG | 0.447017 | 4.3:+31201257 | None:intergenic |
| ACTAGCAACCAAGCAGGCTT+CGG | 0.448334 | 4.3:-31203116 | MS.gene031760:CDS |
| GTTGCTAAATAAACCATTGC+CGG | 0.454510 | 4.3:+31203514 | None:intergenic |
| CATGCTTATGGAGGGGCAAT+GGG | 0.466130 | 4.3:-31202403 | MS.gene031760:CDS |
| ATTGCTTACCATGCAAAAGT+TGG | 0.470036 | 4.3:+31199676 | None:intergenic |
| CAACCAGTGCTCTGCAGGTA+GGG | 0.482864 | 4.3:+31201037 | None:intergenic |
| TGGGACAACCAGTGCTCTGC+AGG | 0.483896 | 4.3:+31201032 | None:intergenic |
| GGAGAAGAGGATGCATTCAT+TGG | 0.484782 | 4.3:+31198864 | None:intergenic |
| GGGTTCCTTCTTCTTCTCGA+TGG | 0.484834 | 4.3:-31203169 | MS.gene031760:CDS |
| GAAAATGGAACAACTGCTAC+GGG | 0.489223 | 4.3:-31201006 | MS.gene031760:CDS |
| ACATGCTTATGGAGGGGCAA+TGG | 0.490906 | 4.3:-31202404 | MS.gene031760:CDS |
| CTCATTAAGCCTCTCAACCT+CGG | 0.492729 | 4.3:+31203390 | None:intergenic |
| TGTTAATCAAGGCTTTGCAT+TGG | 0.492811 | 4.3:-31203273 | MS.gene031760:CDS |
| GATCGAAACCGAAGCCTGCT+TGG | 0.497383 | 4.3:+31203108 | None:intergenic |
| TTATGGAGAGGGATCCCAGC+TGG | 0.499178 | 4.3:-31198790 | MS.gene031760:CDS |
| TCTTAGTTTAATTGCCACTT+TGG | 0.499449 | 4.3:-31203578 | MS.gene031760:CDS |
| GCTCAAACTGAGGTTGGCGA+TGG | 0.505128 | 4.3:-31199793 | MS.gene031760:CDS |
| AGCTCAGCTCAAACTGAGGT+TGG | 0.506186 | 4.3:-31199799 | MS.gene031760:CDS |
| TGGCTACACTCTTTATCCCC+CGG | 0.506814 | 4.3:-31198985 | MS.gene031760:CDS |
| CTCAAACTGAGGTTGGCGAT+GGG | 0.510685 | 4.3:-31199792 | MS.gene031760:CDS |
| TCTCAAACTTACAGCTCCCC+TGG | 0.510823 | 4.3:-31199005 | MS.gene031760:intron |
| AAGAGAACAGGGGAAGGCAC+TGG | 0.518999 | 4.3:-31199823 | MS.gene031760:intron |
| CAAAAGCAGTTTGTGATCCC+TGG | 0.521828 | 4.3:-31198891 | MS.gene031760:CDS |
| GCTGCATGTGTTTGAGATTG+TGG | 0.525993 | 4.3:+31198822 | None:intergenic |
| ATGCGGTTGCAGACATATGC+GGG | 0.533450 | 4.3:-31203601 | MS.gene031760:CDS |
| TTTGGTGCTTCTTCTCAACA+TGG | 0.534645 | 4.3:-31203479 | MS.gene031760:CDS |
| ACAACCAGTGCTCTGCAGGT+AGG | 0.540446 | 4.3:+31201036 | None:intergenic |
| AGCTCCCTTATTAAGTGCAA+AGG | 0.546217 | 4.3:+31201376 | None:intergenic |
| AACTGAGGTTGGCGATGGGG+TGG | 0.547346 | 4.3:-31199788 | MS.gene031760:CDS |
| TTCGAGAAGCCGAGGTTGAG+AGG | 0.548154 | 4.3:-31203399 | MS.gene031760:CDS |
| TACCATGCAAAAGTTGGAGA+AGG | 0.548413 | 4.3:+31199682 | None:intergenic |
| ATGATATGTAATAGCCAAAG+TGG | 0.552176 | 4.3:+31203564 | None:intergenic |
| AAGCGCCATCGAGAAGAAGA+AGG | 0.552714 | 4.3:+31203164 | None:intergenic |
| TTGCCCTACCTGCAGAGCAC+TGG | 0.558354 | 4.3:-31201040 | MS.gene031760:CDS |
| GATGCATTCATTGGTCCACC+AGG | 0.558594 | 4.3:+31198873 | None:intergenic |
| GTCAGTGACATGCTTATGGA+GGG | 0.559139 | 4.3:-31202411 | MS.gene031760:CDS |
| AAATGGAACAACTGCTACGG+GGG | 0.559604 | 4.3:-31201004 | MS.gene031760:CDS |
| AGAAAATGGAACAACTGCTA+CGG | 0.562510 | 4.3:-31201007 | MS.gene031760:CDS |
| GAACCACTGATCTTTGAACC+GGG | 0.563320 | 4.3:+31198967 | None:intergenic |
| ATGACTTGATGCAGATGAAG+AGG | 0.563731 | 4.3:+31198159 | None:intergenic |
| GCATTTACTAGCAACCAAGC+AGG | 0.564264 | 4.3:-31203122 | MS.gene031760:CDS |
| GGAACATAGAAGCTTTGCAC+TGG | 0.568833 | 4.3:+31198843 | None:intergenic |
| GCTTAATGAGCAAGCATGGA+GGG | 0.570543 | 4.3:-31203377 | MS.gene031760:CDS |
| GAAGCTTTGCACTGGAGAAG+AGG | 0.582556 | 4.3:+31198851 | None:intergenic |
| ACCACTGATCTTTGAACCGG+GGG | 0.582606 | 4.3:+31198969 | None:intergenic |
| AGAGGCTTAATGAGCAAGCA+TGG | 0.584570 | 4.3:-31203381 | MS.gene031760:CDS |
| GCTGCCGCTCTAGCCATGAT+CGG | 0.589627 | 4.3:+31201067 | None:intergenic |
| CTCTTCACGACAGATGATGC+AGG | 0.590049 | 4.3:+31201143 | None:intergenic |
| TCACTTCTAACATGAATGAT+CGG | 0.592324 | 4.3:-31201294 | MS.gene031760:CDS |
| TATGGAGAGGGATCCCAGCT+GGG | 0.592564 | 4.3:-31198789 | MS.gene031760:CDS |
| TAAAGATAGTAATTGCAAAG+AGG | 0.597781 | 4.3:+31203341 | None:intergenic |
| GCCGCTCTAGCCATGATCGG+AGG | 0.598124 | 4.3:+31201070 | None:intergenic |
| TGGTTCTCTTCGAGAAGCCG+AGG | 0.599332 | 4.3:-31203407 | MS.gene031760:CDS |
| GGGGATAAAGAGTGTAGCCA+GGG | 0.600049 | 4.3:+31198988 | None:intergenic |
| TAACAAGAGTGCCGTAACCA+TGG | 0.600859 | 4.3:+31203291 | None:intergenic |
| GCCTCCGATCATGGCTAGAG+CGG | 0.604085 | 4.3:-31201071 | MS.gene031760:CDS |
| TGTCAGTGACATGCTTATGG+AGG | 0.609892 | 4.3:-31202412 | MS.gene031760:CDS |
| TGGCTTGTGATAATTTGAGT+CGG | 0.612752 | 4.3:-31199768 | MS.gene031760:CDS |
| TGGAAGCTCAGCTCAAACTG+AGG | 0.613121 | 4.3:-31199803 | MS.gene031760:CDS |
| GATGCGGTTGCAGACATATG+CGG | 0.622914 | 4.3:-31203602 | MS.gene031760:CDS |
| AACCACTGATCTTTGAACCG+GGG | 0.627402 | 4.3:+31198968 | None:intergenic |
| ACCATGCAAAAGTTGGAGAA+GGG | 0.628689 | 4.3:+31199683 | None:intergenic |
| CAGTCAGATGCTCATCGACA+AGG | 0.633181 | 4.3:-31200967 | MS.gene031760:intron |
| TCACGAATTAAGCTCTTCAG+GGG | 0.633545 | 4.3:+31201258 | None:intergenic |
| GCTCACATGACTTATGGAGA+GGG | 0.637860 | 4.3:-31198801 | MS.gene031760:CDS |
| AGCTCACATGACTTATGGAG+AGG | 0.638406 | 4.3:-31198802 | MS.gene031760:CDS |
| TCAAACTGAGGTTGGCGATG+GGG | 0.640483 | 4.3:-31199791 | MS.gene031760:CDS |
| TCAGTGACATGCTTATGGAG+GGG | 0.644546 | 4.3:-31202410 | MS.gene031760:CDS |
| AGAGTGCCGTAACCATGGCA+AGG | 0.651932 | 4.3:+31203296 | None:intergenic |
| TATCATGCATTTAACAGCAG+AGG | 0.656683 | 4.3:-31203547 | MS.gene031760:CDS |
| TGAGACAACACAGACACGGA+AGG | 0.658650 | 4.3:+31203214 | None:intergenic |
| TGTCGATGAGCATCTGACTG+TGG | 0.667132 | 4.3:+31200970 | None:intergenic |
| GGCTTAATGAGCAAGCATGG+AGG | 0.669584 | 4.3:-31203378 | MS.gene031760:CDS |
| AAGCAGTTTGTGATCCCTGG+TGG | 0.673279 | 4.3:-31198888 | MS.gene031760:CDS |
| AACTTGAGACAACACAGACA+CGG | 0.677279 | 4.3:+31203210 | None:intergenic |
| AATGGAACAACTGCTACGGG+GGG | 0.692034 | 4.3:-31201003 | MS.gene031760:CDS |
| GGGATAAAGAGTGTAGCCAG+GGG | 0.695029 | 4.3:+31198989 | None:intergenic |
| TAATGAGCAAGCATGGAGGG+AGG | 0.696339 | 4.3:-31203374 | MS.gene031760:CDS |
| AAAATGGAACAACTGCTACG+GGG | 0.697725 | 4.3:-31201005 | MS.gene031760:CDS |
| AAGTGATCTTACGATAACGT+AGG | 0.711084 | 4.3:+31201311 | None:intergenic |
| ATGCATTCATTGGTCCACCA+GGG | 0.712072 | 4.3:+31198874 | None:intergenic |
| TCAAACAAAACTCCAGAACG+AGG | 0.714394 | 4.3:-31198763 | MS.gene031760:intron |
| ACGTCAGTATCAGATAGCAG+AGG | 0.723649 | 4.3:-31198196 | MS.gene031760:CDS |
| ACTGCAAAGAAGCTTCTATG+CGG | 0.744439 | 4.3:-31201114 | MS.gene031760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAATAAACATTAGAAA+AGG | + | chr4.3:31203245-31203264 | None:intergenic | 10.0% |
| !! | TATGAATAAAAAAAATTAAC+GGG | + | chr4.3:31201349-31201368 | None:intergenic | 10.0% |
| !!! | CAATATGTTATTTTTTAATT+CGG | + | chr4.3:31199800-31199819 | None:intergenic | 10.0% |
| !!! | TCAATTTTTATTTTGTATAT+AGG | - | chr4.3:31203052-31203071 | MS.gene031760:intron | 10.0% |
| !! | AAAAAATGAAGAAATATAGT+TGG | - | chr4.3:31201184-31201203 | MS.gene031760:intron | 15.0% |
| !! | AAAAAGATGCAAAATAAATA+AGG | - | chr4.3:31201022-31201041 | MS.gene031760:CDS | 15.0% |
| !! | AAAAGATGCAAAATAAATAA+GGG | - | chr4.3:31201023-31201042 | MS.gene031760:CDS | 15.0% |
| !! | AAAATAAACAACATATACTA+TGG | + | chr4.3:31199525-31199544 | None:intergenic | 15.0% |
| !! | AAAGAAATAATTAATGTACT+TGG | - | chr4.3:31201055-31201074 | MS.gene031760:CDS | 15.0% |
| !! | AAGAAAATTTATAAAATAGC+AGG | + | chr4.3:31201270-31201289 | None:intergenic | 15.0% |
| !! | AATTCTCTTTATAATGTTAT+AGG | - | chr4.3:31199181-31199200 | MS.gene031760:intron | 15.0% |
| !! | CAAAACTCTTAAATTAATAA+CGG | - | chr4.3:31202212-31202231 | MS.gene031760:intron | 15.0% |
| !! | CGAATTAAAAAATAACATAT+TGG | - | chr4.3:31199798-31199817 | MS.gene031760:CDS | 15.0% |
| !!! | AAAATATTCGTACTTTTTTT+GGG | - | chr4.3:31201742-31201761 | MS.gene031760:intron | 15.0% |
| !!! | ATGTTCAAATTATTTTTGAA+TGG | - | chr4.3:31201784-31201803 | MS.gene031760:intron | 15.0% |
| !!! | TAAAATATTCGTACTTTTTT+TGG | - | chr4.3:31201741-31201760 | MS.gene031760:intron | 15.0% |
| !!! | TAACTGTCTTTTTTATTTAT+TGG | - | chr4.3:31200097-31200116 | MS.gene031760:intron | 15.0% |
| !!! | TGAATCAATATTTTTAGATA+TGG | - | chr4.3:31200551-31200570 | MS.gene031760:intron | 15.0% |
| !!! | TGTTCAAATTATTTTTGAAT+GGG | - | chr4.3:31201785-31201804 | MS.gene031760:intron | 15.0% |
| !! | ATGAAGATAAAATTAATTCC+TGG | - | chr4.3:31203466-31203485 | MS.gene031760:CDS | 20.0% |
| !! | CATAAAACAATAGAAGTAAA+CGG | - | chr4.3:31203280-31203299 | MS.gene031760:CDS | 20.0% |
| !! | GAAATTTGATTACTTTAATC+TGG | - | chr4.3:31201808-31201827 | MS.gene031760:intron | 20.0% |
| !! | GATTTAACATTTAAAGAGAA+AGG | + | chr4.3:31202442-31202461 | None:intergenic | 20.0% |
| !! | TAAATCAAATTAAAGTCAGA+AGG | + | chr4.3:31200323-31200342 | None:intergenic | 20.0% |
| !! | TCATTGAAAACATGTAAATT+TGG | + | chr4.3:31199641-31199660 | None:intergenic | 20.0% |
| !! | TCTTTACTATACAAATCTTA+TGG | + | chr4.3:31202525-31202544 | None:intergenic | 20.0% |
| !!! | AAATATTCGTACTTTTTTTG+GGG | - | chr4.3:31201743-31201762 | MS.gene031760:intron | 20.0% |
| !!! | AACATAACATAAGTTGATAT+TGG | + | chr4.3:31203375-31203394 | None:intergenic | 20.0% |
| !!! | AGTACGAATATTTTAGAATT+TGG | + | chr4.3:31201736-31201755 | None:intergenic | 20.0% |
| !!! | AGTATATTATTTCTAGGATA+CGG | - | chr4.3:31201150-31201169 | MS.gene031760:CDS | 20.0% |
| !!! | ATTTGATTTATCAGAAACTA+TGG | - | chr4.3:31200333-31200352 | MS.gene031760:intron | 20.0% |
| !!! | GACAATTTTTTTTCTCAAAA+GGG | - | chr4.3:31201105-31201124 | MS.gene031760:CDS | 20.0% |
| !!! | GGATTCTAAATATTGATTTT+TGG | - | chr4.3:31199819-31199838 | MS.gene031760:intron | 20.0% |
| !!! | GTTCAAATTATTTTTGAATG+GGG | - | chr4.3:31201786-31201805 | MS.gene031760:intron | 20.0% |
| !!! | TAAATATATGTTTCTATCTC+AGG | - | chr4.3:31199248-31199267 | MS.gene031760:intron | 20.0% |
| !!! | TATTTTGAAAGCATTTCAAA+AGG | - | chr4.3:31199539-31199558 | MS.gene031760:intron | 20.0% |
| !!! | TCACTTATAAACATTTTTTC+AGG | + | chr4.3:31201455-31201474 | None:intergenic | 20.0% |
| !!! | TGACATTGTTAATTTTACTA+TGG | - | chr4.3:31198709-31198728 | MS.gene031760:intron | 20.0% |
| ! | AAATTCTCTAACATGATTTC+TGG | - | chr4.3:31198733-31198752 | MS.gene031760:intron | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr4.3:31199035-31199054 | None:intergenic | 25.0% |
| ! | AGGACTAATCAGATTATTTA+AGG | - | chr4.3:31199773-31199792 | MS.gene031760:CDS | 25.0% |
| ! | CATCTTATGAAAAATGGAAA+AGG | - | chr4.3:31202145-31202164 | MS.gene031760:intron | 25.0% |
| ! | CGTATAACTTTCAACTATAA+TGG | + | chr4.3:31198827-31198846 | None:intergenic | 25.0% |
| ! | GTTATTTATTCATGGCTAAT+AGG | - | chr4.3:31199995-31200014 | MS.gene031760:intron | 25.0% |
| ! | TAAAGATAGTAATTGCAAAG+AGG | + | chr4.3:31198398-31198417 | None:intergenic | 25.0% |
| ! | TAAATTAACTCTCTCTCTTA+AGG | + | chr4.3:31200969-31200988 | None:intergenic | 25.0% |
| ! | TATTGACAACATATACACAT+AGG | - | chr4.3:31199723-31199742 | MS.gene031760:CDS | 25.0% |
| ! | TCTCTTTATAATGTTATAGG+AGG | - | chr4.3:31199184-31199203 | MS.gene031760:intron | 25.0% |
| ! | TTATAATGTTATAGGAGGTT+TGG | - | chr4.3:31199189-31199208 | MS.gene031760:intron | 25.0% |
| ! | TTATGAAAAATGGAAAAGGT+GGG | - | chr4.3:31202149-31202168 | MS.gene031760:intron | 25.0% |
| ! | TTTCAGTAACTATAGAAAAG+AGG | + | chr4.3:31202102-31202121 | None:intergenic | 25.0% |
| !! | CAAAATAAATAAGGGTATGT+TGG | - | chr4.3:31201031-31201050 | MS.gene031760:CDS | 25.0% |
| !! | CAATTTTGTAGGATTTAGTT+AGG | - | chr4.3:31201498-31201517 | MS.gene031760:intron | 25.0% |
| !! | GAGAAAAAAGCATAAAAAAC+AGG | + | chr4.3:31200256-31200275 | None:intergenic | 25.0% |
| !! | TCAAAAGGGTCTTATAATTA+GGG | - | chr4.3:31201119-31201138 | MS.gene031760:CDS | 25.0% |
| !! | TCTTTTCTAATGGTTTTCTT+AGG | - | chr4.3:31199040-31199059 | MS.gene031760:intron | 25.0% |
| !! | TGCATTTAGTCTAAAATTCA+GGG | + | chr4.3:31199956-31199975 | None:intergenic | 25.0% |
| !! | TTGCATTTAGTCTAAAATTC+AGG | + | chr4.3:31199957-31199976 | None:intergenic | 25.0% |
| !!! | AGTTCGAATCATATCTTTTT+TGG | - | chr4.3:31198545-31198564 | MS.gene031760:intron | 25.0% |
| !!! | GACAAAAATGTTTTAACTTC+TGG | + | chr4.3:31199151-31199170 | None:intergenic | 25.0% |
| !!! | GGACAATTTTTTTTCTCAAA+AGG | - | chr4.3:31201104-31201123 | MS.gene031760:CDS | 25.0% |
| !!! | GGTTTAGTGTTATTTATTCA+TGG | - | chr4.3:31199987-31200006 | MS.gene031760:intron | 25.0% |
| !!! | GTTCGAATCATATCTTTTTT+GGG | - | chr4.3:31198546-31198565 | MS.gene031760:intron | 25.0% |
| !!! | TTAACTAAAAAGGTGTTTCT+TGG | - | chr4.3:31198309-31198328 | MS.gene031760:intron | 25.0% |
| !!! | TTATTTTGTATATAGGTAGC+TGG | - | chr4.3:31203059-31203078 | MS.gene031760:intron | 25.0% |
| !!! | TTCGAATCATATCTTTTTTG+GGG | - | chr4.3:31198547-31198566 | MS.gene031760:intron | 25.0% |
| AATGTACTTGGAAATACCAA+AGG | - | chr4.3:31201067-31201086 | MS.gene031760:CDS | 30.0% | |
| ACTAAATGCAAGAACATGTA+AGG | - | chr4.3:31199966-31199985 | MS.gene031760:intron | 30.0% | |
| ACTATTGCACTTTGTATATG+CGG | - | chr4.3:31201224-31201243 | MS.gene031760:intron | 30.0% | |
| ATGAAGTTTAAATCATGCGA+GGG | + | chr4.3:31199480-31199499 | None:intergenic | 30.0% | |
| ATGATATGTAATAGCCAAAG+TGG | + | chr4.3:31198175-31198194 | None:intergenic | 30.0% | |
| ATGTACTTGGAAATACCAAA+GGG | - | chr4.3:31201068-31201087 | MS.gene031760:CDS | 30.0% | |
| ATTACGGAGATTAAGAAAGT+TGG | - | chr4.3:31200895-31200914 | MS.gene031760:intron | 30.0% | |
| ATTTGGACATTAGCACTATT+TGG | + | chr4.3:31199624-31199643 | None:intergenic | 30.0% | |
| CAAAGATCATCTTAGATTCA+AGG | + | chr4.3:31202564-31202583 | None:intergenic | 30.0% | |
| CTCTCTCATCTTATGAAAAA+TGG | - | chr4.3:31202139-31202158 | MS.gene031760:intron | 30.0% | |
| CTGGATTTAAATTGTAGGAT+AGG | - | chr4.3:31202353-31202372 | MS.gene031760:CDS | 30.0% | |
| CTGTAGGAAAAAATATAACC+AGG | + | chr4.3:31203487-31203506 | None:intergenic | 30.0% | |
| CTTATGAAAAATGGAAAAGG+TGG | - | chr4.3:31202148-31202167 | MS.gene031760:intron | 30.0% | |
| GGAATCTGGATTTAAATTGT+AGG | - | chr4.3:31202348-31202367 | MS.gene031760:CDS | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | - | chr4.3:31198995-31199014 | MS.gene031760:intron | 30.0% | |
| TAGATTCAAGGAATAGTTCT+TGG | + | chr4.3:31202552-31202571 | None:intergenic | 30.0% | |
| TATGAAGTTTAAATCATGCG+AGG | + | chr4.3:31199481-31199500 | None:intergenic | 30.0% | |
| TATGTATATGTGCTTCTTTC+TGG | - | chr4.3:31199414-31199433 | MS.gene031760:intron | 30.0% | |
| TATTTATTGGACATGATACC+TGG | - | chr4.3:31200110-31200129 | MS.gene031760:intron | 30.0% | |
| TATTTGAGAAGGGGAAAAAA+AGG | + | chr4.3:31198684-31198703 | None:intergenic | 30.0% | |
| TCACTTCTAACATGAATGAT+CGG | - | chr4.3:31200442-31200461 | MS.gene031760:intron | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | + | chr4.3:31198988-31199007 | None:intergenic | 30.0% | |
| TGCAATTACTATCTTTAGAC+AGG | - | chr4.3:31198401-31198420 | MS.gene031760:intron | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | + | chr4.3:31198991-31199010 | None:intergenic | 30.0% | |
| TGTTCCTTTGCACTTAATAA+GGG | - | chr4.3:31200356-31200375 | MS.gene031760:intron | 30.0% | |
| TTTCTATGCAGTGAAATGTT+TGG | - | chr4.3:31202381-31202400 | MS.gene031760:CDS | 30.0% | |
| TTTGTGGCAGTTAACTAAAA+AGG | - | chr4.3:31198299-31198318 | MS.gene031760:intron | 30.0% | |
| ! | ACTATAGAAAAGAGGCATAT+TGG | + | chr4.3:31202094-31202113 | None:intergenic | 30.0% |
| ! | AGAATGAGGCTTATTACTTT+TGG | - | chr4.3:31202327-31202346 | MS.gene031760:CDS | 30.0% |
| ! | ATCTCCGTAATTTTTGCAAA+AGG | + | chr4.3:31200886-31200905 | None:intergenic | 30.0% |
| ! | ATTCTCTTTTCCTATCTTCA+AGG | + | chr4.3:31200029-31200048 | None:intergenic | 30.0% |
| ! | CTCAAAAGGGTCTTATAATT+AGG | - | chr4.3:31201118-31201137 | MS.gene031760:CDS | 30.0% |
| ! | CTTTGTTTCTTGAAGTTACA+AGG | + | chr4.3:31202616-31202635 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr4.3:31199030-31199049 | MS.gene031760:intron | 30.0% |
| ! | GGAGGTAGTATATTATTTCT+AGG | - | chr4.3:31201144-31201163 | MS.gene031760:CDS | 30.0% |
| ! | TCTTAGTTTAATTGCCACTT+TGG | - | chr4.3:31198158-31198177 | MS.gene031760:CDS | 30.0% |
| ! | TTCTCTTTTCCTATCTTCAA+GGG | + | chr4.3:31200028-31200047 | None:intergenic | 30.0% |
| !! | AAAATTGACTTGTAAGGGAA+GGG | + | chr4.3:31201485-31201504 | None:intergenic | 30.0% |
| !! | CCTACAAAATTGACTTGTAA+GGG | + | chr4.3:31201490-31201509 | None:intergenic | 30.0% |
| !! | TCCTACAAAATTGACTTGTA+AGG | + | chr4.3:31201491-31201510 | None:intergenic | 30.0% |
| !! | TGTCAACATTTGTTTTCTGT+AGG | + | chr4.3:31203503-31203522 | None:intergenic | 30.0% |
| !!! | ACTTCTCTTTTTGAGATGTA+AGG | - | chr4.3:31200215-31200234 | MS.gene031760:intron | 30.0% |
| !!! | AGAGCTCACATTTTTTTTGT+AGG | + | chr4.3:31201302-31201321 | None:intergenic | 30.0% |
| !!! | CTTCTCTTTTTGAGATGTAA+GGG | - | chr4.3:31200216-31200235 | MS.gene031760:intron | 30.0% |
| !!! | GAGCTCACATTTTTTTTGTA+GGG | + | chr4.3:31201301-31201320 | None:intergenic | 30.0% |
| !!! | GTTGTTGTTGTTTTAACTTC+TGG | + | chr4.3:31198915-31198934 | None:intergenic | 30.0% |
| !!! | GTTTTACTTGGAACTTGTTA+GGG | - | chr4.3:31199375-31199394 | MS.gene031760:intron | 30.0% |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr4.3:31199095-31199114 | None:intergenic | 35.0% | |
| AAGCGTCAAAAAGTAGAGTT+AGG | + | chr4.3:31202475-31202494 | None:intergenic | 35.0% | |
| AAGTGATCTTACGATAACGT+AGG | + | chr4.3:31200428-31200447 | None:intergenic | 35.0% | |
| AAGTTACACTTACATGTTGC+AGG | - | chr4.3:31199855-31199874 | MS.gene031760:intron | 35.0% | |
| AGAAAATGGAACAACTGCTA+CGG | - | chr4.3:31200729-31200748 | MS.gene031760:intron | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr4.3:31199023-31199042 | None:intergenic | 35.0% | |
| AGGTACAATTGCATTCTTTG+TGG | - | chr4.3:31202993-31203012 | MS.gene031760:intron | 35.0% | |
| ATTGCTTACCATGCAAAAGT+TGG | + | chr4.3:31202063-31202082 | None:intergenic | 35.0% | |
| CAATGACTCATTGAAAGACT+TGG | - | chr4.3:31199655-31199674 | MS.gene031760:intron | 35.0% | |
| GAAAAGAGAATCAGTTCTGT+TGG | - | chr4.3:31200038-31200057 | MS.gene031760:intron | 35.0% | |
| GACATTGATCATGTGCAAAT+TGG | + | chr4.3:31203424-31203443 | None:intergenic | 35.0% | |
| GATTAAGTATTCCAGCCTTA+CGG | - | chr4.3:31200285-31200304 | MS.gene031760:intron | 35.0% | |
| GCAAAAGGCTCCTATATTTA+GGG | + | chr4.3:31200871-31200890 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | + | chr4.3:31199098-31199117 | None:intergenic | 35.0% | |
| GTGTTCCTTTGCACTTAATA+AGG | - | chr4.3:31200355-31200374 | MS.gene031760:intron | 35.0% | |
| GTTGCTAAATAAACCATTGC+CGG | + | chr4.3:31198225-31198244 | None:intergenic | 35.0% | |
| TAAGATGATCTTTGTTCACG+AGG | - | chr4.3:31202570-31202589 | MS.gene031760:intron | 35.0% | |
| TATCATGCATTTAACAGCAG+AGG | - | chr4.3:31198189-31198208 | MS.gene031760:CDS | 35.0% | |
| TCATACAACGTAAGCATACT+GGG | + | chr4.3:31199702-31199721 | None:intergenic | 35.0% | |
| TCCAAGTAAAACGTGAAAAC+TGG | + | chr4.3:31199367-31199386 | None:intergenic | 35.0% | |
| TCTAATAATGCTGAGCTTGA+TGG | - | chr4.3:31202797-31202816 | MS.gene031760:intron | 35.0% | |
| TGACCATTTACAACTGTTTC+CGG | + | chr4.3:31202649-31202668 | None:intergenic | 35.0% | |
| TGAGATGTAAGGGAATTGTT+TGG | - | chr4.3:31200226-31200245 | MS.gene031760:intron | 35.0% | |
| TGCAAAAGGCTCCTATATTT+AGG | + | chr4.3:31200872-31200891 | None:intergenic | 35.0% | |
| TGTACTTGGAAATACCAAAG+GGG | - | chr4.3:31201069-31201088 | MS.gene031760:CDS | 35.0% | |
| TGTTAATCAAGGCTTTGCAT+TGG | - | chr4.3:31198463-31198482 | MS.gene031760:intron | 35.0% | |
| TTCATACAACGTAAGCATAC+TGG | + | chr4.3:31199703-31199722 | None:intergenic | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | - | chr4.3:31199099-31199118 | MS.gene031760:intron | 35.0% | |
| TTGGTTTACAAGATGATCGA+TGG | + | chr4.3:31203405-31203424 | None:intergenic | 35.0% | |
| ! | AAGGGTCTTATAATTAGGGA+CGG | - | chr4.3:31201123-31201142 | MS.gene031760:CDS | 35.0% |
| ! | ACAAAGTGCAATAGTTTGTC+AGG | + | chr4.3:31201219-31201238 | None:intergenic | 35.0% |
| ! | ACCAAAGGGGTCTTATAATA+AGG | - | chr4.3:31201082-31201101 | MS.gene031760:CDS | 35.0% |
| ! | ACCAGTTTTCACGTTTTACT+TGG | - | chr4.3:31199363-31199382 | MS.gene031760:intron | 35.0% |
| ! | ACTTTTTGACGCTTTGTCAT+GGG | - | chr4.3:31202481-31202500 | MS.gene031760:intron | 35.0% |
| ! | ATGTCACTGACTATTTGAGA+AGG | + | chr4.3:31198695-31198714 | None:intergenic | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr4.3:31199011-31199030 | None:intergenic | 35.0% |
| ! | CAGTTGTTCCATTTTCTGAT+GGG | + | chr4.3:31200726-31200745 | None:intergenic | 35.0% |
| ! | CCAAAGGGGTCTTATAATAA+GGG | - | chr4.3:31201083-31201102 | MS.gene031760:CDS | 35.0% |
| ! | CCCTTACAAGTCAATTTTGT+AGG | - | chr4.3:31201487-31201506 | MS.gene031760:intron | 35.0% |
| ! | GGAGCCTTTTGCAAAAATTA+CGG | - | chr4.3:31200879-31200898 | MS.gene031760:intron | 35.0% |
| ! | GTCACTTGTTGAAAAACAGT+GGG | + | chr4.3:31203307-31203326 | None:intergenic | 35.0% |
| ! | TAACATGATTTCTGGAAGGA+TGG | - | chr4.3:31198741-31198760 | MS.gene031760:intron | 35.0% |
| ! | TAGTCATCATGTGTGTTTTG+TGG | - | chr4.3:31198283-31198302 | MS.gene031760:intron | 35.0% |
| ! | TCACTTGTTGAAAAACAGTG+GGG | + | chr4.3:31203306-31203325 | None:intergenic | 35.0% |
| ! | TCTCTAACATGATTTCTGGA+AGG | - | chr4.3:31198737-31198756 | MS.gene031760:intron | 35.0% |
| ! | TGATCAATGTCTTCTGAGAA+TGG | - | chr4.3:31203433-31203452 | MS.gene031760:CDS | 35.0% |
| ! | TGGCTTGTGATAATTTGAGT+CGG | - | chr4.3:31201968-31201987 | MS.gene031760:intron | 35.0% |
| ! | TGTCACTGACTATTTGAGAA+GGG | + | chr4.3:31198694-31198713 | None:intergenic | 35.0% |
| ! | TGTCACTTGTTGAAAAACAG+TGG | + | chr4.3:31203308-31203327 | None:intergenic | 35.0% |
| ! | TTAATCTGGAATATCACCCA+GGG | - | chr4.3:31201822-31201841 | MS.gene031760:intron | 35.0% |
| ! | TTTAATCTGGAATATCACCC+AGG | - | chr4.3:31201821-31201840 | MS.gene031760:intron | 35.0% |
| !! | CAAAATTGACTTGTAAGGGA+AGG | + | chr4.3:31201486-31201505 | None:intergenic | 35.0% |
| !! | CGTTTTACTTGGAACTTGTT+AGG | - | chr4.3:31199374-31199393 | MS.gene031760:intron | 35.0% |
| !! | GAAAAAGTATTCATAAGCCG+TGG | - | chr4.3:31201662-31201681 | MS.gene031760:intron | 35.0% |
| !! | TACTTTTTGACGCTTTGTCA+TGG | - | chr4.3:31202480-31202499 | MS.gene031760:intron | 35.0% |
| !! | TAGCCTAATGATTCTAGGAT+AGG | + | chr4.3:31201554-31201573 | None:intergenic | 35.0% |
| !!! | GGCTTATTACTTTTGGAATC+TGG | - | chr4.3:31202334-31202353 | MS.gene031760:CDS | 35.0% |
| AAAATGGAACAACTGCTACG+GGG | - | chr4.3:31200731-31200750 | MS.gene031760:intron | 40.0% | |
| AAACCATTGCCGGATAAAAC+TGG | + | chr4.3:31198215-31198234 | None:intergenic | 40.0% | |
| AACTTGAGACAACACAGACA+CGG | + | chr4.3:31198529-31198548 | None:intergenic | 40.0% | |
| AAGGCTCCTATATTTAGGGA+CGG | + | chr4.3:31200867-31200886 | None:intergenic | 40.0% | |
| AATGCAATTGTACCTCGTTC+TGG | + | chr4.3:31202988-31203007 | None:intergenic | 40.0% | |
| ACATGTTGCAGGTAAGTTCA+TGG | - | chr4.3:31199866-31199885 | MS.gene031760:intron | 40.0% | |
| ACCATGCAAAAGTTGGAGAA+GGG | + | chr4.3:31202056-31202075 | None:intergenic | 40.0% | |
| ACCATTTACAACTGTTTCCG+GGG | + | chr4.3:31202647-31202666 | None:intergenic | 40.0% | |
| ACTAACCTCGAAAGAGAACA+GGG | - | chr4.3:31201902-31201921 | MS.gene031760:intron | 40.0% | |
| ACTCACGAATTAAGCTCTTC+AGG | + | chr4.3:31200483-31200502 | None:intergenic | 40.0% | |
| ACTGCAAAGAAGCTTCTATG+CGG | - | chr4.3:31200622-31200641 | MS.gene031760:intron | 40.0% | |
| AGCAACTTCCAAGATCAGTT+TGG | - | chr4.3:31198239-31198258 | MS.gene031760:intron | 40.0% | |
| AGCTCCCTTATTAAGTGCAA+AGG | + | chr4.3:31200363-31200382 | None:intergenic | 40.0% | |
| AGGGAATAATACTCAGACAC+AGG | + | chr4.3:31199461-31199480 | None:intergenic | 40.0% | |
| AGGTAAAGACAAAAGCCGTA+AGG | + | chr4.3:31200303-31200322 | None:intergenic | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | chr4.3:31199070-31199089 | None:intergenic | 40.0% | |
| ATGACTTGATGCAGATGAAG+AGG | + | chr4.3:31203580-31203599 | None:intergenic | 40.0% | |
| CCCTTATTATAAGACCCCTT+TGG | + | chr4.3:31201086-31201105 | None:intergenic | 40.0% | |
| CTATGTCAGTGACATGCTTA+TGG | - | chr4.3:31199321-31199340 | MS.gene031760:intron | 40.0% | |
| CTCACGAATTAAGCTCTTCA+GGG | + | chr4.3:31200482-31200501 | None:intergenic | 40.0% | |
| CTCTATTACATTCCTTGCCA+TGG | - | chr4.3:31198428-31198447 | MS.gene031760:intron | 40.0% | |
| GAAAATGGAACAACTGCTAC+GGG | - | chr4.3:31200730-31200749 | MS.gene031760:intron | 40.0% | |
| GAAACAAAGTTTAATCCCCC+CGG | - | chr4.3:31202627-31202646 | MS.gene031760:intron | 40.0% | |
| GACCATTTACAACTGTTTCC+GGG | + | chr4.3:31202648-31202667 | None:intergenic | 40.0% | |
| GAGCCTATCCTAGAATCATT+AGG | - | chr4.3:31201548-31201567 | MS.gene031760:intron | 40.0% | |
| GCTGGAATGACATTTGGTTA+TGG | - | chr4.3:31203077-31203096 | MS.gene031760:intron | 40.0% | |
| GGAATGATACCCTTGAAGAT+AGG | - | chr4.3:31200016-31200035 | MS.gene031760:intron | 40.0% | |
| GGGCTACTAGCAAAAAATTC+AGG | + | chr4.3:31199682-31199701 | None:intergenic | 40.0% | |
| GGTTGCATTTAAAAAGCCAG+TGG | - | chr4.3:31199887-31199906 | MS.gene031760:intron | 40.0% | |
| TAAAATAGCAGGCCACTGTT+TGG | + | chr4.3:31201259-31201278 | None:intergenic | 40.0% | |
| TACATTCCTTGCCATGGTTA+CGG | - | chr4.3:31198434-31198453 | MS.gene031760:intron | 40.0% | |
| TACCATGCAAAAGTTGGAGA+AGG | + | chr4.3:31202057-31202076 | None:intergenic | 40.0% | |
| TACGGCACTCTTGTTAATCA+AGG | - | chr4.3:31198452-31198471 | MS.gene031760:intron | 40.0% | |
| TACTAACCTCGAAAGAGAAC+AGG | - | chr4.3:31201901-31201920 | MS.gene031760:intron | 40.0% | |
| TAGGTAGCTGGAATGACATT+TGG | - | chr4.3:31203071-31203090 | MS.gene031760:intron | 40.0% | |
| TCAAACAAAACTCCAGAACG+AGG | - | chr4.3:31202973-31202992 | MS.gene031760:intron | 40.0% | |
| TCACGAATTAAGCTCTTCAG+GGG | + | chr4.3:31200481-31200500 | None:intergenic | 40.0% | |
| TGAACCACTGATCTTTGAAC+CGG | + | chr4.3:31202773-31202792 | None:intergenic | 40.0% | |
| ! | AATCAAGGCTTTGCATTGGT+TGG | - | chr4.3:31198467-31198486 | MS.gene031760:intron | 40.0% |
| ! | GAGCGATTCTATCTAGAATG+AGG | - | chr4.3:31202313-31202332 | MS.gene031760:CDS | 40.0% |
| ! | GATTAGTCCTGCTGTACTAA+GGG | + | chr4.3:31199763-31199782 | None:intergenic | 40.0% |
| ! | GCAGTTGTTCCATTTTCTGA+TGG | + | chr4.3:31200727-31200746 | None:intergenic | 40.0% |
| ! | GTCACTGACTATTTGAGAAG+GGG | + | chr4.3:31198693-31198712 | None:intergenic | 40.0% |
| ! | GTCTGATTTGATGCTTTCTG+TGG | - | chr4.3:31198886-31198905 | MS.gene031760:CDS | 40.0% |
| ! | TAACGGGAACTTTTTGCAAG+TGG | + | chr4.3:31201333-31201352 | None:intergenic | 40.0% |
| ! | TGATTAGTCCTGCTGTACTA+AGG | + | chr4.3:31199764-31199783 | None:intergenic | 40.0% |
| !! | AAGAAGCACCAAACTGATCT+TGG | + | chr4.3:31198250-31198269 | None:intergenic | 40.0% |
| !! | TTTGGTGCTTCTTCTCAACA+TGG | - | chr4.3:31198257-31198276 | MS.gene031760:intron | 40.0% |
| AAAGACAAAAGCCGTAAGGC+TGG | + | chr4.3:31200299-31200318 | None:intergenic | 45.0% | |
| AAATGGAACAACTGCTACGG+GGG | - | chr4.3:31200732-31200751 | MS.gene031760:intron | 45.0% | |
| AACCACTGATCTTTGAACCG+GGG | + | chr4.3:31202771-31202790 | None:intergenic | 45.0% | |
| ACACTCAAGATGTCCAGTCT+TGG | - | chr4.3:31201592-31201611 | MS.gene031760:intron | 45.0% | |
| ACATCTCTAACCTTACGAGC+TGG | - | chr4.3:31201685-31201704 | MS.gene031760:intron | 45.0% | |
| ACGGGTAGCCTAATGATTCT+AGG | + | chr4.3:31201559-31201578 | None:intergenic | 45.0% | |
| ACGTCAGTATCAGATAGCAG+AGG | - | chr4.3:31203540-31203559 | MS.gene031760:CDS | 45.0% | |
| AGAGGCTTAATGAGCAAGCA+TGG | - | chr4.3:31198355-31198374 | MS.gene031760:intron | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr4.3:31199086-31199105 | None:intergenic | 45.0% | |
| AGCTCACATGACTTATGGAG+AGG | - | chr4.3:31202934-31202953 | MS.gene031760:intron | 45.0% | |
| ATCAAGTGCCACATTGCTCA+GGG | - | chr4.3:31199572-31199591 | MS.gene031760:intron | 45.0% | |
| ATGCATTCATTGGTCCACCA+GGG | + | chr4.3:31202865-31202884 | None:intergenic | 45.0% | |
| ATGTCCAGTCTTGGTTGTGA+TGG | - | chr4.3:31201601-31201620 | MS.gene031760:intron | 45.0% | |
| ATGTTCATTGCCTCCGATCA+TGG | - | chr4.3:31200656-31200675 | MS.gene031760:intron | 45.0% | |
| CAAAAGCAGTTTGTGATCCC+TGG | - | chr4.3:31202845-31202864 | MS.gene031760:intron | 45.0% | |
| CATGCAGCTCACATGACTTA+TGG | - | chr4.3:31202929-31202948 | MS.gene031760:intron | 45.0% | |
| CATTTACAACTGTTTCCGGG+GGG | + | chr4.3:31202645-31202664 | None:intergenic | 45.0% | |
| CCATTTACAACTGTTTCCGG+GGG | + | chr4.3:31202646-31202665 | None:intergenic | 45.0% | |
| CGTAAGGTTAGAGATGTCCA+CGG | + | chr4.3:31201682-31201701 | None:intergenic | 45.0% | |
| CTAACCTCGAAAGAGAACAG+GGG | - | chr4.3:31201903-31201922 | MS.gene031760:intron | 45.0% | |
| CTACCTCCGTCCCTAAATAT+AGG | - | chr4.3:31200858-31200877 | MS.gene031760:intron | 45.0% | |
| CTCATTAAGCCTCTCAACCT+CGG | + | chr4.3:31198349-31198368 | None:intergenic | 45.0% | |
| CTGGTTGTCCCATCAGAAAA+TGG | - | chr4.3:31200715-31200734 | MS.gene031760:intron | 45.0% | |
| GAACCACTGATCTTTGAACC+GGG | + | chr4.3:31202772-31202791 | None:intergenic | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr4.3:31199076-31199095 | None:intergenic | 45.0% | |
| GCATTTACTAGCAACCAAGC+AGG | - | chr4.3:31198614-31198633 | MS.gene031760:intron | 45.0% | |
| GCTCACATGACTTATGGAGA+GGG | - | chr4.3:31202935-31202954 | MS.gene031760:intron | 45.0% | |
| GCTTAATGAGCAAGCATGGA+GGG | - | chr4.3:31198359-31198378 | MS.gene031760:intron | 45.0% | |
| GGAACATAGAAGCTTTGCAC+TGG | + | chr4.3:31202896-31202915 | None:intergenic | 45.0% | |
| GGAGAAGAGGATGCATTCAT+TGG | + | chr4.3:31202875-31202894 | None:intergenic | 45.0% | |
| GGGAGCTATACGAGACATTT+AGG | - | chr4.3:31200376-31200395 | MS.gene031760:intron | 45.0% | |
| GTACTTCTGATTACTGCTCG+AGG | - | chr4.3:31202277-31202296 | MS.gene031760:intron | 45.0% | |
| GTCAGTGACATGCTTATGGA+GGG | - | chr4.3:31199325-31199344 | MS.gene031760:intron | 45.0% | |
| TCAGTGACATGCTTATGGAG+GGG | - | chr4.3:31199326-31199345 | MS.gene031760:intron | 45.0% | |
| TGAAGTTCCCTTAGTACAGC+AGG | - | chr4.3:31199753-31199772 | MS.gene031760:CDS | 45.0% | |
| TGTCAGTGACATGCTTATGG+AGG | - | chr4.3:31199324-31199343 | MS.gene031760:intron | 45.0% | |
| TGTCCAGTCTTGGTTGTGAT+GGG | - | chr4.3:31201602-31201621 | MS.gene031760:intron | 45.0% | |
| ! | AAGCCAGTGGCATGCTTTTA+TGG | - | chr4.3:31199900-31199919 | MS.gene031760:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4.3:31198942-31198961 | MS.gene031760:CDS | 45.0% |
| ! | ACCCTTCTCCAACTTTTGCA+TGG | - | chr4.3:31202052-31202071 | MS.gene031760:intron | 45.0% |
| ! | AGCCAGTGGCATGCTTTTAT+GGG | - | chr4.3:31199901-31199920 | MS.gene031760:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4.3:31198941-31198960 | MS.gene031760:CDS | 45.0% |
| ! | GCTGCATGTGTTTGAGATTG+TGG | + | chr4.3:31202917-31202936 | None:intergenic | 45.0% |
| ! | GGTCTTATAATTAGGGACGG+AGG | - | chr4.3:31201126-31201145 | MS.gene031760:CDS | 45.0% |
| ! | TGGAAAAGGTGGGTTCAAAG+TGG | - | chr4.3:31202159-31202178 | MS.gene031760:intron | 45.0% |
| !! | GGGTTCAAAGTGGATTGTAC+TGG | - | chr4.3:31202169-31202188 | MS.gene031760:intron | 45.0% |
| !! | TAACAAGAGTGCCGTAACCA+TGG | + | chr4.3:31198448-31198467 | None:intergenic | 45.0% |
| !! | TAATCAAGCCTTGTTCTCGC+TGG | + | chr4.3:31201848-31201867 | None:intergenic | 45.0% |
| !! | TTTTGTTTGAGCTCCCAGCT+GGG | + | chr4.3:31202963-31202982 | None:intergenic | 45.0% |
| !!! | AACCTTACGAGCTGGTTTTG+TGG | - | chr4.3:31201693-31201712 | MS.gene031760:intron | 45.0% |
| !! | TTATGAATAAAAAAAATTAA+CGG | + | chr4.3:31201350-31201369 | None:intergenic | 5.0% |
| AAGCAGTTTGTGATCCCTGG+TGG | - | chr4.3:31202848-31202867 | MS.gene031760:intron | 50.0% | |
| AAGCGCCATCGAGAAGAAGA+AGG | + | chr4.3:31198575-31198594 | None:intergenic | 50.0% | |
| AATGGAACAACTGCTACGGG+GGG | - | chr4.3:31200733-31200752 | MS.gene031760:intron | 50.0% | |
| ACATGCTTATGGAGGGGCAA+TGG | - | chr4.3:31199332-31199351 | MS.gene031760:intron | 50.0% | |
| ACCACTGATCTTTGAACCGG+GGG | + | chr4.3:31202770-31202789 | None:intergenic | 50.0% | |
| ACTAGCAACCAAGCAGGCTT+CGG | - | chr4.3:31198620-31198639 | MS.gene031760:intron | 50.0% | |
| AGCTCAGCTCAAACTGAGGT+TGG | - | chr4.3:31201937-31201956 | MS.gene031760:intron | 50.0% | |
| AGTGTGAGCCAAGTGACTAC+GGG | + | chr4.3:31201577-31201596 | None:intergenic | 50.0% | |
| ATGCGGTTGCAGACATATGC+GGG | - | chr4.3:31198135-31198154 | MS.gene031760:CDS | 50.0% | |
| CAGTCAGATGCTCATCGACA+AGG | - | chr4.3:31200769-31200788 | MS.gene031760:intron | 50.0% | |
| CATGCTTATGGAGGGGCAAT+GGG | - | chr4.3:31199333-31199352 | MS.gene031760:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr4.3:31198943-31198962 | None:intergenic | 50.0% | |
| CCCCCGGAAACAGTTGTAAA+TGG | - | chr4.3:31202643-31202662 | MS.gene031760:intron | 50.0% | |
| CTCAAACTGAGGTTGGCGAT+GGG | - | chr4.3:31201944-31201963 | MS.gene031760:intron | 50.0% | |
| CTCCACAAAACCAGCTCGTA+AGG | + | chr4.3:31201698-31201717 | None:intergenic | 50.0% | |
| CTCTTCACGACAGATGATGC+AGG | + | chr4.3:31200596-31200615 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr4.3:31198946-31198965 | MS.gene031760:CDS | 50.0% | |
| CTTCTGATTACTGCTCGAGG+AGG | - | chr4.3:31202280-31202299 | MS.gene031760:intron | 50.0% | |
| GAAGCTTTGCACTGGAGAAG+AGG | + | chr4.3:31202888-31202907 | None:intergenic | 50.0% | |
| GAGTGTGAGCCAAGTGACTA+CGG | + | chr4.3:31201578-31201597 | None:intergenic | 50.0% | |
| GATCAAGTGCCACATTGCTC+AGG | - | chr4.3:31199571-31199590 | MS.gene031760:intron | 50.0% | |
| GATGCATTCATTGGTCCACC+AGG | + | chr4.3:31202866-31202885 | None:intergenic | 50.0% | |
| GATGCGGTTGCAGACATATG+CGG | - | chr4.3:31198134-31198153 | MS.gene031760:CDS | 50.0% | |
| GCTCCTATATTTAGGGACGG+AGG | + | chr4.3:31200864-31200883 | None:intergenic | 50.0% | |
| GCTCTTTACCCTGAGCAATG+TGG | + | chr4.3:31199583-31199602 | None:intergenic | 50.0% | |
| GGCTTAATGAGCAAGCATGG+AGG | - | chr4.3:31198358-31198377 | MS.gene031760:intron | 50.0% | |
| GGGTTCCTTCTTCTTCTCGA+TGG | - | chr4.3:31198567-31198586 | MS.gene031760:intron | 50.0% | |
| GTCCAGTCTTGGTTGTGATG+GGG | - | chr4.3:31201603-31201622 | MS.gene031760:intron | 50.0% | |
| TAATGAGCAAGCATGGAGGG+AGG | - | chr4.3:31198362-31198381 | MS.gene031760:intron | 50.0% | |
| TAGCAGGCCACTGTTTGGAA+AGG | + | chr4.3:31201254-31201273 | None:intergenic | 50.0% | |
| TCAAACTGAGGTTGGCGATG+GGG | - | chr4.3:31201945-31201964 | MS.gene031760:intron | 50.0% | |
| TCTCAAACTTACAGCTCCCC+TGG | - | chr4.3:31202731-31202750 | MS.gene031760:intron | 50.0% | |
| TGAGACAACACAGACACGGA+AGG | + | chr4.3:31198525-31198544 | None:intergenic | 50.0% | |
| TGGAAGCTCAGCTCAAACTG+AGG | - | chr4.3:31201933-31201952 | MS.gene031760:intron | 50.0% | |
| TGGCTACACTCTTTATCCCC+CGG | - | chr4.3:31202751-31202770 | MS.gene031760:intron | 50.0% | |
| TGTCGATGAGCATCTGACTG+TGG | + | chr4.3:31200769-31200788 | None:intergenic | 50.0% | |
| TTAGGCTACCCGTAGTCACT+TGG | - | chr4.3:31201566-31201585 | MS.gene031760:intron | 50.0% | |
| ! | CACCCATAAAAGCATGCCAC+TGG | + | chr4.3:31199906-31199925 | None:intergenic | 50.0% |
| ! | CAGTGGCATGCTTTTATGGG+TGG | - | chr4.3:31199904-31199923 | MS.gene031760:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4.3:31198940-31198959 | MS.gene031760:CDS | 50.0% |
| ! | GGGATAAAGAGTGTAGCCAG+GGG | + | chr4.3:31202750-31202769 | None:intergenic | 50.0% |
| ! | GGGGATAAAGAGTGTAGCCA+GGG | + | chr4.3:31202751-31202770 | None:intergenic | 50.0% |
| !! | AGGCCAGTTTTATCCGGCAA+TGG | - | chr4.3:31198209-31198228 | MS.gene031760:CDS | 50.0% |
| !! | CAGCAGAGGCCAGTTTTATC+CGG | - | chr4.3:31198203-31198222 | MS.gene031760:CDS | 50.0% |
| !! | CAGGGTAAAGAGCACTTTGG+AGG | - | chr4.3:31199590-31199609 | MS.gene031760:intron | 50.0% |
| !! | CTGCTTTTGTGCTTGCTCAC+TGG | + | chr4.3:31202834-31202853 | None:intergenic | 50.0% |
| !! | GCTCAGGGTAAAGAGCACTT+TGG | - | chr4.3:31199587-31199606 | MS.gene031760:intron | 50.0% |
| !!! | GTTTTGTTTGAGCTCCCAGC+TGG | + | chr4.3:31202964-31202983 | None:intergenic | 50.0% |
| ACAACCAGTGCTCTGCAGGT+AGG | + | chr4.3:31200703-31200722 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr4.3:31198954-31198973 | MS.gene031760:CDS | 55.0% | |
| AGCTCTTCAGGGGTTGCATC+TGG | + | chr4.3:31200471-31200490 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr4.3:31198955-31198974 | None:intergenic | 55.0% | |
| CAACCAGTGCTCTGCAGGTA+GGG | + | chr4.3:31200702-31200721 | None:intergenic | 55.0% | |
| CACCCCATCACAACCAAGAC+TGG | + | chr4.3:31201608-31201627 | None:intergenic | 55.0% | |
| CCTCGAAAGAGAACAGGGGA+AGG | - | chr4.3:31201907-31201926 | MS.gene031760:intron | 55.0% | |
| CCTTCCCCTGTTCTCTTTCG+AGG | + | chr4.3:31201910-31201929 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr4.3:31198948-31198967 | None:intergenic | 55.0% | |
| CGGTGCACCTTTCCAAACAG+TGG | - | chr4.3:31201244-31201263 | MS.gene031760:intron | 55.0% | |
| CTTCTTACCACGGCGTCTAC+TGG | - | chr4.3:31199109-31199128 | MS.gene031760:intron | 55.0% | |
| GAAGCAGACGTGTCAAAGCC+AGG | + | chr4.3:31200131-31200150 | None:intergenic | 55.0% | |
| GATCGAAACCGAAGCCTGCT+TGG | + | chr4.3:31198631-31198650 | None:intergenic | 55.0% | |
| GCAAGCATGGAGGGAGGTTA+TGG | - | chr4.3:31198368-31198387 | MS.gene031760:intron | 55.0% | |
| GCTCAAACTGAGGTTGGCGA+TGG | - | chr4.3:31201943-31201962 | MS.gene031760:intron | 55.0% | |
| TATGGAGAGGGATCCCAGCT+GGG | - | chr4.3:31202947-31202966 | MS.gene031760:intron | 55.0% | |
| TCCCCCGGTTCAAAGATCAG+TGG | - | chr4.3:31202766-31202785 | MS.gene031760:intron | 55.0% | |
| TGGTTCTCTTCGAGAAGCCG+AGG | - | chr4.3:31198329-31198348 | MS.gene031760:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr4.3:31198954-31198973 | None:intergenic | 55.0% | |
| TTATGGAGAGGGATCCCAGC+TGG | - | chr4.3:31202946-31202965 | MS.gene031760:intron | 55.0% | |
| TTCGAGAAGCCGAGGTTGAG+AGG | - | chr4.3:31198337-31198356 | MS.gene031760:intron | 55.0% | |
| ! | AAGAGAACAGGGGAAGGCAC+TGG | - | chr4.3:31201913-31201932 | MS.gene031760:intron | 55.0% |
| ! | GGGGGATAAAGAGTGTAGCC+AGG | + | chr4.3:31202752-31202771 | None:intergenic | 55.0% |
| !! | AGAGTGCCGTAACCATGGCA+AGG | + | chr4.3:31198443-31198462 | None:intergenic | 55.0% |
| AACTGAGGTTGGCGATGGGG+TGG | - | chr4.3:31201948-31201967 | MS.gene031760:intron | 60.0% | |
| GAGAAGACCAGTAGACGCCG+TGG | + | chr4.3:31199119-31199138 | None:intergenic | 60.0% | |
| GCCTCCGATCATGGCTAGAG+CGG | - | chr4.3:31200665-31200684 | MS.gene031760:intron | 60.0% | |
| GCTGCCGCTCTAGCCATGAT+CGG | + | chr4.3:31200672-31200691 | None:intergenic | 60.0% | |
| TGGGACAACCAGTGCTCTGC+AGG | + | chr4.3:31200707-31200726 | None:intergenic | 60.0% | |
| TTGCCCTACCTGCAGAGCAC+TGG | - | chr4.3:31200696-31200715 | MS.gene031760:intron | 60.0% | |
| ACCCAGGGCCAGCGAGAACA+AGG | - | chr4.3:31201837-31201856 | MS.gene031760:intron | 65.0% | |
| GCCGCTCTAGCCATGATCGG+AGG | + | chr4.3:31200669-31200688 | None:intergenic | 65.0% | |
| ! | GCCTTGTTCTCGCTGGCCCT+GGG | + | chr4.3:31201841-31201860 | None:intergenic | 65.0% |
| !! | AGCCTTGTTCTCGCTGGCCC+TGG | + | chr4.3:31201842-31201861 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 31198132 | 31203626 | 31198132 | ID=MS.gene031760 |
| chr4.3 | mRNA | 31198132 | 31203626 | 31198132 | ID=MS.gene031760.t1;Parent=MS.gene031760 |
| chr4.3 | exon | 31203094 | 31203626 | 31203094 | ID=MS.gene031760.t1.exon1;Parent=MS.gene031760.t1 |
| chr4.3 | CDS | 31203094 | 31203626 | 31203094 | ID=cds.MS.gene031760.t1;Parent=MS.gene031760.t1 |
| chr4.3 | exon | 31202312 | 31202488 | 31202312 | ID=MS.gene031760.t1.exon2;Parent=MS.gene031760.t1 |
| chr4.3 | CDS | 31202312 | 31202488 | 31202312 | ID=cds.MS.gene031760.t1;Parent=MS.gene031760.t1 |
| chr4.3 | exon | 31201262 | 31201411 | 31201262 | ID=MS.gene031760.t1.exon3;Parent=MS.gene031760.t1 |
| chr4.3 | CDS | 31201262 | 31201411 | 31201262 | ID=cds.MS.gene031760.t1;Parent=MS.gene031760.t1 |
| chr4.3 | exon | 31200968 | 31201176 | 31200968 | ID=MS.gene031760.t1.exon4;Parent=MS.gene031760.t1 |
| chr4.3 | CDS | 31200968 | 31201176 | 31200968 | ID=cds.MS.gene031760.t1;Parent=MS.gene031760.t1 |
| chr4.3 | exon | 31199685 | 31199835 | 31199685 | ID=MS.gene031760.t1.exon5;Parent=MS.gene031760.t1 |
| chr4.3 | CDS | 31199685 | 31199835 | 31199685 | ID=cds.MS.gene031760.t1;Parent=MS.gene031760.t1 |
| chr4.3 | exon | 31198764 | 31199013 | 31198764 | ID=MS.gene031760.t1.exon6;Parent=MS.gene031760.t1 |
| chr4.3 | CDS | 31198764 | 31199013 | 31198764 | ID=cds.MS.gene031760.t1;Parent=MS.gene031760.t1 |
| chr4.3 | exon | 31198132 | 31198251 | 31198132 | ID=MS.gene031760.t1.exon7;Parent=MS.gene031760.t1 |
| chr4.3 | CDS | 31198132 | 31198251 | 31198132 | ID=cds.MS.gene031760.t1;Parent=MS.gene031760.t1 |
| Gene Sequence |
| Protein sequence |
