AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032345

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032345.t1 MTR_0034s0060 99.401 668 4 0 1 668 131 798 0.0 1386
MS.gene032345.t1 MTR_2g073240 89.671 668 68 1 1 667 13 680 0.0 1268
MS.gene032345.t1 MTR_1g009600 73.835 665 161 3 4 667 2 654 0.0 1036
MS.gene032345.t1 MTR_4g102550 83.509 285 47 0 383 667 11 295 4.79e-178 508
MS.gene032345.t1 MTR_3g452330 51.381 181 36 1 85 265 1 129 2.62e-48 170
MS.gene032345.t1 MTR_3g452330 60.000 100 40 0 375 474 138 237 8.25e-34 130
MS.gene032345.t1 MTR_8g089180 26.000 350 218 13 8 327 72 410 5.04e-25 108
MS.gene032345.t1 MTR_8g089180 26.000 350 218 13 8 327 72 410 5.04e-25 108
MS.gene032345.t1 MTR_4g063600 27.974 311 201 10 9 312 34 328 5.28e-25 107
MS.gene032345.t1 MTR_2g096660 29.618 314 192 10 9 312 40 334 5.34e-25 107
MS.gene032345.t1 MTR_4g120030 26.979 341 216 12 1 332 105 421 8.01e-25 108
MS.gene032345.t1 MTR_4g063600 27.653 311 199 11 9 312 34 325 2.07e-24 105
MS.gene032345.t1 MTR_2g032100 25.788 349 220 12 8 327 72 410 5.21e-24 105
MS.gene032345.t1 MTR_1g088480 27.653 311 196 12 9 312 120 408 3.43e-23 103
MS.gene032345.t1 MTR_4g129820 28.190 337 207 10 8 319 96 422 1.60e-22 101
MS.gene032345.t1 MTR_4g024600 27.545 334 213 8 8 319 102 428 1.80e-21 98.2
MS.gene032345.t1 MTR_5g009170 27.066 351 215 14 7 327 47 386 3.73e-20 93.6
MS.gene032345.t1 MTR_0354s0040 27.405 343 217 9 2 319 74 409 1.45e-19 92.0
MS.gene032345.t1 MTR_8g099535 27.557 352 214 13 7 328 4 344 2.30e-19 90.5
MS.gene032345.t1 MTR_4g102270 26.724 348 208 10 3 319 89 420 6.64e-19 90.1
MS.gene032345.t1 MTR_5g011940 26.136 352 225 10 3 326 86 430 9.10e-19 89.7
MS.gene032345.t1 MTR_3g084090 26.866 335 216 10 9 321 101 428 1.91e-18 89.0
MS.gene032345.t1 MTR_2g032100 28.272 191 124 5 8 193 72 254 1.57e-16 81.3
MS.gene032345.t1 MTR_4g134490 23.429 350 229 13 7 327 25 364 2.14e-16 82.0
MS.gene032345.t1 MTR_4g134490 23.315 356 228 14 7 327 25 370 1.06e-14 76.6
MS.gene032345.t1 MTR_3g105440 30.242 248 142 10 1 234 1 231 2.07e-14 77.0
MS.gene032345.t1 MTR_3g105440 29.388 245 148 9 1 234 1 231 2.07e-14 77.0
MS.gene032345.t1 MTR_7g108490 27.083 192 124 6 141 322 131 316 9.26e-12 67.0
MS.gene032345.t1 MTR_7g108490 27.083 192 124 6 141 322 132 317 9.52e-12 67.0
MS.gene032345.t1 MTR_5g009160 27.473 273 163 12 81 327 17 280 3.11e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032345.t1 AT1G78570 88.209 670 74 2 1 667 1 668 0.0 1243
MS.gene032345.t1 AT3G14790 85.757 667 91 2 1 667 4 666 0.0 1169
MS.gene032345.t1 AT3G14790 85.757 667 91 2 1 667 1 663 0.0 1168
MS.gene032345.t1 AT1G53500 84.535 666 100 2 2 667 4 666 0.0 1160
MS.gene032345.t1 AT1G63000 81.690 284 52 0 384 667 13 296 6.81e-178 508
MS.gene032345.t1 AT4G20460 27.401 354 208 13 8 327 71 409 3.81e-28 117
MS.gene032345.t1 AT2G28760 29.073 313 195 10 9 312 33 327 2.98e-26 110
MS.gene032345.t1 AT2G28760 29.073 313 195 10 9 312 33 327 2.98e-26 110
MS.gene032345.t1 AT2G28760 29.073 313 195 10 9 312 33 327 2.98e-26 110
MS.gene032345.t1 AT2G28760 29.073 313 195 10 9 312 64 358 6.02e-26 110
MS.gene032345.t1 AT5G59290 28.754 313 196 10 9 312 3 297 8.88e-26 108
MS.gene032345.t1 AT5G59290 28.754 313 196 10 9 312 32 326 1.16e-25 109
MS.gene032345.t1 AT5G59290 28.754 313 196 10 9 312 25 319 1.35e-25 108
MS.gene032345.t1 AT3G62830 27.796 313 198 10 9 312 121 414 1.39e-25 110
MS.gene032345.t1 AT3G62830 27.796 313 198 10 9 312 121 414 1.39e-25 110
MS.gene032345.t1 AT5G59290 28.754 313 196 10 9 312 47 341 1.56e-25 108
MS.gene032345.t1 AT3G46440 28.435 313 197 10 9 312 31 325 3.87e-25 107
MS.gene032345.t1 AT3G46440 28.435 313 197 10 9 312 31 325 3.87e-25 107
MS.gene032345.t1 AT3G53520 27.302 315 205 10 9 316 122 419 6.41e-25 108
MS.gene032345.t1 AT2G47650 27.157 313 200 10 9 312 123 416 3.26e-24 106
MS.gene032345.t1 AT5G44480 26.934 349 214 14 8 326 72 409 8.41e-24 105
MS.gene032345.t1 AT5G44480 26.934 349 214 14 8 326 72 409 8.41e-24 105
MS.gene032345.t1 AT5G44480 26.934 349 214 14 8 326 72 409 8.41e-24 105
MS.gene032345.t1 AT5G44480 26.934 349 214 14 8 326 96 433 1.01e-23 105
MS.gene032345.t1 AT1G30620 27.714 350 212 14 8 327 71 409 2.34e-23 103
MS.gene032345.t1 AT1G30620 27.714 350 212 14 8 327 72 410 2.72e-23 103
MS.gene032345.t1 AT1G30620 27.714 350 212 14 8 327 72 410 2.72e-23 103
MS.gene032345.t1 AT1G30620 27.714 350 212 14 8 327 72 410 2.72e-23 103
MS.gene032345.t1 AT1G30620 27.714 350 212 14 8 327 72 410 2.72e-23 103
MS.gene032345.t1 AT2G47650 26.814 317 202 10 9 312 123 422 4.06e-23 103
MS.gene032345.t1 AT3G53520 26.984 315 204 11 9 316 122 417 1.38e-22 101
MS.gene032345.t1 AT3G53520 26.331 338 202 11 9 316 122 442 1.54e-22 101
MS.gene032345.t1 AT2G45310 27.628 333 212 9 9 319 99 424 2.24e-21 97.8
MS.gene032345.t1 AT1G63180 26.611 357 221 13 1 327 1 346 8.88e-21 94.7
MS.gene032345.t1 AT4G00110 27.246 334 214 8 8 319 92 418 1.88e-20 95.1
MS.gene032345.t1 AT1G02000 26.647 334 216 9 8 319 93 419 1.09e-19 92.8
MS.gene032345.t1 AT1G30620 30.366 191 120 5 8 193 72 254 1.36e-18 87.4
MS.gene032345.t1 AT4G30440 30.043 233 153 5 8 234 89 317 3.37e-18 88.2
MS.gene032345.t1 AT3G53520 27.897 233 148 7 8 234 121 339 1.79e-17 85.1
MS.gene032345.t1 AT3G23820 26.048 334 218 9 8 319 113 439 2.53e-16 82.4
MS.gene032345.t1 AT1G64440 27.066 351 213 15 8 327 4 342 4.71e-16 80.5
MS.gene032345.t1 AT4G12250 26.048 334 218 8 8 319 97 423 3.49e-15 79.0
MS.gene032345.t1 AT1G63180 27.365 296 169 12 1 262 1 284 3.62e-15 77.4
MS.gene032345.t1 AT4G23920 25.291 344 222 12 7 323 3 338 1.57e-14 75.9
MS.gene032345.t1 AT1G47290 29.918 244 140 11 5 234 8 234 2.96e-13 72.4
MS.gene032345.t1 AT1G47290 29.918 244 140 11 5 234 8 234 8.36e-13 71.6
MS.gene032345.t1 AT2G26260 26.104 249 149 8 2 234 5 234 1.00e-12 71.6
MS.gene032345.t1 AT1G73250 26.923 182 121 5 151 322 140 319 5.41e-12 68.2

Find 173 sgRNAs with CRISPR-Local

Find 205 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGAATTCTTTCTTTAATT+TGG 0.120604 8.2:+48531738 None:intergenic
ACACGTGGAAACAATGTTTA+TGG 0.186415 8.2:-48533199 MS.gene032345:CDS
TCTTTGATGGAAAGCAATTC+TGG 0.218557 8.2:+48531718 None:intergenic
ATAGAAAGATCCCATGAAAT+TGG 0.250976 8.2:+48532226 None:intergenic
AAACCAATGCCGGAGCCTTC+TGG 0.251282 8.2:+48532266 None:intergenic
CTGCGGAGTGGCAGTGTTCT+TGG 0.257055 8.2:+48532631 None:intergenic
TCTGTTTATTTCTTCTTGTT+TGG 0.260972 8.2:+48531670 None:intergenic
TTAGAAGCCTGCAAGGTTAC+TGG 0.269609 8.2:-48533406 MS.gene032345:CDS
CTTGATAAGTGATTCTTTGA+TGG 0.279707 8.2:+48531705 None:intergenic
GAAATTCTGCCACTTGAAAC+TGG 0.290497 8.2:+48531822 None:intergenic
TTTGCCATCTCGATTGAAAT+AGG 0.290998 8.2:+48531934 None:intergenic
AGGGTGGATTGGAGGTTTGC+TGG 0.296271 8.2:-48532573 MS.gene032345:CDS
GATTCCAAAGTTCATCCTTT+TGG 0.313837 8.2:-48533152 MS.gene032345:CDS
TTTCCACGTGTTGTGATAAC+AGG 0.321129 8.2:+48533211 None:intergenic
ACTTACCATAGCTTTAGTTT+TGG 0.328658 8.2:+48532202 None:intergenic
AATTTCTCGGGAAACTGATT+TGG 0.331767 8.2:+48533175 None:intergenic
ACAAATTTAATGTTAGCTTC+TGG 0.336048 8.2:+48532932 None:intergenic
CCGAAGAATATCCTCATTAC+TGG 0.336591 8.2:-48533733 MS.gene032345:CDS
GTTGGCCATGTTTACAATAT+CGG 0.337863 8.2:-48533019 MS.gene032345:CDS
CGACCCTTTGCGTATTCATA+TGG 0.339196 8.2:+48532524 None:intergenic
ATGAGATCCTTGAGATGTAT+AGG 0.343554 8.2:-48531858 MS.gene032345:CDS
TCCAATACTGTCATGCTGTT+TGG 0.344679 8.2:+48531967 None:intergenic
TTCTTGCTGTTTGGTAGGAC+AGG 0.352546 8.2:-48532593 MS.gene032345:CDS
GATCTGGCCAGTAACCTTGC+AGG 0.353065 8.2:+48533399 None:intergenic
GTCAGTACTGATGAGGTCTA+TGG 0.353770 8.2:-48533361 MS.gene032345:CDS
CCAATCAACATTGGGTCTTC+CGG 0.367734 8.2:+48532424 None:intergenic
CCTTTGAAGTTCTTGCTGTT+TGG 0.369703 8.2:-48532602 MS.gene032345:CDS
TGTCAACTACTTGCTTATTA+CGG 0.386916 8.2:-48533536 MS.gene032345:CDS
ATCCTCATTACTGGGGCAGC+TGG 0.388115 8.2:-48533724 MS.gene032345:CDS
GGTAGGACAGGGTGGATTGG+AGG 0.391913 8.2:-48532581 MS.gene032345:CDS
AGAGAAACTTGAGTGGAATC+TGG 0.393435 8.2:-48531912 MS.gene032345:CDS
GTGGCAGTGTTCTTGGTTGA+TGG 0.400754 8.2:+48532638 None:intergenic
GGAAAGACTCTTCCGATTCA+TGG 0.405661 8.2:-48533121 MS.gene032345:CDS
CTTTGATGGAAAGCAATTCT+GGG 0.407319 8.2:+48531719 None:intergenic
GGAAGACAAGCCCAATTTCA+TGG 0.408529 8.2:-48532237 MS.gene032345:CDS
CCCCTTGACAAACTTAAAGT+TGG 0.415072 8.2:+48533579 None:intergenic
ACCATCCGCGCTAATGTTGC+TGG 0.416077 8.2:-48532380 MS.gene032345:CDS
AGTTCCGTATATGTTGTTCT+TGG 0.417317 8.2:+48533438 None:intergenic
ATGACAATGTATGCACCCTT+AGG 0.418171 8.2:-48532074 MS.gene032345:CDS
GAACTTTGGAATCAATTTCT+CGG 0.423207 8.2:+48533162 None:intergenic
AGGCTCCGGCATTGGTTTCA+AGG 0.423913 8.2:-48532261 MS.gene032345:CDS
TGTTGCAGAGTACGGGTTTG+TGG 0.424954 8.2:+48533285 None:intergenic
AACTTTGGAATCAATTTCTC+GGG 0.425445 8.2:+48533163 None:intergenic
TTCACCAAGAACAACATATA+CGG 0.425841 8.2:-48533442 MS.gene032345:CDS
ACTCATGTCGACAACTCATT+TGG 0.427673 8.2:-48533478 MS.gene032345:CDS
TTTGGTAGGACAGGGTGGAT+TGG 0.439952 8.2:-48532584 MS.gene032345:CDS
TTGGCCATGTTTACAATATC+GGG 0.445880 8.2:-48533018 MS.gene032345:CDS
TGAGATCCTTGAGATGTATA+GGG 0.450832 8.2:-48531857 MS.gene032345:CDS
TAGAAAGATCCCATGAAATT+GGG 0.452975 8.2:+48532227 None:intergenic
CCCTTGACAAACTTAAAGTT+GGG 0.453571 8.2:+48533580 None:intergenic
TTGCATCTCATGTTGCCAAC+CGG 0.455327 8.2:-48533696 MS.gene032345:CDS
CACGTGGAAACAATGTTTAT+GGG 0.456078 8.2:-48533198 MS.gene032345:CDS
ACCGATGAAGATGCTATTGT+TGG 0.459550 8.2:-48533334 MS.gene032345:CDS
CGAAGAATATCCTCATTACT+GGG 0.460488 8.2:-48533732 MS.gene032345:CDS
GAAATGCTTGTCATGGCATA+TGG 0.461925 8.2:-48533250 MS.gene032345:CDS
CATCCAGAAGGCTCCGGCAT+TGG 0.462462 8.2:-48532269 MS.gene032345:CDS
AAGTATCTCTGGTCATTAAA+CGG 0.464062 8.2:+48532899 None:intergenic
TCATTGTGGCTCACAGCACC+AGG 0.470389 8.2:+48531877 None:intergenic
GAAAGACTCTTCCGATTCAT+GGG 0.472425 8.2:-48533120 MS.gene032345:CDS
CCGGAAGACCCAATGTTGAT+TGG 0.478270 8.2:-48532424 MS.gene032345:CDS
ATGGCATATGGTAGGTCATA+CGG 0.483908 8.2:-48533238 MS.gene032345:CDS
GGGTGGATTGGAGGTTTGCT+GGG 0.485086 8.2:-48532572 MS.gene032345:CDS
TGGCAGTGTTCTTGGTTGAT+GGG 0.488497 8.2:+48532639 None:intergenic
CATGAATGAACCTTCTGATC+TGG 0.488900 8.2:+48533383 None:intergenic
GTTGCAGAGTACGGGTTTGT+GGG 0.489248 8.2:+48533286 None:intergenic
TTGCTCAGATCAGATGAAAT+CGG 0.490308 8.2:+48532042 None:intergenic
TGTTGCTGGCACTTTAACAT+TGG 0.496616 8.2:-48532366 MS.gene032345:CDS
GATCATCGAGAAAGTATCTC+TGG 0.496831 8.2:+48532888 None:intergenic
TTAGATGAATTGACTGATGC+GGG 0.498621 8.2:+48532677 None:intergenic
TTGATGATAAATTATGCTAC+TGG 0.499263 8.2:-48532317 MS.gene032345:CDS
TGAAGTTCTTGCTGTTTGGT+AGG 0.503504 8.2:-48532598 MS.gene032345:CDS
AAATTCTGCCACTTGAAACT+GGG 0.504329 8.2:+48531823 None:intergenic
TGGGAGATGATTTCGAAGGA+AGG 0.504770 8.2:+48533599 None:intergenic
GCCAGCAACATTAGCGCGGA+TGG 0.505695 8.2:+48532379 None:intergenic
GAAAAGCCTGCATATATCCT+TGG 0.507143 8.2:+48532964 None:intergenic
TCTTTCCTTGCATAGCCAAA+AGG 0.507278 8.2:+48533137 None:intergenic
GTTGATGATGCCTGGTGGAA+TGG 0.508097 8.2:-48532732 MS.gene032345:CDS
TCAGTACTGATGAGGTCTAT+GGG 0.508268 8.2:-48533360 MS.gene032345:CDS
TGACAATGTATGCACCCTTA+GGG 0.510852 8.2:-48532073 MS.gene032345:CDS
CCCAACTTTAAGTTTGTCAA+GGG 0.511512 8.2:-48533580 MS.gene032345:CDS
TCCAAACAGCATGACAGTAT+TGG 0.513133 8.2:-48531968 MS.gene032345:CDS
GTTTCGCACCAATCAACATT+GGG 0.513420 8.2:+48532416 None:intergenic
CTATTCCAAAACTAAAGCTA+TGG 0.514463 8.2:-48532207 MS.gene032345:intron
ATAGCCAAAAGGATGAACTT+TGG 0.521511 8.2:+48533148 None:intergenic
GTTCTTCACAAGGGAGAGGT+TGG 0.523496 8.2:-48533037 MS.gene032345:CDS
GAGAGGACCACATGGGATGA+AGG 0.523892 8.2:-48532839 MS.gene032345:CDS
TTTAATGCTGCAGGTGTCAC+CGG 0.525836 8.2:-48532443 MS.gene032345:CDS
CCAGTAATGAGGATATTCTT+CGG 0.534894 8.2:+48533733 None:intergenic
TGCTGTTTGGTAGGACAGGG+TGG 0.535213 8.2:-48532589 MS.gene032345:CDS
TGGCATATGGTAGGTCATAC+GGG 0.535706 8.2:-48533237 MS.gene032345:CDS
TTAGAACCATCCCCATGAAT+CGG 0.536407 8.2:+48533109 None:intergenic
CCGAGGATGTTGATGATGCC+TGG 0.537047 8.2:-48532740 MS.gene032345:CDS
TCCCAACTTTAAGTTTGTCA+AGG 0.538100 8.2:-48533581 MS.gene032345:CDS
ATCATCAACATCCTCGGATG+AGG 0.538319 8.2:+48532746 None:intergenic
CCAAACAGCAAGAACTTCAA+AGG 0.539699 8.2:+48532602 None:intergenic
CCGTACTCTGCAACAAAAGC+AGG 0.539993 8.2:-48533277 MS.gene032345:CDS
GCAGCACATCCAGAAGGCTC+CGG 0.540124 8.2:-48532275 MS.gene032345:CDS
TTCCTCCTTGAAACCAATGC+CGG 0.540843 8.2:+48532256 None:intergenic
ATCCAGCTGCCCCAGTAATG+AGG 0.547690 8.2:+48533722 None:intergenic
TCTTGCTGTTTGGTAGGACA+GGG 0.548224 8.2:-48532592 MS.gene032345:CDS
AGTTTCGCACCAATCAACAT+TGG 0.552063 8.2:+48532415 None:intergenic
TGTAATCCCTATACATCTCA+AGG 0.552164 8.2:+48531851 None:intergenic
CAATTCATCTAATACTCGTA+TGG 0.556213 8.2:-48532666 MS.gene032345:CDS
GACTGAAGAAAACCATAGAA+TGG 0.557484 8.2:-48532817 MS.gene032345:CDS
CGGGATGGCTTCGGACAAGC+CGG 0.558368 8.2:+48533677 None:intergenic
TTGTCCCGATATTGTAAACA+TGG 0.558984 8.2:+48533014 None:intergenic
AAATCGGCATACGAACCCTA+AGG 0.561199 8.2:+48532058 None:intergenic
GAAGACAAGCCCAATTTCAT+GGG 0.561539 8.2:-48532236 MS.gene032345:CDS
AGGTTACTGGCCAGATCAGA+AGG 0.563011 8.2:-48533393 MS.gene032345:CDS
TATCGGGACAAAGAAGGAAA+GGG 0.566922 8.2:-48533002 MS.gene032345:CDS
TTACAATATCGGGACAAAGA+AGG 0.567443 8.2:-48533008 MS.gene032345:CDS
TCTACCTATTTCAATCGAGA+TGG 0.567753 8.2:-48531938 MS.gene032345:CDS
ATCTGGAACTTCACTAACCC+TGG 0.570382 8.2:-48531895 MS.gene032345:CDS
AGTTGTTCTTCACAAGGGAG+AGG 0.570906 8.2:-48533041 MS.gene032345:CDS
CTTCAGTCCTTCATCCCATG+TGG 0.572232 8.2:+48532832 None:intergenic
CTCTGCAACAAAAGCAGGAG+CGG 0.574561 8.2:-48533272 MS.gene032345:CDS
CACTCTTGAAGAGCAAGCCA+AGG 0.577008 8.2:-48531800 MS.gene032345:CDS
TCGAGCAGCGACAATCACCT+TGG 0.579593 8.2:+48531783 None:intergenic
ATATCGGGACAAAGAAGGAA+AGG 0.579866 8.2:-48533003 MS.gene032345:CDS
ATGTAGCCAAGGATATATGC+AGG 0.580206 8.2:-48532970 MS.gene032345:CDS
TCCAACAATAGCATCTTCAT+CGG 0.581847 8.2:+48533333 None:intergenic
ATTCCATATGAATACGCAAA+GGG 0.581999 8.2:-48532527 MS.gene032345:CDS
ACTCTTCCGATTCATGGGGA+TGG 0.582904 8.2:-48533115 MS.gene032345:CDS
CCAGGCATCATCAACATCCT+CGG 0.585840 8.2:+48532740 None:intergenic
GAAGAAGTTGAGAAGCCTCA+TGG 0.594333 8.2:+48533308 None:intergenic
CAAAGGATGTTTCTGCGGAG+TGG 0.596102 8.2:+48532619 None:intergenic
AACTTCAAAGGATGTTTCTG+CGG 0.601532 8.2:+48532614 None:intergenic
ATTAGATGAATTGACTGATG+CGG 0.603499 8.2:+48532676 None:intergenic
AAAACCTTGGTTGGGCTGAG+AGG 0.605508 8.2:-48532856 MS.gene032345:CDS
CAACTTTAAGTTTGTCAAGG+GGG 0.608121 8.2:-48533578 MS.gene032345:CDS
TGCTTGTCATGGCATATGGT+AGG 0.608244 8.2:-48533246 MS.gene032345:CDS
TGCTCGAAGCAACAATGAGA+TGG 0.612444 8.2:-48531767 MS.gene032345:CDS
TGTCTTATTAGAAGCCTGCA+AGG 0.613132 8.2:-48533413 MS.gene032345:CDS
GCTGATGTGTGCAGAGAGCA+CGG 0.615024 8.2:-48532344 MS.gene032345:CDS
ATTTGAAGTTGTTCTTCACA+AGG 0.615527 8.2:-48533047 MS.gene032345:CDS
AAATGTCTCTCCATTCCACC+AGG 0.615800 8.2:+48532722 None:intergenic
AGGAGCGGAAATGCTTGTCA+TGG 0.617019 8.2:-48533257 MS.gene032345:CDS
GTTGGGCTGAGAGGACCACA+TGG 0.617696 8.2:-48532847 MS.gene032345:CDS
GGGAGTTATCGATGTAGCCA+AGG 0.619015 8.2:-48532981 MS.gene032345:CDS
GGTGGATTGGAGGTTTGCTG+GGG 0.620082 8.2:-48532571 MS.gene032345:CDS
TACGATGCAGCACATCCAGA+AGG 0.620237 8.2:-48532281 MS.gene032345:CDS
GGGAAATTGTGTGAAAAGCA+AGG 0.621950 8.2:-48532551 MS.gene032345:CDS
GTGCATTGCTTCCTCATCCG+AGG 0.623034 8.2:-48532757 MS.gene032345:CDS
ACATTGACCCCAGTTTCAAG+TGG 0.625778 8.2:-48531831 MS.gene032345:CDS
ATGGCTTCGGACAAGCCGGT+TGG 0.627965 8.2:+48533681 None:intergenic
TTCATCTAATACTCGTATGG+TGG 0.628057 8.2:-48532663 MS.gene032345:CDS
CATTCATGTCAGTACTGATG+AGG 0.629890 8.2:-48533368 MS.gene032345:CDS
ATGGCAAAGAGAAACTTGAG+TGG 0.635436 8.2:-48531919 MS.gene032345:CDS
ATCTTTGTGATGAAGTTGCG+TGG 0.638823 8.2:+48532018 None:intergenic
AATCGGCATACGAACCCTAA+GGG 0.640550 8.2:+48532059 None:intergenic
CCAACTTTAAGTTTGTCAAG+GGG 0.643202 8.2:-48533579 MS.gene032345:CDS
TTTGAAGTTGTTCTTCACAA+GGG 0.643778 8.2:-48533046 MS.gene032345:CDS
TGGTCCTCTCAGCCCAACCA+AGG 0.644418 8.2:+48532852 None:intergenic
ATGGGGATGGTTCTAATGTG+AGG 0.645313 8.2:-48533102 MS.gene032345:CDS
CGAAGCAACAATGAGATGGA+TGG 0.645825 8.2:-48531763 MS.gene032345:CDS
TTACCTGTTATCACAACACG+TGG 0.649186 8.2:-48533214 MS.gene032345:CDS
CTGATGTGTGCAGAGAGCAC+GGG 0.653789 8.2:-48532343 MS.gene032345:CDS
ATCGGGACAAAGAAGGAAAG+GGG 0.655672 8.2:-48533001 MS.gene032345:CDS
TCTTTGTGATGAAGTTGCGT+GGG 0.656677 8.2:+48532019 None:intergenic
AATTCTGCCACTTGAAACTG+GGG 0.659291 8.2:+48531824 None:intergenic
AATTCCATATGAATACGCAA+AGG 0.662567 8.2:-48532528 MS.gene032345:CDS
TGCTATTGTTGGAAACCATG+AGG 0.663909 8.2:-48533323 MS.gene032345:CDS
ACATCTCAAGGATCTCATTG+TGG 0.665387 8.2:+48531863 None:intergenic
CAGTACTGATGAGGTCTATG+GGG 0.678940 8.2:-48533359 MS.gene032345:CDS
AAAGACTCTTCCGATTCATG+GGG 0.688876 8.2:-48533119 MS.gene032345:CDS
AAGTTGGGAGATGATTTCGA+AGG 0.693891 8.2:+48533595 None:intergenic
CTCCGGCATTGGTTTCAAGG+AGG 0.696239 8.2:-48532258 MS.gene032345:CDS
AAGTGCCAGCAACATTAGCG+CGG 0.700659 8.2:+48532375 None:intergenic
GTATTGCGAAGATGTTGCTG+AGG 0.701661 8.2:-48533071 MS.gene032345:CDS
CATTGTGGCTCACAGCACCA+GGG 0.711227 8.2:+48531878 None:intergenic
AGGATGTTGATGATGCCTGG+TGG 0.713184 8.2:-48532737 MS.gene032345:CDS
TTGGGCTGAGAGGACCACAT+GGG 0.713326 8.2:-48532846 MS.gene032345:CDS
GAAGAATATCCTCATTACTG+GGG 0.732970 8.2:-48533731 MS.gene032345:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAGATCGTTCTATTTA+AGG + chr8.2:48533249-48533268 None:intergenic 20.0%
!! GAAAAAAATTCATAATGCAA+AGG + chr8.2:48533276-48533295 None:intergenic 20.0%
!!! CTTTTAATTGAATTTTGATC+AGG - chr8.2:48533305-48533324 MS.gene032345:CDS 20.0%
! TGGGAATTCTTTCTTTAATT+TGG + chr8.2:48533688-48533707 None:intergenic 25.0%
!! ACAAATTTAATGTTAGCTTC+TGG + chr8.2:48532494-48532513 None:intergenic 25.0%
!! TTGATGATAAATTATGCTAC+TGG - chr8.2:48533106-48533125 MS.gene032345:CDS 25.0%
!!! ATTTTTGGTATACCATTCTA+TGG + chr8.2:48532621-48532640 None:intergenic 25.0%
AAGTATCTCTGGTCATTAAA+CGG + chr8.2:48532527-48532546 None:intergenic 30.0%
AATTCCATATGAATACGCAA+AGG - chr8.2:48532895-48532914 MS.gene032345:CDS 30.0%
ATAGAAAGATCCCATGAAAT+TGG + chr8.2:48533200-48533219 None:intergenic 30.0%
ATTAGATGAATTGACTGATG+CGG + chr8.2:48532750-48532769 None:intergenic 30.0%
ATTCCATATGAATACGCAAA+GGG - chr8.2:48532896-48532915 MS.gene032345:CDS 30.0%
CAATTCATCTAATACTCGTA+TGG - chr8.2:48532757-48532776 MS.gene032345:CDS 30.0%
CTATTCCAAAACTAAAGCTA+TGG - chr8.2:48533216-48533235 MS.gene032345:CDS 30.0%
CTTGATAAGTGATTCTTTGA+TGG + chr8.2:48533721-48533740 None:intergenic 30.0%
TAGAAAGATCCCATGAAATT+GGG + chr8.2:48533199-48533218 None:intergenic 30.0%
TGTCAACTACTTGCTTATTA+CGG - chr8.2:48531887-48531906 MS.gene032345:CDS 30.0%
TTCACCAAGAACAACATATA+CGG - chr8.2:48531981-48532000 MS.gene032345:CDS 30.0%
! AAGCACAACAATTTTGTACT+CGG + chr8.2:48531769-48531788 None:intergenic 30.0%
! ATTTGAAGTTGTTCTTCACA+AGG - chr8.2:48532376-48532395 MS.gene032345:CDS 30.0%
! TTTGAAGTTGTTCTTCACAA+GGG - chr8.2:48532377-48532396 MS.gene032345:CDS 30.0%
!! AACTTTGGAATCAATTTCTC+GGG + chr8.2:48532263-48532282 None:intergenic 30.0%
!! ATTGAATTTTGATCAGGTTG+AGG - chr8.2:48533311-48533330 MS.gene032345:CDS 30.0%
!! GAACTTTGGAATCAATTTCT+CGG + chr8.2:48532264-48532283 None:intergenic 30.0%
!!! ACTTACCATAGCTTTAGTTT+TGG + chr8.2:48533224-48533243 None:intergenic 30.0%
AATTTCTCGGGAAACTGATT+TGG + chr8.2:48532251-48532270 None:intergenic 35.0%
ACACGTGGAAACAATGTTTA+TGG - chr8.2:48532224-48532243 MS.gene032345:CDS 35.0%
ACCTGCAGCATTAAAAACAT+GGG + chr8.2:48532975-48532994 None:intergenic 35.0%
AGTTCCGTATATGTTGTTCT+TGG + chr8.2:48531988-48532007 None:intergenic 35.0%
ATACCAAAAATCCTGATTGG+TGG - chr8.2:48532630-48532649 MS.gene032345:CDS 35.0%
ATAGCCAAAAGGATGAACTT+TGG + chr8.2:48532278-48532297 None:intergenic 35.0%
ATGAGATCCTTGAGATGTAT+AGG - chr8.2:48533565-48533584 MS.gene032345:CDS 35.0%
CACGTGGAAACAATGTTTAT+GGG - chr8.2:48532225-48532244 MS.gene032345:CDS 35.0%
CCAGTAATGAGGATATTCTT+CGG + chr8.2:48531693-48531712 None:intergenic 35.0%
CCCTTGACAAACTTAAAGTT+GGG + chr8.2:48531846-48531865 None:intergenic 35.0%
CGAAGAATATCCTCATTACT+GGG - chr8.2:48531691-48531710 MS.gene032345:CDS 35.0%
CTTTGATGGAAAGCAATTCT+GGG + chr8.2:48533707-48533726 None:intergenic 35.0%
GAAGAATATCCTCATTACTG+GGG - chr8.2:48531692-48531711 MS.gene032345:CDS 35.0%
GACTGAAGAAAACCATAGAA+TGG - chr8.2:48532606-48532625 MS.gene032345:CDS 35.0%
GGTATACCAAAAATCCTGAT+TGG - chr8.2:48532627-48532646 MS.gene032345:CDS 35.0%
GTTGGCCATGTTTACAATAT+CGG - chr8.2:48532404-48532423 MS.gene032345:CDS 35.0%
TACCAAAAATCCTGATTGGT+GGG - chr8.2:48532631-48532650 MS.gene032345:CDS 35.0%
TCCAACAATAGCATCTTCAT+CGG + chr8.2:48532093-48532112 None:intergenic 35.0%
TCTACCTATTTCAATCGAGA+TGG - chr8.2:48533485-48533504 MS.gene032345:CDS 35.0%
TCTTTGATGGAAAGCAATTC+TGG + chr8.2:48533708-48533727 None:intergenic 35.0%
TGAGATCCTTGAGATGTATA+GGG - chr8.2:48533566-48533585 MS.gene032345:CDS 35.0%
TGTAATCCCTATACATCTCA+AGG + chr8.2:48533575-48533594 None:intergenic 35.0%
TTACAATATCGGGACAAAGA+AGG - chr8.2:48532415-48532434 MS.gene032345:CDS 35.0%
TTAGATGAATTGACTGATGC+GGG + chr8.2:48532749-48532768 None:intergenic 35.0%
TTCATCTAATACTCGTATGG+TGG - chr8.2:48532760-48532779 MS.gene032345:CDS 35.0%
TTGCTCAGATCAGATGAAAT+CGG + chr8.2:48533384-48533403 None:intergenic 35.0%
TTGGCCATGTTTACAATATC+GGG - chr8.2:48532405-48532424 MS.gene032345:CDS 35.0%
TTGTCCCGATATTGTAAACA+TGG + chr8.2:48532412-48532431 None:intergenic 35.0%
TTTGCCATCTCGATTGAAAT+AGG + chr8.2:48533492-48533511 None:intergenic 35.0%
! AAATTCTGCCACTTGAAACT+GGG + chr8.2:48533603-48533622 None:intergenic 35.0%
! AACTTCAAAGGATGTTTCTG+CGG + chr8.2:48532812-48532831 None:intergenic 35.0%
! AGCACAACAATTTTGTACTC+GGG + chr8.2:48531768-48531787 None:intergenic 35.0%
! CAACTTTAAGTTTGTCAAGG+GGG - chr8.2:48531845-48531864 MS.gene032345:CDS 35.0%
! CCAACTTTAAGTTTGTCAAG+GGG - chr8.2:48531844-48531863 MS.gene032345:CDS 35.0%
! CCCAACTTTAAGTTTGTCAA+GGG - chr8.2:48531843-48531862 MS.gene032345:CDS 35.0%
! GATTCCAAAGTTCATCCTTT+TGG - chr8.2:48532271-48532290 MS.gene032345:CDS 35.0%
! TCCCAACTTTAAGTTTGTCA+AGG - chr8.2:48531842-48531861 MS.gene032345:CDS 35.0%
AAAGACTCTTCCGATTCATG+GGG - chr8.2:48532304-48532323 MS.gene032345:CDS 40.0%
AAGTTGGGAGATGATTTCGA+AGG + chr8.2:48531831-48531850 None:intergenic 40.0%
AAGTTTGTCAAGGGGGATAT+CGG - chr8.2:48531852-48531871 MS.gene032345:CDS 40.0%
ACATCTCAAGGATCTCATTG+TGG + chr8.2:48533563-48533582 None:intergenic 40.0%
ACCAAAAATCCTGATTGGTG+GGG - chr8.2:48532632-48532651 MS.gene032345:CDS 40.0%
ACCGATGAAGATGCTATTGT+TGG - chr8.2:48532089-48532108 MS.gene032345:CDS 40.0%
ACTCATGTCGACAACTCATT+TGG - chr8.2:48531945-48531964 MS.gene032345:CDS 40.0%
AGAAGCTGAAAAACCTTGGT+TGG - chr8.2:48532558-48532577 MS.gene032345:CDS 40.0%
AGAGAAACTTGAGTGGAATC+TGG - chr8.2:48533511-48533530 MS.gene032345:CDS 40.0%
AGTTTCGCACCAATCAACAT+TGG + chr8.2:48533011-48533030 None:intergenic 40.0%
ATATCGGGACAAAGAAGGAA+AGG - chr8.2:48532420-48532439 MS.gene032345:CDS 40.0%
ATCTTTGTGATGAAGTTGCG+TGG + chr8.2:48533408-48533427 None:intergenic 40.0%
ATGACAATGTATGCACCCTT+AGG - chr8.2:48533349-48533368 MS.gene032345:CDS 40.0%
ATGGCAAAGAGAAACTTGAG+TGG - chr8.2:48533504-48533523 MS.gene032345:CDS 40.0%
ATGGCATATGGTAGGTCATA+CGG - chr8.2:48532185-48532204 MS.gene032345:intron 40.0%
ATGTAGCCAAGGATATATGC+AGG - chr8.2:48532453-48532472 MS.gene032345:CDS 40.0%
CACCTGCAGCATTAAAAACA+TGG + chr8.2:48532976-48532995 None:intergenic 40.0%
CATGAATGAACCTTCTGATC+TGG + chr8.2:48532043-48532062 None:intergenic 40.0%
CCAAACAGCAAGAACTTCAA+AGG + chr8.2:48532824-48532843 None:intergenic 40.0%
CCCCTTGACAAACTTAAAGT+TGG + chr8.2:48531847-48531866 None:intergenic 40.0%
CCGAAGAATATCCTCATTAC+TGG - chr8.2:48531690-48531709 MS.gene032345:CDS 40.0%
GAAAAGCCTGCATATATCCT+TGG + chr8.2:48532462-48532481 None:intergenic 40.0%
GAAAGACTCTTCCGATTCAT+GGG - chr8.2:48532303-48532322 MS.gene032345:CDS 40.0%
GAAATGCTTGTCATGGCATA+TGG - chr8.2:48532173-48532192 MS.gene032345:intron 40.0%
GAAGACAAGCCCAATTTCAT+GGG - chr8.2:48533187-48533206 MS.gene032345:CDS 40.0%
GAAGCTGAAAAACCTTGGTT+GGG - chr8.2:48532559-48532578 MS.gene032345:CDS 40.0%
GATCAGAAGCTGAAAAACCT+TGG - chr8.2:48532554-48532573 MS.gene032345:CDS 40.0%
GCAGCATTAAAAACATGGGT+TGG + chr8.2:48532971-48532990 None:intergenic 40.0%
GGGAAATTGTGTGAAAAGCA+AGG - chr8.2:48532872-48532891 MS.gene032345:CDS 40.0%
GTTTCGCACCAATCAACATT+GGG + chr8.2:48533010-48533029 None:intergenic 40.0%
TATCGGGACAAAGAAGGAAA+GGG - chr8.2:48532421-48532440 MS.gene032345:CDS 40.0%
TCCAAACAGCATGACAGTAT+TGG - chr8.2:48533455-48533474 MS.gene032345:CDS 40.0%
TCCAATACTGTCATGCTGTT+TGG + chr8.2:48533459-48533478 None:intergenic 40.0%
TCTTTCCTTGCATAGCCAAA+AGG + chr8.2:48532289-48532308 None:intergenic 40.0%
TCTTTGTGATGAAGTTGCGT+GGG + chr8.2:48533407-48533426 None:intergenic 40.0%
TGACAATGTATGCACCCTTA+GGG - chr8.2:48533350-48533369 MS.gene032345:CDS 40.0%
TGCTATTGTTGGAAACCATG+AGG - chr8.2:48532100-48532119 MS.gene032345:intron 40.0%
TGTTGCTGGCACTTTAACAT+TGG - chr8.2:48533057-48533076 MS.gene032345:CDS 40.0%
TTACCTGTTATCACAACACG+TGG - chr8.2:48532209-48532228 MS.gene032345:CDS 40.0%
TTAGAACCATCCCCATGAAT+CGG + chr8.2:48532317-48532336 None:intergenic 40.0%
TTTCCACGTGTTGTGATAAC+AGG + chr8.2:48532215-48532234 None:intergenic 40.0%
! AATTCTGCCACTTGAAACTG+GGG + chr8.2:48533602-48533621 None:intergenic 40.0%
! CAACAATTTTGTACTCGGGA+TGG + chr8.2:48531764-48531783 None:intergenic 40.0%
! GAAATTCTGCCACTTGAAAC+TGG + chr8.2:48533604-48533623 None:intergenic 40.0%
! GGAATGGAGAGACATTTTGA+AGG - chr8.2:48532707-48532726 MS.gene032345:CDS 40.0%
! TATATGCAGGCTTTTCTCGA+TGG - chr8.2:48532466-48532485 MS.gene032345:CDS 40.0%
! TGTCTTATTAGAAGCCTGCA+AGG - chr8.2:48532010-48532029 MS.gene032345:CDS 40.0%
!! ACCCATGTTTTTAATGCTGC+AGG - chr8.2:48532971-48532990 MS.gene032345:CDS 40.0%
!! AGACATTTTGAAGGATCCGA+AGG - chr8.2:48532716-48532735 MS.gene032345:CDS 40.0%
!! CATTCATGTCAGTACTGATG+AGG - chr8.2:48532055-48532074 MS.gene032345:CDS 40.0%
!! CCTTTGAAGTTCTTGCTGTT+TGG - chr8.2:48532821-48532840 MS.gene032345:CDS 40.0%
!! GATCATCGAGAAAGTATCTC+TGG + chr8.2:48532538-48532557 None:intergenic 40.0%
!! TCAGTACTGATGAGGTCTAT+GGG - chr8.2:48532063-48532082 MS.gene032345:CDS 40.0%
!! TGAAGTTCTTGCTGTTTGGT+AGG - chr8.2:48532825-48532844 MS.gene032345:CDS 40.0%
!! TTCATCCTTTTGGCTATGCA+AGG - chr8.2:48532281-48532300 MS.gene032345:CDS 40.0%
AAATCGGCATACGAACCCTA+AGG + chr8.2:48533368-48533387 None:intergenic 45.0%
AAATGTCTCTCCATTCCACC+AGG + chr8.2:48532704-48532723 None:intergenic 45.0%
AATCGGCATACGAACCCTAA+GGG + chr8.2:48533367-48533386 None:intergenic 45.0%
ACATTGACCCCAGTTTCAAG+TGG - chr8.2:48533592-48533611 MS.gene032345:CDS 45.0%
AGTTGTTCTTCACAAGGGAG+AGG - chr8.2:48532382-48532401 MS.gene032345:CDS 45.0%
ATCATCAACATCCTCGGATG+AGG + chr8.2:48532680-48532699 None:intergenic 45.0%
ATCGGGACAAAGAAGGAAAG+GGG - chr8.2:48532422-48532441 MS.gene032345:CDS 45.0%
CAAAAATCCTGATTGGTGGG+GGG - chr8.2:48532634-48532653 MS.gene032345:CDS 45.0%
CCAAAAATCCTGATTGGTGG+GGG - chr8.2:48532633-48532652 MS.gene032345:CDS 45.0%
CCAATCAACATTGGGTCTTC+CGG + chr8.2:48533002-48533021 None:intergenic 45.0%
CGAAGCAACAATGAGATGGA+TGG - chr8.2:48533660-48533679 MS.gene032345:CDS 45.0%
CGACCCTTTGCGTATTCATA+TGG + chr8.2:48532902-48532921 None:intergenic 45.0%
GAAGAAGTTGAGAAGCCTCA+TGG + chr8.2:48532118-48532137 None:intergenic 45.0%
GGAAAGACTCTTCCGATTCA+TGG - chr8.2:48532302-48532321 MS.gene032345:CDS 45.0%
GGAAGACAAGCCCAATTTCA+TGG - chr8.2:48533186-48533205 MS.gene032345:CDS 45.0%
GTATTGCGAAGATGTTGCTG+AGG - chr8.2:48532352-48532371 MS.gene032345:CDS 45.0%
TGCTCGAAGCAACAATGAGA+TGG - chr8.2:48533656-48533675 MS.gene032345:CDS 45.0%
TGCTTGTCATGGCATATGGT+AGG - chr8.2:48532177-48532196 MS.gene032345:intron 45.0%
TGGCAGTGTTCTTGGTTGAT+GGG + chr8.2:48532787-48532806 None:intergenic 45.0%
TGGCATATGGTAGGTCATAC+GGG - chr8.2:48532186-48532205 MS.gene032345:intron 45.0%
TGGGAGATGATTTCGAAGGA+AGG + chr8.2:48531827-48531846 None:intergenic 45.0%
TTAGAAGCCTGCAAGGTTAC+TGG - chr8.2:48532017-48532036 MS.gene032345:CDS 45.0%
TTCCTCCTTGAAACCAATGC+CGG + chr8.2:48533170-48533189 None:intergenic 45.0%
TTGCATCTCATGTTGCCAAC+CGG - chr8.2:48531727-48531746 MS.gene032345:CDS 45.0%
! ATCTGGAACTTCACTAACCC+TGG - chr8.2:48533528-48533547 MS.gene032345:CDS 45.0%
! TTTAATGCTGCAGGTGTCAC+CGG - chr8.2:48532980-48532999 MS.gene032345:CDS 45.0%
! TTTTGTACTCGGGATGGCTT+CGG + chr8.2:48531758-48531777 None:intergenic 45.0%
!! ATGGGGATGGTTCTAATGTG+AGG - chr8.2:48532321-48532340 MS.gene032345:CDS 45.0%
!! CAGTACTGATGAGGTCTATG+GGG - chr8.2:48532064-48532083 MS.gene032345:CDS 45.0%
!! CCTGCTTTTGTTGCAGAGTA+CGG + chr8.2:48532149-48532168 None:intergenic 45.0%
!! CTGCTTTTGTTGCAGAGTAC+GGG + chr8.2:48532148-48532167 None:intergenic 45.0%
!! GTCAGTACTGATGAGGTCTA+TGG - chr8.2:48532062-48532081 MS.gene032345:CDS 45.0%
!! TCTTGCTGTTTGGTAGGACA+GGG - chr8.2:48532831-48532850 MS.gene032345:CDS 45.0%
!! TTCTTGCTGTTTGGTAGGAC+AGG - chr8.2:48532830-48532849 MS.gene032345:CDS 45.0%
AAAACCTTGGTTGGGCTGAG+AGG - chr8.2:48532567-48532586 MS.gene032345:CDS 50.0%
AAGTGCCAGCAACATTAGCG+CGG + chr8.2:48533051-48533070 None:intergenic 50.0%
ACTCTTCCGATTCATGGGGA+TGG - chr8.2:48532308-48532327 MS.gene032345:CDS 50.0%
AGGAGCGGAAATGCTTGTCA+TGG - chr8.2:48532166-48532185 MS.gene032345:intron 50.0%
AGGTTACTGGCCAGATCAGA+AGG - chr8.2:48532030-48532049 MS.gene032345:CDS 50.0%
CACTCTTGAAGAGCAAGCCA+AGG - chr8.2:48533623-48533642 MS.gene032345:CDS 50.0%
CCAGGCATCATCAACATCCT+CGG + chr8.2:48532686-48532705 None:intergenic 50.0%
CCGGAAGACCCAATGTTGAT+TGG - chr8.2:48532999-48533018 MS.gene032345:CDS 50.0%
CCGTACTCTGCAACAAAAGC+AGG - chr8.2:48532146-48532165 MS.gene032345:intron 50.0%
CTCTGCAACAAAAGCAGGAG+CGG - chr8.2:48532151-48532170 MS.gene032345:intron 50.0%
CTTCAGTCCTTCATCCCATG+TGG + chr8.2:48532594-48532613 None:intergenic 50.0%
GGGAGTTATCGATGTAGCCA+AGG - chr8.2:48532442-48532461 MS.gene032345:CDS 50.0%
GTGGCAGTGTTCTTGGTTGA+TGG + chr8.2:48532788-48532807 None:intergenic 50.0%
GTTCTTCACAAGGGAGAGGT+TGG - chr8.2:48532386-48532405 MS.gene032345:CDS 50.0%
GTTGCAGAGTACGGGTTTGT+GGG + chr8.2:48532140-48532159 None:intergenic 50.0%
TACGATGCAGCACATCCAGA+AGG - chr8.2:48533142-48533161 MS.gene032345:CDS 50.0%
TGTTGCAGAGTACGGGTTTG+TGG + chr8.2:48532141-48532160 None:intergenic 50.0%
TTTGGTAGGACAGGGTGGAT+TGG - chr8.2:48532839-48532858 MS.gene032345:CDS 50.0%
! CAAAGGATGTTTCTGCGGAG+TGG + chr8.2:48532807-48532826 None:intergenic 50.0%
! CCCCCACCAATCAGGATTTT+TGG + chr8.2:48532636-48532655 None:intergenic 50.0%
! TGATGCGGGATTTTCGCCTT+CGG + chr8.2:48532735-48532754 None:intergenic 50.0%
!! AGGATGTTGATGATGCCTGG+TGG - chr8.2:48532686-48532705 MS.gene032345:CDS 50.0%
!! GTTGATGATGCCTGGTGGAA+TGG - chr8.2:48532691-48532710 MS.gene032345:CDS 50.0%
AAACCAATGCCGGAGCCTTC+TGG + chr8.2:48533160-48533179 None:intergenic 55.0%
ACCATCCGCGCTAATGTTGC+TGG - chr8.2:48533043-48533062 MS.gene032345:CDS 55.0%
ATCCAGCTGCCCCAGTAATG+AGG + chr8.2:48531704-48531723 None:intergenic 55.0%
ATCCTCATTACTGGGGCAGC+TGG - chr8.2:48531699-48531718 MS.gene032345:CDS 55.0%
CATTGTGGCTCACAGCACCA+GGG + chr8.2:48533548-48533567 None:intergenic 55.0%
GAGAGGACCACATGGGATGA+AGG - chr8.2:48532584-48532603 MS.gene032345:CDS 55.0%
GATCTGGCCAGTAACCTTGC+AGG + chr8.2:48532027-48532046 None:intergenic 55.0%
GCTGATGTGTGCAGAGAGCA+CGG - chr8.2:48533079-48533098 MS.gene032345:CDS 55.0%
GTGCATTGCTTCCTCATCCG+AGG - chr8.2:48532666-48532685 MS.gene032345:CDS 55.0%
TCATTGTGGCTCACAGCACC+AGG + chr8.2:48533549-48533568 None:intergenic 55.0%
TCGAGCAGCGACAATCACCT+TGG + chr8.2:48533643-48533662 None:intergenic 55.0%
TTGGGCTGAGAGGACCACAT+GGG - chr8.2:48532577-48532596 MS.gene032345:CDS 55.0%
! CTGATGTGTGCAGAGAGCAC+GGG - chr8.2:48533080-48533099 MS.gene032345:CDS 55.0%
! TGCTGTTTGGTAGGACAGGG+TGG - chr8.2:48532834-48532853 MS.gene032345:CDS 55.0%
!! AGGCTCCGGCATTGGTTTCA+AGG - chr8.2:48533162-48533181 MS.gene032345:CDS 55.0%
!! AGGGTGGATTGGAGGTTTGC+TGG - chr8.2:48532850-48532869 MS.gene032345:CDS 55.0%
!! CCGAGGATGTTGATGATGCC+TGG - chr8.2:48532683-48532702 MS.gene032345:CDS 55.0%
!! CTCCGGCATTGGTTTCAAGG+AGG - chr8.2:48533165-48533184 MS.gene032345:CDS 55.0%
!! GGGTGGATTGGAGGTTTGCT+GGG - chr8.2:48532851-48532870 MS.gene032345:CDS 55.0%
!! GGTGGATTGGAGGTTTGCTG+GGG - chr8.2:48532852-48532871 MS.gene032345:CDS 55.0%
ATGGCTTCGGACAAGCCGGT+TGG + chr8.2:48531745-48531764 None:intergenic 60.0%
CATCCAGAAGGCTCCGGCAT+TGG - chr8.2:48533154-48533173 MS.gene032345:CDS 60.0%
CTGACATCCCCCCACCAATC+AGG + chr8.2:48532644-48532663 None:intergenic 60.0%
CTGCGGAGTGGCAGTGTTCT+TGG + chr8.2:48532795-48532814 None:intergenic 60.0%
GATTGGTGGGGGGATGTCAG+TGG - chr8.2:48532644-48532663 MS.gene032345:CDS 60.0%
GCAGCACATCCAGAAGGCTC+CGG - chr8.2:48533148-48533167 MS.gene032345:CDS 60.0%
GCCAGCAACATTAGCGCGGA+TGG + chr8.2:48533047-48533066 None:intergenic 60.0%
GTTGGGCTGAGAGGACCACA+TGG - chr8.2:48532576-48532595 MS.gene032345:CDS 60.0%
TGGTCCTCTCAGCCCAACCA+AGG + chr8.2:48532574-48532593 None:intergenic 60.0%
!! GGTAGGACAGGGTGGATTGG+AGG - chr8.2:48532842-48532861 MS.gene032345:CDS 60.0%
CGGGATGGCTTCGGACAAGC+CGG + chr8.2:48531749-48531768 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 48531675 48533770 48531675 ID=MS.gene032345
chr8.2 mRNA 48531675 48533770 48531675 ID=MS.gene032345.t1;Parent=MS.gene032345
chr8.2 exon 48532208 48533770 48532208 ID=MS.gene032345.t1.exon1;Parent=MS.gene032345.t1
chr8.2 CDS 48532208 48533770 48532208 ID=cds.MS.gene032345.t1;Parent=MS.gene032345.t1
chr8.2 exon 48531675 48532118 48531675 ID=MS.gene032345.t1.exon2;Parent=MS.gene032345.t1
chr8.2 CDS 48531675 48532118 48531675 ID=cds.MS.gene032345.t1;Parent=MS.gene032345.t1
Gene Sequence

>MS.gene032345

ATGGCTTCGTATACACCGAAGAATATCCTCATTACTGGGGCAGCTGGATTTATTGCATCTCATGTTGCCAACCGGCTTGTCCGAAGCCATCCCGAGTACAAAATTGTTGTGCTTGATAAACTAGATTATTGTTCTAATTTAAAGAATCTCCTTCCTTCGAAATCATCTCCCAACTTTAAGTTTGTCAAGGGGGATATCGGTAGTGCTGATCTTGTCAACTACTTGCTTATTACGGAGTCGATTGACACGATAATGCACTTTGCTGCTCAAACTCATGTCGACAACTCATTTGGTAATAGTTTTGAGTTCACCAAGAACAACATATACGGAACTCATGTCTTATTAGAAGCCTGCAAGGTTACTGGCCAGATCAGAAGGTTCATTCATGTCAGTACTGATGAGGTCTATGGGGAGACCGATGAAGATGCTATTGTTGGAAACCATGAGGCTTCTCAACTTCTTCCCACAAACCCGTACTCTGCAACAAAAGCAGGAGCGGAAATGCTTGTCATGGCATATGGTAGGTCATACGGGTTACCTGTTATCACAACACGTGGAAACAATGTTTATGGGCCAAATCAGTTTCCCGAGAAATTGATTCCAAAGTTCATCCTTTTGGCTATGCAAGGAAAGACTCTTCCGATTCATGGGGATGGTTCTAATGTGAGGAGTTATTTGTATTGCGAAGATGTTGCTGAGGCATTTGAAGTTGTTCTTCACAAGGGAGAGGTTGGCCATGTTTACAATATCGGGACAAAGAAGGAAAGGGGAGTTATCGATGTAGCCAAGGATATATGCAGGCTTTTCTCGATGGATCCAGAAGCTAACATTAAATTTGTTGAGAACAGACCGTTTAATGACCAGAGATACTTTCTCGATGATCAGAAGCTGAAAAACCTTGGTTGGGCTGAGAGGACCACATGGGATGAAGGACTGAAGAAAACCATAGAATGGTATACCAAAAATCCTGATTGGTGGGGGGATGTCAGTGGTGCATTGCTTCCTCATCCGAGGATGTTGATGATGCCTGGTGGAATGGAGAGACATTTTGAAGGATCCGAAGGCGAAAATCCCGCATCAGTCAATTCATCTAATACTCGTATGGTGGTCCCATCAACCAAGAACACTGCCACTCCGCAGAAACATCCTTTGAAGTTCTTGCTGTTTGGTAGGACAGGGTGGATTGGAGGTTTGCTGGGGAAATTGTGTGAAAAGCAAGGAATTCCATATGAATACGCAAAGGGTCGTCTAGAAGATCGTGCATCACTCATTTCTGATATTCAGAATGTGAAGCCAACCCATGTTTTTAATGCTGCAGGTGTCACCGGAAGACCCAATGTTGATTGGTGCGAAACTCATAAAACAGAAACCATCCGCGCTAATGTTGCTGGCACTTTAACATTGGCTGATGTGTGCAGAGAGCACGGGATCTTGATGATAAATTATGCTACTGGCTGCATATTTGAGTACGATGCAGCACATCCAGAAGGCTCCGGCATTGGTTTCAAGGAGGAAGACAAGCCCAATTTCATGGGATCTTTCTATTCCAAAACTAAAGCTATGGTAAGTTTCCTTAAATAGAACGATCTTATTTATCACCTTTGCATTATGAATTTTTTTCAAACAGTAACTTTTAATTGAATTTTGATCAGGTTGAGGAACTCTTGAGAGAATATGACAATGTATGCACCCTTAGGGTTCGTATGCCGATTTCATCTGATCTGAGCAACCCACGCAACTTCATCACAAAGATTTCTCGTTATAACAAAGTTGTCAACATTCCAAACAGCATGACAGTATTGGATGAACTTCTACCTATTTCAATCGAGATGGCAAAGAGAAACTTGAGTGGAATCTGGAACTTCACTAACCCTGGTGCTGTGAGCCACAATGAGATCCTTGAGATGTATAGGGATTACATTGACCCCAGTTTCAAGTGGCAGAATTTCACTCTTGAAGAGCAAGCCAAGGTGATTGTCGCTGCTCGAAGCAACAATGAGATGGATGGTGCCAAATTAAAGAAAGAATTCCCAGAATTGCTTTCCATCAAAGAATCACTTATCAAGTATGTCTTCGTGCCAAACAAGAAGAAATAA
Protein sequence

>MS.gene032345.t1

MASYTPKNILITGAAGFIASHVANRLVRSHPEYKIVVLDKLDYCSNLKNLLPSKSSPNFKFVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAIVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKTLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERGVIDVAKDICRLFSMDPEANIKFVENRPFNDQRYFLDDQKLKNLGWAERTTWDEGLKKTIEWYTKNPDWWGDVSGALLPHPRMLMMPGGMERHFEGSEGENPASVNSSNTRMVVPSTKNTATPQKHPLKFLLFGRTGWIGGLLGKLCEKQGIPYEYAKGRLEDRASLISDIQNVKPTHVFNAAGVTGRPNVDWCETHKTETIRANVAGTLTLADVCREHGILMINYATGCIFEYDAAHPEGSGIGFKEEDKPNFMGSFYSKTKAMVEELLREYDNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLSGIWNFTNPGAVSHNEILEMYRDYIDPSFKWQNFTLEEQAKVIVAARSNNEMDGAKLKKEFPELLSIKESLIKYVFVPNKKK