Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033113.t1 | XP_013457910.1 | 95 | 360 | 7 | 2 | 1 | 350 | 1 | 359 | 2.00E-193 | 684.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033113.t1 | Q9FLJ2 | 57.0 | 351 | 118 | 10 | 10 | 350 | 9 | 336 | 9.0e-102 | 371.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033113.t1 | A0A072URG4 | 95.0 | 360 | 7 | 2 | 1 | 350 | 1 | 359 | 1.4e-193 | 684.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene033113.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene061729 | MS.gene033113 | PPI |
MS.gene033113 | MS.gene58420 | PPI |
MS.gene044393 | MS.gene033113 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033113.t1 | MTR_4g108760 | 95.000 | 360 | 7 | 2 | 1 | 350 | 1 | 359 | 0.0 | 702 |
MS.gene033113.t1 | MTR_3g435150 | 65.938 | 320 | 80 | 8 | 1 | 309 | 1 | 302 | 7.36e-133 | 381 |
MS.gene033113.t1 | MTR_6g012670 | 59.426 | 244 | 78 | 5 | 12 | 238 | 15 | 254 | 7.98e-95 | 285 |
MS.gene033113.t1 | MTR_6g032770 | 48.725 | 353 | 145 | 11 | 2 | 323 | 3 | 350 | 1.10e-91 | 279 |
MS.gene033113.t1 | MTR_7g085260 | 45.293 | 393 | 162 | 15 | 1 | 350 | 1 | 383 | 5.94e-89 | 272 |
MS.gene033113.t1 | MTR_3g070030 | 45.994 | 337 | 151 | 8 | 11 | 330 | 13 | 335 | 2.26e-82 | 254 |
MS.gene033113.t1 | MTR_2g078700 | 80.282 | 142 | 26 | 1 | 17 | 156 | 23 | 164 | 7.79e-80 | 249 |
MS.gene033113.t1 | MTR_6g084430 | 63.590 | 195 | 56 | 3 | 16 | 195 | 4 | 198 | 1.43e-79 | 246 |
MS.gene033113.t1 | MTR_7g011130 | 49.446 | 271 | 105 | 5 | 11 | 249 | 13 | 283 | 1.99e-73 | 231 |
MS.gene033113.t1 | MTR_7g011120 | 75.352 | 142 | 34 | 1 | 11 | 151 | 2 | 143 | 2.08e-72 | 227 |
MS.gene033113.t1 | MTR_1g008740 | 66.061 | 165 | 45 | 4 | 9 | 163 | 6 | 169 | 3.19e-71 | 226 |
MS.gene033113.t1 | MTR_1g008740 | 63.372 | 172 | 52 | 4 | 2 | 163 | 13 | 183 | 5.77e-71 | 225 |
MS.gene033113.t1 | MTR_3g109340 | 62.353 | 170 | 56 | 2 | 2 | 163 | 7 | 176 | 4.08e-70 | 223 |
MS.gene033113.t1 | MTR_3g109340 | 61.988 | 171 | 56 | 2 | 2 | 163 | 7 | 177 | 5.68e-70 | 223 |
MS.gene033113.t1 | MTR_3g070040 | 41.274 | 361 | 164 | 14 | 11 | 350 | 2 | 335 | 4.18e-65 | 209 |
MS.gene033113.t1 | MTR_3g116070 | 63.354 | 161 | 54 | 4 | 2 | 157 | 7 | 167 | 4.03e-63 | 205 |
MS.gene033113.t1 | MTR_2g064470 | 44.487 | 263 | 115 | 8 | 1 | 254 | 1 | 241 | 3.24e-60 | 196 |
MS.gene033113.t1 | MTR_4g036030 | 62.308 | 130 | 46 | 1 | 17 | 143 | 7 | 136 | 2.88e-55 | 184 |
MS.gene033113.t1 | MTR_4g101680 | 64.615 | 130 | 43 | 1 | 17 | 143 | 7 | 136 | 3.54e-55 | 184 |
MS.gene033113.t1 | MTR_5g012080 | 62.595 | 131 | 45 | 2 | 17 | 143 | 7 | 137 | 2.73e-54 | 182 |
MS.gene033113.t1 | MTR_5g041940 | 61.538 | 130 | 50 | 0 | 15 | 144 | 1 | 130 | 3.31e-54 | 179 |
MS.gene033113.t1 | MTR_4g035590 | 64.615 | 130 | 43 | 1 | 17 | 143 | 8 | 137 | 6.90e-54 | 181 |
MS.gene033113.t1 | MTR_5g021710 | 59.231 | 130 | 50 | 1 | 17 | 143 | 8 | 137 | 1.14e-53 | 180 |
MS.gene033113.t1 | MTR_8g076110 | 56.835 | 139 | 54 | 2 | 17 | 152 | 6 | 141 | 1.49e-53 | 179 |
MS.gene033113.t1 | MTR_2g064090 | 62.308 | 130 | 47 | 1 | 15 | 142 | 4 | 133 | 2.29e-53 | 179 |
MS.gene033113.t1 | MTR_7g085220 | 59.420 | 138 | 47 | 2 | 14 | 142 | 5 | 142 | 4.41e-53 | 178 |
MS.gene033113.t1 | MTR_2157s0010 | 54.375 | 160 | 61 | 2 | 17 | 173 | 8 | 158 | 6.51e-53 | 176 |
MS.gene033113.t1 | MTR_8g024480 | 57.241 | 145 | 56 | 2 | 2 | 143 | 3 | 144 | 7.22e-53 | 180 |
MS.gene033113.t1 | MTR_7g100990 | 54.321 | 162 | 58 | 2 | 14 | 173 | 8 | 155 | 9.27e-53 | 177 |
MS.gene033113.t1 | MTR_1g069805 | 58.915 | 129 | 51 | 1 | 17 | 143 | 10 | 138 | 1.24e-52 | 175 |
MS.gene033113.t1 | MTR_4g081870 | 55.063 | 158 | 57 | 3 | 16 | 173 | 8 | 151 | 1.43e-52 | 175 |
MS.gene033113.t1 | MTR_2g080010 | 59.091 | 132 | 52 | 1 | 13 | 142 | 11 | 142 | 1.49e-52 | 177 |
MS.gene033113.t1 | MTR_3g088110 | 62.016 | 129 | 48 | 1 | 14 | 142 | 4 | 131 | 2.18e-52 | 175 |
MS.gene033113.t1 | MTR_4g089135 | 52.174 | 161 | 75 | 1 | 17 | 175 | 15 | 175 | 2.86e-52 | 176 |
MS.gene033113.t1 | MTR_2g079990 | 61.240 | 129 | 50 | 0 | 14 | 142 | 13 | 141 | 1.73e-51 | 175 |
MS.gene033113.t1 | MTR_7g097090 | 58.140 | 129 | 52 | 1 | 17 | 143 | 10 | 138 | 3.10e-51 | 172 |
MS.gene033113.t1 | MTR_2g079990 | 61.240 | 129 | 50 | 0 | 14 | 142 | 13 | 141 | 3.45e-51 | 174 |
MS.gene033113.t1 | MTR_8g059170 | 59.420 | 138 | 56 | 0 | 14 | 151 | 11 | 148 | 3.47e-51 | 173 |
MS.gene033113.t1 | MTR_2g062730 | 58.955 | 134 | 51 | 2 | 14 | 143 | 7 | 140 | 3.82e-51 | 173 |
MS.gene033113.t1 | MTR_8g094580 | 49.735 | 189 | 70 | 5 | 15 | 203 | 5 | 168 | 7.56e-51 | 171 |
MS.gene033113.t1 | MTR_3g096920 | 49.474 | 190 | 70 | 5 | 14 | 203 | 4 | 167 | 1.68e-50 | 170 |
MS.gene033113.t1 | MTR_6g477900 | 58.015 | 131 | 53 | 1 | 17 | 145 | 6 | 136 | 3.65e-50 | 167 |
MS.gene033113.t1 | MTR_5g076850 | 58.647 | 133 | 53 | 1 | 15 | 145 | 4 | 136 | 6.25e-50 | 177 |
MS.gene033113.t1 | MTR_1g096430 | 54.610 | 141 | 59 | 2 | 17 | 154 | 7 | 145 | 6.38e-50 | 170 |
MS.gene033113.t1 | MTR_3g064580 | 60.150 | 133 | 51 | 1 | 15 | 145 | 4 | 136 | 6.69e-50 | 177 |
MS.gene033113.t1 | MTR_3g096920 | 54.902 | 153 | 57 | 2 | 14 | 166 | 4 | 144 | 9.98e-50 | 169 |
MS.gene033113.t1 | MTR_5g014300 | 46.809 | 188 | 77 | 5 | 17 | 181 | 6 | 193 | 1.35e-49 | 169 |
MS.gene033113.t1 | MTR_2g093810 | 50.314 | 159 | 63 | 2 | 17 | 173 | 14 | 158 | 1.43e-48 | 166 |
MS.gene033113.t1 | MTR_8g467490 | 46.409 | 181 | 91 | 3 | 19 | 193 | 16 | 196 | 1.06e-47 | 166 |
MS.gene033113.t1 | MTR_6g011860 | 57.031 | 128 | 54 | 1 | 16 | 142 | 14 | 141 | 2.98e-47 | 164 |
MS.gene033113.t1 | MTR_5g040420 | 57.463 | 134 | 53 | 2 | 13 | 142 | 8 | 141 | 3.76e-47 | 164 |
MS.gene033113.t1 | MTR_7g005280 | 55.556 | 135 | 55 | 2 | 10 | 142 | 8 | 139 | 7.35e-47 | 160 |
MS.gene033113.t1 | MTR_4g098630 | 47.059 | 170 | 77 | 3 | 13 | 169 | 2 | 171 | 1.15e-46 | 161 |
MS.gene033113.t1 | MTR_3g093050 | 59.843 | 127 | 49 | 1 | 17 | 141 | 22 | 148 | 5.24e-46 | 165 |
MS.gene033113.t1 | MTR_3g093050 | 59.843 | 127 | 49 | 1 | 17 | 141 | 22 | 148 | 6.40e-46 | 165 |
MS.gene033113.t1 | MTR_5g069030 | 56.643 | 143 | 53 | 3 | 2 | 141 | 15 | 151 | 1.15e-45 | 165 |
MS.gene033113.t1 | MTR_3g093040 | 56.589 | 129 | 54 | 1 | 15 | 141 | 106 | 234 | 3.00e-45 | 157 |
MS.gene033113.t1 | MTR_3g096140 | 54.264 | 129 | 57 | 1 | 19 | 145 | 9 | 137 | 2.29e-44 | 154 |
MS.gene033113.t1 | MTR_1g097300 | 53.383 | 133 | 60 | 1 | 13 | 143 | 15 | 147 | 1.10e-43 | 159 |
MS.gene033113.t1 | MTR_3g096140 | 54.264 | 129 | 57 | 1 | 19 | 145 | 9 | 137 | 1.47e-43 | 154 |
MS.gene033113.t1 | MTR_2g086880 | 56.098 | 123 | 53 | 1 | 19 | 140 | 20 | 142 | 2.68e-43 | 157 |
MS.gene033113.t1 | MTR_1g090723 | 47.222 | 180 | 80 | 5 | 19 | 185 | 10 | 187 | 3.59e-43 | 157 |
MS.gene033113.t1 | MTR_1g090723 | 47.222 | 180 | 80 | 5 | 19 | 185 | 10 | 187 | 3.69e-43 | 158 |
MS.gene033113.t1 | MTR_2g086880 | 56.098 | 123 | 53 | 1 | 19 | 140 | 20 | 142 | 4.26e-43 | 157 |
MS.gene033113.t1 | MTR_5g090970 | 48.980 | 147 | 70 | 2 | 4 | 145 | 3 | 149 | 5.64e-43 | 151 |
MS.gene033113.t1 | MTR_1g090723 | 56.589 | 129 | 49 | 3 | 19 | 142 | 10 | 136 | 1.58e-42 | 156 |
MS.gene033113.t1 | MTR_8g063550 | 51.908 | 131 | 61 | 1 | 17 | 145 | 6 | 136 | 3.44e-42 | 150 |
MS.gene033113.t1 | MTR_4g134460 | 54.688 | 128 | 51 | 2 | 19 | 142 | 56 | 180 | 3.83e-42 | 152 |
MS.gene033113.t1 | MTR_1g090720 | 57.143 | 126 | 52 | 1 | 17 | 140 | 42 | 167 | 4.34e-42 | 153 |
MS.gene033113.t1 | MTR_0036s0150 | 50.955 | 157 | 63 | 4 | 19 | 163 | 7 | 161 | 4.46e-42 | 154 |
MS.gene033113.t1 | MTR_8g063550 | 51.908 | 131 | 61 | 1 | 17 | 145 | 6 | 136 | 6.00e-42 | 151 |
MS.gene033113.t1 | MTR_5g090970 | 48.980 | 147 | 69 | 3 | 4 | 145 | 3 | 148 | 8.80e-42 | 148 |
MS.gene033113.t1 | MTR_8g063550 | 51.908 | 131 | 61 | 1 | 17 | 145 | 6 | 136 | 1.19e-41 | 151 |
MS.gene033113.t1 | MTR_4g075980 | 48.276 | 145 | 67 | 3 | 1 | 142 | 4 | 143 | 4.17e-41 | 146 |
MS.gene033113.t1 | MTR_2g068880 | 49.324 | 148 | 65 | 4 | 1 | 142 | 9 | 152 | 3.40e-40 | 144 |
MS.gene033113.t1 | MTR_8g093580 | 49.618 | 131 | 64 | 1 | 17 | 145 | 6 | 136 | 4.70e-40 | 147 |
MS.gene033113.t1 | MTR_2g068920 | 51.880 | 133 | 58 | 3 | 16 | 142 | 19 | 151 | 1.40e-39 | 142 |
MS.gene033113.t1 | MTR_8g023840 | 51.079 | 139 | 62 | 5 | 7 | 140 | 1 | 138 | 7.31e-38 | 140 |
MS.gene033113.t1 | MTR_8g099750 | 46.875 | 128 | 64 | 2 | 17 | 142 | 14 | 139 | 8.59e-36 | 130 |
MS.gene033113.t1 | MTR_3g098810 | 43.836 | 146 | 73 | 3 | 1 | 142 | 1 | 141 | 1.81e-34 | 125 |
MS.gene033113.t1 | MTR_3g096140 | 51.304 | 115 | 54 | 1 | 33 | 145 | 2 | 116 | 4.30e-34 | 128 |
MS.gene033113.t1 | MTR_3g098810 | 46.923 | 130 | 63 | 2 | 17 | 142 | 14 | 141 | 7.62e-34 | 125 |
MS.gene033113.t1 | MTR_8g023860 | 49.231 | 130 | 60 | 5 | 17 | 141 | 12 | 140 | 2.81e-33 | 128 |
MS.gene033113.t1 | MTR_4g052620 | 45.038 | 131 | 66 | 3 | 17 | 141 | 5 | 135 | 7.31e-31 | 118 |
MS.gene033113.t1 | MTR_8g094580 | 50.000 | 138 | 44 | 5 | 66 | 203 | 2 | 114 | 2.76e-30 | 115 |
MS.gene033113.t1 | MTR_2g086690 | 38.272 | 162 | 91 | 4 | 16 | 168 | 3 | 164 | 9.60e-30 | 114 |
MS.gene033113.t1 | MTR_8g023900 | 45.736 | 129 | 64 | 5 | 17 | 140 | 12 | 139 | 1.59e-28 | 115 |
MS.gene033113.t1 | MTR_8g023900 | 42.537 | 134 | 66 | 6 | 17 | 140 | 188 | 320 | 9.02e-27 | 110 |
MS.gene033113.t1 | MTR_8g023880 | 47.222 | 144 | 54 | 7 | 17 | 141 | 7 | 147 | 1.82e-28 | 112 |
MS.gene033113.t1 | MTR_8g023930 | 43.411 | 129 | 67 | 5 | 17 | 140 | 24 | 151 | 1.76e-27 | 112 |
MS.gene033113.t1 | MTR_4g094302 | 41.406 | 128 | 65 | 2 | 17 | 142 | 11 | 130 | 2.47e-27 | 105 |
MS.gene033113.t1 | MTR_4g094302 | 41.406 | 128 | 65 | 2 | 17 | 142 | 11 | 130 | 6.11e-27 | 105 |
MS.gene033113.t1 | MTR_7g105170 | 40.602 | 133 | 72 | 4 | 16 | 141 | 3 | 135 | 2.43e-26 | 105 |
MS.gene033113.t1 | MTR_7g070140 | 51.250 | 80 | 37 | 1 | 70 | 147 | 17 | 96 | 1.03e-22 | 92.8 |
MS.gene033113.t1 | MTR_8g093790 | 42.857 | 126 | 56 | 4 | 17 | 142 | 10 | 119 | 2.37e-21 | 90.5 |
MS.gene033113.t1 | MTR_3g096400 | 40.441 | 136 | 65 | 6 | 13 | 142 | 3 | 128 | 7.62e-19 | 84.0 |
MS.gene033113.t1 | MTR_7g083360 | 32.308 | 130 | 82 | 5 | 14 | 140 | 7 | 133 | 4.27e-17 | 77.8 |
MS.gene033113.t1 | MTR_7g083330 | 31.818 | 132 | 84 | 5 | 12 | 140 | 13 | 141 | 2.47e-15 | 73.9 |
MS.gene033113.t1 | MTR_7g083370 | 30.769 | 130 | 80 | 5 | 16 | 140 | 9 | 133 | 5.81e-15 | 71.6 |
MS.gene033113.t1 | MTR_8g102240 | 32.237 | 152 | 77 | 5 | 15 | 142 | 45 | 194 | 5.41e-11 | 63.9 |
MS.gene033113.t1 | MTR_8g102240 | 32.237 | 152 | 77 | 5 | 15 | 142 | 45 | 194 | 5.42e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene033113.t1 | AT5G61430 | 57.465 | 355 | 110 | 12 | 10 | 350 | 9 | 336 | 7.27e-133 | 382 |
MS.gene033113.t1 | AT5G07680 | 53.994 | 363 | 120 | 14 | 1 | 350 | 1 | 329 | 8.21e-120 | 349 |
MS.gene033113.t1 | AT5G07680 | 54.755 | 347 | 114 | 14 | 15 | 350 | 1 | 315 | 8.04e-116 | 338 |
MS.gene033113.t1 | AT5G61430 | 53.512 | 299 | 98 | 12 | 66 | 350 | 2 | 273 | 7.91e-94 | 281 |
MS.gene033113.t1 | AT3G29035 | 74.317 | 183 | 41 | 2 | 10 | 191 | 17 | 194 | 1.16e-92 | 280 |
MS.gene033113.t1 | AT5G39610 | 66.038 | 212 | 56 | 3 | 10 | 211 | 13 | 218 | 2.91e-92 | 277 |
MS.gene033113.t1 | AT5G18270 | 43.651 | 378 | 138 | 10 | 1 | 350 | 5 | 335 | 6.76e-89 | 270 |
MS.gene033113.t1 | AT5G18270 | 43.386 | 378 | 139 | 10 | 1 | 350 | 5 | 335 | 2.04e-88 | 269 |
MS.gene033113.t1 | AT3G15170 | 63.107 | 206 | 70 | 4 | 11 | 211 | 15 | 219 | 1.43e-82 | 253 |
MS.gene033113.t1 | AT3G04060 | 44.745 | 333 | 139 | 4 | 4 | 321 | 7 | 309 | 1.51e-82 | 254 |
MS.gene033113.t1 | AT5G53950 | 80.282 | 142 | 26 | 1 | 17 | 156 | 17 | 158 | 2.62e-80 | 250 |
MS.gene033113.t1 | AT3G18400 | 55.263 | 228 | 89 | 5 | 16 | 234 | 4 | 227 | 9.22e-77 | 239 |
MS.gene033113.t1 | AT2G24430 | 66.871 | 163 | 43 | 3 | 10 | 163 | 11 | 171 | 7.09e-71 | 224 |
MS.gene033113.t1 | AT2G24430 | 66.871 | 163 | 43 | 3 | 10 | 163 | 11 | 171 | 7.09e-71 | 224 |
MS.gene033113.t1 | AT1G76420 | 67.123 | 146 | 46 | 1 | 4 | 147 | 9 | 154 | 2.49e-65 | 210 |
MS.gene033113.t1 | AT3G12977 | 44.954 | 218 | 100 | 4 | 16 | 223 | 17 | 224 | 6.47e-59 | 192 |
MS.gene033113.t1 | AT1G56010 | 39.858 | 281 | 138 | 9 | 17 | 281 | 19 | 284 | 3.09e-58 | 191 |
MS.gene033113.t1 | AT1G12260 | 63.846 | 130 | 44 | 1 | 17 | 143 | 7 | 136 | 1.49e-55 | 185 |
MS.gene033113.t1 | AT1G12260 | 63.846 | 130 | 44 | 1 | 17 | 143 | 7 | 136 | 1.96e-55 | 186 |
MS.gene033113.t1 | AT3G04070 | 58.333 | 156 | 56 | 3 | 11 | 161 | 4 | 155 | 2.67e-55 | 184 |
MS.gene033113.t1 | AT3G04070 | 58.333 | 156 | 56 | 3 | 11 | 161 | 4 | 155 | 4.04e-55 | 184 |
MS.gene033113.t1 | AT4G27410 | 63.566 | 129 | 47 | 0 | 14 | 142 | 11 | 139 | 1.23e-54 | 181 |
MS.gene033113.t1 | AT1G62700 | 63.846 | 130 | 44 | 1 | 17 | 143 | 7 | 136 | 3.12e-54 | 183 |
MS.gene033113.t1 | AT1G62700 | 63.846 | 130 | 44 | 1 | 17 | 143 | 7 | 136 | 3.12e-54 | 183 |
MS.gene033113.t1 | AT4G10350 | 63.077 | 130 | 45 | 1 | 17 | 143 | 9 | 138 | 4.27e-54 | 181 |
MS.gene033113.t1 | AT2G18060 | 58.955 | 134 | 52 | 1 | 13 | 143 | 5 | 138 | 5.66e-54 | 181 |
MS.gene033113.t1 | AT2G18060 | 58.955 | 134 | 52 | 1 | 13 | 143 | 5 | 138 | 5.66e-54 | 181 |
MS.gene033113.t1 | AT4G36160 | 58.519 | 135 | 53 | 1 | 12 | 143 | 5 | 139 | 8.12e-54 | 181 |
MS.gene033113.t1 | AT4G36160 | 58.519 | 135 | 53 | 1 | 12 | 143 | 5 | 139 | 8.12e-54 | 181 |
MS.gene033113.t1 | AT4G36160 | 58.519 | 135 | 53 | 1 | 12 | 143 | 9 | 143 | 9.54e-54 | 181 |
MS.gene033113.t1 | AT1G33280 | 61.538 | 130 | 47 | 1 | 17 | 143 | 8 | 137 | 4.78e-53 | 177 |
MS.gene033113.t1 | AT5G62380 | 61.538 | 130 | 47 | 1 | 17 | 143 | 7 | 136 | 6.94e-53 | 178 |
MS.gene033113.t1 | AT5G62380 | 61.538 | 130 | 47 | 1 | 17 | 143 | 7 | 136 | 6.94e-53 | 178 |
MS.gene033113.t1 | AT1G71930 | 57.692 | 130 | 52 | 1 | 17 | 143 | 9 | 138 | 1.82e-52 | 176 |
MS.gene033113.t1 | AT1G71930 | 57.692 | 130 | 52 | 1 | 17 | 143 | 9 | 138 | 1.82e-52 | 176 |
MS.gene033113.t1 | AT2G46770 | 60.769 | 130 | 48 | 1 | 17 | 143 | 16 | 145 | 2.70e-52 | 177 |
MS.gene033113.t1 | AT4G35580 | 62.992 | 127 | 45 | 1 | 17 | 141 | 9 | 135 | 2.89e-52 | 181 |
MS.gene033113.t1 | AT4G35580 | 62.992 | 127 | 45 | 1 | 17 | 141 | 9 | 135 | 4.16e-52 | 181 |
MS.gene033113.t1 | AT4G35580 | 62.992 | 127 | 45 | 1 | 17 | 141 | 9 | 135 | 4.39e-52 | 181 |
MS.gene033113.t1 | AT1G01720 | 61.538 | 130 | 49 | 1 | 13 | 142 | 3 | 131 | 7.35e-52 | 174 |
MS.gene033113.t1 | AT3G61910 | 57.692 | 130 | 52 | 1 | 17 | 143 | 11 | 140 | 1.08e-51 | 175 |
MS.gene033113.t1 | AT5G66300 | 56.391 | 133 | 55 | 1 | 11 | 140 | 6 | 138 | 1.42e-51 | 173 |
MS.gene033113.t1 | AT1G69490 | 54.777 | 157 | 57 | 2 | 17 | 173 | 9 | 151 | 1.73e-51 | 172 |
MS.gene033113.t1 | AT3G10500 | 55.414 | 157 | 60 | 3 | 17 | 163 | 9 | 165 | 2.34e-51 | 179 |
MS.gene033113.t1 | AT1G33060 | 60.305 | 131 | 50 | 1 | 17 | 145 | 24 | 154 | 2.48e-51 | 181 |
MS.gene033113.t1 | AT1G33060 | 60.305 | 131 | 50 | 1 | 17 | 145 | 24 | 154 | 2.58e-51 | 181 |
MS.gene033113.t1 | AT5G46590 | 60.465 | 129 | 48 | 2 | 17 | 142 | 6 | 134 | 5.04e-51 | 171 |
MS.gene033113.t1 | AT5G04410 | 63.281 | 128 | 45 | 1 | 17 | 142 | 9 | 136 | 5.70e-51 | 178 |
MS.gene033113.t1 | AT1G61110 | 59.574 | 141 | 52 | 2 | 17 | 156 | 16 | 152 | 6.99e-51 | 172 |
MS.gene033113.t1 | AT5G46590 | 60.465 | 129 | 48 | 2 | 17 | 142 | 6 | 134 | 7.83e-51 | 171 |
MS.gene033113.t1 | AT3G17730 | 58.779 | 131 | 52 | 1 | 17 | 145 | 6 | 136 | 1.01e-50 | 169 |
MS.gene033113.t1 | AT3G15500 | 60.465 | 129 | 51 | 0 | 14 | 142 | 11 | 139 | 1.53e-50 | 171 |
MS.gene033113.t1 | AT4G27410 | 56.164 | 146 | 47 | 1 | 14 | 142 | 11 | 156 | 3.20e-50 | 170 |
MS.gene033113.t1 | AT1G52890 | 60.465 | 129 | 51 | 0 | 14 | 142 | 11 | 139 | 3.21e-50 | 170 |
MS.gene033113.t1 | AT5G08790 | 61.240 | 129 | 49 | 1 | 14 | 142 | 4 | 131 | 4.46e-50 | 169 |
MS.gene033113.t1 | AT1G65910 | 52.201 | 159 | 66 | 2 | 15 | 163 | 4 | 162 | 8.72e-50 | 176 |
MS.gene033113.t1 | AT1G32770 | 58.462 | 130 | 51 | 1 | 17 | 143 | 16 | 145 | 1.30e-49 | 170 |
MS.gene033113.t1 | AT3G03200 | 59.542 | 131 | 51 | 1 | 15 | 143 | 4 | 134 | 1.69e-49 | 172 |
MS.gene033113.t1 | AT1G77450 | 58.647 | 133 | 54 | 1 | 10 | 142 | 3 | 134 | 3.17e-49 | 166 |
MS.gene033113.t1 | AT3G10480 | 61.719 | 128 | 47 | 1 | 17 | 142 | 27 | 154 | 4.34e-49 | 171 |
MS.gene033113.t1 | AT3G10480 | 61.719 | 128 | 47 | 1 | 17 | 142 | 27 | 154 | 4.63e-49 | 171 |
MS.gene033113.t1 | AT3G10490 | 60.156 | 128 | 49 | 1 | 17 | 142 | 27 | 154 | 5.81e-49 | 164 |
MS.gene033113.t1 | AT5G17260 | 58.779 | 131 | 52 | 1 | 15 | 143 | 4 | 134 | 1.15e-48 | 170 |
MS.gene033113.t1 | AT5G63790 | 58.647 | 133 | 54 | 1 | 10 | 142 | 43 | 174 | 2.53e-48 | 165 |
MS.gene033113.t1 | AT5G63790 | 58.647 | 133 | 54 | 1 | 10 | 142 | 53 | 184 | 2.56e-48 | 166 |
MS.gene033113.t1 | AT1G54330 | 61.538 | 130 | 48 | 1 | 15 | 142 | 4 | 133 | 2.91e-48 | 165 |
MS.gene033113.t1 | AT1G79580 | 57.463 | 134 | 53 | 2 | 14 | 143 | 14 | 147 | 4.50e-48 | 166 |
MS.gene033113.t1 | AT1G79580 | 57.463 | 134 | 53 | 2 | 14 | 143 | 14 | 147 | 4.50e-48 | 166 |
MS.gene033113.t1 | AT1G79580 | 57.463 | 134 | 53 | 2 | 14 | 143 | 14 | 147 | 4.50e-48 | 166 |
MS.gene033113.t1 | AT1G79580 | 57.463 | 134 | 53 | 2 | 14 | 143 | 14 | 147 | 4.50e-48 | 166 |
MS.gene033113.t1 | AT1G79580 | 57.463 | 134 | 53 | 2 | 14 | 143 | 14 | 147 | 4.50e-48 | 166 |
MS.gene033113.t1 | AT2G33480 | 56.338 | 142 | 57 | 2 | 1 | 142 | 1 | 137 | 9.34e-48 | 162 |
MS.gene033113.t1 | AT2G33480 | 56.338 | 142 | 57 | 2 | 1 | 142 | 1 | 137 | 9.53e-48 | 162 |
MS.gene033113.t1 | AT3G10490 | 60.156 | 128 | 49 | 1 | 17 | 142 | 27 | 154 | 1.15e-47 | 167 |
MS.gene033113.t1 | AT3G15510 | 59.677 | 124 | 48 | 1 | 21 | 142 | 21 | 144 | 1.86e-47 | 164 |
MS.gene033113.t1 | AT4G28530 | 52.414 | 145 | 51 | 2 | 17 | 143 | 10 | 154 | 2.67e-47 | 164 |
MS.gene033113.t1 | AT1G26870 | 56.934 | 137 | 55 | 2 | 9 | 141 | 6 | 142 | 3.43e-47 | 165 |
MS.gene033113.t1 | AT5G39820 | 57.937 | 126 | 51 | 1 | 19 | 142 | 22 | 147 | 3.74e-47 | 163 |
MS.gene033113.t1 | AT5G13180 | 53.472 | 144 | 59 | 3 | 1 | 142 | 1 | 138 | 5.22e-47 | 160 |
MS.gene033113.t1 | AT4G17980 | 57.692 | 130 | 51 | 2 | 17 | 142 | 6 | 135 | 8.17e-47 | 160 |
MS.gene033113.t1 | AT4G17980 | 57.692 | 130 | 51 | 2 | 17 | 142 | 6 | 135 | 1.22e-46 | 160 |
MS.gene033113.t1 | AT2G43000 | 42.308 | 182 | 94 | 3 | 7 | 186 | 7 | 179 | 1.24e-46 | 160 |
MS.gene033113.t1 | AT3G49530 | 54.167 | 144 | 56 | 5 | 2 | 141 | 3 | 140 | 2.91e-45 | 160 |
MS.gene033113.t1 | AT5G24590 | 56.818 | 132 | 54 | 2 | 17 | 145 | 13 | 144 | 3.58e-45 | 160 |
MS.gene033113.t1 | AT2G27300 | 53.488 | 129 | 59 | 1 | 17 | 144 | 14 | 142 | 6.25e-45 | 157 |
MS.gene033113.t1 | AT3G49530 | 54.167 | 144 | 56 | 5 | 2 | 141 | 3 | 140 | 6.90e-45 | 160 |
MS.gene033113.t1 | AT2G02450 | 56.800 | 125 | 53 | 1 | 19 | 142 | 53 | 177 | 5.51e-44 | 155 |
MS.gene033113.t1 | AT2G02450 | 56.800 | 125 | 53 | 1 | 19 | 142 | 53 | 177 | 5.93e-44 | 156 |
MS.gene033113.t1 | AT5G64060 | 47.552 | 143 | 72 | 2 | 14 | 153 | 3 | 145 | 1.25e-43 | 154 |
MS.gene033113.t1 | AT5G09330 | 34.766 | 256 | 148 | 7 | 14 | 261 | 3 | 247 | 1.69e-43 | 157 |
MS.gene033113.t1 | AT5G09330 | 34.766 | 256 | 148 | 7 | 14 | 261 | 3 | 247 | 1.69e-43 | 157 |
MS.gene033113.t1 | AT5G09330 | 34.766 | 256 | 148 | 7 | 14 | 261 | 3 | 247 | 1.69e-43 | 157 |
MS.gene033113.t1 | AT5G09330 | 34.766 | 256 | 148 | 7 | 14 | 261 | 3 | 247 | 1.69e-43 | 157 |
MS.gene033113.t1 | AT5G09330 | 34.766 | 256 | 148 | 7 | 14 | 261 | 3 | 247 | 1.69e-43 | 157 |
MS.gene033113.t1 | AT1G34190 | 49.677 | 155 | 68 | 2 | 19 | 163 | 18 | 172 | 1.86e-43 | 158 |
MS.gene033113.t1 | AT1G34180 | 49.677 | 155 | 68 | 2 | 19 | 163 | 18 | 172 | 2.85e-43 | 155 |
MS.gene033113.t1 | AT3G10480 | 49.068 | 161 | 47 | 1 | 17 | 142 | 27 | 187 | 3.18e-43 | 157 |
MS.gene033113.t1 | AT1G52880 | 55.245 | 143 | 60 | 1 | 21 | 159 | 21 | 163 | 7.19e-43 | 151 |
MS.gene033113.t1 | AT1G34180 | 49.677 | 155 | 68 | 2 | 19 | 163 | 18 | 172 | 1.28e-42 | 155 |
MS.gene033113.t1 | AT2G17040 | 51.969 | 127 | 58 | 1 | 19 | 142 | 8 | 134 | 3.23e-42 | 148 |
MS.gene033113.t1 | AT5G22290 | 51.181 | 127 | 61 | 1 | 19 | 144 | 23 | 149 | 4.36e-42 | 150 |
MS.gene033113.t1 | AT1G34180 | 46.707 | 167 | 67 | 3 | 19 | 163 | 18 | 184 | 1.61e-41 | 151 |
MS.gene033113.t1 | AT1G32510 | 52.593 | 135 | 55 | 2 | 17 | 142 | 6 | 140 | 2.05e-41 | 146 |
MS.gene033113.t1 | AT1G34180 | 46.707 | 167 | 67 | 3 | 19 | 163 | 18 | 184 | 5.79e-41 | 151 |
MS.gene033113.t1 | AT3G44290 | 50.394 | 127 | 62 | 1 | 19 | 144 | 16 | 142 | 5.69e-40 | 141 |
MS.gene033113.t1 | AT3G12910 | 51.095 | 137 | 61 | 3 | 11 | 142 | 15 | 150 | 1.91e-39 | 142 |
MS.gene033113.t1 | AT3G44290 | 50.394 | 127 | 62 | 1 | 19 | 144 | 16 | 142 | 2.30e-39 | 142 |
MS.gene033113.t1 | AT1G32870 | 49.693 | 163 | 68 | 3 | 13 | 163 | 6 | 166 | 7.47e-39 | 145 |
MS.gene033113.t1 | AT1G32870 | 49.693 | 163 | 68 | 3 | 13 | 163 | 6 | 166 | 8.12e-39 | 145 |
MS.gene033113.t1 | AT1G32870 | 50.314 | 159 | 65 | 3 | 17 | 163 | 46 | 202 | 1.92e-38 | 144 |
MS.gene033113.t1 | AT1G56010 | 37.662 | 231 | 114 | 8 | 66 | 281 | 2 | 217 | 3.02e-38 | 137 |
MS.gene033113.t1 | AT5G04395 | 48.592 | 142 | 57 | 2 | 17 | 142 | 28 | 169 | 2.41e-37 | 133 |
MS.gene033113.t1 | AT3G12977 | 42.857 | 168 | 76 | 4 | 66 | 223 | 14 | 171 | 2.81e-36 | 131 |
MS.gene033113.t1 | AT4G10350 | 63.529 | 85 | 28 | 1 | 62 | 143 | 7 | 91 | 2.38e-31 | 120 |
MS.gene033113.t1 | AT4G28530 | 46.875 | 128 | 50 | 2 | 17 | 126 | 10 | 137 | 2.76e-31 | 120 |
MS.gene033113.t1 | AT2G33480 | 65.753 | 73 | 25 | 0 | 70 | 142 | 8 | 80 | 3.10e-27 | 107 |
MS.gene033113.t1 | AT3G04420 | 41.538 | 130 | 72 | 2 | 15 | 140 | 1 | 130 | 9.23e-27 | 107 |
MS.gene033113.t1 | AT1G02230 | 39.873 | 158 | 84 | 6 | 18 | 167 | 4 | 158 | 9.56e-27 | 109 |
MS.gene033113.t1 | AT3G04420 | 41.538 | 130 | 72 | 2 | 15 | 140 | 1 | 130 | 1.83e-26 | 108 |
MS.gene033113.t1 | AT4G01550 | 41.860 | 129 | 69 | 3 | 20 | 142 | 7 | 135 | 3.81e-26 | 108 |
MS.gene033113.t1 | AT5G64530 | 40.769 | 130 | 63 | 3 | 15 | 142 | 1 | 118 | 1.78e-25 | 100 |
MS.gene033113.t1 | AT5G64530 | 40.769 | 130 | 63 | 3 | 15 | 142 | 1 | 118 | 4.97e-25 | 100 |
MS.gene033113.t1 | AT3G44350 | 38.776 | 147 | 80 | 4 | 16 | 154 | 4 | 148 | 1.73e-24 | 98.2 |
MS.gene033113.t1 | AT3G44350 | 39.041 | 146 | 79 | 4 | 16 | 153 | 4 | 147 | 1.91e-24 | 100 |
MS.gene033113.t1 | AT5G22380 | 37.162 | 148 | 85 | 4 | 20 | 159 | 8 | 155 | 2.98e-24 | 99.8 |
MS.gene033113.t1 | AT4G01520 | 37.778 | 135 | 77 | 4 | 15 | 142 | 2 | 136 | 1.41e-23 | 99.4 |
MS.gene033113.t1 | AT1G02220 | 40.000 | 130 | 71 | 3 | 15 | 140 | 1 | 127 | 1.54e-23 | 100 |
MS.gene033113.t1 | AT4G01540 | 38.462 | 130 | 73 | 4 | 20 | 142 | 7 | 136 | 4.78e-23 | 99.8 |
MS.gene033113.t1 | AT4G01540 | 38.462 | 130 | 73 | 4 | 20 | 142 | 7 | 136 | 6.48e-23 | 99.0 |
MS.gene033113.t1 | AT4G01540 | 38.462 | 130 | 73 | 4 | 20 | 142 | 7 | 136 | 7.30e-23 | 99.0 |
MS.gene033113.t1 | AT4G01540 | 38.462 | 130 | 73 | 4 | 20 | 142 | 7 | 136 | 7.36e-23 | 99.8 |
MS.gene033113.t1 | AT1G02250 | 40.602 | 133 | 69 | 4 | 15 | 140 | 1 | 130 | 1.05e-22 | 97.8 |
MS.gene033113.t1 | AT5G14000 | 38.571 | 140 | 80 | 3 | 15 | 150 | 13 | 150 | 2.47e-20 | 87.0 |
MS.gene033113.t1 | AT1G01010 | 39.568 | 139 | 64 | 6 | 20 | 143 | 6 | 139 | 2.75e-20 | 91.7 |
MS.gene033113.t1 | AT5G14000 | 34.591 | 159 | 90 | 4 | 15 | 163 | 13 | 167 | 1.22e-19 | 86.3 |
MS.gene033113.t1 | AT3G10490 | 71.698 | 53 | 15 | 0 | 90 | 142 | 2 | 54 | 2.52e-19 | 88.2 |
MS.gene033113.t1 | AT3G10490 | 71.698 | 53 | 15 | 0 | 90 | 142 | 2 | 54 | 2.52e-19 | 88.2 |
MS.gene033113.t1 | AT2G18060 | 69.388 | 49 | 15 | 0 | 95 | 143 | 2 | 50 | 7.49e-19 | 85.9 |
MS.gene033113.t1 | AT2G43000 | 37.273 | 110 | 59 | 2 | 78 | 186 | 1 | 101 | 1.73e-18 | 82.8 |
MS.gene033113.t1 | AT5G50820 | 35.971 | 139 | 63 | 6 | 15 | 142 | 15 | 138 | 4.43e-16 | 76.3 |
MS.gene033113.t1 | AT3G56530 | 33.846 | 130 | 83 | 2 | 17 | 143 | 52 | 181 | 1.34e-15 | 77.0 |
MS.gene033113.t1 | AT5G22290 | 57.143 | 49 | 21 | 0 | 96 | 144 | 2 | 50 | 1.98e-15 | 75.5 |
MS.gene033113.t1 | AT3G55210 | 36.000 | 150 | 76 | 7 | 17 | 150 | 11 | 156 | 5.25e-14 | 72.0 |
MS.gene033113.t1 | AT5G14490 | 34.266 | 143 | 76 | 4 | 17 | 142 | 58 | 199 | 1.66e-13 | 71.2 |
MS.gene033113.t1 | AT5G14490 | 34.266 | 143 | 76 | 4 | 17 | 142 | 55 | 196 | 1.86e-13 | 70.9 |
MS.gene033113.t1 | AT5G14490 | 34.266 | 143 | 76 | 4 | 17 | 142 | 58 | 199 | 2.53e-13 | 70.9 |
MS.gene033113.t1 | AT5G14490 | 34.266 | 143 | 76 | 4 | 17 | 142 | 55 | 196 | 2.85e-13 | 69.7 |
MS.gene033113.t1 | AT4G29230 | 31.056 | 161 | 84 | 5 | 7 | 142 | 38 | 196 | 1.73e-12 | 68.6 |
MS.gene033113.t1 | AT4G29230 | 31.056 | 161 | 84 | 5 | 7 | 142 | 38 | 196 | 2.13e-12 | 68.2 |
MS.gene033113.t1 | AT3G04430 | 31.061 | 132 | 77 | 4 | 23 | 141 | 6 | 136 | 2.74e-12 | 65.5 |
MS.gene033113.t1 | AT4G28500 | 34.028 | 144 | 75 | 5 | 17 | 142 | 59 | 200 | 3.63e-12 | 66.6 |
MS.gene033113.t1 | AT4G29230 | 31.788 | 151 | 76 | 5 | 17 | 142 | 47 | 195 | 4.42e-12 | 67.4 |
Find 59 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATTCAACAACTCAATTTA+TGG | 0.161606 | 8.2:-17204813 | MS.gene033113:CDS |
AAGAATACCTTTGCAGCTTT+TGG | 0.230826 | 8.2:+17205173 | None:intergenic |
GATTCACTTGGTAATGAATT+TGG | 0.258463 | 8.2:-17204969 | MS.gene033113:CDS |
CGTTTCAGTCTTATCAAATA+AGG | 0.280400 | 8.2:-17205745 | MS.gene033113:CDS |
GATATTGGTAGAAGGACTTT+TGG | 0.286579 | 8.2:-17204528 | MS.gene033113:CDS |
AAGTCATTACCTTTACAAAA+AGG | 0.312749 | 8.2:-17205661 | MS.gene033113:CDS |
CCATTAGAAGATGAACTTCT+TGG | 0.324565 | 8.2:+17204756 | None:intergenic |
CAATATCCTAGTTCTGTTTG+TGG | 0.332743 | 8.2:-17204696 | MS.gene033113:CDS |
CCAAGAAGTTCATCTTCTAA+TGG | 0.365852 | 8.2:-17204756 | MS.gene033113:CDS |
GAGAAGATGGATTTGCCTCC+TGG | 0.385429 | 8.2:-17205717 | MS.gene033113:CDS |
AATCAAACAATTGAATGATT+CGG | 0.401710 | 8.2:-17204898 | MS.gene033113:CDS |
GCAGGGTATTGGAAAGCAAC+TGG | 0.414845 | 8.2:-17205344 | MS.gene033113:CDS |
AGAGACAGAAAATATCCAAC+TGG | 0.424929 | 8.2:-17205392 | MS.gene033113:CDS |
GAGCAACAGAAGCAGGGTAT+TGG | 0.425676 | 8.2:-17205355 | MS.gene033113:CDS |
ACAAACAGAGCAACAGAAGC+AGG | 0.435579 | 8.2:-17205362 | MS.gene033113:CDS |
TATTTCTGGTATAATGAGGT+TGG | 0.436493 | 8.2:-17204991 | MS.gene033113:CDS |
CATTAGAAGATGAACTTCTT+GGG | 0.443626 | 8.2:+17204757 | None:intergenic |
ATCAATTGAGTTGGAGAAGC+AGG | 0.451718 | 8.2:+17204866 | None:intergenic |
CTGATTCGTCGAATTCGATT+GGG | 0.452226 | 8.2:-17204923 | MS.gene033113:CDS |
CCTCAACAAGTCTGAACCTT+GGG | 0.462640 | 8.2:-17205595 | MS.gene033113:CDS |
AATTTCTCTGCAAGAGCCAT+TGG | 0.466190 | 8.2:-17205627 | MS.gene033113:CDS |
CTGTTTGTCCTCAACCCAGT+TGG | 0.474621 | 8.2:+17205377 | None:intergenic |
ACTGATTCGTCGAATTCGAT+TGG | 0.482670 | 8.2:-17204924 | MS.gene033113:CDS |
CACATATTTCTGGTATAATG+AGG | 0.489545 | 8.2:-17204995 | MS.gene033113:CDS |
CTTATAAGCTCTTCATCAGT+CGG | 0.490590 | 8.2:+17205681 | None:intergenic |
GATGAGTGTATCACAGGAAA+CGG | 0.491856 | 8.2:-17204601 | MS.gene033113:CDS |
AAATAAGGAAGATGAGAAGA+TGG | 0.493958 | 8.2:-17205730 | MS.gene033113:CDS |
GTCGGGTGAAATCGAAATCC+AGG | 0.501638 | 8.2:+17205699 | None:intergenic |
TCAACAGCTGCAACAGAAGC+AGG | 0.510943 | 8.2:+17204483 | None:intergenic |
TCTTTGAACATCAATTGAGT+TGG | 0.511446 | 8.2:+17204857 | None:intergenic |
GAAAATATCCAACTGGGTTG+AGG | 0.516250 | 8.2:-17205385 | MS.gene033113:CDS |
ATGCATGAATATCGACTTGA+GGG | 0.521465 | 8.2:-17205218 | MS.gene033113:CDS |
TACTTACATGGTAAATCCCA+AGG | 0.522817 | 8.2:+17205579 | None:intergenic |
ATGAATCAAAGATCCCTCCT+TGG | 0.526043 | 8.2:+17204832 | None:intergenic |
CCCAAGGTTCAGACTTGTTG+AGG | 0.528521 | 8.2:+17205595 | None:intergenic |
TTCAAAGGGAAATCGTTGGT+TGG | 0.533657 | 8.2:-17205305 | MS.gene033113:CDS |
TTCAACAACTCAATTTATGG+TGG | 0.537634 | 8.2:-17204810 | MS.gene033113:CDS |
TTATAAGCTCTTCATCAGTC+GGG | 0.551669 | 8.2:+17205682 | None:intergenic |
TACAAAGGAAGAGCACCTAA+AGG | 0.552423 | 8.2:-17205260 | MS.gene033113:CDS |
ACAAATGATGAGTGTATCAC+AGG | 0.560386 | 8.2:-17204607 | MS.gene033113:CDS |
TAATCTTCCAAAAGCTGCAA+AGG | 0.563656 | 8.2:-17205180 | MS.gene033113:intron |
TGCATACCACAAACAGAACT+AGG | 0.564682 | 8.2:+17204690 | None:intergenic |
GCTGCAACAGAAGCAGGTGG+TGG | 0.576822 | 8.2:+17204489 | None:intergenic |
ACCTCAACAAGTCTGAACCT+TGG | 0.581627 | 8.2:-17205596 | MS.gene033113:CDS |
CAGGGTATTGGAAAGCAACT+GGG | 0.599644 | 8.2:-17205343 | MS.gene033113:CDS |
TATGCATGAATATCGACTTG+AGG | 0.612535 | 8.2:-17205219 | MS.gene033113:CDS |
ATTGATGTTCAAAGAAACCA+AGG | 0.616657 | 8.2:-17204849 | MS.gene033113:CDS |
GAATTCGACGAATCAGTAAG+TGG | 0.627084 | 8.2:+17204930 | None:intergenic |
GTTGAGGTCTACATCACCAA+TGG | 0.634909 | 8.2:+17205611 | None:intergenic |
AGAGCTTTGTATGAAAACAA+CGG | 0.644899 | 8.2:-17204651 | MS.gene033113:CDS |
ATAATGAGGTTGGATTCACT+TGG | 0.646475 | 8.2:-17204981 | MS.gene033113:CDS |
CAAACAGAGCAACAGAAGCA+GGG | 0.648037 | 8.2:-17205361 | MS.gene033113:CDS |
GAGACAGAAAATATCCAACT+GGG | 0.662566 | 8.2:-17205391 | MS.gene033113:CDS |
ATACTCTAATAATCAAGCTG+CGG | 0.664743 | 8.2:-17204727 | MS.gene033113:CDS |
ATGTTCAAAGAAACCAAGGA+GGG | 0.670364 | 8.2:-17204845 | MS.gene033113:CDS |
TTCGACGAATCAGTAAGTGG+TGG | 0.693712 | 8.2:+17204933 | None:intergenic |
ACAGCTGCAACAGAAGCAGG+TGG | 0.707691 | 8.2:+17204486 | None:intergenic |
GATGTTCAAAGAAACCAAGG+AGG | 0.712058 | 8.2:-17204846 | MS.gene033113:CDS |
GGGTGAAATCGAAATCCAGG+AGG | 0.758130 | 8.2:+17205702 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTGTTTTGAAATTTT+GGG | - | chr8.2:17204743-17204762 | MS.gene033113:CDS | 10.0% |
!!! | TTTTTTTTGTTTTGAAATTT+TGG | - | chr8.2:17204742-17204761 | MS.gene033113:CDS | 10.0% |
!!! | AAAGATAAAGAAATTTTCAA+AGG | - | chr8.2:17204888-17204907 | MS.gene033113:CDS | 15.0% |
!!! | AAGATAAAGAAATTTTCAAA+GGG | - | chr8.2:17204889-17204908 | MS.gene033113:CDS | 15.0% |
!! | AAGATTCATATCAAATTCAA+AGG | + | chr8.2:17204704-17204723 | None:intergenic | 20.0% |
!! | AATCAAACAATTGAATGATT+CGG | - | chr8.2:17205310-17205329 | MS.gene033113:CDS | 20.0% |
!! | AATCCAAATTCAAATTCAAA+AGG | + | chr8.2:17205119-17205138 | None:intergenic | 20.0% |
!! | TAAAGGAGAAAAAAGTAATT+GGG | - | chr8.2:17204965-17204984 | MS.gene033113:CDS | 20.0% |
!! | TTTGAATTTGAATTTGGATT+TGG | - | chr8.2:17205119-17205138 | MS.gene033113:intron | 20.0% |
!!! | AATCAATAACCTTTTTGTAA+AGG | + | chr8.2:17204559-17204578 | None:intergenic | 20.0% |
!!! | ATTCAAAAGGCATAAAAAAA+TGG | + | chr8.2:17205106-17205125 | None:intergenic | 20.0% |
!!! | GTTTTAGTTAAAGCAAAAAT+GGG | - | chr8.2:17204765-17204784 | MS.gene033113:CDS | 20.0% |
! | AAAAAGGTGAAAACAAAAAG+TGG | + | chr8.2:17204676-17204695 | None:intergenic | 25.0% |
! | AAAAGGTGAAAACAAAAAGT+GGG | + | chr8.2:17204675-17204694 | None:intergenic | 25.0% |
! | AAATTCAAAGGTGGTAAAAA+AGG | + | chr8.2:17204692-17204711 | None:intergenic | 25.0% |
! | AAGTCATTACCTTTACAAAA+AGG | - | chr8.2:17204547-17204566 | MS.gene033113:CDS | 25.0% |
! | ATTCATATCAAATTCAAAGG+TGG | + | chr8.2:17204701-17204720 | None:intergenic | 25.0% |
! | CTAAAGGAGAAAAAAGTAAT+TGG | - | chr8.2:17204964-17204983 | MS.gene033113:CDS | 25.0% |
! | TCATTCAACAACTCAATTTA+TGG | - | chr8.2:17205395-17205414 | MS.gene033113:CDS | 25.0% |
!! | ATGCCTTTTGAATTTGAATT+TGG | - | chr8.2:17205113-17205132 | MS.gene033113:intron | 25.0% |
!!! | AAAACTCTTGTTTTCTACAA+AGG | - | chr8.2:17204933-17204952 | MS.gene033113:CDS | 25.0% |
!!! | CAAATTTTGATATTGGTAGA+AGG | - | chr8.2:17205672-17205691 | MS.gene033113:CDS | 25.0% |
!!! | CAATTACTTTTTTCTCCTTT+AGG | + | chr8.2:17204966-17204985 | None:intergenic | 25.0% |
!!! | GGTTTTAGTTAAAGCAAAAA+TGG | - | chr8.2:17204764-17204783 | MS.gene033113:CDS | 25.0% |
!!! | GTTGTGTCAAATTTTGATAT+TGG | - | chr8.2:17205665-17205684 | MS.gene033113:CDS | 25.0% |
!!! | TTTGATTGGTTTTACTTACA+TGG | + | chr8.2:17204644-17204663 | None:intergenic | 25.0% |
AAATAAGGAAGATGAGAAGA+TGG | - | chr8.2:17204478-17204497 | MS.gene033113:CDS | 30.0% | |
ATACTCTAATAATCAAGCTG+CGG | - | chr8.2:17205481-17205500 | MS.gene033113:intron | 30.0% | |
ATTGATGTTCAAAGAAACCA+AGG | - | chr8.2:17205359-17205378 | MS.gene033113:CDS | 30.0% | |
CAAAAATGGGAGAAAAAGAA+TGG | - | chr8.2:17204778-17204797 | MS.gene033113:CDS | 30.0% | |
CATTAGAAGATGAACTTCTT+GGG | + | chr8.2:17205454-17205473 | None:intergenic | 30.0% | |
GGGAAAAAAACACATATTTC+TGG | - | chr8.2:17205203-17205222 | MS.gene033113:CDS | 30.0% | |
TCTTTGAACATCAATTGAGT+TGG | + | chr8.2:17205354-17205373 | None:intergenic | 30.0% | |
TTCAACAACTCAATTTATGG+TGG | - | chr8.2:17205398-17205417 | MS.gene033113:CDS | 30.0% | |
! | AATTTTCAAAGGGAAATCGT+TGG | - | chr8.2:17204899-17204918 | MS.gene033113:CDS | 30.0% |
! | AGAGCTTTGTATGAAAACAA+CGG | - | chr8.2:17205557-17205576 | MS.gene033113:intron | 30.0% |
! | ATATTGGTAGAAGGACTTTT+GGG | - | chr8.2:17205681-17205700 | MS.gene033113:CDS | 30.0% |
! | ATTGTGTTTTGCAGAATGAA+TGG | - | chr8.2:17205147-17205166 | MS.gene033113:intron | 30.0% |
! | CGTTTCAGTCTTATCAAATA+AGG | - | chr8.2:17204463-17204482 | MS.gene033113:CDS | 30.0% |
! | TTGATTTTCATGGTACTTTG+TGG | - | chr8.2:17205744-17205763 | MS.gene033113:CDS | 30.0% |
! | TTGTGTTTTGCAGAATGAAT+GGG | - | chr8.2:17205148-17205167 | MS.gene033113:intron | 30.0% |
!! | CACATATTTCTGGTATAATG+AGG | - | chr8.2:17205213-17205232 | MS.gene033113:CDS | 30.0% |
!! | GATTCACTTGGTAATGAATT+TGG | - | chr8.2:17205239-17205258 | MS.gene033113:CDS | 30.0% |
!! | TATTTCTGGTATAATGAGGT+TGG | - | chr8.2:17205217-17205236 | MS.gene033113:CDS | 30.0% |
ACAAATGATGAGTGTATCAC+AGG | - | chr8.2:17205601-17205620 | MS.gene033113:CDS | 35.0% | |
AGAGACAGAAAATATCCAAC+TGG | - | chr8.2:17204816-17204835 | MS.gene033113:CDS | 35.0% | |
AGTGGGTCTGAAAATTTGAT+TGG | + | chr8.2:17204658-17204677 | None:intergenic | 35.0% | |
ATAATGAGGTTGGATTCACT+TGG | - | chr8.2:17205227-17205246 | MS.gene033113:CDS | 35.0% | |
ATGTTCAAAGAAACCAAGGA+GGG | - | chr8.2:17205363-17205382 | MS.gene033113:CDS | 35.0% | |
CCAAGAAGTTCATCTTCTAA+TGG | - | chr8.2:17205452-17205471 | MS.gene033113:intron | 35.0% | |
CCATTAGAAGATGAACTTCT+TGG | + | chr8.2:17205455-17205474 | None:intergenic | 35.0% | |
CTTATAAGCTCTTCATCAGT+CGG | + | chr8.2:17204530-17204549 | None:intergenic | 35.0% | |
GAGACAGAAAATATCCAACT+GGG | - | chr8.2:17204817-17204836 | MS.gene033113:CDS | 35.0% | |
TAATCTTCCAAAAGCTGCAA+AGG | - | chr8.2:17205028-17205047 | MS.gene033113:intron | 35.0% | |
TACTTACATGGTAAATCCCA+AGG | + | chr8.2:17204632-17204651 | None:intergenic | 35.0% | |
TTATAAGCTCTTCATCAGTC+GGG | + | chr8.2:17204529-17204548 | None:intergenic | 35.0% | |
! | AAGAATACCTTTGCAGCTTT+TGG | + | chr8.2:17205038-17205057 | None:intergenic | 35.0% |
! | AGAATGAATGGGTGATTTGT+AGG | - | chr8.2:17205159-17205178 | MS.gene033113:intron | 35.0% |
! | GAATGAATGGGTGATTTGTA+GGG | - | chr8.2:17205160-17205179 | MS.gene033113:intron | 35.0% |
! | GATATTGGTAGAAGGACTTT+TGG | - | chr8.2:17205680-17205699 | MS.gene033113:CDS | 35.0% |
!! | ATGCATGAATATCGACTTGA+GGG | - | chr8.2:17204990-17205009 | MS.gene033113:CDS | 35.0% |
!! | CAATATCCTAGTTCTGTTTG+TGG | - | chr8.2:17205512-17205531 | MS.gene033113:intron | 35.0% |
!! | TATGCATGAATATCGACTTG+AGG | - | chr8.2:17204989-17205008 | MS.gene033113:CDS | 35.0% |
!! | TTTTTCAGAAGAGTTCAGCT+GGG | - | chr8.2:17205183-17205202 | MS.gene033113:CDS | 35.0% |
AATTTCTCTGCAAGAGCCAT+TGG | - | chr8.2:17204581-17204600 | MS.gene033113:CDS | 40.0% | |
ATGAATCAAAGATCCCTCCT+TGG | + | chr8.2:17205379-17205398 | None:intergenic | 40.0% | |
GAAAATATCCAACTGGGTTG+AGG | - | chr8.2:17204823-17204842 | MS.gene033113:CDS | 40.0% | |
GAATTCGACGAATCAGTAAG+TGG | + | chr8.2:17205281-17205300 | None:intergenic | 40.0% | |
GATGAGTGTATCACAGGAAA+CGG | - | chr8.2:17205607-17205626 | MS.gene033113:CDS | 40.0% | |
GATGTTCAAAGAAACCAAGG+AGG | - | chr8.2:17205362-17205381 | MS.gene033113:CDS | 40.0% | |
TGCATACCACAAACAGAACT+AGG | + | chr8.2:17205521-17205540 | None:intergenic | 40.0% | |
TTCAAAGGGAAATCGTTGGT+TGG | - | chr8.2:17204903-17204922 | MS.gene033113:CDS | 40.0% | |
! | CTGATTCGTCGAATTCGATT+GGG | - | chr8.2:17205285-17205304 | MS.gene033113:CDS | 40.0% |
!! | ACTGATTCGTCGAATTCGAT+TGG | - | chr8.2:17205284-17205303 | MS.gene033113:CDS | 40.0% |
!! | ATCAATTGAGTTGGAGAAGC+AGG | + | chr8.2:17205345-17205364 | None:intergenic | 40.0% |
!! | GTTTTTCAGAAGAGTTCAGC+TGG | - | chr8.2:17205182-17205201 | MS.gene033113:CDS | 40.0% |
!! | TACAAAGGAAGAGCACCTAA+AGG | - | chr8.2:17204948-17204967 | MS.gene033113:CDS | 40.0% |
!!! | GTTGCAGCTGTTGATTTTCA+TGG | - | chr8.2:17205734-17205753 | MS.gene033113:CDS | 40.0% |
ACAAACAGAGCAACAGAAGC+AGG | - | chr8.2:17204846-17204865 | MS.gene033113:CDS | 45.0% | |
ACCTCAACAAGTCTGAACCT+TGG | - | chr8.2:17204612-17204631 | MS.gene033113:CDS | 45.0% | |
CAAACAGAGCAACAGAAGCA+GGG | - | chr8.2:17204847-17204866 | MS.gene033113:CDS | 45.0% | |
CCTCAACAAGTCTGAACCTT+GGG | - | chr8.2:17204613-17204632 | MS.gene033113:CDS | 45.0% | |
GTTGAGGTCTACATCACCAA+TGG | + | chr8.2:17204600-17204619 | None:intergenic | 45.0% | |
TTCGACGAATCAGTAAGTGG+TGG | + | chr8.2:17205278-17205297 | None:intergenic | 45.0% | |
!! | CAGGGTATTGGAAAGCAACT+GGG | - | chr8.2:17204865-17204884 | MS.gene033113:CDS | 45.0% |
CTGTTTGTCCTCAACCCAGT+TGG | + | chr8.2:17204834-17204853 | None:intergenic | 50.0% | |
GAGCAACAGAAGCAGGGTAT+TGG | - | chr8.2:17204853-17204872 | MS.gene033113:CDS | 50.0% | |
GGGTGAAATCGAAATCCAGG+AGG | + | chr8.2:17204509-17204528 | None:intergenic | 50.0% | |
GTCGGGTGAAATCGAAATCC+AGG | + | chr8.2:17204512-17204531 | None:intergenic | 50.0% | |
TCAACAGCTGCAACAGAAGC+AGG | + | chr8.2:17205728-17205747 | None:intergenic | 50.0% | |
! | GAGAAGATGGATTTGCCTCC+TGG | - | chr8.2:17204491-17204510 | MS.gene033113:CDS | 50.0% |
!! | CCCAAGGTTCAGACTTGTTG+AGG | + | chr8.2:17204616-17204635 | None:intergenic | 50.0% |
!! | GCAGGGTATTGGAAAGCAAC+TGG | - | chr8.2:17204864-17204883 | MS.gene033113:CDS | 50.0% |
ACAGCTGCAACAGAAGCAGG+TGG | + | chr8.2:17205725-17205744 | None:intergenic | 55.0% | |
GCTGCAACAGAAGCAGGTGG+TGG | + | chr8.2:17205722-17205741 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 17204455 | 17205775 | 17204455 | ID=MS.gene033113 |
chr8.2 | mRNA | 17204455 | 17205775 | 17204455 | ID=MS.gene033113.t1;Parent=MS.gene033113 |
chr8.2 | exon | 17205586 | 17205775 | 17205586 | ID=MS.gene033113.t1.exon1;Parent=MS.gene033113.t1 |
chr8.2 | CDS | 17205586 | 17205775 | 17205586 | ID=cds.MS.gene033113.t1;Parent=MS.gene033113.t1 |
chr8.2 | exon | 17205181 | 17205458 | 17205181 | ID=MS.gene033113.t1.exon2;Parent=MS.gene033113.t1 |
chr8.2 | CDS | 17205181 | 17205458 | 17205181 | ID=cds.MS.gene033113.t1;Parent=MS.gene033113.t1 |
chr8.2 | exon | 17204455 | 17205039 | 17204455 | ID=MS.gene033113.t1.exon3;Parent=MS.gene033113.t1 |
chr8.2 | CDS | 17204455 | 17205039 | 17204455 | ID=cds.MS.gene033113.t1;Parent=MS.gene033113.t1 |
Gene Sequence |
Protein sequence |