Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044393.t1 | XP_013457910.1 | 98.1 | 360 | 6 | 1 | 1 | 360 | 1 | 359 | 5.80E-204 | 719.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044393.t1 | Q9FLJ2 | 59.8 | 351 | 118 | 9 | 10 | 360 | 9 | 336 | 7.6e-112 | 405.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044393.t1 | A0A072URG4 | 98.1 | 360 | 6 | 1 | 1 | 360 | 1 | 359 | 4.2e-204 | 719.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene044393.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene044393 | MS.gene061729 | PPI |
MS.gene044393 | MS.gene58420 | PPI |
MS.gene044393 | MS.gene033113 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044393.t1 | MTR_4g108760 | 98.056 | 360 | 6 | 1 | 1 | 360 | 1 | 359 | 0.0 | 736 |
MS.gene044393.t1 | MTR_3g435150 | 68.750 | 320 | 81 | 7 | 1 | 319 | 1 | 302 | 1.69e-144 | 411 |
MS.gene044393.t1 | MTR_6g012670 | 62.295 | 244 | 81 | 4 | 12 | 248 | 15 | 254 | 3.44e-104 | 309 |
MS.gene044393.t1 | MTR_7g085260 | 46.819 | 393 | 166 | 14 | 1 | 360 | 1 | 383 | 2.32e-98 | 296 |
MS.gene044393.t1 | MTR_6g032770 | 49.858 | 353 | 151 | 11 | 2 | 333 | 3 | 350 | 3.34e-98 | 296 |
MS.gene044393.t1 | MTR_6g084430 | 67.337 | 199 | 52 | 4 | 16 | 205 | 4 | 198 | 1.16e-89 | 272 |
MS.gene044393.t1 | MTR_2g078700 | 79.618 | 157 | 30 | 1 | 17 | 171 | 23 | 179 | 7.51e-89 | 272 |
MS.gene044393.t1 | MTR_3g070030 | 47.181 | 337 | 157 | 7 | 11 | 340 | 13 | 335 | 3.42e-88 | 270 |
MS.gene044393.t1 | MTR_7g011130 | 51.661 | 271 | 109 | 4 | 11 | 259 | 13 | 283 | 7.72e-82 | 253 |
MS.gene044393.t1 | MTR_7g011120 | 52.416 | 269 | 101 | 6 | 11 | 258 | 2 | 264 | 1.20e-80 | 249 |
MS.gene044393.t1 | MTR_3g109340 | 64.943 | 174 | 55 | 2 | 2 | 173 | 7 | 176 | 1.50e-78 | 245 |
MS.gene044393.t1 | MTR_3g109340 | 64.368 | 174 | 57 | 2 | 2 | 173 | 7 | 177 | 1.38e-77 | 243 |
MS.gene044393.t1 | MTR_1g008740 | 68.452 | 168 | 46 | 4 | 9 | 173 | 6 | 169 | 2.68e-77 | 241 |
MS.gene044393.t1 | MTR_1g008740 | 65.714 | 175 | 53 | 4 | 2 | 173 | 13 | 183 | 3.37e-77 | 242 |
MS.gene044393.t1 | MTR_3g070040 | 42.737 | 358 | 173 | 12 | 11 | 360 | 2 | 335 | 6.45e-73 | 230 |
MS.gene044393.t1 | MTR_2g064470 | 46.816 | 267 | 113 | 9 | 1 | 264 | 1 | 241 | 1.53e-67 | 215 |
MS.gene044393.t1 | MTR_3g116070 | 63.125 | 160 | 54 | 4 | 2 | 156 | 7 | 166 | 4.63e-62 | 202 |
MS.gene044393.t1 | MTR_1g069805 | 48.691 | 191 | 82 | 4 | 17 | 205 | 10 | 186 | 4.20e-59 | 192 |
MS.gene044393.t1 | MTR_4g101680 | 60.000 | 155 | 53 | 3 | 17 | 167 | 7 | 156 | 9.28e-59 | 194 |
MS.gene044393.t1 | MTR_4g036030 | 57.792 | 154 | 58 | 3 | 17 | 167 | 7 | 156 | 1.11e-58 | 193 |
MS.gene044393.t1 | MTR_8g059170 | 55.625 | 160 | 71 | 0 | 14 | 173 | 11 | 170 | 1.19e-58 | 193 |
MS.gene044393.t1 | MTR_5g041940 | 54.375 | 160 | 71 | 1 | 15 | 172 | 1 | 160 | 3.52e-58 | 189 |
MS.gene044393.t1 | MTR_5g021710 | 52.047 | 171 | 75 | 3 | 17 | 184 | 8 | 174 | 3.73e-58 | 192 |
MS.gene044393.t1 | MTR_2g080010 | 40.449 | 267 | 128 | 9 | 13 | 259 | 11 | 266 | 4.92e-58 | 192 |
MS.gene044393.t1 | MTR_4g035590 | 57.143 | 168 | 58 | 3 | 17 | 175 | 8 | 170 | 5.14e-58 | 192 |
MS.gene044393.t1 | MTR_5g012080 | 56.962 | 158 | 61 | 3 | 17 | 170 | 7 | 161 | 7.68e-58 | 191 |
MS.gene044393.t1 | MTR_4g081870 | 46.465 | 198 | 95 | 3 | 16 | 211 | 8 | 196 | 9.88e-58 | 189 |
MS.gene044393.t1 | MTR_8g076110 | 53.503 | 157 | 66 | 3 | 17 | 170 | 6 | 158 | 1.10e-57 | 190 |
MS.gene044393.t1 | MTR_2g079990 | 53.293 | 167 | 76 | 1 | 14 | 180 | 13 | 177 | 1.85e-57 | 191 |
MS.gene044393.t1 | MTR_2157s0010 | 51.667 | 180 | 73 | 4 | 17 | 182 | 8 | 187 | 6.02e-57 | 186 |
MS.gene044393.t1 | MTR_7g085220 | 52.663 | 169 | 69 | 3 | 14 | 171 | 5 | 173 | 7.26e-57 | 189 |
MS.gene044393.t1 | MTR_8g024480 | 48.969 | 194 | 76 | 5 | 2 | 175 | 3 | 193 | 9.74e-57 | 191 |
MS.gene044393.t1 | MTR_7g100990 | 57.595 | 158 | 63 | 3 | 14 | 167 | 8 | 165 | 1.17e-56 | 187 |
MS.gene044393.t1 | MTR_2g064090 | 55.000 | 160 | 61 | 3 | 15 | 168 | 4 | 158 | 2.13e-56 | 187 |
MS.gene044393.t1 | MTR_3g088110 | 54.037 | 161 | 72 | 2 | 14 | 173 | 4 | 163 | 5.91e-56 | 184 |
MS.gene044393.t1 | MTR_2g062730 | 52.761 | 163 | 69 | 3 | 14 | 172 | 7 | 165 | 1.02e-55 | 186 |
MS.gene044393.t1 | MTR_7g097090 | 55.263 | 152 | 60 | 3 | 17 | 166 | 10 | 155 | 1.25e-55 | 184 |
MS.gene044393.t1 | MTR_1g096430 | 52.500 | 160 | 69 | 3 | 17 | 173 | 7 | 162 | 6.17e-55 | 184 |
MS.gene044393.t1 | MTR_4g089135 | 49.153 | 177 | 67 | 3 | 17 | 170 | 15 | 191 | 3.86e-54 | 182 |
MS.gene044393.t1 | MTR_8g094580 | 53.659 | 164 | 67 | 3 | 15 | 173 | 5 | 164 | 8.11e-54 | 179 |
MS.gene044393.t1 | MTR_3g064580 | 54.430 | 158 | 69 | 2 | 15 | 170 | 4 | 160 | 1.24e-53 | 187 |
MS.gene044393.t1 | MTR_7g005280 | 48.936 | 188 | 85 | 5 | 10 | 193 | 8 | 188 | 2.23e-53 | 177 |
MS.gene044393.t1 | MTR_2g079990 | 46.114 | 193 | 78 | 2 | 14 | 180 | 13 | 205 | 2.68e-53 | 181 |
MS.gene044393.t1 | MTR_6g477900 | 53.595 | 153 | 67 | 2 | 17 | 167 | 6 | 156 | 4.75e-53 | 176 |
MS.gene044393.t1 | MTR_8g467490 | 45.361 | 194 | 84 | 3 | 19 | 203 | 16 | 196 | 5.71e-53 | 180 |
MS.gene044393.t1 | MTR_3g096920 | 49.432 | 176 | 75 | 3 | 14 | 182 | 4 | 172 | 9.70e-53 | 176 |
MS.gene044393.t1 | MTR_5g076850 | 53.165 | 158 | 70 | 3 | 15 | 170 | 4 | 159 | 3.14e-52 | 183 |
MS.gene044393.t1 | MTR_5g040420 | 49.153 | 177 | 76 | 4 | 13 | 177 | 8 | 182 | 1.06e-51 | 176 |
MS.gene044393.t1 | MTR_6g011860 | 49.693 | 163 | 74 | 2 | 16 | 170 | 14 | 176 | 1.32e-51 | 176 |
MS.gene044393.t1 | MTR_3g096140 | 51.592 | 157 | 72 | 2 | 19 | 173 | 9 | 163 | 1.07e-50 | 171 |
MS.gene044393.t1 | MTR_2g093810 | 51.875 | 160 | 63 | 3 | 17 | 167 | 14 | 168 | 3.60e-50 | 171 |
MS.gene044393.t1 | MTR_5g014300 | 45.078 | 193 | 83 | 4 | 17 | 191 | 6 | 193 | 3.72e-50 | 171 |
MS.gene044393.t1 | MTR_3g096140 | 51.592 | 157 | 72 | 2 | 19 | 173 | 9 | 163 | 5.89e-50 | 171 |
MS.gene044393.t1 | MTR_3g096920 | 60.465 | 129 | 50 | 1 | 14 | 142 | 4 | 131 | 2.78e-49 | 169 |
MS.gene044393.t1 | MTR_4g098630 | 47.674 | 172 | 83 | 3 | 13 | 179 | 2 | 171 | 6.12e-49 | 167 |
MS.gene044393.t1 | MTR_3g093050 | 54.902 | 153 | 65 | 2 | 17 | 167 | 22 | 172 | 1.08e-48 | 173 |
MS.gene044393.t1 | MTR_1g090723 | 49.189 | 185 | 80 | 6 | 19 | 195 | 10 | 188 | 1.31e-48 | 173 |
MS.gene044393.t1 | MTR_3g093050 | 54.902 | 153 | 65 | 2 | 17 | 167 | 22 | 172 | 1.62e-48 | 173 |
MS.gene044393.t1 | MTR_1g090723 | 48.913 | 184 | 81 | 6 | 19 | 195 | 10 | 187 | 2.18e-48 | 172 |
MS.gene044393.t1 | MTR_1g090723 | 48.913 | 184 | 81 | 6 | 19 | 195 | 10 | 187 | 2.38e-48 | 172 |
MS.gene044393.t1 | MTR_5g069030 | 52.663 | 169 | 69 | 4 | 2 | 167 | 15 | 175 | 2.64e-48 | 172 |
MS.gene044393.t1 | MTR_3g093040 | 50.000 | 160 | 66 | 3 | 15 | 167 | 106 | 258 | 7.99e-47 | 162 |
MS.gene044393.t1 | MTR_0036s0150 | 52.174 | 161 | 65 | 5 | 19 | 173 | 7 | 161 | 1.22e-46 | 166 |
MS.gene044393.t1 | MTR_8g063550 | 47.799 | 159 | 79 | 2 | 17 | 173 | 6 | 162 | 1.60e-46 | 162 |
MS.gene044393.t1 | MTR_8g063550 | 47.799 | 159 | 79 | 2 | 17 | 173 | 6 | 162 | 3.12e-46 | 163 |
MS.gene044393.t1 | MTR_8g063550 | 47.799 | 159 | 79 | 2 | 17 | 173 | 6 | 162 | 3.99e-46 | 163 |
MS.gene044393.t1 | MTR_5g090970 | 36.268 | 284 | 149 | 10 | 4 | 266 | 3 | 275 | 6.20e-46 | 159 |
MS.gene044393.t1 | MTR_4g134460 | 49.080 | 163 | 70 | 4 | 19 | 177 | 56 | 209 | 2.12e-45 | 161 |
MS.gene044393.t1 | MTR_1g097300 | 47.853 | 163 | 81 | 2 | 13 | 173 | 15 | 175 | 2.54e-45 | 163 |
MS.gene044393.t1 | MTR_1g090720 | 50.932 | 161 | 73 | 2 | 17 | 171 | 42 | 202 | 2.66e-45 | 162 |
MS.gene044393.t1 | MTR_5g090970 | 36.268 | 284 | 148 | 11 | 4 | 266 | 3 | 274 | 9.34e-45 | 156 |
MS.gene044393.t1 | MTR_8g093580 | 45.912 | 159 | 82 | 2 | 17 | 173 | 6 | 162 | 1.41e-44 | 160 |
MS.gene044393.t1 | MTR_2g086880 | 41.026 | 195 | 94 | 4 | 19 | 211 | 20 | 195 | 2.02e-43 | 157 |
MS.gene044393.t1 | MTR_2g086880 | 48.980 | 147 | 65 | 2 | 19 | 164 | 20 | 157 | 3.27e-43 | 158 |
MS.gene044393.t1 | MTR_4g075980 | 44.000 | 175 | 83 | 5 | 1 | 172 | 4 | 166 | 3.42e-43 | 152 |
MS.gene044393.t1 | MTR_2g068880 | 42.328 | 189 | 90 | 5 | 1 | 174 | 9 | 193 | 7.74e-43 | 151 |
MS.gene044393.t1 | MTR_2g068920 | 42.775 | 173 | 84 | 4 | 16 | 173 | 19 | 191 | 6.98e-42 | 148 |
MS.gene044393.t1 | MTR_3g096140 | 48.951 | 143 | 69 | 2 | 33 | 173 | 2 | 142 | 1.98e-40 | 145 |
MS.gene044393.t1 | MTR_8g099750 | 42.500 | 160 | 85 | 3 | 17 | 171 | 14 | 171 | 5.20e-39 | 139 |
MS.gene044393.t1 | MTR_8g023840 | 46.012 | 163 | 75 | 7 | 7 | 164 | 1 | 155 | 1.65e-37 | 139 |
MS.gene044393.t1 | MTR_3g098810 | 42.138 | 159 | 82 | 4 | 17 | 167 | 14 | 170 | 3.25e-37 | 134 |
MS.gene044393.t1 | MTR_3g098810 | 43.151 | 146 | 74 | 3 | 1 | 142 | 1 | 141 | 2.35e-34 | 125 |
MS.gene044393.t1 | MTR_8g023860 | 44.805 | 154 | 72 | 7 | 17 | 165 | 12 | 157 | 1.88e-33 | 129 |
MS.gene044393.t1 | MTR_8g094580 | 57.944 | 107 | 36 | 3 | 66 | 167 | 2 | 104 | 3.09e-33 | 124 |
MS.gene044393.t1 | MTR_2g086690 | 37.975 | 158 | 90 | 4 | 16 | 165 | 3 | 160 | 5.57e-32 | 120 |
MS.gene044393.t1 | MTR_4g052620 | 40.881 | 159 | 81 | 5 | 17 | 165 | 5 | 160 | 6.95e-32 | 120 |
MS.gene044393.t1 | MTR_8g023880 | 39.336 | 211 | 84 | 11 | 17 | 197 | 7 | 203 | 3.05e-31 | 119 |
MS.gene044393.t1 | MTR_8g023900 | 40.764 | 157 | 82 | 6 | 17 | 168 | 12 | 162 | 6.78e-30 | 119 |
MS.gene044393.t1 | MTR_8g023900 | 38.272 | 162 | 80 | 8 | 17 | 167 | 188 | 340 | 1.45e-27 | 113 |
MS.gene044393.t1 | MTR_7g105170 | 39.024 | 164 | 88 | 6 | 16 | 168 | 3 | 165 | 1.46e-29 | 114 |
MS.gene044393.t1 | MTR_4g094302 | 36.264 | 182 | 95 | 5 | 17 | 185 | 11 | 184 | 1.59e-29 | 112 |
MS.gene044393.t1 | MTR_8g023930 | 36.686 | 169 | 94 | 7 | 17 | 180 | 24 | 184 | 5.64e-29 | 117 |
MS.gene044393.t1 | MTR_4g094302 | 41.406 | 128 | 65 | 2 | 17 | 142 | 11 | 130 | 2.61e-27 | 105 |
MS.gene044393.t1 | MTR_8g093790 | 39.735 | 151 | 69 | 5 | 17 | 167 | 10 | 138 | 3.87e-25 | 100 |
MS.gene044393.t1 | MTR_3g096400 | 38.690 | 168 | 79 | 8 | 13 | 166 | 3 | 160 | 2.78e-23 | 96.7 |
MS.gene044393.t1 | MTR_7g070140 | 51.250 | 80 | 37 | 1 | 70 | 147 | 17 | 96 | 1.39e-22 | 92.4 |
MS.gene044393.t1 | MTR_7g083360 | 32.308 | 130 | 82 | 5 | 14 | 140 | 7 | 133 | 6.18e-17 | 77.4 |
MS.gene044393.t1 | MTR_7g083330 | 31.818 | 132 | 84 | 5 | 12 | 140 | 13 | 141 | 2.79e-15 | 73.9 |
MS.gene044393.t1 | MTR_7g083370 | 30.769 | 130 | 80 | 5 | 16 | 140 | 9 | 133 | 7.10e-15 | 71.6 |
MS.gene044393.t1 | MTR_7g070150 | 50.847 | 59 | 24 | 2 | 109 | 167 | 4 | 57 | 8.94e-14 | 67.0 |
MS.gene044393.t1 | MTR_8g102240 | 29.775 | 178 | 93 | 7 | 15 | 168 | 45 | 214 | 5.13e-11 | 64.3 |
MS.gene044393.t1 | MTR_8g102240 | 29.775 | 178 | 93 | 7 | 15 | 168 | 45 | 214 | 5.14e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene044393.t1 | AT5G61430 | 60.282 | 355 | 110 | 11 | 10 | 360 | 9 | 336 | 1.32e-145 | 415 |
MS.gene044393.t1 | AT5G07680 | 56.474 | 363 | 121 | 13 | 1 | 360 | 1 | 329 | 1.76e-131 | 379 |
MS.gene044393.t1 | AT5G07680 | 57.349 | 347 | 115 | 13 | 15 | 360 | 1 | 315 | 1.27e-127 | 369 |
MS.gene044393.t1 | AT5G61430 | 56.856 | 299 | 98 | 11 | 66 | 360 | 2 | 273 | 7.62e-107 | 314 |
MS.gene044393.t1 | AT5G39610 | 70.755 | 212 | 56 | 2 | 10 | 221 | 13 | 218 | 1.98e-104 | 308 |
MS.gene044393.t1 | AT5G18270 | 49.254 | 335 | 108 | 8 | 1 | 320 | 5 | 292 | 3.28e-99 | 297 |
MS.gene044393.t1 | AT5G18270 | 48.955 | 335 | 109 | 8 | 1 | 320 | 5 | 292 | 8.63e-99 | 296 |
MS.gene044393.t1 | AT3G29035 | 74.479 | 192 | 35 | 2 | 10 | 201 | 17 | 194 | 8.84e-99 | 295 |
MS.gene044393.t1 | AT3G04060 | 46.246 | 333 | 144 | 3 | 4 | 331 | 7 | 309 | 8.40e-93 | 281 |
MS.gene044393.t1 | AT3G15170 | 63.551 | 214 | 66 | 4 | 11 | 221 | 15 | 219 | 5.81e-89 | 270 |
MS.gene044393.t1 | AT5G53950 | 76.074 | 163 | 37 | 1 | 17 | 177 | 17 | 179 | 1.66e-88 | 271 |
MS.gene044393.t1 | AT3G18400 | 57.511 | 233 | 86 | 5 | 16 | 244 | 4 | 227 | 5.58e-85 | 260 |
MS.gene044393.t1 | AT2G24430 | 69.277 | 166 | 44 | 3 | 10 | 173 | 11 | 171 | 7.38e-79 | 244 |
MS.gene044393.t1 | AT2G24430 | 69.277 | 166 | 44 | 3 | 10 | 173 | 11 | 171 | 7.38e-79 | 244 |
MS.gene044393.t1 | AT1G76420 | 64.671 | 167 | 54 | 2 | 4 | 168 | 9 | 172 | 3.10e-72 | 228 |
MS.gene044393.t1 | AT3G12977 | 47.945 | 219 | 102 | 4 | 16 | 233 | 17 | 224 | 9.64e-69 | 217 |
MS.gene044393.t1 | AT1G56010 | 41.176 | 289 | 133 | 10 | 17 | 291 | 19 | 284 | 1.10e-64 | 208 |
MS.gene044393.t1 | AT4G27410 | 54.217 | 166 | 74 | 1 | 14 | 179 | 11 | 174 | 1.48e-60 | 197 |
MS.gene044393.t1 | AT3G04070 | 55.294 | 170 | 66 | 3 | 11 | 170 | 4 | 173 | 7.54e-60 | 196 |
MS.gene044393.t1 | AT2G18060 | 54.601 | 163 | 67 | 3 | 13 | 172 | 5 | 163 | 2.55e-59 | 196 |
MS.gene044393.t1 | AT2G18060 | 54.601 | 163 | 67 | 3 | 13 | 172 | 5 | 163 | 2.55e-59 | 196 |
MS.gene044393.t1 | AT1G12260 | 58.228 | 158 | 59 | 3 | 17 | 171 | 7 | 160 | 2.62e-59 | 195 |
MS.gene044393.t1 | AT1G12260 | 58.228 | 158 | 59 | 3 | 17 | 171 | 7 | 160 | 3.87e-59 | 196 |
MS.gene044393.t1 | AT4G10350 | 58.974 | 156 | 55 | 3 | 17 | 167 | 9 | 160 | 1.47e-58 | 193 |
MS.gene044393.t1 | AT1G62700 | 58.861 | 158 | 58 | 3 | 17 | 171 | 7 | 160 | 1.71e-58 | 194 |
MS.gene044393.t1 | AT1G62700 | 58.861 | 158 | 58 | 3 | 17 | 171 | 7 | 160 | 1.71e-58 | 194 |
MS.gene044393.t1 | AT4G36160 | 55.346 | 159 | 64 | 3 | 12 | 167 | 5 | 159 | 4.94e-58 | 192 |
MS.gene044393.t1 | AT4G36160 | 55.346 | 159 | 64 | 3 | 12 | 167 | 5 | 159 | 4.94e-58 | 192 |
MS.gene044393.t1 | AT4G36160 | 55.346 | 159 | 64 | 3 | 12 | 167 | 9 | 163 | 6.28e-58 | 192 |
MS.gene044393.t1 | AT3G04070 | 50.538 | 186 | 66 | 3 | 11 | 170 | 4 | 189 | 2.79e-57 | 190 |
MS.gene044393.t1 | AT5G04410 | 58.385 | 161 | 59 | 3 | 17 | 173 | 9 | 165 | 5.24e-57 | 195 |
MS.gene044393.t1 | AT1G33280 | 57.143 | 154 | 58 | 3 | 17 | 167 | 8 | 156 | 8.25e-57 | 187 |
MS.gene044393.t1 | AT2G46770 | 52.941 | 170 | 66 | 4 | 17 | 172 | 16 | 185 | 1.17e-56 | 189 |
MS.gene044393.t1 | AT1G71930 | 53.247 | 154 | 65 | 2 | 17 | 167 | 9 | 158 | 1.45e-56 | 187 |
MS.gene044393.t1 | AT1G71930 | 53.247 | 154 | 65 | 2 | 17 | 167 | 9 | 158 | 1.45e-56 | 187 |
MS.gene044393.t1 | AT5G62380 | 57.143 | 154 | 59 | 3 | 17 | 167 | 7 | 156 | 1.57e-56 | 188 |
MS.gene044393.t1 | AT5G62380 | 57.143 | 154 | 59 | 3 | 17 | 167 | 7 | 156 | 1.57e-56 | 188 |
MS.gene044393.t1 | AT3G10500 | 55.901 | 161 | 63 | 3 | 17 | 173 | 9 | 165 | 2.29e-56 | 192 |
MS.gene044393.t1 | AT1G61110 | 50.543 | 184 | 72 | 3 | 17 | 185 | 16 | 195 | 3.36e-56 | 186 |
MS.gene044393.t1 | AT4G27410 | 49.180 | 183 | 74 | 2 | 14 | 179 | 11 | 191 | 3.40e-56 | 186 |
MS.gene044393.t1 | AT1G69490 | 55.063 | 158 | 69 | 1 | 17 | 172 | 9 | 166 | 5.64e-56 | 184 |
MS.gene044393.t1 | AT1G01720 | 53.614 | 166 | 68 | 3 | 13 | 173 | 3 | 164 | 2.16e-55 | 183 |
MS.gene044393.t1 | AT5G66300 | 50.307 | 163 | 75 | 2 | 11 | 170 | 6 | 165 | 3.49e-55 | 183 |
MS.gene044393.t1 | AT3G15500 | 51.497 | 167 | 79 | 1 | 14 | 180 | 11 | 175 | 3.67e-55 | 183 |
MS.gene044393.t1 | AT1G52890 | 52.000 | 175 | 81 | 2 | 14 | 187 | 11 | 183 | 4.59e-55 | 183 |
MS.gene044393.t1 | AT3G61910 | 49.412 | 170 | 72 | 2 | 17 | 172 | 11 | 180 | 1.03e-54 | 183 |
MS.gene044393.t1 | AT1G33060 | 56.129 | 155 | 64 | 2 | 17 | 169 | 24 | 176 | 1.05e-54 | 190 |
MS.gene044393.t1 | AT1G33060 | 56.129 | 155 | 64 | 2 | 17 | 169 | 24 | 176 | 1.07e-54 | 190 |
MS.gene044393.t1 | AT4G35580 | 56.863 | 153 | 62 | 2 | 17 | 167 | 9 | 159 | 2.24e-54 | 187 |
MS.gene044393.t1 | AT3G17730 | 54.248 | 153 | 66 | 2 | 17 | 167 | 6 | 156 | 2.28e-54 | 179 |
MS.gene044393.t1 | AT4G35580 | 56.863 | 153 | 62 | 2 | 17 | 167 | 9 | 159 | 2.53e-54 | 187 |
MS.gene044393.t1 | AT4G35580 | 56.863 | 153 | 62 | 2 | 17 | 167 | 9 | 159 | 3.14e-54 | 187 |
MS.gene044393.t1 | AT5G08790 | 53.374 | 163 | 72 | 2 | 14 | 173 | 4 | 165 | 1.43e-53 | 178 |
MS.gene044393.t1 | AT1G32770 | 47.500 | 200 | 93 | 4 | 17 | 205 | 16 | 214 | 2.51e-53 | 180 |
MS.gene044393.t1 | AT1G77450 | 52.121 | 165 | 77 | 2 | 10 | 173 | 3 | 166 | 5.15e-53 | 176 |
MS.gene044393.t1 | AT1G65910 | 52.174 | 161 | 73 | 2 | 15 | 173 | 4 | 162 | 5.42e-53 | 185 |
MS.gene044393.t1 | AT5G46590 | 52.410 | 166 | 75 | 3 | 17 | 179 | 6 | 170 | 7.86e-53 | 177 |
MS.gene044393.t1 | AT3G10490 | 53.503 | 157 | 70 | 2 | 17 | 171 | 27 | 182 | 8.61e-53 | 175 |
MS.gene044393.t1 | AT3G10480 | 54.777 | 157 | 68 | 2 | 17 | 171 | 27 | 182 | 1.18e-52 | 181 |
MS.gene044393.t1 | AT4G28530 | 50.888 | 169 | 59 | 4 | 17 | 167 | 10 | 172 | 2.14e-52 | 177 |
MS.gene044393.t1 | AT1G26870 | 45.000 | 220 | 99 | 6 | 9 | 217 | 6 | 214 | 2.29e-52 | 179 |
MS.gene044393.t1 | AT3G15510 | 39.721 | 287 | 142 | 10 | 21 | 291 | 21 | 292 | 2.46e-52 | 177 |
MS.gene044393.t1 | AT5G13180 | 49.714 | 175 | 77 | 4 | 1 | 173 | 1 | 166 | 2.75e-52 | 174 |
MS.gene044393.t1 | AT1G79580 | 51.176 | 170 | 69 | 4 | 14 | 179 | 14 | 173 | 3.80e-52 | 177 |
MS.gene044393.t1 | AT1G79580 | 51.176 | 170 | 69 | 4 | 14 | 179 | 14 | 173 | 3.80e-52 | 177 |
MS.gene044393.t1 | AT1G79580 | 51.176 | 170 | 69 | 4 | 14 | 179 | 14 | 173 | 3.80e-52 | 177 |
MS.gene044393.t1 | AT1G79580 | 51.176 | 170 | 69 | 4 | 14 | 179 | 14 | 173 | 3.80e-52 | 177 |
MS.gene044393.t1 | AT1G79580 | 51.176 | 170 | 69 | 4 | 14 | 179 | 14 | 173 | 3.80e-52 | 177 |
MS.gene044393.t1 | AT1G54330 | 56.129 | 155 | 61 | 2 | 15 | 167 | 4 | 153 | 5.37e-52 | 175 |
MS.gene044393.t1 | AT3G10480 | 55.414 | 157 | 66 | 2 | 17 | 171 | 27 | 181 | 6.28e-52 | 179 |
MS.gene044393.t1 | AT3G03200 | 54.140 | 157 | 65 | 3 | 15 | 167 | 4 | 157 | 1.22e-51 | 179 |
MS.gene044393.t1 | AT2G33480 | 52.663 | 169 | 67 | 4 | 1 | 167 | 1 | 158 | 2.17e-51 | 172 |
MS.gene044393.t1 | AT3G10490 | 53.503 | 157 | 70 | 2 | 17 | 171 | 27 | 182 | 2.26e-51 | 177 |
MS.gene044393.t1 | AT5G63790 | 50.898 | 167 | 78 | 2 | 10 | 173 | 43 | 208 | 2.97e-51 | 173 |
MS.gene044393.t1 | AT5G63790 | 50.898 | 167 | 78 | 2 | 10 | 173 | 53 | 218 | 3.19e-51 | 173 |
MS.gene044393.t1 | AT5G46590 | 60.465 | 129 | 48 | 2 | 17 | 142 | 6 | 134 | 8.28e-51 | 171 |
MS.gene044393.t1 | AT2G33480 | 52.695 | 167 | 72 | 3 | 1 | 167 | 1 | 160 | 9.83e-51 | 171 |
MS.gene044393.t1 | AT5G17260 | 53.503 | 157 | 66 | 3 | 15 | 167 | 4 | 157 | 1.83e-50 | 175 |
MS.gene044393.t1 | AT5G39820 | 47.429 | 175 | 67 | 3 | 19 | 170 | 22 | 194 | 4.85e-50 | 171 |
MS.gene044393.t1 | AT2G43000 | 44.444 | 171 | 93 | 2 | 7 | 176 | 7 | 176 | 6.24e-49 | 166 |
MS.gene044393.t1 | AT4G17980 | 42.995 | 207 | 111 | 3 | 17 | 216 | 6 | 212 | 2.13e-48 | 165 |
MS.gene044393.t1 | AT4G17980 | 42.995 | 207 | 111 | 3 | 17 | 216 | 6 | 212 | 2.27e-48 | 164 |
MS.gene044393.t1 | AT5G24590 | 52.597 | 154 | 68 | 3 | 17 | 167 | 13 | 164 | 4.40e-48 | 169 |
MS.gene044393.t1 | AT3G49530 | 50.292 | 171 | 71 | 7 | 2 | 167 | 3 | 164 | 2.41e-47 | 166 |
MS.gene044393.t1 | AT2G02450 | 52.000 | 150 | 67 | 2 | 19 | 167 | 53 | 198 | 5.44e-47 | 164 |
MS.gene044393.t1 | AT3G49530 | 50.292 | 171 | 71 | 7 | 2 | 167 | 3 | 164 | 6.86e-47 | 166 |
MS.gene044393.t1 | AT2G02450 | 52.000 | 150 | 67 | 2 | 19 | 167 | 53 | 198 | 7.64e-47 | 164 |
MS.gene044393.t1 | AT3G10480 | 45.263 | 190 | 68 | 2 | 17 | 171 | 27 | 215 | 1.02e-46 | 166 |
MS.gene044393.t1 | AT5G64060 | 44.785 | 163 | 84 | 3 | 14 | 173 | 3 | 162 | 1.02e-46 | 162 |
MS.gene044393.t1 | AT5G09330 | 34.717 | 265 | 146 | 8 | 14 | 271 | 3 | 247 | 1.97e-46 | 165 |
MS.gene044393.t1 | AT5G09330 | 34.717 | 265 | 146 | 8 | 14 | 271 | 3 | 247 | 1.97e-46 | 165 |
MS.gene044393.t1 | AT5G09330 | 34.717 | 265 | 146 | 8 | 14 | 271 | 3 | 247 | 1.97e-46 | 165 |
MS.gene044393.t1 | AT5G09330 | 34.717 | 265 | 146 | 8 | 14 | 271 | 3 | 247 | 1.97e-46 | 165 |
MS.gene044393.t1 | AT5G09330 | 34.717 | 265 | 146 | 8 | 14 | 271 | 3 | 247 | 1.97e-46 | 165 |
MS.gene044393.t1 | AT1G52880 | 51.250 | 160 | 68 | 2 | 21 | 170 | 21 | 180 | 2.92e-46 | 160 |
MS.gene044393.t1 | AT3G12977 | 46.746 | 169 | 78 | 4 | 66 | 233 | 14 | 171 | 3.71e-46 | 157 |
MS.gene044393.t1 | AT2G27300 | 48.148 | 162 | 69 | 4 | 17 | 172 | 14 | 166 | 6.37e-46 | 160 |
MS.gene044393.t1 | AT2G17040 | 47.134 | 157 | 73 | 3 | 19 | 172 | 8 | 157 | 5.72e-45 | 155 |
MS.gene044393.t1 | AT1G56010 | 39.004 | 241 | 107 | 9 | 66 | 291 | 2 | 217 | 1.08e-44 | 154 |
MS.gene044393.t1 | AT1G34180 | 48.408 | 157 | 77 | 2 | 19 | 173 | 18 | 172 | 1.70e-44 | 159 |
MS.gene044393.t1 | AT1G34190 | 47.205 | 161 | 73 | 3 | 19 | 173 | 18 | 172 | 7.57e-44 | 159 |
MS.gene044393.t1 | AT1G34180 | 48.408 | 157 | 77 | 2 | 19 | 173 | 18 | 172 | 1.03e-43 | 159 |
MS.gene044393.t1 | AT1G34180 | 45.562 | 169 | 76 | 3 | 19 | 173 | 18 | 184 | 1.07e-42 | 154 |
MS.gene044393.t1 | AT5G22290 | 46.939 | 147 | 69 | 2 | 19 | 164 | 23 | 161 | 1.52e-42 | 151 |
MS.gene044393.t1 | AT1G34180 | 45.562 | 169 | 76 | 3 | 19 | 173 | 18 | 184 | 4.31e-42 | 155 |
MS.gene044393.t1 | AT3G12910 | 43.258 | 178 | 85 | 5 | 11 | 173 | 15 | 191 | 6.46e-42 | 149 |
MS.gene044393.t1 | AT1G32510 | 40.465 | 215 | 97 | 7 | 17 | 218 | 6 | 202 | 8.29e-42 | 147 |
MS.gene044393.t1 | AT1G32870 | 48.466 | 163 | 80 | 2 | 13 | 173 | 6 | 166 | 2.18e-41 | 152 |
MS.gene044393.t1 | AT1G32870 | 48.466 | 163 | 80 | 2 | 13 | 173 | 6 | 166 | 2.25e-41 | 152 |
MS.gene044393.t1 | AT1G32870 | 48.466 | 163 | 80 | 2 | 13 | 173 | 42 | 202 | 4.86e-41 | 152 |
MS.gene044393.t1 | AT3G44290 | 45.000 | 160 | 73 | 3 | 19 | 172 | 16 | 166 | 1.73e-40 | 142 |
MS.gene044393.t1 | AT3G44290 | 45.000 | 160 | 73 | 3 | 19 | 172 | 16 | 166 | 4.09e-40 | 144 |
MS.gene044393.t1 | AT5G04395 | 48.592 | 142 | 57 | 2 | 17 | 142 | 28 | 169 | 3.60e-37 | 132 |
MS.gene044393.t1 | AT4G10350 | 57.658 | 111 | 38 | 3 | 62 | 167 | 7 | 113 | 8.76e-36 | 132 |
MS.gene044393.t1 | AT4G28530 | 46.875 | 128 | 50 | 2 | 17 | 126 | 10 | 137 | 6.25e-31 | 119 |
MS.gene044393.t1 | AT2G33480 | 57.143 | 98 | 40 | 1 | 70 | 167 | 8 | 103 | 3.22e-30 | 115 |
MS.gene044393.t1 | AT4G01550 | 39.873 | 158 | 82 | 5 | 20 | 171 | 7 | 157 | 9.87e-29 | 116 |
MS.gene044393.t1 | AT3G44350 | 38.182 | 165 | 91 | 5 | 16 | 172 | 4 | 165 | 4.78e-28 | 110 |
MS.gene044393.t1 | AT5G64530 | 34.031 | 191 | 91 | 5 | 15 | 191 | 1 | 170 | 1.45e-27 | 107 |
MS.gene044393.t1 | AT3G04420 | 38.854 | 157 | 85 | 4 | 15 | 167 | 1 | 150 | 2.65e-27 | 109 |
MS.gene044393.t1 | AT3G04420 | 38.854 | 157 | 85 | 4 | 15 | 167 | 1 | 150 | 6.26e-27 | 109 |
MS.gene044393.t1 | AT1G02230 | 38.922 | 167 | 83 | 7 | 18 | 177 | 4 | 158 | 8.45e-27 | 109 |
MS.gene044393.t1 | AT5G22380 | 36.025 | 161 | 94 | 5 | 20 | 172 | 8 | 167 | 1.83e-26 | 105 |
MS.gene044393.t1 | AT5G64530 | 40.769 | 130 | 63 | 3 | 15 | 142 | 1 | 118 | 2.05e-25 | 100 |
MS.gene044393.t1 | AT4G01520 | 35.758 | 165 | 92 | 6 | 15 | 172 | 2 | 159 | 3.71e-25 | 103 |
MS.gene044393.t1 | AT4G01540 | 36.250 | 160 | 88 | 6 | 20 | 172 | 7 | 159 | 1.09e-24 | 104 |
MS.gene044393.t1 | AT4G01540 | 36.250 | 160 | 88 | 6 | 20 | 172 | 7 | 159 | 1.65e-24 | 103 |
MS.gene044393.t1 | AT3G44350 | 38.776 | 147 | 80 | 4 | 16 | 154 | 4 | 148 | 1.79e-24 | 98.2 |
MS.gene044393.t1 | AT4G01540 | 36.250 | 160 | 88 | 6 | 20 | 172 | 7 | 159 | 2.05e-24 | 104 |
MS.gene044393.t1 | AT4G01540 | 36.250 | 160 | 88 | 6 | 20 | 172 | 7 | 159 | 2.32e-24 | 103 |
MS.gene044393.t1 | AT2G18060 | 56.410 | 78 | 30 | 2 | 95 | 172 | 2 | 75 | 4.86e-24 | 100 |
MS.gene044393.t1 | AT1G02220 | 40.000 | 130 | 71 | 3 | 15 | 140 | 1 | 127 | 2.50e-23 | 100 |
MS.gene044393.t1 | AT3G10490 | 54.878 | 82 | 36 | 1 | 90 | 171 | 2 | 82 | 7.37e-23 | 98.6 |
MS.gene044393.t1 | AT3G10490 | 54.878 | 82 | 36 | 1 | 90 | 171 | 2 | 82 | 7.37e-23 | 98.6 |
MS.gene044393.t1 | AT1G02250 | 31.532 | 222 | 106 | 9 | 15 | 194 | 1 | 218 | 8.70e-23 | 98.2 |
MS.gene044393.t1 | AT1G01010 | 33.491 | 212 | 105 | 10 | 20 | 215 | 6 | 197 | 5.25e-22 | 97.1 |
MS.gene044393.t1 | AT2G43000 | 40.404 | 99 | 58 | 1 | 78 | 176 | 1 | 98 | 5.81e-21 | 89.7 |
MS.gene044393.t1 | AT5G14000 | 35.802 | 162 | 94 | 4 | 15 | 173 | 13 | 167 | 1.03e-20 | 89.4 |
MS.gene044393.t1 | AT5G14000 | 38.571 | 140 | 80 | 3 | 15 | 150 | 13 | 150 | 2.72e-20 | 87.0 |
MS.gene044393.t1 | AT5G50820 | 32.941 | 170 | 84 | 7 | 15 | 169 | 15 | 169 | 1.27e-17 | 80.5 |
MS.gene044393.t1 | AT3G56530 | 30.921 | 152 | 98 | 3 | 17 | 165 | 52 | 199 | 5.88e-16 | 78.2 |
MS.gene044393.t1 | AT5G22290 | 46.377 | 69 | 29 | 1 | 96 | 164 | 2 | 62 | 6.30e-16 | 77.0 |
MS.gene044393.t1 | AT3G55210 | 33.721 | 172 | 90 | 8 | 17 | 172 | 11 | 174 | 1.74e-15 | 76.3 |
MS.gene044393.t1 | AT5G14490 | 34.266 | 143 | 76 | 4 | 17 | 142 | 55 | 196 | 2.00e-13 | 70.9 |
MS.gene044393.t1 | AT5G14490 | 34.266 | 143 | 76 | 4 | 17 | 142 | 58 | 199 | 2.12e-13 | 70.9 |
MS.gene044393.t1 | AT5G14490 | 34.266 | 143 | 76 | 4 | 17 | 142 | 55 | 196 | 3.13e-13 | 69.7 |
MS.gene044393.t1 | AT5G14490 | 34.266 | 143 | 76 | 4 | 17 | 142 | 58 | 199 | 3.20e-13 | 70.5 |
MS.gene044393.t1 | AT4G29230 | 30.460 | 174 | 88 | 7 | 17 | 165 | 47 | 212 | 2.44e-12 | 68.2 |
MS.gene044393.t1 | AT3G04430 | 30.534 | 131 | 79 | 3 | 23 | 141 | 6 | 136 | 3.21e-12 | 65.5 |
MS.gene044393.t1 | AT4G28500 | 34.028 | 144 | 75 | 5 | 17 | 142 | 59 | 200 | 3.90e-12 | 66.6 |
MS.gene044393.t1 | AT3G56520 | 27.473 | 182 | 94 | 8 | 17 | 179 | 8 | 170 | 4.02e-12 | 64.7 |
Find 59 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATTCAACAACTCAATTTA+TGG | 0.161606 | 8.4:-18603212 | MS.gene044393:CDS |
AAGAATACCTTTGCAGCTTT+TGG | 0.230826 | 8.4:+18603572 | None:intergenic |
GATTCACTTGGTAATGAATT+TGG | 0.258463 | 8.4:-18603368 | MS.gene044393:CDS |
AAGTCATTACCTTTACAAAA+AGG | 0.312749 | 8.4:-18604060 | MS.gene044393:CDS |
CCATTAGAAGATGAACTTCT+TGG | 0.324565 | 8.4:+18603155 | None:intergenic |
CAATATCCTAGTTCTGTTTG+TGG | 0.332743 | 8.4:-18603095 | MS.gene044393:CDS |
CCAAGAAGTTCATCTTCTAA+TGG | 0.365852 | 8.4:-18603155 | MS.gene044393:CDS |
GAGAAGATGGATTTGCCTCC+TGG | 0.385429 | 8.4:-18604116 | MS.gene044393:CDS |
AATCAAACAATTGAATGATT+CGG | 0.401710 | 8.4:-18603297 | MS.gene044393:CDS |
GCAGGGTATTGGAAAGCAAC+TGG | 0.414845 | 8.4:-18603743 | MS.gene044393:CDS |
AGAGACAGAAAATATCCAAC+TGG | 0.424929 | 8.4:-18603791 | MS.gene044393:CDS |
GAGCAACAGAAGCAGGGTAT+TGG | 0.425676 | 8.4:-18603754 | MS.gene044393:CDS |
ACAAACAGAGCAACAGAAGC+AGG | 0.435579 | 8.4:-18603761 | MS.gene044393:CDS |
TATTTCTGGTATAATGAGGT+TGG | 0.436493 | 8.4:-18603390 | MS.gene044393:CDS |
CATTAGAAGATGAACTTCTT+GGG | 0.443626 | 8.4:+18603156 | None:intergenic |
ATCAATTGAGTTGGAGAAGC+AGG | 0.451718 | 8.4:+18603265 | None:intergenic |
CTGATTCGTCGAATTCGATT+GGG | 0.452226 | 8.4:-18603322 | MS.gene044393:CDS |
AGAATGAATGGGTGATTTGT+AGG | 0.455073 | 8.4:-18603448 | MS.gene044393:CDS |
CCTCAACAAGTCTGAACCTT+GGG | 0.462640 | 8.4:-18603994 | MS.gene044393:CDS |
AATTTCTCTGCAAGAGCCAT+TGG | 0.466190 | 8.4:-18604026 | MS.gene044393:CDS |
CTGTTTGTCCTCAACCCAGT+TGG | 0.474621 | 8.4:+18603776 | None:intergenic |
ACTGATTCGTCGAATTCGAT+TGG | 0.482670 | 8.4:-18603323 | MS.gene044393:CDS |
CACATATTTCTGGTATAATG+AGG | 0.489545 | 8.4:-18603394 | MS.gene044393:CDS |
CTTATAAGCTCTTCATCAGT+CGG | 0.490590 | 8.4:+18604080 | None:intergenic |
GATGAGTGTATCACAGGAAA+CGG | 0.491856 | 8.4:-18603000 | MS.gene044393:CDS |
AAATAAGGAAGATGAGAAGA+TGG | 0.499515 | 8.4:-18604129 | MS.gene044393:CDS |
GTCGGGTGAAATCGAAATCC+AGG | 0.501638 | 8.4:+18604098 | None:intergenic |
TCAACAGCTGCAACAGAAGC+AGG | 0.510943 | 8.4:+18602882 | None:intergenic |
TCTTTGAACATCAATTGAGT+TGG | 0.511446 | 8.4:+18603256 | None:intergenic |
GAAAATATCCAACTGGGTTG+AGG | 0.516250 | 8.4:-18603784 | MS.gene044393:CDS |
ATGCATGAATATCGACTTGA+GGG | 0.521465 | 8.4:-18603617 | MS.gene044393:CDS |
TACTTACATGGTAAATCCCA+AGG | 0.522817 | 8.4:+18603978 | None:intergenic |
ATGAATCAAAGATCCCTCCT+TGG | 0.526043 | 8.4:+18603231 | None:intergenic |
CCCAAGGTTCAGACTTGTTG+AGG | 0.528521 | 8.4:+18603994 | None:intergenic |
TTCAAAGGGAAATCGTTGGT+TGG | 0.533657 | 8.4:-18603704 | MS.gene044393:CDS |
TTCAACAACTCAATTTATGG+TGG | 0.537634 | 8.4:-18603209 | MS.gene044393:CDS |
TTATAAGCTCTTCATCAGTC+GGG | 0.551669 | 8.4:+18604081 | None:intergenic |
TACAAAGGAAGAGCACCTAA+AGG | 0.552423 | 8.4:-18603659 | MS.gene044393:CDS |
ACAAATGATGAGTGTATCAC+AGG | 0.560386 | 8.4:-18603006 | MS.gene044393:CDS |
TAATCTTCCAAAAGCTGCAA+AGG | 0.563656 | 8.4:-18603579 | MS.gene044393:intron |
TGCATACCACAAACAGAACT+AGG | 0.564682 | 8.4:+18603089 | None:intergenic |
GAATGAATGGGTGATTTGTA+GGG | 0.566421 | 8.4:-18603447 | MS.gene044393:CDS |
GCTGCAACAGAAGCAGGTGG+TGG | 0.576822 | 8.4:+18602888 | None:intergenic |
ACCTCAACAAGTCTGAACCT+TGG | 0.581627 | 8.4:-18603995 | MS.gene044393:CDS |
CAGGGTATTGGAAAGCAACT+GGG | 0.599644 | 8.4:-18603742 | MS.gene044393:CDS |
TATGCATGAATATCGACTTG+AGG | 0.612535 | 8.4:-18603618 | MS.gene044393:CDS |
ATTGATGTTCAAAGAAACCA+AGG | 0.616657 | 8.4:-18603248 | MS.gene044393:CDS |
GAATTCGACGAATCAGTAAG+TGG | 0.627084 | 8.4:+18603329 | None:intergenic |
GTTGAGGTCTACATCACCAA+TGG | 0.634909 | 8.4:+18604010 | None:intergenic |
AGAGCTTTGTATGAAAACAA+CGG | 0.644899 | 8.4:-18603050 | MS.gene044393:CDS |
ATAATGAGGTTGGATTCACT+TGG | 0.646475 | 8.4:-18603380 | MS.gene044393:CDS |
CAAACAGAGCAACAGAAGCA+GGG | 0.648037 | 8.4:-18603760 | MS.gene044393:CDS |
GAGACAGAAAATATCCAACT+GGG | 0.662566 | 8.4:-18603790 | MS.gene044393:CDS |
ATACTCTAATAATCAAGCTG+CGG | 0.664743 | 8.4:-18603126 | MS.gene044393:CDS |
ATGTTCAAAGAAACCAAGGA+GGG | 0.670364 | 8.4:-18603244 | MS.gene044393:CDS |
TTCGACGAATCAGTAAGTGG+TGG | 0.693712 | 8.4:+18603332 | None:intergenic |
ACAGCTGCAACAGAAGCAGG+TGG | 0.707691 | 8.4:+18602885 | None:intergenic |
GATGTTCAAAGAAACCAAGG+AGG | 0.712058 | 8.4:-18603245 | MS.gene044393:CDS |
GGGTGAAATCGAAATCCAGG+AGG | 0.758130 | 8.4:+18604101 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTGTTTTGAAATTTT+GGG | - | chr8.4:18603142-18603161 | MS.gene044393:CDS | 10.0% |
!!! | TTTTTTTTGTTTTGAAATTT+TGG | - | chr8.4:18603141-18603160 | MS.gene044393:CDS | 10.0% |
!!! | AAAGATAAAGAAATTTTCAA+AGG | - | chr8.4:18603287-18603306 | MS.gene044393:CDS | 15.0% |
!!! | AAGATAAAGAAATTTTCAAA+GGG | - | chr8.4:18603288-18603307 | MS.gene044393:CDS | 15.0% |
!! | AAGATTCATATCAAATTCAA+AGG | + | chr8.4:18603103-18603122 | None:intergenic | 20.0% |
!! | AATCAAACAATTGAATGATT+CGG | - | chr8.4:18603709-18603728 | MS.gene044393:CDS | 20.0% |
!! | AATCCAAATTCAAATTCAAA+AGG | + | chr8.4:18603518-18603537 | None:intergenic | 20.0% |
!! | TAAAGGAGAAAAAAGTAATT+GGG | - | chr8.4:18603364-18603383 | MS.gene044393:CDS | 20.0% |
!! | TTTGAATTTGAATTTGGATT+TGG | - | chr8.4:18603518-18603537 | MS.gene044393:intron | 20.0% |
!!! | AATCAATAACCTTTTTGTAA+AGG | + | chr8.4:18602958-18602977 | None:intergenic | 20.0% |
!!! | ATTCAAAAGGCATAAAAAAA+TGG | + | chr8.4:18603505-18603524 | None:intergenic | 20.0% |
!!! | GTTTTAGTTAAAGCAAAAAT+GGG | - | chr8.4:18603164-18603183 | MS.gene044393:CDS | 20.0% |
! | AAAAAGGTGAAAACAAAAAG+TGG | + | chr8.4:18603075-18603094 | None:intergenic | 25.0% |
! | AAAAGGTGAAAACAAAAAGT+GGG | + | chr8.4:18603074-18603093 | None:intergenic | 25.0% |
! | AAATTCAAAGGTGGTAAAAA+AGG | + | chr8.4:18603091-18603110 | None:intergenic | 25.0% |
! | AAGTCATTACCTTTACAAAA+AGG | - | chr8.4:18602946-18602965 | MS.gene044393:CDS | 25.0% |
! | ATTCATATCAAATTCAAAGG+TGG | + | chr8.4:18603100-18603119 | None:intergenic | 25.0% |
! | CTAAAGGAGAAAAAAGTAAT+TGG | - | chr8.4:18603363-18603382 | MS.gene044393:CDS | 25.0% |
! | TCATTCAACAACTCAATTTA+TGG | - | chr8.4:18603794-18603813 | MS.gene044393:CDS | 25.0% |
!! | ATGCCTTTTGAATTTGAATT+TGG | - | chr8.4:18603512-18603531 | MS.gene044393:intron | 25.0% |
!!! | AAAACTCTTGTTTTCTACAA+AGG | - | chr8.4:18603332-18603351 | MS.gene044393:CDS | 25.0% |
!!! | CAAATTTTGATATTGGTAGA+AGG | - | chr8.4:18604071-18604090 | MS.gene044393:CDS | 25.0% |
!!! | CAATTACTTTTTTCTCCTTT+AGG | + | chr8.4:18603365-18603384 | None:intergenic | 25.0% |
!!! | GGTTTTAGTTAAAGCAAAAA+TGG | - | chr8.4:18603163-18603182 | MS.gene044393:CDS | 25.0% |
!!! | GTTGTGTCAAATTTTGATAT+TGG | - | chr8.4:18604064-18604083 | MS.gene044393:CDS | 25.0% |
!!! | TTTGATTGGTTTTACTTACA+TGG | + | chr8.4:18603043-18603062 | None:intergenic | 25.0% |
AAATAAGGAAGATGAGAAGA+TGG | - | chr8.4:18602877-18602896 | MS.gene044393:CDS | 30.0% | |
ATACTCTAATAATCAAGCTG+CGG | - | chr8.4:18603880-18603899 | MS.gene044393:intron | 30.0% | |
ATTGATGTTCAAAGAAACCA+AGG | - | chr8.4:18603758-18603777 | MS.gene044393:CDS | 30.0% | |
CAAAAATGGGAGAAAAAGAA+TGG | - | chr8.4:18603177-18603196 | MS.gene044393:CDS | 30.0% | |
CATTAGAAGATGAACTTCTT+GGG | + | chr8.4:18603853-18603872 | None:intergenic | 30.0% | |
GGGAAAAAAACACATATTTC+TGG | - | chr8.4:18603602-18603621 | MS.gene044393:CDS | 30.0% | |
TCTTTGAACATCAATTGAGT+TGG | + | chr8.4:18603753-18603772 | None:intergenic | 30.0% | |
TTCAACAACTCAATTTATGG+TGG | - | chr8.4:18603797-18603816 | MS.gene044393:CDS | 30.0% | |
! | AATTTTCAAAGGGAAATCGT+TGG | - | chr8.4:18603298-18603317 | MS.gene044393:CDS | 30.0% |
! | AGAGCTTTGTATGAAAACAA+CGG | - | chr8.4:18603956-18603975 | MS.gene044393:intron | 30.0% |
! | ATTGTGTTTTGCAGAATGAA+TGG | - | chr8.4:18603546-18603565 | MS.gene044393:intron | 30.0% |
! | TTGATTTTCATGGTACTTTG+TGG | - | chr8.4:18604143-18604162 | MS.gene044393:CDS | 30.0% |
! | TTGTGTTTTGCAGAATGAAT+GGG | - | chr8.4:18603547-18603566 | MS.gene044393:intron | 30.0% |
!! | CACATATTTCTGGTATAATG+AGG | - | chr8.4:18603612-18603631 | MS.gene044393:CDS | 30.0% |
!! | CGTTTCAGTTTTGTCAAATA+AGG | - | chr8.4:18602862-18602881 | MS.gene044393:CDS | 30.0% |
!! | GATTCACTTGGTAATGAATT+TGG | - | chr8.4:18603638-18603657 | MS.gene044393:CDS | 30.0% |
!! | TATTTCTGGTATAATGAGGT+TGG | - | chr8.4:18603616-18603635 | MS.gene044393:CDS | 30.0% |
ACAAATGATGAGTGTATCAC+AGG | - | chr8.4:18604000-18604019 | MS.gene044393:CDS | 35.0% | |
AGAGACAGAAAATATCCAAC+TGG | - | chr8.4:18603215-18603234 | MS.gene044393:CDS | 35.0% | |
AGTGGGTCTGAAAATTTGAT+TGG | + | chr8.4:18603057-18603076 | None:intergenic | 35.0% | |
ATAATGAGGTTGGATTCACT+TGG | - | chr8.4:18603626-18603645 | MS.gene044393:CDS | 35.0% | |
ATGTTCAAAGAAACCAAGGA+GGG | - | chr8.4:18603762-18603781 | MS.gene044393:CDS | 35.0% | |
CCAAGAAGTTCATCTTCTAA+TGG | - | chr8.4:18603851-18603870 | MS.gene044393:intron | 35.0% | |
CCATTAGAAGATGAACTTCT+TGG | + | chr8.4:18603854-18603873 | None:intergenic | 35.0% | |
CTTATAAGCTCTTCATCAGT+CGG | + | chr8.4:18602929-18602948 | None:intergenic | 35.0% | |
GAGACAGAAAATATCCAACT+GGG | - | chr8.4:18603216-18603235 | MS.gene044393:CDS | 35.0% | |
TAATCTTCCAAAAGCTGCAA+AGG | - | chr8.4:18603427-18603446 | MS.gene044393:CDS | 35.0% | |
TACTTACATGGTAAATCCCA+AGG | + | chr8.4:18603031-18603050 | None:intergenic | 35.0% | |
TTATAAGCTCTTCATCAGTC+GGG | + | chr8.4:18602928-18602947 | None:intergenic | 35.0% | |
! | AAGAATACCTTTGCAGCTTT+TGG | + | chr8.4:18603437-18603456 | None:intergenic | 35.0% |
! | AGAATGAATGGGTGATTTGT+AGG | - | chr8.4:18603558-18603577 | MS.gene044393:intron | 35.0% |
! | GAATGAATGGGTGATTTGTA+GGG | - | chr8.4:18603559-18603578 | MS.gene044393:intron | 35.0% |
!! | ATGCATGAATATCGACTTGA+GGG | - | chr8.4:18603389-18603408 | MS.gene044393:CDS | 35.0% |
!! | CAATATCCTAGTTCTGTTTG+TGG | - | chr8.4:18603911-18603930 | MS.gene044393:intron | 35.0% |
!! | TATGCATGAATATCGACTTG+AGG | - | chr8.4:18603388-18603407 | MS.gene044393:CDS | 35.0% |
!! | TTTTTCAGAAGAGTTCAGCT+GGG | - | chr8.4:18603582-18603601 | MS.gene044393:CDS | 35.0% |
AATTTCTCTGCAAGAGCCAT+TGG | - | chr8.4:18602980-18602999 | MS.gene044393:CDS | 40.0% | |
ATGAATCAAAGATCCCTCCT+TGG | + | chr8.4:18603778-18603797 | None:intergenic | 40.0% | |
GAAAATATCCAACTGGGTTG+AGG | - | chr8.4:18603222-18603241 | MS.gene044393:CDS | 40.0% | |
GAATTCGACGAATCAGTAAG+TGG | + | chr8.4:18603680-18603699 | None:intergenic | 40.0% | |
GATGAGTGTATCACAGGAAA+CGG | - | chr8.4:18604006-18604025 | MS.gene044393:CDS | 40.0% | |
GATGTTCAAAGAAACCAAGG+AGG | - | chr8.4:18603761-18603780 | MS.gene044393:CDS | 40.0% | |
TGCATACCACAAACAGAACT+AGG | + | chr8.4:18603920-18603939 | None:intergenic | 40.0% | |
TTCAAAGGGAAATCGTTGGT+TGG | - | chr8.4:18603302-18603321 | MS.gene044393:CDS | 40.0% | |
! | CTGATTCGTCGAATTCGATT+GGG | - | chr8.4:18603684-18603703 | MS.gene044393:CDS | 40.0% |
!! | ACTGATTCGTCGAATTCGAT+TGG | - | chr8.4:18603683-18603702 | MS.gene044393:CDS | 40.0% |
!! | ATCAATTGAGTTGGAGAAGC+AGG | + | chr8.4:18603744-18603763 | None:intergenic | 40.0% |
!! | GTTTTTCAGAAGAGTTCAGC+TGG | - | chr8.4:18603581-18603600 | MS.gene044393:CDS | 40.0% |
!! | TACAAAGGAAGAGCACCTAA+AGG | - | chr8.4:18603347-18603366 | MS.gene044393:CDS | 40.0% |
!!! | GTTGCAGCTGTTGATTTTCA+TGG | - | chr8.4:18604133-18604152 | MS.gene044393:CDS | 40.0% |
ACAAACAGAGCAACAGAAGC+AGG | - | chr8.4:18603245-18603264 | MS.gene044393:CDS | 45.0% | |
ACCTCAACAAGTCTGAACCT+TGG | - | chr8.4:18603011-18603030 | MS.gene044393:CDS | 45.0% | |
CAAACAGAGCAACAGAAGCA+GGG | - | chr8.4:18603246-18603265 | MS.gene044393:CDS | 45.0% | |
CCTCAACAAGTCTGAACCTT+GGG | - | chr8.4:18603012-18603031 | MS.gene044393:CDS | 45.0% | |
GTTGAGGTCTACATCACCAA+TGG | + | chr8.4:18602999-18603018 | None:intergenic | 45.0% | |
TTCGACGAATCAGTAAGTGG+TGG | + | chr8.4:18603677-18603696 | None:intergenic | 45.0% | |
!! | CAGGGTATTGGAAAGCAACT+GGG | - | chr8.4:18603264-18603283 | MS.gene044393:CDS | 45.0% |
CTGTTTGTCCTCAACCCAGT+TGG | + | chr8.4:18603233-18603252 | None:intergenic | 50.0% | |
GAGCAACAGAAGCAGGGTAT+TGG | - | chr8.4:18603252-18603271 | MS.gene044393:CDS | 50.0% | |
GGGTGAAATCGAAATCCAGG+AGG | + | chr8.4:18602908-18602927 | None:intergenic | 50.0% | |
GTCGGGTGAAATCGAAATCC+AGG | + | chr8.4:18602911-18602930 | None:intergenic | 50.0% | |
TCAACAGCTGCAACAGAAGC+AGG | + | chr8.4:18604127-18604146 | None:intergenic | 50.0% | |
! | GAGAAGATGGATTTGCCTCC+TGG | - | chr8.4:18602890-18602909 | MS.gene044393:CDS | 50.0% |
!! | CCCAAGGTTCAGACTTGTTG+AGG | + | chr8.4:18603015-18603034 | None:intergenic | 50.0% |
!! | GCAGGGTATTGGAAAGCAAC+TGG | - | chr8.4:18603263-18603282 | MS.gene044393:CDS | 50.0% |
ACAGCTGCAACAGAAGCAGG+TGG | + | chr8.4:18604124-18604143 | None:intergenic | 55.0% | |
GCTGCAACAGAAGCAGGTGG+TGG | + | chr8.4:18604121-18604140 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 18602854 | 18604174 | 18602854 | ID=MS.gene044393 |
chr8.4 | mRNA | 18602854 | 18604174 | 18602854 | ID=MS.gene044393.t1;Parent=MS.gene044393 |
chr8.4 | exon | 18603985 | 18604174 | 18603985 | ID=MS.gene044393.t1.exon1;Parent=MS.gene044393.t1 |
chr8.4 | CDS | 18603985 | 18604174 | 18603985 | ID=cds.MS.gene044393.t1;Parent=MS.gene044393.t1 |
chr8.4 | exon | 18603580 | 18603857 | 18603580 | ID=MS.gene044393.t1.exon2;Parent=MS.gene044393.t1 |
chr8.4 | CDS | 18603580 | 18603857 | 18603580 | ID=cds.MS.gene044393.t1;Parent=MS.gene044393.t1 |
chr8.4 | exon | 18602854 | 18603468 | 18602854 | ID=MS.gene044393.t1.exon3;Parent=MS.gene044393.t1 |
chr8.4 | CDS | 18602854 | 18603468 | 18602854 | ID=cds.MS.gene044393.t1;Parent=MS.gene044393.t1 |
Gene Sequence |
Protein sequence |