Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58420.t1 | XP_013457910.1 | 95 | 360 | 7 | 2 | 1 | 350 | 1 | 359 | 1.40E-194 | 688.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58420.t1 | Q9FLJ2 | 57.3 | 351 | 117 | 10 | 10 | 350 | 9 | 336 | 6.2e-103 | 375.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58420.t1 | A0A072URG4 | 95.0 | 360 | 7 | 2 | 1 | 350 | 1 | 359 | 1.0e-194 | 688.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene58420.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049283 | MS.gene58420 | 0.812318 | 4.50E-51 | -1.69E-46 |
MS.gene052533 | MS.gene58420 | 0.819533 | 1.10E-52 | -1.69E-46 |
MS.gene054892 | MS.gene58420 | 0.813442 | 2.55E-51 | -1.69E-46 |
MS.gene054893 | MS.gene58420 | 0.817145 | 3.84E-52 | -1.69E-46 |
MS.gene055150 | MS.gene58420 | 0.812708 | 3.70E-51 | -1.69E-46 |
MS.gene055229 | MS.gene58420 | 0.842832 | 2.03E-58 | -1.69E-46 |
MS.gene056677 | MS.gene58420 | 0.823555 | 1.30E-53 | -1.69E-46 |
MS.gene057102 | MS.gene58420 | 0.80196 | 7.04E-49 | -1.69E-46 |
MS.gene05952 | MS.gene58420 | 0.819075 | 1.40E-52 | -1.69E-46 |
MS.gene05985 | MS.gene58420 | -0.837311 | 5.60E-57 | -1.69E-46 |
MS.gene060522 | MS.gene58420 | 0.809647 | 1.71E-50 | -1.69E-46 |
MS.gene060937 | MS.gene58420 | 0.806126 | 9.57E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene061729 | MS.gene58420 | PPI |
MS.gene044393 | MS.gene58420 | PPI |
MS.gene033113 | MS.gene58420 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58420.t1 | MTR_4g108760 | 95.000 | 360 | 7 | 2 | 1 | 350 | 1 | 359 | 0.0 | 704 |
MS.gene58420.t1 | MTR_3g435150 | 66.250 | 320 | 79 | 8 | 1 | 309 | 1 | 302 | 2.20e-132 | 380 |
MS.gene58420.t1 | MTR_6g012670 | 59.426 | 244 | 78 | 5 | 12 | 238 | 15 | 254 | 1.14e-94 | 285 |
MS.gene58420.t1 | MTR_6g032770 | 47.514 | 362 | 136 | 12 | 2 | 323 | 3 | 350 | 2.29e-93 | 283 |
MS.gene58420.t1 | MTR_7g085260 | 43.434 | 396 | 165 | 13 | 1 | 350 | 1 | 383 | 2.73e-89 | 273 |
MS.gene58420.t1 | MTR_3g070030 | 45.401 | 337 | 153 | 8 | 11 | 330 | 13 | 335 | 3.57e-80 | 249 |
MS.gene58420.t1 | MTR_2g078700 | 80.282 | 142 | 26 | 1 | 17 | 156 | 23 | 164 | 1.07e-79 | 248 |
MS.gene58420.t1 | MTR_6g084430 | 63.590 | 195 | 56 | 3 | 16 | 195 | 4 | 198 | 1.44e-79 | 246 |
MS.gene58420.t1 | MTR_7g011130 | 50.000 | 266 | 101 | 5 | 11 | 244 | 13 | 278 | 6.16e-73 | 230 |
MS.gene58420.t1 | MTR_7g011120 | 75.352 | 142 | 34 | 1 | 11 | 151 | 2 | 143 | 2.75e-72 | 227 |
MS.gene58420.t1 | MTR_1g008740 | 66.061 | 165 | 45 | 4 | 9 | 163 | 6 | 169 | 3.78e-71 | 225 |
MS.gene58420.t1 | MTR_1g008740 | 66.061 | 165 | 45 | 4 | 9 | 163 | 20 | 183 | 7.72e-71 | 225 |
MS.gene58420.t1 | MTR_3g109340 | 62.353 | 170 | 56 | 2 | 2 | 163 | 7 | 176 | 5.23e-70 | 223 |
MS.gene58420.t1 | MTR_3g109340 | 61.988 | 171 | 56 | 2 | 2 | 163 | 7 | 177 | 7.92e-70 | 222 |
MS.gene58420.t1 | MTR_3g070040 | 40.782 | 358 | 170 | 12 | 11 | 350 | 2 | 335 | 3.52e-65 | 209 |
MS.gene58420.t1 | MTR_3g116070 | 62.195 | 164 | 57 | 4 | 2 | 160 | 7 | 170 | 5.16e-63 | 204 |
MS.gene58420.t1 | MTR_2g064470 | 42.414 | 290 | 129 | 9 | 1 | 281 | 1 | 261 | 2.88e-60 | 196 |
MS.gene58420.t1 | MTR_4g036030 | 62.308 | 130 | 46 | 1 | 17 | 143 | 7 | 136 | 3.34e-55 | 184 |
MS.gene58420.t1 | MTR_4g101680 | 64.615 | 130 | 43 | 1 | 17 | 143 | 7 | 136 | 4.11e-55 | 184 |
MS.gene58420.t1 | MTR_5g012080 | 62.595 | 131 | 45 | 2 | 17 | 143 | 7 | 137 | 3.21e-54 | 182 |
MS.gene58420.t1 | MTR_5g041940 | 61.538 | 130 | 50 | 0 | 15 | 144 | 1 | 130 | 4.01e-54 | 179 |
MS.gene58420.t1 | MTR_4g035590 | 64.615 | 130 | 43 | 1 | 17 | 143 | 8 | 137 | 8.27e-54 | 181 |
MS.gene58420.t1 | MTR_5g021710 | 59.231 | 130 | 50 | 1 | 17 | 143 | 8 | 137 | 1.37e-53 | 180 |
MS.gene58420.t1 | MTR_8g076110 | 56.835 | 139 | 54 | 2 | 17 | 152 | 6 | 141 | 1.69e-53 | 179 |
MS.gene58420.t1 | MTR_4g081870 | 42.857 | 238 | 113 | 6 | 16 | 253 | 8 | 222 | 2.08e-53 | 177 |
MS.gene58420.t1 | MTR_2g064090 | 62.308 | 130 | 47 | 1 | 15 | 142 | 4 | 133 | 2.24e-53 | 179 |
MS.gene58420.t1 | MTR_7g085220 | 59.420 | 138 | 47 | 2 | 14 | 142 | 5 | 142 | 4.70e-53 | 178 |
MS.gene58420.t1 | MTR_2157s0010 | 54.375 | 160 | 61 | 2 | 17 | 173 | 8 | 158 | 6.37e-53 | 176 |
MS.gene58420.t1 | MTR_8g024480 | 57.241 | 145 | 56 | 2 | 2 | 143 | 3 | 144 | 7.77e-53 | 180 |
MS.gene58420.t1 | MTR_7g100990 | 54.321 | 162 | 58 | 2 | 14 | 173 | 8 | 155 | 9.27e-53 | 177 |
MS.gene58420.t1 | MTR_1g069805 | 58.915 | 129 | 51 | 1 | 17 | 143 | 10 | 138 | 1.44e-52 | 175 |
MS.gene58420.t1 | MTR_2g080010 | 59.091 | 132 | 52 | 1 | 13 | 142 | 11 | 142 | 1.73e-52 | 177 |
MS.gene58420.t1 | MTR_3g088110 | 62.016 | 129 | 48 | 1 | 14 | 142 | 4 | 131 | 2.45e-52 | 175 |
MS.gene58420.t1 | MTR_4g089135 | 52.174 | 161 | 75 | 1 | 17 | 175 | 15 | 175 | 3.08e-52 | 176 |
MS.gene58420.t1 | MTR_2g079990 | 61.240 | 129 | 50 | 0 | 14 | 142 | 13 | 141 | 1.83e-51 | 174 |
MS.gene58420.t1 | MTR_7g097090 | 58.140 | 129 | 52 | 1 | 17 | 143 | 10 | 138 | 3.72e-51 | 172 |
MS.gene58420.t1 | MTR_2g079990 | 61.240 | 129 | 50 | 0 | 14 | 142 | 13 | 141 | 3.75e-51 | 174 |
MS.gene58420.t1 | MTR_8g059170 | 59.420 | 138 | 56 | 0 | 14 | 151 | 11 | 148 | 4.25e-51 | 173 |
MS.gene58420.t1 | MTR_2g062730 | 58.955 | 134 | 51 | 2 | 14 | 143 | 7 | 140 | 4.48e-51 | 173 |
MS.gene58420.t1 | MTR_8g094580 | 49.735 | 189 | 70 | 5 | 15 | 203 | 5 | 168 | 7.56e-51 | 171 |
MS.gene58420.t1 | MTR_3g096920 | 49.474 | 190 | 70 | 5 | 14 | 203 | 4 | 167 | 1.85e-50 | 170 |
MS.gene58420.t1 | MTR_6g477900 | 58.015 | 131 | 53 | 1 | 17 | 145 | 6 | 136 | 4.11e-50 | 167 |
MS.gene58420.t1 | MTR_3g064580 | 60.150 | 133 | 51 | 1 | 15 | 145 | 4 | 136 | 7.33e-50 | 177 |
MS.gene58420.t1 | MTR_5g076850 | 58.647 | 133 | 53 | 1 | 15 | 145 | 4 | 136 | 7.35e-50 | 176 |
MS.gene58420.t1 | MTR_1g096430 | 54.610 | 141 | 59 | 2 | 17 | 154 | 7 | 145 | 7.80e-50 | 170 |
MS.gene58420.t1 | MTR_3g096920 | 54.902 | 153 | 57 | 2 | 14 | 166 | 4 | 144 | 9.67e-50 | 169 |
MS.gene58420.t1 | MTR_5g014300 | 46.809 | 188 | 77 | 5 | 17 | 181 | 6 | 193 | 1.63e-49 | 169 |
MS.gene58420.t1 | MTR_2g093810 | 50.314 | 159 | 63 | 2 | 17 | 173 | 14 | 158 | 1.66e-48 | 166 |
MS.gene58420.t1 | MTR_8g467490 | 46.409 | 181 | 91 | 3 | 19 | 193 | 16 | 196 | 1.28e-47 | 166 |
MS.gene58420.t1 | MTR_6g011860 | 53.957 | 139 | 63 | 1 | 16 | 153 | 14 | 152 | 3.49e-47 | 164 |
MS.gene58420.t1 | MTR_5g040420 | 57.463 | 134 | 53 | 2 | 13 | 142 | 8 | 141 | 4.35e-47 | 164 |
MS.gene58420.t1 | MTR_7g005280 | 55.556 | 135 | 55 | 2 | 10 | 142 | 8 | 139 | 1.00e-46 | 159 |
MS.gene58420.t1 | MTR_4g098630 | 47.059 | 170 | 77 | 3 | 13 | 169 | 2 | 171 | 1.27e-46 | 161 |
MS.gene58420.t1 | MTR_3g093050 | 59.843 | 127 | 49 | 1 | 17 | 141 | 22 | 148 | 6.35e-46 | 165 |
MS.gene58420.t1 | MTR_3g093050 | 59.843 | 127 | 49 | 1 | 17 | 141 | 22 | 148 | 7.75e-46 | 165 |
MS.gene58420.t1 | MTR_5g069030 | 56.643 | 143 | 53 | 3 | 2 | 141 | 15 | 151 | 1.32e-45 | 165 |
MS.gene58420.t1 | MTR_3g093040 | 56.589 | 129 | 54 | 1 | 15 | 141 | 106 | 234 | 3.71e-45 | 157 |
MS.gene58420.t1 | MTR_3g096140 | 54.264 | 129 | 57 | 1 | 19 | 145 | 9 | 137 | 2.74e-44 | 154 |
MS.gene58420.t1 | MTR_1g097300 | 53.383 | 133 | 60 | 1 | 13 | 143 | 15 | 147 | 1.24e-43 | 158 |
MS.gene58420.t1 | MTR_3g096140 | 54.264 | 129 | 57 | 1 | 19 | 145 | 9 | 137 | 1.99e-43 | 154 |
MS.gene58420.t1 | MTR_2g086880 | 56.098 | 123 | 53 | 1 | 19 | 140 | 20 | 142 | 3.32e-43 | 156 |
MS.gene58420.t1 | MTR_1g090723 | 47.222 | 180 | 80 | 5 | 19 | 185 | 10 | 187 | 3.81e-43 | 157 |
MS.gene58420.t1 | MTR_2g086880 | 56.098 | 123 | 53 | 1 | 19 | 140 | 20 | 142 | 4.39e-43 | 157 |
MS.gene58420.t1 | MTR_1g090723 | 47.222 | 180 | 80 | 5 | 19 | 185 | 10 | 187 | 4.84e-43 | 157 |
MS.gene58420.t1 | MTR_5g090970 | 48.980 | 147 | 70 | 2 | 4 | 145 | 3 | 149 | 6.61e-43 | 151 |
MS.gene58420.t1 | MTR_1g090723 | 56.589 | 129 | 49 | 3 | 19 | 142 | 10 | 136 | 1.87e-42 | 156 |
MS.gene58420.t1 | MTR_8g063550 | 51.908 | 131 | 61 | 1 | 17 | 145 | 6 | 136 | 4.43e-42 | 149 |
MS.gene58420.t1 | MTR_4g134460 | 54.688 | 128 | 51 | 2 | 19 | 142 | 56 | 180 | 4.82e-42 | 152 |
MS.gene58420.t1 | MTR_1g090720 | 57.143 | 126 | 52 | 1 | 17 | 140 | 42 | 167 | 5.06e-42 | 152 |
MS.gene58420.t1 | MTR_0036s0150 | 50.955 | 157 | 63 | 4 | 19 | 163 | 7 | 161 | 5.99e-42 | 153 |
MS.gene58420.t1 | MTR_8g063550 | 51.908 | 131 | 61 | 1 | 17 | 145 | 6 | 136 | 7.23e-42 | 151 |
MS.gene58420.t1 | MTR_5g090970 | 48.980 | 147 | 69 | 3 | 4 | 145 | 3 | 148 | 9.99e-42 | 148 |
MS.gene58420.t1 | MTR_8g063550 | 51.908 | 131 | 61 | 1 | 17 | 145 | 6 | 136 | 1.58e-41 | 150 |
MS.gene58420.t1 | MTR_4g075980 | 48.276 | 145 | 67 | 3 | 1 | 142 | 4 | 143 | 5.32e-41 | 145 |
MS.gene58420.t1 | MTR_2g068880 | 49.324 | 148 | 65 | 4 | 1 | 142 | 9 | 152 | 3.98e-40 | 144 |
MS.gene58420.t1 | MTR_8g093580 | 49.618 | 131 | 64 | 1 | 17 | 145 | 6 | 136 | 5.70e-40 | 147 |
MS.gene58420.t1 | MTR_2g068920 | 51.880 | 133 | 58 | 3 | 16 | 142 | 19 | 151 | 1.63e-39 | 141 |
MS.gene58420.t1 | MTR_8g023840 | 51.079 | 139 | 62 | 5 | 7 | 140 | 1 | 138 | 7.94e-38 | 140 |
MS.gene58420.t1 | MTR_8g099750 | 46.875 | 128 | 64 | 2 | 17 | 142 | 14 | 139 | 9.05e-36 | 130 |
MS.gene58420.t1 | MTR_3g098810 | 43.836 | 146 | 73 | 3 | 1 | 142 | 1 | 141 | 1.87e-34 | 125 |
MS.gene58420.t1 | MTR_3g096140 | 51.304 | 115 | 54 | 1 | 33 | 145 | 2 | 116 | 5.28e-34 | 128 |
MS.gene58420.t1 | MTR_3g098810 | 46.923 | 130 | 63 | 2 | 17 | 142 | 14 | 141 | 7.31e-34 | 125 |
MS.gene58420.t1 | MTR_8g023860 | 49.231 | 130 | 60 | 5 | 17 | 141 | 12 | 140 | 2.87e-33 | 128 |
MS.gene58420.t1 | MTR_4g052620 | 45.038 | 131 | 66 | 3 | 17 | 141 | 5 | 135 | 8.45e-31 | 117 |
MS.gene58420.t1 | MTR_8g094580 | 50.000 | 138 | 44 | 5 | 66 | 203 | 2 | 114 | 2.70e-30 | 115 |
MS.gene58420.t1 | MTR_2g086690 | 38.272 | 162 | 91 | 4 | 16 | 168 | 3 | 164 | 9.50e-30 | 114 |
MS.gene58420.t1 | MTR_8g023900 | 45.736 | 129 | 64 | 5 | 17 | 140 | 12 | 139 | 1.61e-28 | 115 |
MS.gene58420.t1 | MTR_8g023900 | 42.537 | 134 | 66 | 6 | 17 | 140 | 188 | 320 | 9.66e-27 | 110 |
MS.gene58420.t1 | MTR_8g023880 | 47.222 | 144 | 54 | 7 | 17 | 141 | 7 | 147 | 2.16e-28 | 111 |
MS.gene58420.t1 | MTR_8g023930 | 43.411 | 129 | 67 | 5 | 17 | 140 | 24 | 151 | 1.88e-27 | 112 |
MS.gene58420.t1 | MTR_4g094302 | 41.406 | 128 | 65 | 2 | 17 | 142 | 11 | 130 | 2.25e-27 | 105 |
MS.gene58420.t1 | MTR_4g094302 | 41.406 | 128 | 65 | 2 | 17 | 142 | 11 | 130 | 6.18e-27 | 105 |
MS.gene58420.t1 | MTR_7g105170 | 40.602 | 133 | 72 | 4 | 16 | 141 | 3 | 135 | 2.26e-26 | 105 |
MS.gene58420.t1 | MTR_7g070140 | 51.250 | 80 | 37 | 1 | 70 | 147 | 17 | 96 | 1.16e-22 | 92.4 |
MS.gene58420.t1 | MTR_8g093790 | 42.857 | 126 | 56 | 4 | 17 | 142 | 10 | 119 | 2.79e-21 | 90.1 |
MS.gene58420.t1 | MTR_3g096400 | 40.441 | 136 | 65 | 6 | 13 | 142 | 3 | 128 | 8.25e-19 | 84.0 |
MS.gene58420.t1 | MTR_7g083360 | 32.308 | 130 | 82 | 5 | 14 | 140 | 7 | 133 | 4.72e-17 | 77.8 |
MS.gene58420.t1 | MTR_7g083330 | 31.818 | 132 | 84 | 5 | 12 | 140 | 13 | 141 | 2.87e-15 | 73.9 |
MS.gene58420.t1 | MTR_7g083370 | 30.769 | 130 | 80 | 5 | 16 | 140 | 9 | 133 | 6.35e-15 | 71.6 |
MS.gene58420.t1 | MTR_8g102240 | 32.237 | 152 | 77 | 5 | 15 | 142 | 45 | 194 | 6.08e-11 | 63.9 |
MS.gene58420.t1 | MTR_8g102240 | 32.237 | 152 | 77 | 5 | 15 | 142 | 45 | 194 | 6.09e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58420.t1 | AT5G61430 | 57.746 | 355 | 109 | 12 | 10 | 350 | 9 | 336 | 9.65e-134 | 385 |
MS.gene58420.t1 | AT5G07680 | 54.270 | 363 | 119 | 14 | 1 | 350 | 1 | 329 | 1.37e-120 | 351 |
MS.gene58420.t1 | AT5G07680 | 55.043 | 347 | 113 | 14 | 15 | 350 | 1 | 315 | 1.17e-116 | 340 |
MS.gene58420.t1 | AT5G61430 | 53.846 | 299 | 97 | 12 | 66 | 350 | 2 | 273 | 8.41e-95 | 283 |
MS.gene58420.t1 | AT3G29035 | 60.081 | 248 | 78 | 5 | 10 | 248 | 17 | 252 | 1.87e-93 | 281 |
MS.gene58420.t1 | AT5G39610 | 66.038 | 212 | 56 | 3 | 10 | 211 | 13 | 218 | 4.30e-92 | 277 |
MS.gene58420.t1 | AT5G18270 | 46.567 | 335 | 107 | 8 | 1 | 310 | 5 | 292 | 3.79e-88 | 268 |
MS.gene58420.t1 | AT5G18270 | 46.269 | 335 | 108 | 8 | 1 | 310 | 5 | 292 | 1.25e-87 | 267 |
MS.gene58420.t1 | AT3G04060 | 45.833 | 336 | 131 | 7 | 4 | 321 | 7 | 309 | 1.25e-82 | 254 |
MS.gene58420.t1 | AT3G15170 | 63.107 | 206 | 70 | 4 | 11 | 211 | 15 | 219 | 2.00e-82 | 253 |
MS.gene58420.t1 | AT5G53950 | 80.282 | 142 | 26 | 1 | 17 | 156 | 17 | 158 | 3.43e-80 | 249 |
MS.gene58420.t1 | AT3G18400 | 55.702 | 228 | 88 | 5 | 16 | 234 | 4 | 227 | 3.48e-77 | 240 |
MS.gene58420.t1 | AT2G24430 | 74.286 | 140 | 32 | 2 | 10 | 147 | 11 | 148 | 1.01e-70 | 223 |
MS.gene58420.t1 | AT2G24430 | 74.286 | 140 | 32 | 2 | 10 | 147 | 11 | 148 | 1.01e-70 | 223 |
MS.gene58420.t1 | AT1G76420 | 67.123 | 146 | 46 | 1 | 4 | 147 | 9 | 154 | 2.92e-65 | 210 |
MS.gene58420.t1 | AT3G12977 | 38.127 | 299 | 129 | 5 | 16 | 305 | 17 | 268 | 7.52e-59 | 191 |
MS.gene58420.t1 | AT1G56010 | 40.071 | 282 | 136 | 10 | 17 | 281 | 19 | 284 | 6.41e-58 | 191 |
MS.gene58420.t1 | AT1G12260 | 63.846 | 130 | 44 | 1 | 17 | 143 | 7 | 136 | 2.19e-55 | 184 |
MS.gene58420.t1 | AT1G12260 | 63.846 | 130 | 44 | 1 | 17 | 143 | 7 | 136 | 2.61e-55 | 186 |
MS.gene58420.t1 | AT3G04070 | 58.333 | 156 | 56 | 3 | 11 | 161 | 4 | 155 | 2.70e-55 | 184 |
MS.gene58420.t1 | AT3G04070 | 58.333 | 156 | 56 | 3 | 11 | 161 | 4 | 155 | 4.12e-55 | 184 |
MS.gene58420.t1 | AT4G27410 | 63.566 | 129 | 47 | 0 | 14 | 142 | 11 | 139 | 1.55e-54 | 181 |
MS.gene58420.t1 | AT1G62700 | 63.846 | 130 | 44 | 1 | 17 | 143 | 7 | 136 | 4.66e-54 | 182 |
MS.gene58420.t1 | AT1G62700 | 63.846 | 130 | 44 | 1 | 17 | 143 | 7 | 136 | 4.66e-54 | 182 |
MS.gene58420.t1 | AT4G10350 | 63.077 | 130 | 45 | 1 | 17 | 143 | 9 | 138 | 4.91e-54 | 181 |
MS.gene58420.t1 | AT2G18060 | 58.955 | 134 | 52 | 1 | 13 | 143 | 5 | 138 | 7.23e-54 | 181 |
MS.gene58420.t1 | AT2G18060 | 58.955 | 134 | 52 | 1 | 13 | 143 | 5 | 138 | 7.23e-54 | 181 |
MS.gene58420.t1 | AT4G36160 | 58.519 | 135 | 53 | 1 | 12 | 143 | 5 | 139 | 9.42e-54 | 181 |
MS.gene58420.t1 | AT4G36160 | 58.519 | 135 | 53 | 1 | 12 | 143 | 5 | 139 | 9.42e-54 | 181 |
MS.gene58420.t1 | AT4G36160 | 58.519 | 135 | 53 | 1 | 12 | 143 | 9 | 143 | 9.96e-54 | 181 |
MS.gene58420.t1 | AT1G33280 | 61.538 | 130 | 47 | 1 | 17 | 143 | 8 | 137 | 6.04e-53 | 177 |
MS.gene58420.t1 | AT5G62380 | 61.538 | 130 | 47 | 1 | 17 | 143 | 7 | 136 | 8.68e-53 | 178 |
MS.gene58420.t1 | AT5G62380 | 61.538 | 130 | 47 | 1 | 17 | 143 | 7 | 136 | 8.68e-53 | 178 |
MS.gene58420.t1 | AT1G71930 | 57.692 | 130 | 52 | 1 | 17 | 143 | 9 | 138 | 2.38e-52 | 176 |
MS.gene58420.t1 | AT1G71930 | 57.692 | 130 | 52 | 1 | 17 | 143 | 9 | 138 | 2.38e-52 | 176 |
MS.gene58420.t1 | AT4G35580 | 62.992 | 127 | 45 | 1 | 17 | 141 | 9 | 135 | 3.31e-52 | 181 |
MS.gene58420.t1 | AT2G46770 | 60.769 | 130 | 48 | 1 | 17 | 143 | 16 | 145 | 3.56e-52 | 177 |
MS.gene58420.t1 | AT4G35580 | 62.992 | 127 | 45 | 1 | 17 | 141 | 9 | 135 | 4.43e-52 | 181 |
MS.gene58420.t1 | AT4G35580 | 62.992 | 127 | 45 | 1 | 17 | 141 | 9 | 135 | 4.58e-52 | 181 |
MS.gene58420.t1 | AT1G01720 | 61.538 | 130 | 49 | 1 | 13 | 142 | 3 | 131 | 7.51e-52 | 174 |
MS.gene58420.t1 | AT3G61910 | 57.692 | 130 | 52 | 1 | 17 | 143 | 11 | 140 | 1.46e-51 | 174 |
MS.gene58420.t1 | AT5G66300 | 56.391 | 133 | 55 | 1 | 11 | 140 | 6 | 138 | 1.86e-51 | 173 |
MS.gene58420.t1 | AT1G69490 | 54.777 | 157 | 57 | 2 | 17 | 173 | 9 | 151 | 2.03e-51 | 172 |
MS.gene58420.t1 | AT3G10500 | 55.414 | 157 | 60 | 3 | 17 | 163 | 9 | 165 | 2.71e-51 | 179 |
MS.gene58420.t1 | AT1G33060 | 60.305 | 131 | 50 | 1 | 17 | 145 | 24 | 154 | 2.78e-51 | 181 |
MS.gene58420.t1 | AT1G33060 | 60.305 | 131 | 50 | 1 | 17 | 145 | 24 | 154 | 3.08e-51 | 180 |
MS.gene58420.t1 | AT5G04410 | 63.281 | 128 | 45 | 1 | 17 | 142 | 9 | 136 | 6.19e-51 | 178 |
MS.gene58420.t1 | AT5G46590 | 60.465 | 129 | 48 | 2 | 17 | 142 | 6 | 134 | 6.24e-51 | 171 |
MS.gene58420.t1 | AT1G61110 | 59.574 | 141 | 52 | 2 | 17 | 156 | 16 | 152 | 8.74e-51 | 172 |
MS.gene58420.t1 | AT5G46590 | 60.465 | 129 | 48 | 2 | 17 | 142 | 6 | 134 | 9.19e-51 | 171 |
MS.gene58420.t1 | AT3G17730 | 58.779 | 131 | 52 | 1 | 17 | 145 | 6 | 136 | 1.08e-50 | 169 |
MS.gene58420.t1 | AT3G15500 | 60.465 | 129 | 51 | 0 | 14 | 142 | 11 | 139 | 1.68e-50 | 171 |
MS.gene58420.t1 | AT4G27410 | 56.164 | 146 | 47 | 1 | 14 | 142 | 11 | 156 | 3.52e-50 | 170 |
MS.gene58420.t1 | AT1G52890 | 60.465 | 129 | 51 | 0 | 14 | 142 | 11 | 139 | 3.69e-50 | 170 |
MS.gene58420.t1 | AT5G08790 | 61.240 | 129 | 49 | 1 | 14 | 142 | 4 | 131 | 5.40e-50 | 169 |
MS.gene58420.t1 | AT1G65910 | 52.201 | 159 | 66 | 2 | 15 | 163 | 4 | 162 | 9.18e-50 | 176 |
MS.gene58420.t1 | AT1G32770 | 58.462 | 130 | 51 | 1 | 17 | 143 | 16 | 145 | 1.43e-49 | 170 |
MS.gene58420.t1 | AT3G03200 | 59.542 | 131 | 51 | 1 | 15 | 143 | 4 | 134 | 1.90e-49 | 172 |
MS.gene58420.t1 | AT1G77450 | 58.647 | 133 | 54 | 1 | 10 | 142 | 3 | 134 | 3.45e-49 | 166 |
MS.gene58420.t1 | AT3G10480 | 61.719 | 128 | 47 | 1 | 17 | 142 | 27 | 154 | 4.82e-49 | 171 |
MS.gene58420.t1 | AT3G10480 | 61.719 | 128 | 47 | 1 | 17 | 142 | 27 | 154 | 4.87e-49 | 171 |
MS.gene58420.t1 | AT3G10490 | 60.156 | 128 | 49 | 1 | 17 | 142 | 27 | 154 | 7.84e-49 | 164 |
MS.gene58420.t1 | AT5G17260 | 58.779 | 131 | 52 | 1 | 15 | 143 | 4 | 134 | 1.37e-48 | 170 |
MS.gene58420.t1 | AT5G63790 | 58.647 | 133 | 54 | 1 | 10 | 142 | 43 | 174 | 2.58e-48 | 165 |
MS.gene58420.t1 | AT5G63790 | 58.647 | 133 | 54 | 1 | 10 | 142 | 53 | 184 | 2.82e-48 | 166 |
MS.gene58420.t1 | AT1G54330 | 61.538 | 130 | 48 | 1 | 15 | 142 | 4 | 133 | 3.30e-48 | 164 |
MS.gene58420.t1 | AT1G79580 | 57.463 | 134 | 53 | 2 | 14 | 143 | 14 | 147 | 5.56e-48 | 166 |
MS.gene58420.t1 | AT1G79580 | 57.463 | 134 | 53 | 2 | 14 | 143 | 14 | 147 | 5.56e-48 | 166 |
MS.gene58420.t1 | AT1G79580 | 57.463 | 134 | 53 | 2 | 14 | 143 | 14 | 147 | 5.56e-48 | 166 |
MS.gene58420.t1 | AT1G79580 | 57.463 | 134 | 53 | 2 | 14 | 143 | 14 | 147 | 5.56e-48 | 166 |
MS.gene58420.t1 | AT1G79580 | 57.463 | 134 | 53 | 2 | 14 | 143 | 14 | 147 | 5.56e-48 | 166 |
MS.gene58420.t1 | AT2G33480 | 56.338 | 142 | 57 | 2 | 1 | 142 | 1 | 137 | 1.11e-47 | 162 |
MS.gene58420.t1 | AT2G33480 | 56.338 | 142 | 57 | 2 | 1 | 142 | 1 | 137 | 1.12e-47 | 162 |
MS.gene58420.t1 | AT3G10490 | 60.156 | 128 | 49 | 1 | 17 | 142 | 27 | 154 | 1.18e-47 | 167 |
MS.gene58420.t1 | AT3G15510 | 59.677 | 124 | 48 | 1 | 21 | 142 | 21 | 144 | 2.09e-47 | 164 |
MS.gene58420.t1 | AT4G28530 | 52.414 | 145 | 51 | 2 | 17 | 143 | 10 | 154 | 3.37e-47 | 163 |
MS.gene58420.t1 | AT1G26870 | 56.934 | 137 | 55 | 2 | 9 | 141 | 6 | 142 | 4.37e-47 | 165 |
MS.gene58420.t1 | AT5G39820 | 57.937 | 126 | 51 | 1 | 19 | 142 | 22 | 147 | 4.39e-47 | 163 |
MS.gene58420.t1 | AT5G13180 | 53.472 | 144 | 59 | 3 | 1 | 142 | 1 | 138 | 4.95e-47 | 160 |
MS.gene58420.t1 | AT4G17980 | 57.692 | 130 | 51 | 2 | 17 | 142 | 6 | 135 | 1.01e-46 | 159 |
MS.gene58420.t1 | AT4G17980 | 57.692 | 130 | 51 | 2 | 17 | 142 | 6 | 135 | 1.43e-46 | 160 |
MS.gene58420.t1 | AT2G43000 | 42.308 | 182 | 94 | 3 | 7 | 186 | 7 | 179 | 1.73e-46 | 159 |
MS.gene58420.t1 | AT3G49530 | 54.167 | 144 | 56 | 5 | 2 | 141 | 3 | 140 | 3.20e-45 | 160 |
MS.gene58420.t1 | AT5G24590 | 56.818 | 132 | 54 | 2 | 17 | 145 | 13 | 144 | 4.18e-45 | 160 |
MS.gene58420.t1 | AT2G27300 | 53.488 | 129 | 59 | 1 | 17 | 144 | 14 | 142 | 7.02e-45 | 157 |
MS.gene58420.t1 | AT3G49530 | 54.167 | 144 | 56 | 5 | 2 | 141 | 3 | 140 | 7.98e-45 | 160 |
MS.gene58420.t1 | AT2G02450 | 56.800 | 125 | 53 | 1 | 19 | 142 | 53 | 177 | 5.92e-44 | 155 |
MS.gene58420.t1 | AT2G02450 | 56.800 | 125 | 53 | 1 | 19 | 142 | 53 | 177 | 6.87e-44 | 156 |
MS.gene58420.t1 | AT5G64060 | 47.552 | 143 | 72 | 2 | 14 | 153 | 3 | 145 | 1.37e-43 | 154 |
MS.gene58420.t1 | AT1G34190 | 49.677 | 155 | 68 | 2 | 19 | 163 | 18 | 172 | 2.06e-43 | 157 |
MS.gene58420.t1 | AT1G34180 | 49.677 | 155 | 68 | 2 | 19 | 163 | 18 | 172 | 3.23e-43 | 155 |
MS.gene58420.t1 | AT3G10480 | 49.068 | 161 | 47 | 1 | 17 | 142 | 27 | 187 | 3.60e-43 | 156 |
MS.gene58420.t1 | AT1G52880 | 55.245 | 143 | 60 | 1 | 21 | 159 | 21 | 163 | 7.34e-43 | 151 |
MS.gene58420.t1 | AT5G09330 | 48.252 | 143 | 71 | 2 | 14 | 153 | 3 | 145 | 1.16e-42 | 154 |
MS.gene58420.t1 | AT5G09330 | 48.252 | 143 | 71 | 2 | 14 | 153 | 3 | 145 | 1.16e-42 | 154 |
MS.gene58420.t1 | AT5G09330 | 48.252 | 143 | 71 | 2 | 14 | 153 | 3 | 145 | 1.16e-42 | 154 |
MS.gene58420.t1 | AT5G09330 | 48.252 | 143 | 71 | 2 | 14 | 153 | 3 | 145 | 1.16e-42 | 154 |
MS.gene58420.t1 | AT5G09330 | 48.252 | 143 | 71 | 2 | 14 | 153 | 3 | 145 | 1.16e-42 | 154 |
MS.gene58420.t1 | AT1G34180 | 49.677 | 155 | 68 | 2 | 19 | 163 | 18 | 172 | 1.32e-42 | 155 |
MS.gene58420.t1 | AT2G17040 | 51.969 | 127 | 58 | 1 | 19 | 142 | 8 | 134 | 4.44e-42 | 148 |
MS.gene58420.t1 | AT5G22290 | 51.181 | 127 | 61 | 1 | 19 | 144 | 23 | 149 | 4.74e-42 | 149 |
MS.gene58420.t1 | AT1G32510 | 52.593 | 135 | 55 | 2 | 17 | 142 | 6 | 140 | 2.05e-41 | 146 |
MS.gene58420.t1 | AT1G34180 | 46.707 | 167 | 67 | 3 | 19 | 163 | 18 | 184 | 2.08e-41 | 150 |
MS.gene58420.t1 | AT1G34180 | 46.707 | 167 | 67 | 3 | 19 | 163 | 18 | 184 | 6.74e-41 | 151 |
MS.gene58420.t1 | AT3G44290 | 50.394 | 127 | 62 | 1 | 19 | 144 | 16 | 142 | 6.33e-40 | 141 |
MS.gene58420.t1 | AT3G12910 | 51.095 | 137 | 61 | 3 | 11 | 142 | 15 | 150 | 1.97e-39 | 142 |
MS.gene58420.t1 | AT3G44290 | 50.394 | 127 | 62 | 1 | 19 | 144 | 16 | 142 | 2.40e-39 | 142 |
MS.gene58420.t1 | AT1G32870 | 49.693 | 163 | 68 | 3 | 13 | 163 | 6 | 166 | 7.94e-39 | 145 |
MS.gene58420.t1 | AT1G32870 | 49.693 | 163 | 68 | 3 | 13 | 163 | 6 | 166 | 1.00e-38 | 144 |
MS.gene58420.t1 | AT1G32870 | 50.314 | 159 | 65 | 3 | 17 | 163 | 46 | 202 | 2.19e-38 | 144 |
MS.gene58420.t1 | AT1G56010 | 37.931 | 232 | 112 | 9 | 66 | 281 | 2 | 217 | 7.15e-38 | 136 |
MS.gene58420.t1 | AT5G04395 | 48.592 | 142 | 57 | 2 | 17 | 142 | 28 | 169 | 3.01e-37 | 132 |
MS.gene58420.t1 | AT3G12977 | 42.857 | 168 | 76 | 4 | 66 | 223 | 14 | 171 | 2.90e-36 | 131 |
MS.gene58420.t1 | AT4G10350 | 63.529 | 85 | 28 | 1 | 62 | 143 | 7 | 91 | 2.66e-31 | 120 |
MS.gene58420.t1 | AT4G28530 | 46.875 | 128 | 50 | 2 | 17 | 126 | 10 | 137 | 2.94e-31 | 120 |
MS.gene58420.t1 | AT2G33480 | 65.753 | 73 | 25 | 0 | 70 | 142 | 8 | 80 | 3.51e-27 | 107 |
MS.gene58420.t1 | AT3G04420 | 41.538 | 130 | 72 | 2 | 15 | 140 | 1 | 130 | 8.17e-27 | 108 |
MS.gene58420.t1 | AT1G02230 | 39.873 | 158 | 84 | 6 | 18 | 167 | 4 | 158 | 1.16e-26 | 108 |
MS.gene58420.t1 | AT3G04420 | 41.538 | 130 | 72 | 2 | 15 | 140 | 1 | 130 | 1.70e-26 | 108 |
MS.gene58420.t1 | AT4G01550 | 41.860 | 129 | 69 | 3 | 20 | 142 | 7 | 135 | 4.12e-26 | 108 |
MS.gene58420.t1 | AT5G64530 | 40.769 | 130 | 63 | 3 | 15 | 142 | 1 | 118 | 1.87e-25 | 100 |
MS.gene58420.t1 | AT5G64530 | 40.769 | 130 | 63 | 3 | 15 | 142 | 1 | 118 | 4.53e-25 | 100 |
MS.gene58420.t1 | AT3G44350 | 38.776 | 147 | 80 | 4 | 16 | 154 | 4 | 148 | 1.69e-24 | 98.2 |
MS.gene58420.t1 | AT3G44350 | 39.041 | 146 | 79 | 4 | 16 | 153 | 4 | 147 | 1.91e-24 | 100 |
MS.gene58420.t1 | AT5G22380 | 37.162 | 148 | 85 | 4 | 20 | 159 | 8 | 155 | 3.40e-24 | 99.4 |
MS.gene58420.t1 | AT4G01520 | 37.778 | 135 | 77 | 4 | 15 | 142 | 2 | 136 | 1.44e-23 | 99.4 |
MS.gene58420.t1 | AT1G02220 | 40.000 | 130 | 71 | 3 | 15 | 140 | 1 | 127 | 1.59e-23 | 100 |
MS.gene58420.t1 | AT4G01540 | 38.462 | 130 | 73 | 4 | 20 | 142 | 7 | 136 | 5.02e-23 | 99.8 |
MS.gene58420.t1 | AT4G01540 | 38.462 | 130 | 73 | 4 | 20 | 142 | 7 | 136 | 7.02e-23 | 99.8 |
MS.gene58420.t1 | AT4G01540 | 38.462 | 130 | 73 | 4 | 20 | 142 | 7 | 136 | 7.22e-23 | 99.0 |
MS.gene58420.t1 | AT4G01540 | 38.462 | 130 | 73 | 4 | 20 | 142 | 7 | 136 | 8.04e-23 | 99.0 |
MS.gene58420.t1 | AT1G02250 | 40.602 | 133 | 69 | 4 | 15 | 140 | 1 | 130 | 1.10e-22 | 97.8 |
MS.gene58420.t1 | AT5G14000 | 38.571 | 140 | 80 | 3 | 15 | 150 | 13 | 150 | 2.39e-20 | 87.0 |
MS.gene58420.t1 | AT1G01010 | 39.568 | 139 | 64 | 6 | 20 | 143 | 6 | 139 | 2.73e-20 | 91.7 |
MS.gene58420.t1 | AT5G14000 | 34.591 | 159 | 90 | 4 | 15 | 163 | 13 | 167 | 1.08e-19 | 86.7 |
MS.gene58420.t1 | AT3G10490 | 71.698 | 53 | 15 | 0 | 90 | 142 | 2 | 54 | 2.70e-19 | 88.2 |
MS.gene58420.t1 | AT3G10490 | 71.698 | 53 | 15 | 0 | 90 | 142 | 2 | 54 | 2.70e-19 | 88.2 |
MS.gene58420.t1 | AT2G18060 | 69.388 | 49 | 15 | 0 | 95 | 143 | 2 | 50 | 7.79e-19 | 85.5 |
MS.gene58420.t1 | AT2G43000 | 37.273 | 110 | 59 | 2 | 78 | 186 | 1 | 101 | 1.74e-18 | 82.8 |
MS.gene58420.t1 | AT5G50820 | 35.971 | 139 | 63 | 6 | 15 | 142 | 15 | 138 | 4.84e-16 | 75.9 |
MS.gene58420.t1 | AT3G56530 | 33.846 | 130 | 83 | 2 | 17 | 143 | 52 | 181 | 1.14e-15 | 77.4 |
MS.gene58420.t1 | AT5G22290 | 57.143 | 49 | 21 | 0 | 96 | 144 | 2 | 50 | 2.14e-15 | 75.1 |
MS.gene58420.t1 | AT3G55210 | 36.000 | 150 | 76 | 7 | 17 | 150 | 11 | 156 | 5.30e-14 | 72.0 |
MS.gene58420.t1 | AT5G14490 | 34.266 | 143 | 76 | 4 | 17 | 142 | 58 | 199 | 1.80e-13 | 70.9 |
MS.gene58420.t1 | AT5G14490 | 34.266 | 143 | 76 | 4 | 17 | 142 | 55 | 196 | 1.91e-13 | 70.9 |
MS.gene58420.t1 | AT5G14490 | 34.266 | 143 | 76 | 4 | 17 | 142 | 55 | 196 | 2.69e-13 | 69.7 |
MS.gene58420.t1 | AT5G14490 | 34.266 | 143 | 76 | 4 | 17 | 142 | 58 | 199 | 3.22e-13 | 70.5 |
MS.gene58420.t1 | AT4G29230 | 31.056 | 161 | 84 | 5 | 7 | 142 | 38 | 196 | 1.89e-12 | 68.6 |
MS.gene58420.t1 | AT4G29230 | 31.056 | 161 | 84 | 5 | 7 | 142 | 38 | 196 | 2.27e-12 | 68.2 |
MS.gene58420.t1 | AT3G04430 | 31.061 | 132 | 77 | 4 | 23 | 141 | 6 | 136 | 2.93e-12 | 65.5 |
MS.gene58420.t1 | AT4G28500 | 34.028 | 144 | 75 | 5 | 17 | 142 | 59 | 200 | 4.29e-12 | 66.6 |
MS.gene58420.t1 | AT4G29230 | 31.788 | 151 | 76 | 5 | 17 | 142 | 47 | 195 | 5.02e-12 | 67.4 |
Find 60 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATTCAACAACACAATTTA+TGG | 0.153226 | 8.3:-15794218 | MS.gene58420:CDS |
AAGAATACCTTTGCAGCTTT+TGG | 0.230826 | 8.3:+15794578 | None:intergenic |
GATTCACTTGGTAATGAATT+TGG | 0.258463 | 8.3:-15794374 | MS.gene58420:CDS |
CGTTTCAGTCTTATCAAATA+AGG | 0.280400 | 8.3:-15795150 | MS.gene58420:CDS |
AAGTCATTACCTTTACAAAA+AGG | 0.312749 | 8.3:-15795066 | MS.gene58420:CDS |
CCATTAGAAGATGAAATTCT+TGG | 0.319020 | 8.3:+15794161 | None:intergenic |
CAATATCCTAGTTCTGTTTG+TGG | 0.332743 | 8.3:-15794101 | MS.gene58420:CDS |
CCAAGAATTTCATCTTCTAA+TGG | 0.346332 | 8.3:-15794161 | MS.gene58420:CDS |
GAGAAGATGGATTTGCCTCC+TGG | 0.385429 | 8.3:-15795122 | MS.gene58420:CDS |
AATCAAACAATTGAATGATT+CGG | 0.401710 | 8.3:-15794303 | MS.gene58420:CDS |
CTTATAAGCTCTTCATCAGT+TGG | 0.407970 | 8.3:+15795086 | None:intergenic |
GCAGGGTATTGGAAAGCAAC+TGG | 0.414845 | 8.3:-15794749 | MS.gene58420:CDS |
AGAGACAGAAAATATCCAAC+TGG | 0.424929 | 8.3:-15794797 | MS.gene58420:CDS |
GAGCAACAGAAGCAGGGTAT+TGG | 0.425676 | 8.3:-15794760 | MS.gene58420:CDS |
ACAAACAGAGCAACAGAAGC+AGG | 0.435579 | 8.3:-15794767 | MS.gene58420:CDS |
TATTTCTGGTATAATGAGGT+TGG | 0.436493 | 8.3:-15794396 | MS.gene58420:CDS |
CATTAGAAGATGAAATTCTT+GGG | 0.450617 | 8.3:+15794162 | None:intergenic |
ATCAATTGAGTTGGAGAAGC+AGG | 0.451718 | 8.3:+15794271 | None:intergenic |
CTGATTCGTCGAATTCGATT+GGG | 0.452226 | 8.3:-15794328 | MS.gene58420:CDS |
CCTCAACAAGTCTGAACCTT+GGG | 0.462640 | 8.3:-15795000 | MS.gene58420:CDS |
AATTTCTCTGCAAGAGCCAT+TGG | 0.466190 | 8.3:-15795032 | MS.gene58420:CDS |
CTGTTTGTCCTCAACCCAGT+TGG | 0.474621 | 8.3:+15794782 | None:intergenic |
ACTGATTCGTCGAATTCGAT+TGG | 0.482670 | 8.3:-15794329 | MS.gene58420:CDS |
CACATATTTCTGGTATAATG+AGG | 0.489545 | 8.3:-15794400 | MS.gene58420:CDS |
GATGAGTGTATCACAGGAAA+CGG | 0.491856 | 8.3:-15794006 | MS.gene58420:CDS |
AAATAAGGAAGATGAGAAGA+TGG | 0.493958 | 8.3:-15795135 | MS.gene58420:CDS |
TTATAAGCTCTTCATCAGTT+GGG | 0.498830 | 8.3:+15795087 | None:intergenic |
TCAACAGCTGCAACAGAAGC+AGG | 0.510943 | 8.3:+15793888 | None:intergenic |
TCTTTGAACATCAATTGAGT+TGG | 0.511446 | 8.3:+15794262 | None:intergenic |
GAAAATATCCAACTGGGTTG+AGG | 0.516250 | 8.3:-15794790 | MS.gene58420:CDS |
ATGCATGAATATCGACTTGA+GGG | 0.521465 | 8.3:-15794623 | MS.gene58420:CDS |
TACTTACATGGTAAATCCCA+AGG | 0.522817 | 8.3:+15794984 | None:intergenic |
ATGAATCAAAGATCCCTCCT+TGG | 0.526043 | 8.3:+15794237 | None:intergenic |
CCCAAGGTTCAGACTTGTTG+AGG | 0.528521 | 8.3:+15795000 | None:intergenic |
GTTGGGTGAAATCGAAATCC+AGG | 0.529612 | 8.3:+15795104 | None:intergenic |
TTCAAAGGGAAATCGTTGGT+TGG | 0.533657 | 8.3:-15794710 | MS.gene58420:CDS |
TTCAACAACACAATTTATGG+TGG | 0.546063 | 8.3:-15794215 | MS.gene58420:CDS |
TACAAAGGAAGAGCACCTAA+AGG | 0.552423 | 8.3:-15794665 | MS.gene58420:CDS |
ACAAATGATGAGTGTATCAC+AGG | 0.560386 | 8.3:-15794012 | MS.gene58420:CDS |
TAATCTTCCAAAAGCTGCAA+AGG | 0.563656 | 8.3:-15794585 | MS.gene58420:intron |
TGCATACCACAAACAGAACT+AGG | 0.564682 | 8.3:+15794095 | None:intergenic |
GCTGCAACAGAAGCAGGTGG+TGG | 0.576822 | 8.3:+15793894 | None:intergenic |
ACCTCAACAAGTCTGAACCT+TGG | 0.581627 | 8.3:-15795001 | MS.gene58420:CDS |
CAGGGTATTGGAAAGCAACT+GGG | 0.599644 | 8.3:-15794748 | MS.gene58420:CDS |
ATTGCAAATTAACCGCACCT+TGG | 0.601004 | 8.3:+15794120 | None:intergenic |
TATGCATGAATATCGACTTG+AGG | 0.612535 | 8.3:-15794624 | MS.gene58420:CDS |
ATTGATGTTCAAAGAAACCA+AGG | 0.616657 | 8.3:-15794254 | MS.gene58420:CDS |
GAATTCGACGAATCAGTAAG+TGG | 0.627084 | 8.3:+15794335 | None:intergenic |
GTTGAGGTCTACATCACCAA+TGG | 0.634909 | 8.3:+15795016 | None:intergenic |
AGAGCTTTGTATGAAAACAA+CGG | 0.644899 | 8.3:-15794056 | MS.gene58420:CDS |
ATAATGAGGTTGGATTCACT+TGG | 0.646475 | 8.3:-15794386 | MS.gene58420:CDS |
CAAACAGAGCAACAGAAGCA+GGG | 0.648037 | 8.3:-15794766 | MS.gene58420:CDS |
GAGACAGAAAATATCCAACT+GGG | 0.662566 | 8.3:-15794796 | MS.gene58420:CDS |
TCATTATACTCTAATAACCA+AGG | 0.663722 | 8.3:-15794137 | MS.gene58420:CDS |
ATGTTCAAAGAAACCAAGGA+GGG | 0.670364 | 8.3:-15794250 | MS.gene58420:CDS |
ATACTCTAATAACCAAGGTG+CGG | 0.686349 | 8.3:-15794132 | MS.gene58420:CDS |
TTCGACGAATCAGTAAGTGG+TGG | 0.693712 | 8.3:+15794338 | None:intergenic |
ACAGCTGCAACAGAAGCAGG+TGG | 0.707691 | 8.3:+15793891 | None:intergenic |
GATGTTCAAAGAAACCAAGG+AGG | 0.712058 | 8.3:-15794251 | MS.gene58420:CDS |
GGGTGAAATCGAAATCCAGG+AGG | 0.750114 | 8.3:+15795107 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTGTTTTGAAATTTT+GGG | - | chr8.3:15794148-15794167 | MS.gene58420:CDS | 10.0% |
!!! | TTTTTTTTGTTTTGAAATTT+TGG | - | chr8.3:15794147-15794166 | MS.gene58420:CDS | 10.0% |
!!! | AAAGATAAAGAAATTTTCAA+AGG | - | chr8.3:15794293-15794312 | MS.gene58420:CDS | 15.0% |
!!! | AAGATAAAGAAATTTTCAAA+GGG | - | chr8.3:15794294-15794313 | MS.gene58420:CDS | 15.0% |
!! | AAGATTCATATCAAATTCAA+AGG | + | chr8.3:15794109-15794128 | None:intergenic | 20.0% |
!! | AATCAAACAATTGAATGATT+CGG | - | chr8.3:15794715-15794734 | MS.gene58420:CDS | 20.0% |
!! | AATCCAAATTCAAATTCAAA+AGG | + | chr8.3:15794524-15794543 | None:intergenic | 20.0% |
!! | TAAAGGAGAAAAAAGTAATT+GGG | - | chr8.3:15794370-15794389 | MS.gene58420:CDS | 20.0% |
!! | TTTGAATTTGAATTTGGATT+TGG | - | chr8.3:15794524-15794543 | MS.gene58420:intron | 20.0% |
!!! | AATCAATAACCTTTTTGTAA+AGG | + | chr8.3:15793964-15793983 | None:intergenic | 20.0% |
!!! | ATTCAAAAGGCATAAAAAAA+TGG | + | chr8.3:15794511-15794530 | None:intergenic | 20.0% |
!!! | GTTTTAGTTAAAGCAAAAAT+GGG | - | chr8.3:15794170-15794189 | MS.gene58420:CDS | 20.0% |
! | AAAAAGGTGAAAACAAAAAG+TGG | + | chr8.3:15794081-15794100 | None:intergenic | 25.0% |
! | AAAAGGTGAAAACAAAAAGT+GGG | + | chr8.3:15794080-15794099 | None:intergenic | 25.0% |
! | AAATTCAAAGGTGGTAAAAA+AGG | + | chr8.3:15794097-15794116 | None:intergenic | 25.0% |
! | AAGTCATTACCTTTACAAAA+AGG | - | chr8.3:15793952-15793971 | MS.gene58420:CDS | 25.0% |
! | ATTCATATCAAATTCAAAGG+TGG | + | chr8.3:15794106-15794125 | None:intergenic | 25.0% |
! | CATTAGAAGATGAAATTCTT+GGG | + | chr8.3:15794859-15794878 | None:intergenic | 25.0% |
! | CTAAAGGAGAAAAAAGTAAT+TGG | - | chr8.3:15794369-15794388 | MS.gene58420:CDS | 25.0% |
! | TCATTATACTCTAATAACCA+AGG | - | chr8.3:15794881-15794900 | MS.gene58420:intron | 25.0% |
! | TCATTCAACAACACAATTTA+TGG | - | chr8.3:15794800-15794819 | MS.gene58420:CDS | 25.0% |
!! | ATGCCTTTTGAATTTGAATT+TGG | - | chr8.3:15794518-15794537 | MS.gene58420:intron | 25.0% |
!!! | AAAACTCTTGTTTTCTACAA+AGG | - | chr8.3:15794338-15794357 | MS.gene58420:CDS | 25.0% |
!!! | CAAATTTTGATATTGGTAGA+AGG | - | chr8.3:15795077-15795096 | MS.gene58420:CDS | 25.0% |
!!! | CAATTACTTTTTTCTCCTTT+AGG | + | chr8.3:15794371-15794390 | None:intergenic | 25.0% |
!!! | GGTTTTAGTTAAAGCAAAAA+TGG | - | chr8.3:15794169-15794188 | MS.gene58420:CDS | 25.0% |
!!! | GTTGTGTCAAATTTTGATAT+TGG | - | chr8.3:15795070-15795089 | MS.gene58420:CDS | 25.0% |
!!! | TTTGATTGGTTTTACTTACA+TGG | + | chr8.3:15794049-15794068 | None:intergenic | 25.0% |
AAATAAGGAAGATGAGAAGA+TGG | - | chr8.3:15793883-15793902 | MS.gene58420:CDS | 30.0% | |
ATTGATGTTCAAAGAAACCA+AGG | - | chr8.3:15794764-15794783 | MS.gene58420:CDS | 30.0% | |
CAAAAATGGGAGAAAAAGAA+TGG | - | chr8.3:15794183-15794202 | MS.gene58420:CDS | 30.0% | |
CCAAGAATTTCATCTTCTAA+TGG | - | chr8.3:15794857-15794876 | MS.gene58420:intron | 30.0% | |
CCATTAGAAGATGAAATTCT+TGG | + | chr8.3:15794860-15794879 | None:intergenic | 30.0% | |
GGGAAAAAAACACATATTTC+TGG | - | chr8.3:15794608-15794627 | MS.gene58420:CDS | 30.0% | |
TCTTTGAACATCAATTGAGT+TGG | + | chr8.3:15794759-15794778 | None:intergenic | 30.0% | |
TTATAAGCTCTTCATCAGTT+GGG | + | chr8.3:15793934-15793953 | None:intergenic | 30.0% | |
TTCAACAACACAATTTATGG+TGG | - | chr8.3:15794803-15794822 | MS.gene58420:CDS | 30.0% | |
! | AATTTTCAAAGGGAAATCGT+TGG | - | chr8.3:15794304-15794323 | MS.gene58420:CDS | 30.0% |
! | AGAGCTTTGTATGAAAACAA+CGG | - | chr8.3:15794962-15794981 | MS.gene58420:intron | 30.0% |
! | ATTGTGTTTTGCAGAATGAA+TGG | - | chr8.3:15794552-15794571 | MS.gene58420:intron | 30.0% |
! | CGTTTCAGTCTTATCAAATA+AGG | - | chr8.3:15793868-15793887 | MS.gene58420:CDS | 30.0% |
! | TTGATTTTCATGGTACTTTG+TGG | - | chr8.3:15795149-15795168 | MS.gene58420:CDS | 30.0% |
! | TTGTGTTTTGCAGAATGAAT+GGG | - | chr8.3:15794553-15794572 | MS.gene58420:intron | 30.0% |
!! | CACATATTTCTGGTATAATG+AGG | - | chr8.3:15794618-15794637 | MS.gene58420:CDS | 30.0% |
!! | GATTCACTTGGTAATGAATT+TGG | - | chr8.3:15794644-15794663 | MS.gene58420:CDS | 30.0% |
!! | TATTTCTGGTATAATGAGGT+TGG | - | chr8.3:15794622-15794641 | MS.gene58420:CDS | 30.0% |
ACAAATGATGAGTGTATCAC+AGG | - | chr8.3:15795006-15795025 | MS.gene58420:CDS | 35.0% | |
AGAGACAGAAAATATCCAAC+TGG | - | chr8.3:15794221-15794240 | MS.gene58420:CDS | 35.0% | |
AGTGGGTCTGAAAATTTGAT+TGG | + | chr8.3:15794063-15794082 | None:intergenic | 35.0% | |
ATAATGAGGTTGGATTCACT+TGG | - | chr8.3:15794632-15794651 | MS.gene58420:CDS | 35.0% | |
ATACTCTAATAACCAAGGTG+CGG | - | chr8.3:15794886-15794905 | MS.gene58420:intron | 35.0% | |
ATGTTCAAAGAAACCAAGGA+GGG | - | chr8.3:15794768-15794787 | MS.gene58420:CDS | 35.0% | |
CTTATAAGCTCTTCATCAGT+TGG | + | chr8.3:15793935-15793954 | None:intergenic | 35.0% | |
GAGACAGAAAATATCCAACT+GGG | - | chr8.3:15794222-15794241 | MS.gene58420:CDS | 35.0% | |
TAATCTTCCAAAAGCTGCAA+AGG | - | chr8.3:15794433-15794452 | MS.gene58420:intron | 35.0% | |
TACTTACATGGTAAATCCCA+AGG | + | chr8.3:15794037-15794056 | None:intergenic | 35.0% | |
! | AAGAATACCTTTGCAGCTTT+TGG | + | chr8.3:15794443-15794462 | None:intergenic | 35.0% |
! | AGAATGAATGGGTGATTTGT+AGG | - | chr8.3:15794564-15794583 | MS.gene58420:intron | 35.0% |
! | GAATGAATGGGTGATTTGTA+GGG | - | chr8.3:15794565-15794584 | MS.gene58420:intron | 35.0% |
!! | ATGCATGAATATCGACTTGA+GGG | - | chr8.3:15794395-15794414 | MS.gene58420:CDS | 35.0% |
!! | CAATATCCTAGTTCTGTTTG+TGG | - | chr8.3:15794917-15794936 | MS.gene58420:intron | 35.0% |
!! | TATGCATGAATATCGACTTG+AGG | - | chr8.3:15794394-15794413 | MS.gene58420:CDS | 35.0% |
!! | TTTTTCAGAAGAGTTCAGCT+GGG | - | chr8.3:15794588-15794607 | MS.gene58420:CDS | 35.0% |
AATTTCTCTGCAAGAGCCAT+TGG | - | chr8.3:15793986-15794005 | MS.gene58420:CDS | 40.0% | |
ATGAATCAAAGATCCCTCCT+TGG | + | chr8.3:15794784-15794803 | None:intergenic | 40.0% | |
ATTGCAAATTAACCGCACCT+TGG | + | chr8.3:15794901-15794920 | None:intergenic | 40.0% | |
GAAAATATCCAACTGGGTTG+AGG | - | chr8.3:15794228-15794247 | MS.gene58420:CDS | 40.0% | |
GAATTCGACGAATCAGTAAG+TGG | + | chr8.3:15794686-15794705 | None:intergenic | 40.0% | |
GATGAGTGTATCACAGGAAA+CGG | - | chr8.3:15795012-15795031 | MS.gene58420:CDS | 40.0% | |
GATGTTCAAAGAAACCAAGG+AGG | - | chr8.3:15794767-15794786 | MS.gene58420:CDS | 40.0% | |
TGCATACCACAAACAGAACT+AGG | + | chr8.3:15794926-15794945 | None:intergenic | 40.0% | |
TTCAAAGGGAAATCGTTGGT+TGG | - | chr8.3:15794308-15794327 | MS.gene58420:CDS | 40.0% | |
! | CTGATTCGTCGAATTCGATT+GGG | - | chr8.3:15794690-15794709 | MS.gene58420:CDS | 40.0% |
!! | ACTGATTCGTCGAATTCGAT+TGG | - | chr8.3:15794689-15794708 | MS.gene58420:CDS | 40.0% |
!! | ATCAATTGAGTTGGAGAAGC+AGG | + | chr8.3:15794750-15794769 | None:intergenic | 40.0% |
!! | GTTTTTCAGAAGAGTTCAGC+TGG | - | chr8.3:15794587-15794606 | MS.gene58420:CDS | 40.0% |
!! | TACAAAGGAAGAGCACCTAA+AGG | - | chr8.3:15794353-15794372 | MS.gene58420:CDS | 40.0% |
!!! | GTTGCAGCTGTTGATTTTCA+TGG | - | chr8.3:15795139-15795158 | MS.gene58420:CDS | 40.0% |
ACAAACAGAGCAACAGAAGC+AGG | - | chr8.3:15794251-15794270 | MS.gene58420:CDS | 45.0% | |
ACCTCAACAAGTCTGAACCT+TGG | - | chr8.3:15794017-15794036 | MS.gene58420:CDS | 45.0% | |
CAAACAGAGCAACAGAAGCA+GGG | - | chr8.3:15794252-15794271 | MS.gene58420:CDS | 45.0% | |
CCTCAACAAGTCTGAACCTT+GGG | - | chr8.3:15794018-15794037 | MS.gene58420:CDS | 45.0% | |
GTTGAGGTCTACATCACCAA+TGG | + | chr8.3:15794005-15794024 | None:intergenic | 45.0% | |
GTTGGGTGAAATCGAAATCC+AGG | + | chr8.3:15793917-15793936 | None:intergenic | 45.0% | |
TTCGACGAATCAGTAAGTGG+TGG | + | chr8.3:15794683-15794702 | None:intergenic | 45.0% | |
!! | CAGGGTATTGGAAAGCAACT+GGG | - | chr8.3:15794270-15794289 | MS.gene58420:CDS | 45.0% |
CTGTTTGTCCTCAACCCAGT+TGG | + | chr8.3:15794239-15794258 | None:intergenic | 50.0% | |
GAGCAACAGAAGCAGGGTAT+TGG | - | chr8.3:15794258-15794277 | MS.gene58420:CDS | 50.0% | |
GGGTGAAATCGAAATCCAGG+AGG | + | chr8.3:15793914-15793933 | None:intergenic | 50.0% | |
TCAACAGCTGCAACAGAAGC+AGG | + | chr8.3:15795133-15795152 | None:intergenic | 50.0% | |
! | GAGAAGATGGATTTGCCTCC+TGG | - | chr8.3:15793896-15793915 | MS.gene58420:CDS | 50.0% |
!! | CCCAAGGTTCAGACTTGTTG+AGG | + | chr8.3:15794021-15794040 | None:intergenic | 50.0% |
!! | GCAGGGTATTGGAAAGCAAC+TGG | - | chr8.3:15794269-15794288 | MS.gene58420:CDS | 50.0% |
ACAGCTGCAACAGAAGCAGG+TGG | + | chr8.3:15795130-15795149 | None:intergenic | 55.0% | |
GCTGCAACAGAAGCAGGTGG+TGG | + | chr8.3:15795127-15795146 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 15793860 | 15795180 | 15793860 | ID=MS.gene58420 |
chr8.3 | mRNA | 15793860 | 15795180 | 15793860 | ID=MS.gene58420.t1;Parent=MS.gene58420 |
chr8.3 | exon | 15794991 | 15795180 | 15794991 | ID=MS.gene58420.t1.exon1;Parent=MS.gene58420.t1 |
chr8.3 | CDS | 15794991 | 15795180 | 15794991 | ID=cds.MS.gene58420.t1;Parent=MS.gene58420.t1 |
chr8.3 | exon | 15794586 | 15794863 | 15794586 | ID=MS.gene58420.t1.exon2;Parent=MS.gene58420.t1 |
chr8.3 | CDS | 15794586 | 15794863 | 15794586 | ID=cds.MS.gene58420.t1;Parent=MS.gene58420.t1 |
chr8.3 | exon | 15793860 | 15794444 | 15793860 | ID=MS.gene58420.t1.exon3;Parent=MS.gene58420.t1 |
chr8.3 | CDS | 15793860 | 15794444 | 15793860 | ID=cds.MS.gene58420.t1;Parent=MS.gene58420.t1 |
Gene Sequence |
Protein sequence |