Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033697.t1 | XP_003624478.1 | 98.6 | 369 | 5 | 0 | 2 | 370 | 5 | 373 | 1.50E-207 | 731.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033697.t1 | Q9FMU6 | 79.5 | 365 | 65 | 3 | 8 | 363 | 3 | 366 | 4.6e-165 | 582.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033697.t1 | Q2HUK6 | 98.6 | 369 | 5 | 0 | 2 | 370 | 5 | 373 | 1.1e-207 | 731.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene033697 | MS.gene64914 | PPI |
| MS.gene033697 | MS.gene86518 | PPI |
| MS.gene72685 | MS.gene033697 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033697.t1 | MTR_7g083790 | 98.391 | 373 | 3 | 1 | 1 | 370 | 1 | 373 | 0.0 | 740 |
| MS.gene033697.t1 | MTR_8g099910 | 77.654 | 358 | 75 | 2 | 6 | 363 | 5 | 357 | 0.0 | 563 |
| MS.gene033697.t1 | MTR_6g033280 | 71.633 | 349 | 89 | 2 | 11 | 358 | 3 | 342 | 0.0 | 517 |
| MS.gene033697.t1 | MTR_4g094578 | 43.253 | 289 | 162 | 1 | 74 | 360 | 24 | 312 | 1.64e-87 | 267 |
| MS.gene033697.t1 | MTR_5g024770 | 46.643 | 283 | 129 | 1 | 71 | 353 | 13 | 273 | 1.80e-86 | 264 |
| MS.gene033697.t1 | MTR_6g034515 | 29.008 | 262 | 150 | 9 | 89 | 331 | 77 | 321 | 4.13e-16 | 79.3 |
| MS.gene033697.t1 | MTR_3g107510 | 26.339 | 224 | 156 | 5 | 44 | 264 | 86 | 303 | 1.15e-15 | 78.2 |
| MS.gene033697.t1 | MTR_2g436930 | 24.686 | 239 | 155 | 4 | 79 | 295 | 15 | 250 | 1.99e-13 | 70.9 |
| MS.gene033697.t1 | MTR_2g436930 | 26.263 | 198 | 119 | 7 | 75 | 249 | 125 | 318 | 5.63e-11 | 63.5 |
| MS.gene033697.t1 | MTR_1g012030 | 27.322 | 183 | 129 | 3 | 82 | 264 | 142 | 320 | 4.13e-13 | 70.5 |
| MS.gene033697.t1 | MTR_8g076760 | 25.714 | 210 | 121 | 7 | 68 | 253 | 105 | 303 | 4.17e-13 | 69.7 |
| MS.gene033697.t1 | MTR_8g027975 | 27.863 | 262 | 166 | 9 | 73 | 315 | 43 | 300 | 4.40e-13 | 70.1 |
| MS.gene033697.t1 | MTR_8g027975 | 24.737 | 190 | 119 | 5 | 86 | 251 | 160 | 349 | 4.80e-12 | 67.0 |
| MS.gene033697.t1 | MTR_5g009500 | 25.789 | 190 | 119 | 5 | 86 | 253 | 147 | 336 | 4.63e-13 | 70.1 |
| MS.gene033697.t1 | MTR_5g009500 | 27.984 | 243 | 149 | 9 | 71 | 295 | 28 | 262 | 4.09e-12 | 67.0 |
| MS.gene033697.t1 | MTR_4g119770 | 23.750 | 240 | 158 | 4 | 79 | 295 | 14 | 251 | 5.55e-13 | 68.6 |
| MS.gene033697.t1 | MTR_7g084400 | 30.493 | 223 | 142 | 6 | 75 | 293 | 210 | 423 | 7.46e-13 | 70.1 |
| MS.gene033697.t1 | MTR_4g119770 | 23.750 | 240 | 158 | 4 | 79 | 295 | 14 | 251 | 9.77e-13 | 68.9 |
| MS.gene033697.t1 | MTR_4g119770 | 24.390 | 205 | 126 | 7 | 75 | 255 | 126 | 325 | 5.04e-11 | 63.5 |
| MS.gene033697.t1 | MTR_8g096050 | 30.734 | 218 | 136 | 7 | 80 | 293 | 229 | 435 | 1.89e-12 | 68.9 |
| MS.gene033697.t1 | MTR_7g084400 | 30.729 | 192 | 126 | 4 | 75 | 262 | 204 | 392 | 3.33e-12 | 67.8 |
| MS.gene033697.t1 | MTR_7g109135 | 30.000 | 190 | 114 | 7 | 89 | 264 | 34 | 218 | 3.51e-12 | 65.9 |
| MS.gene033697.t1 | MTR_3g098460 | 30.000 | 220 | 135 | 8 | 80 | 293 | 207 | 413 | 3.61e-12 | 67.8 |
| MS.gene033697.t1 | MTR_7g109135 | 28.421 | 190 | 117 | 6 | 89 | 264 | 133 | 317 | 4.11e-12 | 67.0 |
| MS.gene033697.t1 | MTR_7g109135 | 28.421 | 190 | 117 | 6 | 89 | 264 | 55 | 239 | 5.78e-12 | 65.5 |
| MS.gene033697.t1 | MTR_4g114320 | 25.824 | 182 | 124 | 4 | 82 | 259 | 126 | 300 | 2.05e-11 | 65.1 |
| MS.gene033697.t1 | MTR_2g436930 | 26.263 | 198 | 119 | 7 | 75 | 249 | 35 | 228 | 3.14e-11 | 63.2 |
| MS.gene033697.t1 | MTR_5g073040 | 25.874 | 286 | 184 | 7 | 80 | 350 | 41 | 313 | 8.71e-11 | 62.8 |
| MS.gene033697.t1 | MTR_1g087840 | 27.746 | 173 | 105 | 6 | 93 | 251 | 33 | 199 | 9.20e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033697.t1 | AT5G14040 | 78.904 | 365 | 69 | 2 | 7 | 363 | 2 | 366 | 0.0 | 574 |
| MS.gene033697.t1 | AT3G48850 | 68.820 | 356 | 108 | 1 | 7 | 362 | 2 | 354 | 0.0 | 510 |
| MS.gene033697.t1 | AT2G17270 | 50.993 | 302 | 143 | 3 | 68 | 368 | 11 | 308 | 4.69e-107 | 317 |
| MS.gene033697.t1 | AT5G66380 | 26.636 | 214 | 122 | 8 | 68 | 258 | 102 | 303 | 5.61e-14 | 72.4 |
| MS.gene033697.t1 | AT5G51050 | 29.474 | 285 | 168 | 12 | 80 | 348 | 225 | 492 | 6.64e-14 | 73.2 |
| MS.gene033697.t1 | AT1G25380 | 27.895 | 190 | 121 | 6 | 89 | 266 | 131 | 316 | 2.91e-13 | 70.9 |
| MS.gene033697.t1 | AT1G25380 | 27.895 | 190 | 121 | 6 | 89 | 266 | 131 | 316 | 2.91e-13 | 70.9 |
| MS.gene033697.t1 | AT3G53940 | 28.729 | 181 | 114 | 6 | 80 | 251 | 182 | 356 | 8.77e-13 | 69.3 |
| MS.gene033697.t1 | AT4G01100 | 25.794 | 252 | 157 | 8 | 71 | 295 | 32 | 280 | 1.38e-12 | 68.6 |
| MS.gene033697.t1 | AT1G79900 | 25.253 | 198 | 144 | 3 | 67 | 264 | 98 | 291 | 1.39e-12 | 68.2 |
| MS.gene033697.t1 | AT4G01100 | 26.778 | 239 | 157 | 8 | 71 | 295 | 32 | 266 | 1.97e-12 | 68.2 |
| MS.gene033697.t1 | AT5G48970 | 25.373 | 201 | 120 | 6 | 75 | 249 | 132 | 328 | 1.27e-11 | 65.5 |
| MS.gene033697.t1 | AT5G48970 | 23.431 | 239 | 159 | 4 | 80 | 295 | 23 | 260 | 2.92e-11 | 64.7 |
| MS.gene033697.t1 | AT5G48970 | 25.373 | 201 | 120 | 6 | 75 | 249 | 61 | 257 | 1.29e-11 | 64.7 |
| MS.gene033697.t1 | AT4G01100 | 25.571 | 219 | 149 | 6 | 88 | 295 | 1 | 216 | 3.85e-11 | 63.9 |
| MS.gene033697.t1 | AT4G32400 | 28.261 | 184 | 117 | 4 | 72 | 249 | 205 | 379 | 4.35e-11 | 64.3 |
| MS.gene033697.t1 | AT2G47490 | 27.174 | 184 | 122 | 5 | 91 | 265 | 129 | 309 | 8.63e-11 | 62.8 |
| MS.gene033697.t1 | AT1G07030 | 27.374 | 179 | 120 | 4 | 74 | 249 | 36 | 207 | 8.90e-11 | 62.8 |
Find 122 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCCGACTTGACAAATTT+TGG | 0.064803 | 7.3:-24685933 | None:intergenic |
| GCACAGGGTGCTTGCAAATT+TGG | 0.141897 | 7.3:+24685714 | MS.gene033697:CDS |
| CCTTTGCTGCACTCATTCTT+TGG | 0.207799 | 7.3:-24686946 | None:intergenic |
| GTAGATCAAGGTCTTGTATT+TGG | 0.240422 | 7.3:-24685793 | None:intergenic |
| GTGAATAACCGGTAGGGTTT+TGG | 0.271570 | 7.3:-24684315 | None:intergenic |
| CACAGGGTGCTTGCAAATTT+GGG | 0.272981 | 7.3:+24685715 | MS.gene033697:CDS |
| ACAAGGGATTAGTGCCTCTA+TGG | 0.295974 | 7.3:+24686087 | MS.gene033697:CDS |
| ATCACCAACTGTTGCTCCTT+TGG | 0.305945 | 7.3:-24687070 | None:intergenic |
| GTCAAGTCGGAAGGAGCTTT+GGG | 0.313946 | 7.3:+24685942 | MS.gene033697:CDS |
| CTGCACTCATTCTTTGGTTG+TGG | 0.319170 | 7.3:-24686940 | None:intergenic |
| CCTTCTCCTAAGGAACCTTT+TGG | 0.320200 | 7.3:+24684419 | MS.gene033697:CDS |
| ACCAAGACCTCTTGCAAAAC+CGG | 0.326720 | 7.3:-24685901 | None:intergenic |
| TGCACTCATTCTTTGGTTGT+GGG | 0.330467 | 7.3:-24686939 | None:intergenic |
| TTCTATGCTGCTTGTACTGC+TGG | 0.334701 | 7.3:+24684467 | MS.gene033697:CDS |
| GGCGCGGCGGCGGAAGGAGC+GGG | 0.336833 | 7.3:-24684356 | None:intergenic |
| CCGCCTTCACTCCGTGGAAC+TGG | 0.348054 | 7.3:+24684377 | MS.gene033697:CDS |
| TTGTATTTGGCTGCATACTC+AGG | 0.350724 | 7.3:-24685780 | None:intergenic |
| TGTCAAGTCGGAAGGAGCTT+TGG | 0.366299 | 7.3:+24685941 | MS.gene033697:CDS |
| TTTGCTGGTGGATACATTGC+TGG | 0.369619 | 7.3:+24686988 | MS.gene033697:CDS |
| CGGCGCGGCGGCGGAAGGAG+CGG | 0.370068 | 7.3:-24684357 | None:intergenic |
| GTTCAAGGAGCAGGGAGTTA+AGG | 0.373432 | 7.3:+24685650 | MS.gene033697:CDS |
| CGTTGCACTTTGCCCATTCG+AGG | 0.378339 | 7.3:+24685851 | MS.gene033697:CDS |
| TTCAAGGAGCAGGGAGTTAA+GGG | 0.378873 | 7.3:+24685651 | MS.gene033697:CDS |
| CCTCTCCGTATTGTTATGAT+TGG | 0.392836 | 7.3:+24687237 | MS.gene033697:CDS |
| GTTATGATTGGAACACTTAC+CGG | 0.392999 | 7.3:+24687249 | MS.gene033697:CDS |
| GGCGGCGGAAGGAGCGGGAC+CGG | 0.404628 | 7.3:-24684351 | None:intergenic |
| TCCTTTGCAATCTCTGCAAT+GGG | 0.410320 | 7.3:-24687431 | None:intergenic |
| ATGCAGGCTGTTGCGAAGTT+TGG | 0.417122 | 7.3:+24687186 | MS.gene033697:intron |
| CTGACGATCTGGTGAATAAC+CGG | 0.417433 | 7.3:-24684326 | None:intergenic |
| AAGTACAAGAGCATCTCATC+AGG | 0.418546 | 7.3:+24685615 | MS.gene033697:CDS |
| GATGCTTTCAAAGTCTTTGT+GGG | 0.421116 | 7.3:+24687291 | MS.gene033697:CDS |
| TTGCAAGAGGTCTTGGTGAT+GGG | 0.421210 | 7.3:+24685907 | MS.gene033697:CDS |
| TGATGCTTTCAAAGTCTTTG+TGG | 0.429250 | 7.3:+24687290 | MS.gene033697:CDS |
| ATTCACCAGATCGTCAGTTC+CGG | 0.433147 | 7.3:+24684332 | MS.gene033697:CDS |
| AAGACCTTGATCTACCTTGC+TGG | 0.435876 | 7.3:+24685801 | MS.gene033697:CDS |
| AAGTACTATTCTGATATTGC+TGG | 0.438339 | 7.3:+24685756 | MS.gene033697:CDS |
| GAGATGCTCTTGTACTTGGC+AGG | 0.444922 | 7.3:-24685609 | None:intergenic |
| TTCCTTTGCAATCTCTGCAA+TGG | 0.446057 | 7.3:-24687432 | None:intergenic |
| TTTGCAAGAGGTCTTGGTGA+TGG | 0.446061 | 7.3:+24685906 | MS.gene033697:CDS |
| TCACTCCGTGGAACTGGATC+CGG | 0.455713 | 7.3:+24684383 | MS.gene033697:CDS |
| GCAATCTCTGCAATGGGAGC+AGG | 0.456052 | 7.3:-24687425 | None:intergenic |
| AAGAGCATCTCATCAGGGTT+TGG | 0.458213 | 7.3:+24685621 | MS.gene033697:CDS |
| GAGTGAAGGCGGCGCGGCGG+CGG | 0.460339 | 7.3:-24684366 | None:intergenic |
| CTCATTCTTTGGTTGTGGGA+TGG | 0.461022 | 7.3:-24686935 | None:intergenic |
| GAAGGCGGCGCGGCGGCGGA+AGG | 0.466553 | 7.3:-24684362 | None:intergenic |
| TGATGAGATGCTCTTGTACT+TGG | 0.466999 | 7.3:-24685613 | None:intergenic |
| ATCTTGCCAAAAGGTTCCTT+AGG | 0.467490 | 7.3:-24684425 | None:intergenic |
| GGATGGGTCCCTACATTACT+TGG | 0.467879 | 7.3:+24685684 | MS.gene033697:CDS |
| GGAGCAGCACCACCGGTTGT+TGG | 0.480665 | 7.3:-24687404 | None:intergenic |
| ATATTTGTTAGGCCAACAAC+CGG | 0.488505 | 7.3:+24687392 | MS.gene033697:intron |
| CGGGACCGGAACTGACGATC+TGG | 0.489410 | 7.3:-24684337 | None:intergenic |
| CAAGGGATTAGTGCCTCTAT+GGG | 0.492057 | 7.3:+24686088 | MS.gene033697:CDS |
| TTATGATTGCAGGCTGTACA+AGG | 0.497538 | 7.3:+24686070 | MS.gene033697:intron |
| CTCAACAATGGTCTCAAAAG+AGG | 0.497947 | 7.3:-24686896 | None:intergenic |
| ATTCATGATTCCTTCTCCTA+AGG | 0.502454 | 7.3:+24684409 | MS.gene033697:CDS |
| ATATATTCCCCACTGGGCTC+CGG | 0.504355 | 7.3:-24687268 | None:intergenic |
| CCAAAGAATGAGTGCAGCAA+AGG | 0.506478 | 7.3:+24686946 | MS.gene033697:CDS |
| GTTGCGAAGTTTGGTGTGGT+TGG | 0.508050 | 7.3:+24687195 | MS.gene033697:CDS |
| ATTACTTGGTTACAGTGCAC+AGG | 0.515158 | 7.3:+24685698 | MS.gene033697:CDS |
| ATGATTCCTTCATTTCTCTA+CGG | 0.518236 | 7.3:+24684284 | MS.gene033697:CDS |
| TTCTTCCACCAAAACCCTAC+CGG | 0.523169 | 7.3:+24684307 | MS.gene033697:CDS |
| AAAGAGACAAGGTTATCAGC+AGG | 0.524035 | 7.3:-24687036 | None:intergenic |
| ATGAAGGAATCATGTTTCTA+CGG | 0.525899 | 7.3:-24684274 | None:intergenic |
| GGGAGCAGGAGCAGCACCAC+CGG | 0.526192 | 7.3:-24687411 | None:intergenic |
| TACATCTCGATCTTGCCAAA+AGG | 0.527813 | 7.3:-24684434 | None:intergenic |
| CTTAGTCAAGTGTAATATGC+AGG | 0.531917 | 7.3:+24684538 | MS.gene033697:CDS |
| GCACTGTAACCAAGTAATGT+AGG | 0.533624 | 7.3:-24685693 | None:intergenic |
| CCAAAAGGTTCCTTAGGAGA+AGG | 0.534266 | 7.3:-24684419 | None:intergenic |
| GAAGAACCGTAGAGAAATGA+AGG | 0.537076 | 7.3:-24684290 | None:intergenic |
| GGACTTTAACAGCCTCGAAT+GGG | 0.537558 | 7.3:-24685863 | None:intergenic |
| TGTATTTGGCTGCATACTCA+GGG | 0.537672 | 7.3:-24685779 | None:intergenic |
| GTACAAGCAGCATAGAAAGC+AGG | 0.538163 | 7.3:-24684461 | None:intergenic |
| AAGCATCATATATTCCCCAC+TGG | 0.538260 | 7.3:-24687275 | None:intergenic |
| AACACTTACCGGAGCCCAGT+GGG | 0.541109 | 7.3:+24687260 | MS.gene033697:CDS |
| TATGCTGCTTGTACTGCTGG+TGG | 0.545880 | 7.3:+24684470 | MS.gene033697:CDS |
| CAAAGAATGAGTGCAGCAAA+GGG | 0.546393 | 7.3:+24686947 | MS.gene033697:CDS |
| CACTGTAACCAAGTAATGTA+GGG | 0.552514 | 7.3:-24685692 | None:intergenic |
| CCAAAATTTGTCAAGTCGGA+AGG | 0.555895 | 7.3:+24685933 | MS.gene033697:CDS |
| CCAAGACCTCTTGCAAAACC+GGG | 0.555939 | 7.3:-24685900 | None:intergenic |
| CGGACTTTAACAGCCTCGAA+TGG | 0.556736 | 7.3:-24685864 | None:intergenic |
| TGCTGGTTCAGCATCTGCTG+AGG | 0.562706 | 7.3:+24685818 | MS.gene033697:CDS |
| AGAAGGAATCATGAATCTAC+CGG | 0.563282 | 7.3:-24684402 | None:intergenic |
| TGCAGCAAAGGGCTGCAACT+TGG | 0.564769 | 7.3:+24686958 | MS.gene033697:CDS |
| GTCCGTGTTCAAACTCAGCC+CGG | 0.566951 | 7.3:+24685882 | MS.gene033697:CDS |
| CTTATAGATTTGCTCAACAA+TGG | 0.571646 | 7.3:-24686908 | None:intergenic |
| GCCGCGCCGCCTTCACTCCG+TGG | 0.578747 | 7.3:+24684371 | MS.gene033697:CDS |
| GTGTTCCAATCATAACAATA+CGG | 0.581864 | 7.3:-24687242 | None:intergenic |
| GATCCAGTTCCACGGAGTGA+AGG | 0.581952 | 7.3:-24684380 | None:intergenic |
| TGAACCAGCAAGGTAGATCA+AGG | 0.583686 | 7.3:-24685805 | None:intergenic |
| ATGCTTTCAAAGTCTTTGTG+GGG | 0.587996 | 7.3:+24687292 | MS.gene033697:CDS |
| AGCATCATATATTCCCCACT+GGG | 0.588188 | 7.3:-24687274 | None:intergenic |
| CGTTGTTCAGAAAAGAGACA+AGG | 0.592020 | 7.3:-24687047 | None:intergenic |
| GGAATCTGCCTTCCCCATAG+AGG | 0.592926 | 7.3:-24686101 | None:intergenic |
| CGATCTGGTGAATAACCGGT+AGG | 0.594124 | 7.3:-24684322 | None:intergenic |
| AATACGGAGAGGGAGACCTC+TGG | 0.599896 | 7.3:-24687226 | None:intergenic |
| GTGGTTGGTCTCTTCACCAG+AGG | 0.608443 | 7.3:+24687210 | MS.gene033697:CDS |
| GGCTGTTGCGAAGTTTGGTG+TGG | 0.612493 | 7.3:+24687191 | MS.gene033697:intron |
| GATTAGTGCCTCTATGGGGA+AGG | 0.612930 | 7.3:+24686093 | MS.gene033697:CDS |
| CCAGTTCCACGGAGTGAAGG+CGG | 0.613356 | 7.3:-24684377 | None:intergenic |
| AACGCCAAAGGAGCAACAGT+TGG | 0.613664 | 7.3:+24687066 | MS.gene033697:CDS |
| ACGGAGTGAAGGCGGCGCGG+CGG | 0.615971 | 7.3:-24684369 | None:intergenic |
| GCTCCCAAAATTTGTCAAGT+CGG | 0.621493 | 7.3:+24685929 | MS.gene033697:CDS |
| AGATGCTCTTGTACTTGGCA+GGG | 0.621873 | 7.3:-24685608 | None:intergenic |
| CAATCATAACAATACGGAGA+GGG | 0.625979 | 7.3:-24687236 | None:intergenic |
| TCAAGTCGGAAGGAGCTTTG+GGG | 0.630516 | 7.3:+24685943 | MS.gene033697:CDS |
| TTACACTTGACTAAGTCAAG+AGG | 0.631255 | 7.3:-24684530 | None:intergenic |
| TTACTTGGTTACAGTGCACA+GGG | 0.631543 | 7.3:+24685699 | MS.gene033697:CDS |
| TCCCATTGCAGAGATTGCAA+AGG | 0.636460 | 7.3:+24687430 | MS.gene033697:CDS |
| CAGCAGATGCTGAACCAGCA+AGG | 0.642348 | 7.3:-24685815 | None:intergenic |
| ATCTACCGGATCCAGTTCCA+CGG | 0.647055 | 7.3:-24684388 | None:intergenic |
| GCTGGTGGAATACTTAGCTG+TGG | 0.647800 | 7.3:+24684485 | MS.gene033697:CDS |
| GATCTGGTGAATAACCGGTA+GGG | 0.649771 | 7.3:-24684321 | None:intergenic |
| TATGATTGCAGGCTGTACAA+GGG | 0.654041 | 7.3:+24686071 | MS.gene033697:intron |
| TCCACGGAGTGAAGGCGGCG+CGG | 0.654298 | 7.3:-24684372 | None:intergenic |
| TTTGTTAGGCCAACAACCGG+TGG | 0.658305 | 7.3:+24687395 | MS.gene033697:intron |
| AACCGGGCTGAGTTTGAACA+CGG | 0.669826 | 7.3:-24685884 | None:intergenic |
| AGTACAAGAGCATCTCATCA+GGG | 0.671144 | 7.3:+24685616 | MS.gene033697:CDS |
| GTAATGTAGGGACCCATCCG+CGG | 0.692836 | 7.3:-24685680 | None:intergenic |
| GAACACTTACCGGAGCCCAG+TGG | 0.694776 | 7.3:+24687259 | MS.gene033697:CDS |
| AAGGGATTAGTGCCTCTATG+GGG | 0.721830 | 7.3:+24686089 | MS.gene033697:CDS |
| ACACTTACCGGAGCCCAGTG+GGG | 0.735878 | 7.3:+24687261 | MS.gene033697:CDS |
| CCAATCATAACAATACGGAG+AGG | 0.738908 | 7.3:-24687237 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTGTTATATTTGTT+AGG | + | chr7.3:24687381-24687400 | MS.gene033697:intron | 10.0% |
| !! | AAAATAACAAAAAAGGATTA+TGG | - | chr7.3:24686619-24686638 | None:intergenic | 15.0% |
| !! | AATTACTAGTATTGTTAAAC+TGG | + | chr7.3:24685492-24685511 | MS.gene033697:intron | 20.0% |
| !! | ACTAAATATATTATGATTGC+AGG | + | chr7.3:24686060-24686079 | MS.gene033697:intron | 20.0% |
| !! | ACTAATAAAATCGAAATTCT+AGG | - | chr7.3:24684816-24684835 | None:intergenic | 20.0% |
| !! | GCTGTTAAAATTTATCATTT+AGG | + | chr7.3:24686364-24686383 | MS.gene033697:intron | 20.0% |
| !! | TGTGATGAAATATTCATATT+TGG | + | chr7.3:24684959-24684978 | MS.gene033697:intron | 20.0% |
| !! | TGTTGAAGATTATTCATATT+TGG | + | chr7.3:24685227-24685246 | MS.gene033697:intron | 20.0% |
| !! | TTTGTAATAAATAGCATTTG+CGG | - | chr7.3:24685393-24685412 | None:intergenic | 20.0% |
| !!! | TGATATATTTGTTCTAAAGT+GGG | + | chr7.3:24687342-24687361 | MS.gene033697:intron | 20.0% |
| !!! | TTTTAGAAAATTCATTCAAG+AGG | + | chr7.3:24686413-24686432 | MS.gene033697:intron | 20.0% |
| ! | AAGAAAACTGCAAAATTCAA+TGG | - | chr7.3:24684869-24684888 | None:intergenic | 25.0% |
| ! | AATAGGAAGATAACTTATGA+TGG | + | chr7.3:24686793-24686812 | MS.gene033697:intron | 25.0% |
| ! | CTAAAGACATTCAAAAGAAT+GGG | - | chr7.3:24686470-24686489 | None:intergenic | 25.0% |
| ! | TAGAAGATATATGAGTAAGT+AGG | - | chr7.3:24686656-24686675 | None:intergenic | 25.0% |
| ! | TCTAAAGACATTCAAAAGAA+TGG | - | chr7.3:24686471-24686490 | None:intergenic | 25.0% |
| ! | TGAATGTTGTTGAATTGTTA+TGG | + | chr7.3:24684690-24684709 | MS.gene033697:intron | 25.0% |
| ! | TGATTGTGATACTGTTATAT+TGG | + | chr7.3:24684722-24684741 | MS.gene033697:intron | 25.0% |
| !! | TTATATCCTTGACAAACTTT+TGG | - | chr7.3:24686442-24686461 | None:intergenic | 25.0% |
| !!! | GCGATTTATGTTTGATTTTA+AGG | + | chr7.3:24684615-24684634 | MS.gene033697:intron | 25.0% |
| !!! | GTGATATATTTGTTCTAAAG+TGG | + | chr7.3:24687341-24687360 | MS.gene033697:intron | 25.0% |
| !!! | GTTTTACATGTCTTATTATC+AGG | - | chr7.3:24686836-24686855 | None:intergenic | 25.0% |
| !!! | TTTGATTTTTGTTGATCTAG+TGG | + | chr7.3:24684900-24684919 | MS.gene033697:intron | 25.0% |
| AAGTACTATTCTGATATTGC+TGG | + | chr7.3:24685756-24685775 | MS.gene033697:CDS | 30.0% | |
| ACAGCAAAAATATCAACAGA+CGG | - | chr7.3:24686349-24686368 | None:intergenic | 30.0% | |
| ATGATTCCTTCATTTCTCTA+CGG | + | chr7.3:24684284-24684303 | MS.gene033697:CDS | 30.0% | |
| CAAAAAAATGATGTGCAAAC+TGG | - | chr7.3:24686240-24686259 | None:intergenic | 30.0% | |
| CAAAATCTCAACAGAGTAAT+AGG | - | chr7.3:24685180-24685199 | None:intergenic | 30.0% | |
| CTCATTGGTATGAATATTGA+TGG | + | chr7.3:24686707-24686726 | MS.gene033697:intron | 30.0% | |
| CTTCAAATGTAGAACTTACA+TGG | - | chr7.3:24686125-24686144 | None:intergenic | 30.0% | |
| GTGTTCCAATCATAACAATA+CGG | - | chr7.3:24687245-24687264 | None:intergenic | 30.0% | |
| TAAAACTCATAAGTAGAAGC+AGG | - | chr7.3:24686398-24686417 | None:intergenic | 30.0% | |
| TAGGATTGGAATTGTTTAGT+TGG | + | chr7.3:24685530-24685549 | MS.gene033697:intron | 30.0% | |
| TGAGAAATGATGAAACTCAT+TGG | + | chr7.3:24686692-24686711 | MS.gene033697:intron | 30.0% | |
| TGTCATTATGTGTTACGAAT+AGG | + | chr7.3:24686776-24686795 | MS.gene033697:intron | 30.0% | |
| ! | AGATTCAGCAATTTAAGACT+AGG | - | chr7.3:24685431-24685450 | None:intergenic | 30.0% |
| ! | ATAACTTATGATGGAACCTA+AGG | + | chr7.3:24686802-24686821 | MS.gene033697:intron | 30.0% |
| ! | ATGAAGGAATCATGTTTCTA+CGG | - | chr7.3:24684277-24684296 | None:intergenic | 30.0% |
| ! | CTTATAGATTTGCTCAACAA+TGG | - | chr7.3:24686911-24686930 | None:intergenic | 30.0% |
| ! | TAACTTATGATGGAACCTAA+GGG | + | chr7.3:24686803-24686822 | MS.gene033697:intron | 30.0% |
| ! | TAGATCTGAGAAATGCTTTT+AGG | + | chr7.3:24684661-24684680 | MS.gene033697:intron | 30.0% |
| !! | AGTCTGTTGATATTTTGAGT+AGG | + | chr7.3:24684929-24684948 | MS.gene033697:intron | 30.0% |
| !! | CTTGTTGTATGTTAAGTTGA+AGG | + | chr7.3:24684772-24684791 | MS.gene033697:intron | 30.0% |
| !! | GGTGTTTATTTGATTTGTGA+TGG | + | chr7.3:24684636-24684655 | MS.gene033697:intron | 30.0% |
| !!! | TTGTCGTTTTTAATTACCAC+AGG | - | chr7.3:24685105-24685124 | None:intergenic | 30.0% |
| AGAAGGAATCATGAATCTAC+CGG | - | chr7.3:24684405-24684424 | None:intergenic | 35.0% | |
| ATCTATGCTAGGAATTAGGA+TGG | + | chr7.3:24686031-24686050 | MS.gene033697:intron | 35.0% | |
| ATGCTTTCAAAGTCTTTGTG+GGG | + | chr7.3:24687292-24687311 | MS.gene033697:CDS | 35.0% | |
| ATTCATGATTCCTTCTCCTA+AGG | + | chr7.3:24684409-24684428 | MS.gene033697:CDS | 35.0% | |
| CAATCATAACAATACGGAGA+GGG | - | chr7.3:24687239-24687258 | None:intergenic | 35.0% | |
| CACTGTAACCAAGTAATGTA+GGG | - | chr7.3:24685695-24685714 | None:intergenic | 35.0% | |
| CTTAGTCAAGTGTAATATGC+AGG | + | chr7.3:24684538-24684557 | MS.gene033697:CDS | 35.0% | |
| CTTGATCTATGCTAGGAATT+AGG | + | chr7.3:24686027-24686046 | MS.gene033697:intron | 35.0% | |
| GATGCTTTCAAAGTCTTTGT+GGG | + | chr7.3:24687291-24687310 | MS.gene033697:CDS | 35.0% | |
| GTTATGATTGGAACACTTAC+CGG | + | chr7.3:24687249-24687268 | MS.gene033697:CDS | 35.0% | |
| TAGGCAGCTAGAATAACAAA+AGG | - | chr7.3:24685161-24685180 | None:intergenic | 35.0% | |
| TCTATGCTAGGAATTAGGAT+GGG | + | chr7.3:24686032-24686051 | MS.gene033697:intron | 35.0% | |
| TGATGCTTTCAAAGTCTTTG+TGG | + | chr7.3:24687290-24687309 | MS.gene033697:CDS | 35.0% | |
| TGTTAAACTGGTTGTGTTGT+TGG | + | chr7.3:24685504-24685523 | MS.gene033697:intron | 35.0% | |
| TGTTATCTACTGTTTGATGC+AGG | + | chr7.3:24687170-24687189 | MS.gene033697:intron | 35.0% | |
| TTACACTTGACTAAGTCAAG+AGG | - | chr7.3:24684533-24684552 | None:intergenic | 35.0% | |
| ! | AACTTATGATGGAACCTAAG+GGG | + | chr7.3:24686804-24686823 | MS.gene033697:intron | 35.0% |
| ! | ATATTTGTTAGGCCAACAAC+CGG | + | chr7.3:24687392-24687411 | MS.gene033697:intron | 35.0% |
| ! | GCTTTTCTTCTTCGTTTTCT+TGG | + | chr7.3:24684565-24684584 | MS.gene033697:intron | 35.0% |
| ! | GTAGATCAAGGTCTTGTATT+TGG | - | chr7.3:24685796-24685815 | None:intergenic | 35.0% |
| !! | AATTGACTTGAAGTCCAACA+AGG | - | chr7.3:24686311-24686330 | None:intergenic | 35.0% |
| !! | CTTCCGACTTGACAAATTTT+GGG | - | chr7.3:24685935-24685954 | None:intergenic | 35.0% |
| AAAGAGACAAGGTTATCAGC+AGG | - | chr7.3:24687039-24687058 | None:intergenic | 40.0% | |
| AAGCATCATATATTCCCCAC+TGG | - | chr7.3:24687278-24687297 | None:intergenic | 40.0% | |
| AAGTTGAAGGATCGCTTGAT+TGG | + | chr7.3:24684785-24684804 | MS.gene033697:intron | 40.0% | |
| ACTGCAATATCCTTGTTGAC+TGG | + | chr7.3:24686162-24686181 | MS.gene033697:intron | 40.0% | |
| AGCATCATATATTCCCCACT+GGG | - | chr7.3:24687277-24687296 | None:intergenic | 40.0% | |
| AGGAAGCCAAAAGTTTGTCA+AGG | + | chr7.3:24686433-24686452 | MS.gene033697:intron | 40.0% | |
| ATCTTGCCAAAAGGTTCCTT+AGG | - | chr7.3:24684428-24684447 | None:intergenic | 40.0% | |
| ATTACTTGGTTACAGTGCAC+AGG | + | chr7.3:24685698-24685717 | MS.gene033697:CDS | 40.0% | |
| CAAAGAATGAGTGCAGCAAA+GGG | + | chr7.3:24686947-24686966 | MS.gene033697:CDS | 40.0% | |
| CCAAAATTTGTCAAGTCGGA+AGG | + | chr7.3:24685933-24685952 | MS.gene033697:CDS | 40.0% | |
| CCAATCATAACAATACGGAG+AGG | - | chr7.3:24687240-24687259 | None:intergenic | 40.0% | |
| CCTCTCCGTATTGTTATGAT+TGG | + | chr7.3:24687237-24687256 | MS.gene033697:CDS | 40.0% | |
| CGTTGTTCAGAAAAGAGACA+AGG | - | chr7.3:24687050-24687069 | None:intergenic | 40.0% | |
| CTCAACAATGGTCTCAAAAG+AGG | - | chr7.3:24686899-24686918 | None:intergenic | 40.0% | |
| GAAGAACCGTAGAGAAATGA+AGG | - | chr7.3:24684293-24684312 | None:intergenic | 40.0% | |
| GCACTGTAACCAAGTAATGT+AGG | - | chr7.3:24685696-24685715 | None:intergenic | 40.0% | |
| GCTCCCAAAATTTGTCAAGT+CGG | + | chr7.3:24685929-24685948 | MS.gene033697:CDS | 40.0% | |
| TACATCTCGATCTTGCCAAA+AGG | - | chr7.3:24684437-24684456 | None:intergenic | 40.0% | |
| TAGTTATGTAACACAGCCAC+CGG | + | chr7.3:24685051-24685070 | MS.gene033697:intron | 40.0% | |
| TATGATTGCAGGCTGTACAA+GGG | + | chr7.3:24686071-24686090 | MS.gene033697:intron | 40.0% | |
| TCCAACAAGGTAGTGTAACA+TGG | - | chr7.3:24686298-24686317 | None:intergenic | 40.0% | |
| TCCTTTGCAATCTCTGCAAT+GGG | - | chr7.3:24687434-24687453 | None:intergenic | 40.0% | |
| TGATGAGATGCTCTTGTACT+TGG | - | chr7.3:24685616-24685635 | None:intergenic | 40.0% | |
| TGCACTCATTCTTTGGTTGT+GGG | - | chr7.3:24686942-24686961 | None:intergenic | 40.0% | |
| TGTATTTGGCTGCATACTCA+GGG | - | chr7.3:24685782-24685801 | None:intergenic | 40.0% | |
| TGTTGCTCTTGATCTATGCT+AGG | + | chr7.3:24686020-24686039 | MS.gene033697:intron | 40.0% | |
| TTACTTGGTTACAGTGCACA+GGG | + | chr7.3:24685699-24685718 | MS.gene033697:CDS | 40.0% | |
| TTATCAGGTTTCAACCCCTT+AGG | - | chr7.3:24686821-24686840 | None:intergenic | 40.0% | |
| TTATGATTGCAGGCTGTACA+AGG | + | chr7.3:24686070-24686089 | MS.gene033697:intron | 40.0% | |
| TTCCTTTGCAATCTCTGCAA+TGG | - | chr7.3:24687435-24687454 | None:intergenic | 40.0% | |
| TTGTATTTGGCTGCATACTC+AGG | - | chr7.3:24685783-24685802 | None:intergenic | 40.0% | |
| ! | CTTCTTCGTTTTCTTGGATC+TGG | + | chr7.3:24684571-24684590 | MS.gene033697:intron | 40.0% |
| ! | TCTTTTCTGAACAACGCCAA+AGG | + | chr7.3:24687054-24687073 | MS.gene033697:CDS | 40.0% |
| ! | TTCAAAGTGTCCAGTCAACA+AGG | - | chr7.3:24686175-24686194 | None:intergenic | 40.0% |
| !! | AAGTACAAGAGCATCTCATC+AGG | + | chr7.3:24685615-24685634 | MS.gene033697:CDS | 40.0% |
| !! | AGTACAAGAGCATCTCATCA+GGG | + | chr7.3:24685616-24685635 | MS.gene033697:CDS | 40.0% |
| !! | CCTTCCGACTTGACAAATTT+TGG | - | chr7.3:24685936-24685955 | None:intergenic | 40.0% |
| !! | TGTGTTGTTGGTGTTAGGAT+TGG | + | chr7.3:24685516-24685535 | MS.gene033697:intron | 40.0% |
| !!! | AGGGTTTGGAGTTTTGTTCA+AGG | + | chr7.3:24685635-24685654 | MS.gene033697:CDS | 40.0% |
| AAGACCTTGATCTACCTTGC+TGG | + | chr7.3:24685801-24685820 | MS.gene033697:CDS | 45.0% | |
| ACCAAGACCTCTTGCAAAAC+CGG | - | chr7.3:24685904-24685923 | None:intergenic | 45.0% | |
| AGATGCTCTTGTACTTGGCA+GGG | - | chr7.3:24685611-24685630 | None:intergenic | 45.0% | |
| ATCACCAACTGTTGCTCCTT+TGG | - | chr7.3:24687073-24687092 | None:intergenic | 45.0% | |
| ATTCACCAGATCGTCAGTTC+CGG | + | chr7.3:24684332-24684351 | MS.gene033697:CDS | 45.0% | |
| CATTGACACATCTACACCTG+TGG | + | chr7.3:24685086-24685105 | MS.gene033697:intron | 45.0% | |
| CCAAAAGGTTCCTTAGGAGA+AGG | - | chr7.3:24684422-24684441 | None:intergenic | 45.0% | |
| CCAAAGAATGAGTGCAGCAA+AGG | + | chr7.3:24686946-24686965 | MS.gene033697:CDS | 45.0% | |
| CCTTTGCTGCACTCATTCTT+TGG | - | chr7.3:24686949-24686968 | None:intergenic | 45.0% | |
| CTCATTCTTTGGTTGTGGGA+TGG | - | chr7.3:24686938-24686957 | None:intergenic | 45.0% | |
| CTGACGATCTGGTGAATAAC+CGG | - | chr7.3:24684329-24684348 | None:intergenic | 45.0% | |
| CTGCACTCATTCTTTGGTTG+TGG | - | chr7.3:24686943-24686962 | None:intergenic | 45.0% | |
| GATCTGGTGAATAACCGGTA+GGG | - | chr7.3:24684324-24684343 | None:intergenic | 45.0% | |
| GCCATGTTACACTACCTTGT+TGG | + | chr7.3:24686294-24686313 | MS.gene033697:intron | 45.0% | |
| GGACTTTAACAGCCTCGAAT+GGG | - | chr7.3:24685866-24685885 | None:intergenic | 45.0% | |
| GTACAAGCAGCATAGAAAGC+AGG | - | chr7.3:24684464-24684483 | None:intergenic | 45.0% | |
| GTTACTTCCGTTACCATCTG+AGG | + | chr7.3:24686210-24686229 | MS.gene033697:intron | 45.0% | |
| TCCCATTGCAGAGATTGCAA+AGG | + | chr7.3:24687430-24687449 | MS.gene033697:CDS | 45.0% | |
| TGAACCAGCAAGGTAGATCA+AGG | - | chr7.3:24685808-24685827 | None:intergenic | 45.0% | |
| TGGAATGCCTCAGATGGTAA+CGG | - | chr7.3:24686220-24686239 | None:intergenic | 45.0% | |
| TTCAAGGAGCAGGGAGTTAA+GGG | + | chr7.3:24685651-24685670 | MS.gene033697:CDS | 45.0% | |
| TTCTTCCACCAAAACCCTAC+CGG | + | chr7.3:24684307-24684326 | MS.gene033697:CDS | 45.0% | |
| TTTGCAAGAGGTCTTGGTGA+TGG | + | chr7.3:24685906-24685925 | MS.gene033697:CDS | 45.0% | |
| ! | AAGGGATTAGTGCCTCTATG+GGG | + | chr7.3:24686089-24686108 | MS.gene033697:CDS | 45.0% |
| ! | ACAAGGGATTAGTGCCTCTA+TGG | + | chr7.3:24686087-24686106 | MS.gene033697:CDS | 45.0% |
| ! | CAAGGGATTAGTGCCTCTAT+GGG | + | chr7.3:24686088-24686107 | MS.gene033697:CDS | 45.0% |
| ! | CACAGGGTGCTTGCAAATTT+GGG | + | chr7.3:24685715-24685734 | MS.gene033697:CDS | 45.0% |
| ! | CCTTCTCCTAAGGAACCTTT+TGG | + | chr7.3:24684419-24684438 | MS.gene033697:CDS | 45.0% |
| ! | CTGGTTGTGTTGTTGGTGTT+AGG | + | chr7.3:24685511-24685530 | MS.gene033697:intron | 45.0% |
| ! | GTGAATAACCGGTAGGGTTT+TGG | - | chr7.3:24684318-24684337 | None:intergenic | 45.0% |
| ! | TTCTATGCTGCTTGTACTGC+TGG | + | chr7.3:24684467-24684486 | MS.gene033697:CDS | 45.0% |
| ! | TTGCAAGAGGTCTTGGTGAT+GGG | + | chr7.3:24685907-24685926 | MS.gene033697:CDS | 45.0% |
| ! | TTTGCTGGTGGATACATTGC+TGG | + | chr7.3:24686988-24687007 | MS.gene033697:CDS | 45.0% |
| !! | AAGAGCATCTCATCAGGGTT+TGG | + | chr7.3:24685621-24685640 | MS.gene033697:CDS | 45.0% |
| !! | AATAACCGGTAGGGTTTTGG+TGG | - | chr7.3:24684315-24684334 | None:intergenic | 45.0% |
| !!! | CAACTTGGTGTCAGTTTTGC+TGG | + | chr7.3:24686973-24686992 | MS.gene033697:CDS | 45.0% |
| !!! | GGAGTTTTGTTCAAGGAGCA+GGG | + | chr7.3:24685642-24685661 | MS.gene033697:CDS | 45.0% |
| !!! | TGGAGTTTTGTTCAAGGAGC+AGG | + | chr7.3:24685641-24685660 | MS.gene033697:CDS | 45.0% |
| !! | AAAAAAAAAAATAACAAAAA+AGG | - | chr7.3:24686626-24686645 | None:intergenic | 5.0% |
| !! | AATATAACAAAAAATTTATT+AGG | - | chr7.3:24687377-24687396 | None:intergenic | 5.0% |
| AACCGGGCTGAGTTTGAACA+CGG | - | chr7.3:24685887-24685906 | None:intergenic | 50.0% | |
| AACGCCAAAGGAGCAACAGT+TGG | + | chr7.3:24687066-24687085 | MS.gene033697:CDS | 50.0% | |
| ATATATTCCCCACTGGGCTC+CGG | - | chr7.3:24687271-24687290 | None:intergenic | 50.0% | |
| ATCTACCGGATCCAGTTCCA+CGG | - | chr7.3:24684391-24684410 | None:intergenic | 50.0% | |
| ATGCAGGCTGTTGCGAAGTT+TGG | + | chr7.3:24687186-24687205 | MS.gene033697:intron | 50.0% | |
| CCAAGACCTCTTGCAAAACC+GGG | - | chr7.3:24685903-24685922 | None:intergenic | 50.0% | |
| CGATCTGGTGAATAACCGGT+AGG | - | chr7.3:24684325-24684344 | None:intergenic | 50.0% | |
| CGGACTTTAACAGCCTCGAA+TGG | - | chr7.3:24685867-24685886 | None:intergenic | 50.0% | |
| GAGATGCTCTTGTACTTGGC+AGG | - | chr7.3:24685612-24685631 | None:intergenic | 50.0% | |
| GATTAGTGCCTCTATGGGGA+AGG | + | chr7.3:24686093-24686112 | MS.gene033697:CDS | 50.0% | |
| GCAAACTGGAATGCCTCAGA+TGG | - | chr7.3:24686226-24686245 | None:intergenic | 50.0% | |
| GCTGGTGGAATACTTAGCTG+TGG | + | chr7.3:24684485-24684504 | MS.gene033697:CDS | 50.0% | |
| GGATGGGTCCCTACATTACT+TGG | + | chr7.3:24685684-24685703 | MS.gene033697:CDS | 50.0% | |
| GTCAAGTCGGAAGGAGCTTT+GGG | + | chr7.3:24685942-24685961 | MS.gene033697:CDS | 50.0% | |
| GTTCAAGGAGCAGGGAGTTA+AGG | + | chr7.3:24685650-24685669 | MS.gene033697:CDS | 50.0% | |
| TCAAGTCGGAAGGAGCTTTG+GGG | + | chr7.3:24685943-24685962 | MS.gene033697:CDS | 50.0% | |
| TGTCAAGTCGGAAGGAGCTT+TGG | + | chr7.3:24685941-24685960 | MS.gene033697:CDS | 50.0% | |
| TTTGTTAGGCCAACAACCGG+TGG | + | chr7.3:24687395-24687414 | MS.gene033697:intron | 50.0% | |
| ! | GCACAGGGTGCTTGCAAATT+TGG | + | chr7.3:24685714-24685733 | MS.gene033697:CDS | 50.0% |
| ! | TATGCTGCTTGTACTGCTGG+TGG | + | chr7.3:24684470-24684489 | MS.gene033697:CDS | 50.0% |
| !! | GGAGTTAAGGGCTTTTTCCG+CGG | + | chr7.3:24685663-24685682 | MS.gene033697:CDS | 50.0% |
| !! | GTTGCGAAGTTTGGTGTGGT+TGG | + | chr7.3:24687195-24687214 | MS.gene033697:CDS | 50.0% |
| !! | TAAGGGCTTTTTCCGCGGAT+GGG | + | chr7.3:24685668-24685687 | MS.gene033697:CDS | 50.0% |
| !! | TTAAGGGCTTTTTCCGCGGA+TGG | + | chr7.3:24685667-24685686 | MS.gene033697:CDS | 50.0% |
| !!! | CTTGGTGTCAGTTTTGCTGG+TGG | + | chr7.3:24686976-24686995 | MS.gene033697:CDS | 50.0% |
| AACACTTACCGGAGCCCAGT+GGG | + | chr7.3:24687260-24687279 | MS.gene033697:CDS | 55.0% | |
| AATACGGAGAGGGAGACCTC+TGG | - | chr7.3:24687229-24687248 | None:intergenic | 55.0% | |
| CAGCAGATGCTGAACCAGCA+AGG | - | chr7.3:24685818-24685837 | None:intergenic | 55.0% | |
| CGTTGCACTTTGCCCATTCG+AGG | + | chr7.3:24685851-24685870 | MS.gene033697:CDS | 55.0% | |
| GATCCAGTTCCACGGAGTGA+AGG | - | chr7.3:24684383-24684402 | None:intergenic | 55.0% | |
| GCAATCTCTGCAATGGGAGC+AGG | - | chr7.3:24687428-24687447 | None:intergenic | 55.0% | |
| GGAATCTGCCTTCCCCATAG+AGG | - | chr7.3:24686104-24686123 | None:intergenic | 55.0% | |
| GTAATGTAGGGACCCATCCG+CGG | - | chr7.3:24685683-24685702 | None:intergenic | 55.0% | |
| GTCAATGACCGTGTCGTGAC+CGG | - | chr7.3:24685073-24685092 | None:intergenic | 55.0% | |
| GTCCGTGTTCAAACTCAGCC+CGG | + | chr7.3:24685882-24685901 | MS.gene033697:CDS | 55.0% | |
| TCACTCCGTGGAACTGGATC+CGG | + | chr7.3:24684383-24684402 | MS.gene033697:CDS | 55.0% | |
| TGCAGCAAAGGGCTGCAACT+TGG | + | chr7.3:24686958-24686977 | MS.gene033697:CDS | 55.0% | |
| ! | ACTCAGCCCGGTTTTGCAAG+AGG | + | chr7.3:24685894-24685913 | MS.gene033697:CDS | 55.0% |
| ! | CCCGGTTTTGCAAGAGGTCT+TGG | + | chr7.3:24685900-24685919 | MS.gene033697:CDS | 55.0% |
| ! | GGCTGTTGCGAAGTTTGGTG+TGG | + | chr7.3:24687191-24687210 | MS.gene033697:intron | 55.0% |
| !! | GTGGTTGGTCTCTTCACCAG+AGG | + | chr7.3:24687210-24687229 | MS.gene033697:CDS | 55.0% |
| !! | TGCTGGTTCAGCATCTGCTG+AGG | + | chr7.3:24685818-24685837 | MS.gene033697:CDS | 55.0% |
| AATGACCGTGTCGTGACCGG+TGG | - | chr7.3:24685070-24685089 | None:intergenic | 60.0% | |
| ACACTTACCGGAGCCCAGTG+GGG | + | chr7.3:24687261-24687280 | MS.gene033697:CDS | 60.0% | |
| CCAGTTCCACGGAGTGAAGG+CGG | - | chr7.3:24684380-24684399 | None:intergenic | 60.0% | |
| GAACACTTACCGGAGCCCAG+TGG | + | chr7.3:24687259-24687278 | MS.gene033697:CDS | 60.0% | |
| CACAGCCACCGGTCACGACA+CGG | + | chr7.3:24685062-24685081 | MS.gene033697:intron | 65.0% | |
| CCGCCTTCACTCCGTGGAAC+TGG | + | chr7.3:24684377-24684396 | MS.gene033697:CDS | 65.0% | |
| CGGGACCGGAACTGACGATC+TGG | - | chr7.3:24684340-24684359 | None:intergenic | 65.0% | |
| ! | GGAGCAGCACCACCGGTTGT+TGG | - | chr7.3:24687407-24687426 | None:intergenic | 65.0% |
| GGGAGCAGGAGCAGCACCAC+CGG | - | chr7.3:24687414-24687433 | None:intergenic | 70.0% | |
| TCCACGGAGTGAAGGCGGCG+CGG | - | chr7.3:24684375-24684394 | None:intergenic | 70.0% | |
| ACGGAGTGAAGGCGGCGCGG+CGG | - | chr7.3:24684372-24684391 | None:intergenic | 75.0% | |
| ! | GAGTGAAGGCGGCGCGGCGG+CGG | - | chr7.3:24684369-24684388 | None:intergenic | 80.0% |
| ! | GCCGCGCCGCCTTCACTCCG+TGG | + | chr7.3:24684371-24684390 | MS.gene033697:CDS | 80.0% |
| ! | GGCGGCGGAAGGAGCGGGAC+CGG | - | chr7.3:24684354-24684373 | None:intergenic | 80.0% |
| ! | CGGCGCGGCGGCGGAAGGAG+CGG | - | chr7.3:24684360-24684379 | None:intergenic | 85.0% |
| ! | GAAGGCGGCGCGGCGGCGGA+AGG | - | chr7.3:24684365-24684384 | None:intergenic | 85.0% |
| ! | GGCGCGGCGGCGGAAGGAGC+GGG | - | chr7.3:24684359-24684378 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 24684248 | 24687457 | 24684248 | ID=MS.gene033697 |
| chr7.3 | mRNA | 24684248 | 24687457 | 24684248 | ID=MS.gene033697.t1;Parent=MS.gene033697 |
| chr7.3 | exon | 24684248 | 24684559 | 24684248 | ID=MS.gene033697.t1.exon1;Parent=MS.gene033697.t1 |
| chr7.3 | CDS | 24684248 | 24684559 | 24684248 | ID=cds.MS.gene033697.t1;Parent=MS.gene033697.t1 |
| chr7.3 | exon | 24685603 | 24685964 | 24685603 | ID=MS.gene033697.t1.exon2;Parent=MS.gene033697.t1 |
| chr7.3 | CDS | 24685603 | 24685964 | 24685603 | ID=cds.MS.gene033697.t1;Parent=MS.gene033697.t1 |
| chr7.3 | exon | 24686082 | 24686125 | 24686082 | ID=MS.gene033697.t1.exon3;Parent=MS.gene033697.t1 |
| chr7.3 | CDS | 24686082 | 24686125 | 24686082 | ID=cds.MS.gene033697.t1;Parent=MS.gene033697.t1 |
| chr7.3 | exon | 24686878 | 24687092 | 24686878 | ID=MS.gene033697.t1.exon4;Parent=MS.gene033697.t1 |
| chr7.3 | CDS | 24686878 | 24687092 | 24686878 | ID=cds.MS.gene033697.t1;Parent=MS.gene033697.t1 |
| chr7.3 | exon | 24687192 | 24687316 | 24687192 | ID=MS.gene033697.t1.exon5;Parent=MS.gene033697.t1 |
| chr7.3 | CDS | 24687192 | 24687316 | 24687192 | ID=cds.MS.gene033697.t1;Parent=MS.gene033697.t1 |
| chr7.3 | exon | 24687403 | 24687457 | 24687403 | ID=MS.gene033697.t1.exon6;Parent=MS.gene033697.t1 |
| chr7.3 | CDS | 24687403 | 24687457 | 24687403 | ID=cds.MS.gene033697.t1;Parent=MS.gene033697.t1 |
| Gene Sequence |
| Protein sequence |
