Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034103.t1 | XP_003604353.1 | 98.3 | 519 | 9 | 0 | 1 | 519 | 1 | 519 | 2.40E-296 | 1027.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034103.t1 | Q9M8L4 | 78.0 | 522 | 112 | 1 | 1 | 519 | 1 | 522 | 1.8e-244 | 846.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034103.t1 | G7JGV7 | 98.3 | 519 | 9 | 0 | 1 | 519 | 1 | 519 | 1.8e-296 | 1027.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene034103 | MS.gene70587 | PPI |
| MS.gene034103 | MS.gene074392 | PPI |
| MS.gene022257 | MS.gene034103 | PPI |
| MS.gene034103 | MS.gene25914 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034103.t1 | MTR_4g009920 | 98.266 | 519 | 9 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1048 |
| MS.gene034103.t1 | MTR_4g009920 | 98.225 | 507 | 9 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1026 |
| MS.gene034103.t1 | MTR_4g009900 | 42.453 | 106 | 27 | 4 | 309 | 413 | 60 | 132 | 1.22e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034103.t1 | AT1G80460 | 77.969 | 522 | 112 | 1 | 1 | 519 | 1 | 522 | 0.0 | 832 |
| MS.gene034103.t1 | AT1G80460 | 71.839 | 522 | 104 | 2 | 1 | 519 | 1 | 482 | 0.0 | 771 |
Find 115 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATAGACACTTGGTTGATT+TGG | 0.226109 | 4.4:-89278276 | MS.gene034103:CDS |
| GATTCAATGCACAAAGATTC+TGG | 0.239459 | 4.4:-89277581 | MS.gene034103:CDS |
| CCGGATTAGCTGTTGGGATT+TGG | 0.260537 | 4.4:-89276901 | MS.gene034103:CDS |
| CTCTTCACAATGCTCTTGTT+TGG | 0.272363 | 4.4:-89279555 | MS.gene034103:CDS |
| GGATCCTTCGAGTGCATAAT+TGG | 0.273560 | 4.4:+89277865 | None:intergenic |
| ATTATAGGCAATGTTTCTTC+TGG | 0.283345 | 4.4:-89278091 | MS.gene034103:CDS |
| GCATGATCCAATGGAGATAT+TGG | 0.330740 | 4.4:-89279716 | MS.gene034103:CDS |
| TCTTCTGGATGGCCAGTTGC+TGG | 0.334542 | 4.4:-89278076 | MS.gene034103:CDS |
| GCACTGAAATATGTGCTAAT+AGG | 0.336748 | 4.4:+89278376 | None:intergenic |
| ATCAGTAATTCAGAAATTAT+AGG | 0.336952 | 4.4:-89278106 | MS.gene034103:CDS |
| TTCGTACTACCTCTGTTTGC+AGG | 0.343790 | 4.4:-89279525 | MS.gene034103:intron |
| TAGGTTCATCAGCATTGTTC+GGG | 0.358557 | 4.4:+89278198 | None:intergenic |
| TATAGAGGCTCTGGCATTAG+AGG | 0.360156 | 4.4:-89277774 | MS.gene034103:CDS |
| AAAGAGAGACTACTCTTGTT+TGG | 0.360374 | 4.4:-89279597 | MS.gene034103:CDS |
| TTAGGTTCATCAGCATTGTT+CGG | 0.360447 | 4.4:+89278197 | None:intergenic |
| ATCCCAATCGCTGGATGTTT+AGG | 0.365473 | 4.4:-89278052 | MS.gene034103:CDS |
| CTCTAATGGTTGAAGAAAAT+AGG | 0.366750 | 4.4:-89276820 | MS.gene034103:CDS |
| CATTACCAAGGCAGTGGATA+AGG | 0.374568 | 4.4:-89279677 | MS.gene034103:CDS |
| TTTGAAACTTCTGTGGTTGA+TGG | 0.380869 | 4.4:-89278353 | MS.gene034103:CDS |
| GCATAATTGGTTGGAGCATT+CGG | 0.386294 | 4.4:+89277878 | None:intergenic |
| GAAGGATCCGTTGCTATTGC+TGG | 0.386324 | 4.4:-89277851 | MS.gene034103:CDS |
| TGGTTGATTTGGAACTTAAC+CGG | 0.394053 | 4.4:-89278265 | MS.gene034103:CDS |
| CCAAATCCCAACAGCTAATC+CGG | 0.396390 | 4.4:+89276901 | None:intergenic |
| TGTTGGGCAGGCGGATTTGT+TGG | 0.401082 | 4.4:-89276984 | MS.gene034103:intron |
| GATAAATCAGCTAAACCAAT+TGG | 0.412511 | 4.4:-89280768 | MS.gene034103:CDS |
| TTGGACAAGCGTGCCGTAAA+GGG | 0.413690 | 4.4:-89278009 | MS.gene034103:CDS |
| GACAAAGGATTGAAAGCTAT+TGG | 0.414357 | 4.4:-89279631 | MS.gene034103:CDS |
| TTGCTGGAGCTGCGGTGCAG+TGG | 0.423140 | 4.4:-89277835 | MS.gene034103:CDS |
| ATGCAGCCGGATTAGCTGTT+GGG | 0.423707 | 4.4:-89276907 | MS.gene034103:CDS |
| TGCTAAAGATATAGAGGCTC+TGG | 0.423985 | 4.4:-89277783 | MS.gene034103:CDS |
| ATCTGCTACTGCTTGTTCCT+TGG | 0.424132 | 4.4:+89280802 | None:intergenic |
| TGGGATTTGAAGTGCTTTCA+AGG | 0.425709 | 4.4:+89278150 | None:intergenic |
| AAGAGTAGTCTCTCTTTGAT+TGG | 0.427095 | 4.4:+89279603 | None:intergenic |
| CTTGGACAAGCGTGCCGTAA+AGG | 0.431970 | 4.4:-89278010 | MS.gene034103:CDS |
| TGTTGCCTTATCCACTGCCT+TGG | 0.460974 | 4.4:+89279672 | None:intergenic |
| TCACAATGCTCTTGTTTGGA+TGG | 0.461624 | 4.4:-89279551 | MS.gene034103:CDS |
| GATCAACATGCGGCAATGCT+TGG | 0.462984 | 4.4:-89278028 | MS.gene034103:CDS |
| TACAAATGCTAAAGATATAG+AGG | 0.466654 | 4.4:-89277789 | MS.gene034103:CDS |
| CACCTAAACATCCAGCGATT+GGG | 0.469707 | 4.4:+89278050 | None:intergenic |
| TTGAAACAGGAGACTGGAAA+AGG | 0.470396 | 4.4:-89278443 | MS.gene034103:intron |
| TCAACTTGATGAGATCCAAT+TGG | 0.485313 | 4.4:+89280753 | None:intergenic |
| AGACTGGAAAAGGAGTTATC+TGG | 0.485413 | 4.4:-89278433 | MS.gene034103:CDS |
| GGTAGATTCATCCCAGTTGA+GGG | 0.489859 | 4.4:+89278171 | None:intergenic |
| TCAACTATAGCTTATAAGCT+TGG | 0.494881 | 4.4:-89277902 | MS.gene034103:CDS |
| GCTGTTGTTTCAATGTCAGC+TGG | 0.495390 | 4.4:+89276944 | None:intergenic |
| TAGGCAATGTTTCTTCTGGA+TGG | 0.500957 | 4.4:-89278087 | MS.gene034103:CDS |
| ACACTCTCCAATATCTCCAT+TGG | 0.503678 | 4.4:+89279709 | None:intergenic |
| CAGTGGCTTAGAGATGGTCT+TGG | 0.511553 | 4.4:-89277818 | MS.gene034103:CDS |
| TACTTCGTTCCTGCCTTCAA+CGG | 0.512729 | 4.4:-89277731 | MS.gene034103:CDS |
| TCACCTAAACATCCAGCGAT+TGG | 0.515930 | 4.4:+89278049 | None:intergenic |
| GACATTGAAACAACAGCACT+TGG | 0.517787 | 4.4:-89276938 | MS.gene034103:CDS |
| GCGATTGGGATACCAGCAAC+TGG | 0.520352 | 4.4:+89278064 | None:intergenic |
| CAATCCTCCTTTCACTCCAC+CGG | 0.520536 | 4.4:+89278246 | None:intergenic |
| CGGAGCAAACAATCCGTTGA+AGG | 0.521467 | 4.4:+89277718 | None:intergenic |
| AACTTAACCGGTGGAGTGAA+AGG | 0.522805 | 4.4:-89278253 | MS.gene034103:CDS |
| GCTTTCATTCTACTGAATAC+CGG | 0.525684 | 4.4:-89277959 | MS.gene034103:CDS |
| AGGTAGATTCATCCCAGTTG+AGG | 0.526716 | 4.4:+89278170 | None:intergenic |
| ATTCATAATTACCCTGCTTG+TGG | 0.528009 | 4.4:+89280714 | None:intergenic |
| CCTTCGAGTGCATAATTGGT+TGG | 0.530517 | 4.4:+89277869 | None:intergenic |
| CTTGGAGCAGCCTATGCAGC+CGG | 0.534264 | 4.4:-89276920 | MS.gene034103:CDS |
| ACTCAGTTCTATCCACAAGC+AGG | 0.534411 | 4.4:-89280726 | MS.gene034103:CDS |
| CAACCTCTTGATGCAGACTC+AGG | 0.539217 | 4.4:-89277498 | MS.gene034103:intron |
| GCAAACAATCCGTTGAAGGC+AGG | 0.539309 | 4.4:+89277722 | None:intergenic |
| AACGAAGTAAACACCACCAT+TGG | 0.540620 | 4.4:+89277745 | None:intergenic |
| GTGGATAAGGCAACAGCTGA+TGG | 0.545692 | 4.4:-89279664 | MS.gene034103:CDS |
| GCTAAAAGTACGTATGGTAC+AGG | 0.547345 | 4.4:-89277983 | MS.gene034103:CDS |
| GTTGCTGGTATCCCAATCGC+TGG | 0.548254 | 4.4:-89278061 | MS.gene034103:CDS |
| GGTTTGCATTACCAAGGCAG+TGG | 0.553429 | 4.4:-89279683 | MS.gene034103:CDS |
| TGATTTAACTACTCCTTCGC+CGG | 0.553584 | 4.4:+89277940 | None:intergenic |
| AACAGCTAATCCGGCTGCAT+AGG | 0.557636 | 4.4:+89276910 | None:intergenic |
| CGTTGCTATTGCTGGAGCTG+CGG | 0.558953 | 4.4:-89277843 | MS.gene034103:CDS |
| GGGGAGGCTAAAAGTACGTA+TGG | 0.562365 | 4.4:-89277989 | MS.gene034103:CDS |
| TCAGTGCTTTGAAACTTCTG+TGG | 0.564226 | 4.4:-89278360 | MS.gene034103:CDS |
| TGTTTGGAACAATAGACACT+TGG | 0.574976 | 4.4:-89278285 | MS.gene034103:CDS |
| TATGCAGCCGGATTAGCTGT+TGG | 0.578831 | 4.4:-89276908 | MS.gene034103:CDS |
| TTCATTGGTGCAATTGACCA+AGG | 0.579046 | 4.4:-89280819 | MS.gene034103:CDS |
| CTTGTTTGGAGCAAATCCAC+TGG | 0.582009 | 4.4:-89279583 | MS.gene034103:CDS |
| TGGACAAGCGTGCCGTAAAG+GGG | 0.584821 | 4.4:-89278008 | MS.gene034103:CDS |
| CGCAGCTCCAGCAATAGCAA+CGG | 0.585543 | 4.4:+89277844 | None:intergenic |
| GCGGTGCAGTGGCTTAGAGA+TGG | 0.585645 | 4.4:-89277824 | MS.gene034103:CDS |
| TTTCTTCAACCATTAGAGGA+CGG | 0.587520 | 4.4:+89276825 | None:intergenic |
| AAAACATATGCTCTCAAGCA+CGG | 0.589815 | 4.4:+89277622 | None:intergenic |
| AATAACAAGGTATACTAGCA+AGG | 0.590541 | 4.4:-89277660 | MS.gene034103:CDS |
| ACGGATTGTTTGCTCCGTGG+TGG | 0.592208 | 4.4:-89277712 | MS.gene034103:CDS |
| GGAAAATGTGGATGCTGTCA+AGG | 0.594676 | 4.4:-89278332 | MS.gene034103:CDS |
| CAAACAAGAGCATTGTGAAG+AGG | 0.598923 | 4.4:+89279556 | None:intergenic |
| TCAACGGATTGTTTGCTCCG+TGG | 0.599214 | 4.4:-89277715 | MS.gene034103:CDS |
| ATGGGTGGAGCATGATCCAA+TGG | 0.600525 | 4.4:-89279725 | MS.gene034103:CDS |
| AAACCTGAGTCTGCATCAAG+AGG | 0.602107 | 4.4:+89277495 | None:intergenic |
| GGAGATATTGGAGAGTGTGA+AGG | 0.603088 | 4.4:-89279704 | MS.gene034103:CDS |
| TATAAGCTATAGTTGACAGA+AGG | 0.613391 | 4.4:+89277909 | None:intergenic |
| CTCAGTTCTATCCACAAGCA+GGG | 0.613869 | 4.4:-89280725 | MS.gene034103:intron |
| GATGCTCGTGGGATTTGTAT+CGG | 0.615161 | 4.4:-89277683 | MS.gene034103:CDS |
| TCTGTGGTTGATGGAAAATG+TGG | 0.618354 | 4.4:-89278344 | MS.gene034103:CDS |
| CTATAGTTGACAGAAGGCCA+TGG | 0.621798 | 4.4:+89277915 | None:intergenic |
| GCATTAGAGGTAGAATCCAA+TGG | 0.626496 | 4.4:-89277761 | MS.gene034103:CDS |
| ATTCTACTGAATACCGGCGA+AGG | 0.627934 | 4.4:-89277953 | MS.gene034103:CDS |
| CTGGAAAAGGAGTTATCTGG+TGG | 0.628620 | 4.4:-89278430 | MS.gene034103:CDS |
| TTGTTGATTTAACAGATGGG+TGG | 0.628858 | 4.4:-89279740 | MS.gene034103:intron |
| GATGGATTCAATGTGGACAA+AGG | 0.629833 | 4.4:-89279646 | MS.gene034103:CDS |
| TGTGAAGGTTTGCATTACCA+AGG | 0.634692 | 4.4:-89279689 | MS.gene034103:CDS |
| CCAACCAATTATGCACTCGA+AGG | 0.641638 | 4.4:-89277869 | MS.gene034103:CDS |
| TGGTGGCGTGATGATGCTCG+TGG | 0.642857 | 4.4:-89277695 | MS.gene034103:CDS |
| GGAGTAGTTAAATCAAACCA+TGG | 0.660899 | 4.4:-89277932 | MS.gene034103:CDS |
| GGTGGCGTGATGATGCTCGT+GGG | 0.662938 | 4.4:-89277694 | MS.gene034103:CDS |
| ATTGTGAAGAGGAGCACCAG+TGG | 0.665290 | 4.4:+89279567 | None:intergenic |
| ACAAGCGTGCCGTAAAGGGG+AGG | 0.668849 | 4.4:-89278005 | MS.gene034103:CDS |
| CGAGCATCATCACGCCACCA+CGG | 0.670243 | 4.4:+89277698 | None:intergenic |
| AAAAGAGGACCTGCAAACAG+AGG | 0.674216 | 4.4:+89279516 | None:intergenic |
| TTGATTTGGAACTTAACCGG+TGG | 0.677686 | 4.4:-89278262 | MS.gene034103:CDS |
| GGATTTGTATCGGAATAACA+AGG | 0.684634 | 4.4:-89277673 | MS.gene034103:CDS |
| TTAACCGGTGGAGTGAAAGG+AGG | 0.687751 | 4.4:-89278250 | MS.gene034103:CDS |
| ATGTTTAGGTGATCAACATG+CGG | 0.705152 | 4.4:-89278038 | MS.gene034103:CDS |
| AACAGCTGATGGATTCAATG+TGG | 0.722250 | 4.4:-89279653 | MS.gene034103:CDS |
| TTAGAGGTAGAATCCAATGG+TGG | 0.726999 | 4.4:-89277758 | MS.gene034103:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTGAAAATTTTGAT+GGG | - | chr4.4:89276918-89276937 | MS.gene034103:CDS | 10.0% |
| !!! | TTTTTTATTGAAAATTTTGA+TGG | - | chr4.4:89276917-89276936 | MS.gene034103:CDS | 10.0% |
| !! | AAAGAGAAAAAGAAAAATAA+GGG | - | chr4.4:89280452-89280471 | MS.gene034103:intron | 15.0% |
| !! | CAATAAAAAAAACAAAAAAG+AGG | + | chr4.4:89276907-89276926 | None:intergenic | 15.0% |
| !! | TCATTGTGAATAATAAAAAT+AGG | - | chr4.4:89278545-89278564 | MS.gene034103:intron | 15.0% |
| !! | TTTACAATTAAAACAAAGAT+AGG | + | chr4.4:89277782-89277801 | None:intergenic | 15.0% |
| !!! | ATTTTGTTGAAAATATTGAT+GGG | - | chr4.4:89277737-89277756 | MS.gene034103:CDS | 15.0% |
| !!! | ATTTTTATTATTCACAATGA+TGG | + | chr4.4:89278545-89278564 | None:intergenic | 15.0% |
| !!! | TATTTTGTTGAAAATATTGA+TGG | - | chr4.4:89277736-89277755 | MS.gene034103:CDS | 15.0% |
| !!! | TTATTTTTTCAAGTAAAGAA+AGG | + | chr4.4:89280305-89280324 | None:intergenic | 15.0% |
| !!! | TTGTTGTGTTTTTATAATTA+TGG | - | chr4.4:89276942-89276961 | MS.gene034103:CDS | 15.0% |
| !!! | TTTGTTGTATTTTGTAATTA+TGG | - | chr4.4:89277013-89277032 | MS.gene034103:intron | 15.0% |
| !! | ATCAGTAATTCAGAAATTAT+AGG | - | chr4.4:89279482-89279501 | MS.gene034103:intron | 20.0% |
| !! | ATGATCTATATAATGAAATC+AGG | + | chr4.4:89278909-89278928 | None:intergenic | 20.0% |
| !! | CAAAGAGAAAAAGAAAAATA+AGG | - | chr4.4:89280451-89280470 | MS.gene034103:intron | 20.0% |
| !! | CTTCAAATTAAATATGTATC+CGG | + | chr4.4:89278264-89278283 | None:intergenic | 20.0% |
| !! | GTTATATATACCAATATCAA+GGG | - | chr4.4:89280350-89280369 | MS.gene034103:intron | 20.0% |
| !! | TATCGAAAAGATAGAAAATA+TGG | + | chr4.4:89280167-89280186 | None:intergenic | 20.0% |
| !! | TGTTATATATACCAATATCA+AGG | - | chr4.4:89280349-89280368 | MS.gene034103:intron | 20.0% |
| !! | TTGACAATAATTTGAGAAAA+TGG | - | chr4.4:89278206-89278225 | MS.gene034103:CDS | 20.0% |
| !! | TTGTAAATCTGATACATTAA+TGG | + | chr4.4:89277352-89277371 | None:intergenic | 20.0% |
| !!! | AAACAAAATAGTCTTAATAG+AGG | + | chr4.4:89280406-89280425 | None:intergenic | 20.0% |
| !!! | AACAAAATAGTCTTAATAGA+GGG | + | chr4.4:89280405-89280424 | None:intergenic | 20.0% |
| !!! | AACTATCAAAAGACAAATTT+TGG | + | chr4.4:89277400-89277419 | None:intergenic | 20.0% |
| !!! | AGAATTTTTGTTGATAATGT+TGG | - | chr4.4:89280587-89280606 | MS.gene034103:intron | 20.0% |
| !!! | GAATTTTTGTTGATAATGTT+GGG | - | chr4.4:89280588-89280607 | MS.gene034103:intron | 20.0% |
| !!! | GATGTTATTATTTTTGAAAC+AGG | - | chr4.4:89279132-89279151 | MS.gene034103:intron | 20.0% |
| !!! | TATTAGTGAATATTTTTCCT+TGG | + | chr4.4:89278842-89278861 | None:intergenic | 20.0% |
| !!! | TCTGAATTACTGATAATTTT+AGG | + | chr4.4:89279476-89279495 | None:intergenic | 20.0% |
| !!! | TTAAAAAGTGATCGATTTAA+GGG | + | chr4.4:89278682-89278701 | None:intergenic | 20.0% |
| !!! | TTTAAAAAGTGATCGATTTA+AGG | + | chr4.4:89278683-89278702 | None:intergenic | 20.0% |
| !!! | TTTGAATCTTGTTTGATTAT+GGG | - | chr4.4:89278572-89278591 | MS.gene034103:intron | 20.0% |
| !!! | TTTTCTTTTTCTCTTTGATT+GGG | + | chr4.4:89280448-89280467 | None:intergenic | 20.0% |
| !!! | TTTTGATTGCAAATTTTGAT+GGG | - | chr4.4:89277073-89277092 | MS.gene034103:intron | 20.0% |
| !!! | TTTTTCTTTTTCTCTTTGAT+TGG | + | chr4.4:89280449-89280468 | None:intergenic | 20.0% |
| !!! | TTTTTGATTGCAAATTTTGA+TGG | - | chr4.4:89277072-89277091 | MS.gene034103:intron | 20.0% |
| ! | AAAAAGAAAGTAGATTGTTG+GGG | - | chr4.4:89280791-89280810 | MS.gene034103:CDS | 25.0% |
| ! | AAGAAAAAAGATGCATTGTT+TGG | - | chr4.4:89279287-89279306 | MS.gene034103:intron | 25.0% |
| ! | AGTAAGAAGAAGAATAAAAG+AGG | + | chr4.4:89278090-89278109 | None:intergenic | 25.0% |
| ! | ATCTATATAATGAAATCAGG+AGG | + | chr4.4:89278906-89278925 | None:intergenic | 25.0% |
| ! | ATTTATCCAAACATAGAGAA+TGG | + | chr4.4:89278637-89278656 | None:intergenic | 25.0% |
| ! | CAGAAAATGTTTATCTTGAT+AGG | - | chr4.4:89280522-89280541 | MS.gene034103:intron | 25.0% |
| ! | GAAAAAGAAAGTAGATTGTT+GGG | - | chr4.4:89280790-89280809 | MS.gene034103:CDS | 25.0% |
| ! | GAAAATATGGAACTAAATGA+AGG | + | chr4.4:89280154-89280173 | None:intergenic | 25.0% |
| ! | TAAATTTGTCTTTCAGTAGT+CGG | - | chr4.4:89277204-89277223 | MS.gene034103:intron | 25.0% |
| ! | TACAAATGCTAAAGATATAG+AGG | - | chr4.4:89279799-89279818 | MS.gene034103:intron | 25.0% |
| ! | TCTATATAATGAAATCAGGA+GGG | + | chr4.4:89278905-89278924 | None:intergenic | 25.0% |
| ! | TGATACTCTCTTTATCTATA+AGG | + | chr4.4:89278817-89278836 | None:intergenic | 25.0% |
| ! | TTGATTTCTTGTAAGCAAAA+AGG | - | chr4.4:89278308-89278327 | MS.gene034103:CDS | 25.0% |
| ! | TTTACGACAAAAACAAACAT+GGG | + | chr4.4:89277045-89277064 | None:intergenic | 25.0% |
| ! | TTTATAGGTATGCTTAATCT+AGG | - | chr4.4:89278772-89278791 | MS.gene034103:intron | 25.0% |
| ! | TTTATCCAAACATAGAGAAT+GGG | + | chr4.4:89278636-89278655 | None:intergenic | 25.0% |
| !! | GTTTGAATCTTGTTTGATTA+TGG | - | chr4.4:89278571-89278590 | MS.gene034103:intron | 25.0% |
| !!! | CTTTTGTTGAAAATTTTGAC+TGG | - | chr4.4:89277810-89277829 | MS.gene034103:CDS | 25.0% |
| !!! | TAGGTTGATACATATAAACT+TGG | - | chr4.4:89280541-89280560 | MS.gene034103:intron | 25.0% |
| !!! | TGTTTGTTGATTTAACAGAT+GGG | - | chr4.4:89277845-89277864 | MS.gene034103:CDS | 25.0% |
| !!! | TTATAGATAAAGAGAGTATC+AGG | - | chr4.4:89278816-89278835 | MS.gene034103:intron | 25.0% |
| !!! | TTGTTTGTTGATTTAACAGA+TGG | - | chr4.4:89277844-89277863 | MS.gene034103:CDS | 25.0% |
| AAATTACATACGCATCTTCA+AGG | + | chr4.4:89277476-89277495 | None:intergenic | 30.0% | |
| AAATTGGTTACACCAAAAGT+TGG | + | chr4.4:89280380-89280399 | None:intergenic | 30.0% | |
| AAGCAAAAACTCATCTTTCT+TGG | + | chr4.4:89280044-89280063 | None:intergenic | 30.0% | |
| AATAACAAGGTATACTAGCA+AGG | - | chr4.4:89279928-89279947 | MS.gene034103:intron | 30.0% | |
| AATTACATACGCATCTTCAA+GGG | + | chr4.4:89277475-89277494 | None:intergenic | 30.0% | |
| ACACTAACAAAACACATTTG+AGG | + | chr4.4:89277236-89277255 | None:intergenic | 30.0% | |
| ACTAACAATAGACACATTCA+AGG | + | chr4.4:89277431-89277450 | None:intergenic | 30.0% | |
| ATAGTCCTGAATGTATCAAT+TGG | + | chr4.4:89277665-89277684 | None:intergenic | 30.0% | |
| ATATGACCATTGTAGGAAAT+GGG | - | chr4.4:89278338-89278357 | MS.gene034103:CDS | 30.0% | |
| ATGTTTCATTTGAGTAAACG+AGG | - | chr4.4:89278122-89278141 | MS.gene034103:CDS | 30.0% | |
| ATTATAGGCAATGTTTCTTC+TGG | - | chr4.4:89279497-89279516 | MS.gene034103:intron | 30.0% | |
| CACTCCAATGAAAACAAAAA+TGG | + | chr4.4:89277119-89277138 | None:intergenic | 30.0% | |
| CTCAAATGAAACATCAATTC+AGG | + | chr4.4:89278116-89278135 | None:intergenic | 30.0% | |
| CTCTAATGGTTGAAGAAAAT+AGG | - | chr4.4:89280768-89280787 | MS.gene034103:CDS | 30.0% | |
| CTTTACGACAAAAACAAACA+TGG | + | chr4.4:89277046-89277065 | None:intergenic | 30.0% | |
| GACTACTGAAAGACAAATTT+AGG | + | chr4.4:89277205-89277224 | None:intergenic | 30.0% | |
| GATAAATCAGCTAAACCAAT+TGG | - | chr4.4:89276820-89276839 | MS.gene034103:CDS | 30.0% | |
| GATATTGTTTAGCATAACCT+GGG | - | chr4.4:89280183-89280202 | MS.gene034103:intron | 30.0% | |
| GGAAAAAGAAAGTAGATTGT+TGG | - | chr4.4:89280789-89280808 | MS.gene034103:CDS | 30.0% | |
| GTAATCCAATTGATACATTC+AGG | - | chr4.4:89277657-89277676 | MS.gene034103:CDS | 30.0% | |
| GTCTTAATAGAGGGTAAAAT+TGG | + | chr4.4:89280396-89280415 | None:intergenic | 30.0% | |
| GTGTCTATTGTTAGTTAGTT+CGG | - | chr4.4:89277436-89277455 | MS.gene034103:intron | 30.0% | |
| TAACATCAAAAGCTTAGCAT+TGG | + | chr4.4:89279043-89279062 | None:intergenic | 30.0% | |
| TAACATCAACAACATTTCTG+AGG | + | chr4.4:89279119-89279138 | None:intergenic | 30.0% | |
| TATAAGCTATAGTTGACAGA+AGG | + | chr4.4:89279682-89279701 | None:intergenic | 30.0% | |
| TCAACTATAGCTTATAAGCT+TGG | - | chr4.4:89279686-89279705 | MS.gene034103:CDS | 30.0% | |
| TTAAGCTTGTAATCCAAACA+AGG | + | chr4.4:89280209-89280228 | None:intergenic | 30.0% | |
| TTACGACAAAAACAAACATG+GGG | + | chr4.4:89277044-89277063 | None:intergenic | 30.0% | |
| TTAGGCATGTTTACATTCAT+GGG | + | chr4.4:89277187-89277206 | None:intergenic | 30.0% | |
| TTGTTGAAAATATTGATGGG+TGG | - | chr4.4:89277740-89277759 | MS.gene034103:CDS | 30.0% | |
| TTTAGGCATGTTTACATTCA+TGG | + | chr4.4:89277188-89277207 | None:intergenic | 30.0% | |
| ! | AAAAGAAGATTGTGTTGCTA+GGG | + | chr4.4:89278599-89278618 | None:intergenic | 30.0% |
| ! | AGAAAGATGAGTTTTTGCTT+AGG | - | chr4.4:89280044-89280063 | MS.gene034103:intron | 30.0% |
| ! | ATTTTAGGCAAAATTTCAGC+TGG | + | chr4.4:89279461-89279480 | None:intergenic | 30.0% |
| ! | CTATTTTCTTCAACCATTAG+AGG | + | chr4.4:89280770-89280789 | None:intergenic | 30.0% |
| ! | GAAAGATGAGTTTTTGCTTA+GGG | - | chr4.4:89280045-89280064 | MS.gene034103:intron | 30.0% |
| ! | TAAAAGAAGATTGTGTTGCT+AGG | + | chr4.4:89278600-89278619 | None:intergenic | 30.0% |
| ! | TCGAAAGAAGATGTTTTCAT+TGG | - | chr4.4:89276754-89276773 | MS.gene034103:CDS | 30.0% |
| ! | TGTTGAAAATATTGATGGGT+GGG | - | chr4.4:89277741-89277760 | MS.gene034103:CDS | 30.0% |
| ! | TTTTAGGCAAAATTTCAGCT+GGG | + | chr4.4:89279460-89279479 | None:intergenic | 30.0% |
| !! | ATGAACTCATCGTTTTAATG+TGG | - | chr4.4:89278944-89278963 | MS.gene034103:intron | 30.0% |
| !! | TTTTAAAGAACACATTGACG+TGG | - | chr4.4:89278696-89278715 | MS.gene034103:intron | 30.0% |
| !! | TTTTGATTCTTGAATGTGTG+AGG | - | chr4.4:89277147-89277166 | MS.gene034103:intron | 30.0% |
| !!! | AATTCTGTTTTTGAGGGATA+AGG | - | chr4.4:89278971-89278990 | MS.gene034103:intron | 30.0% |
| !!! | CACTCCATTTTTGTTTTCAT+TGG | - | chr4.4:89277112-89277131 | MS.gene034103:intron | 30.0% |
| !!! | CTTATGGATTTTGTTTTCGT+TGG | - | chr4.4:89277276-89277295 | MS.gene034103:intron | 30.0% |
| !!! | TTATTTTTGAAACAGGAGAC+TGG | - | chr4.4:89279139-89279158 | MS.gene034103:intron | 30.0% |
| AAAACATATGCTCTCAAGCA+CGG | + | chr4.4:89279969-89279988 | None:intergenic | 35.0% | |
| AAAGAGAGACTACTCTTGTT+TGG | - | chr4.4:89277991-89278010 | MS.gene034103:CDS | 35.0% | |
| AAGAGTAGTCTCTCTTTGAT+TGG | + | chr4.4:89277988-89278007 | None:intergenic | 35.0% | |
| ACATACACTGACAACAAACA+CGG | - | chr4.4:89278181-89278200 | MS.gene034103:CDS | 35.0% | |
| AGCAAGAAATCCAATCTGAA+GGG | - | chr4.4:89278510-89278529 | MS.gene034103:intron | 35.0% | |
| AGGATGACAAAAAGCAACAA+AGG | + | chr4.4:89279099-89279118 | None:intergenic | 35.0% | |
| ATGTTTAGGTGATCAACATG+CGG | - | chr4.4:89279550-89279569 | MS.gene034103:CDS | 35.0% | |
| ATTCATAATTACCCTGCTTG+TGG | + | chr4.4:89276877-89276896 | None:intergenic | 35.0% | |
| CAACTGCAGTGTTTAAACAT+CGG | + | chr4.4:89277528-89277547 | None:intergenic | 35.0% | |
| CAATAGACACTTGGTTGATT+TGG | - | chr4.4:89279312-89279331 | MS.gene034103:intron | 35.0% | |
| CATATGACCATTGTAGGAAA+TGG | - | chr4.4:89278337-89278356 | MS.gene034103:CDS | 35.0% | |
| CATGTACATATGACCATTGT+AGG | - | chr4.4:89278331-89278350 | MS.gene034103:CDS | 35.0% | |
| CGATATTGTTTAGCATAACC+TGG | - | chr4.4:89280182-89280201 | MS.gene034103:intron | 35.0% | |
| CTCTTTGATTGGGTAAAGAA+GGG | + | chr4.4:89280438-89280457 | None:intergenic | 35.0% | |
| GACAAAGGATTGAAAGCTAT+TGG | - | chr4.4:89277957-89277976 | MS.gene034103:CDS | 35.0% | |
| GATTCAATGCACAAAGATTC+TGG | - | chr4.4:89280007-89280026 | MS.gene034103:intron | 35.0% | |
| GCACTGAAATATGTGCTAAT+AGG | + | chr4.4:89279215-89279234 | None:intergenic | 35.0% | |
| GCGGTTAAAATCAATATCTG+TGG | - | chr4.4:89277625-89277644 | MS.gene034103:CDS | 35.0% | |
| GCTTTCATTCTACTGAATAC+CGG | - | chr4.4:89279629-89279648 | MS.gene034103:CDS | 35.0% | |
| GGAGTAGTTAAATCAAACCA+TGG | - | chr4.4:89279656-89279675 | MS.gene034103:CDS | 35.0% | |
| GGATTTGTATCGGAATAACA+AGG | - | chr4.4:89279915-89279934 | MS.gene034103:intron | 35.0% | |
| GTAAACGAGGACAATTCATT+TGG | - | chr4.4:89278135-89278154 | MS.gene034103:CDS | 35.0% | |
| GTATGTAGATAAGCTCACAA+AGG | - | chr4.4:89280271-89280290 | MS.gene034103:intron | 35.0% | |
| GTTAGTTCCATGGTTGAAAT+TGG | - | chr4.4:89279059-89279078 | MS.gene034103:intron | 35.0% | |
| TACGACAAAAACAAACATGG+GGG | + | chr4.4:89277043-89277062 | None:intergenic | 35.0% | |
| TAGTGTAAAAGAGACACTTG+AGG | - | chr4.4:89277250-89277269 | MS.gene034103:intron | 35.0% | |
| TAGTTCACCAATTTCAACCA+TGG | + | chr4.4:89279069-89279088 | None:intergenic | 35.0% | |
| TCAACTTGATGAGATCCAAT+TGG | + | chr4.4:89276838-89276857 | None:intergenic | 35.0% | |
| TCTCTTTGATTGGGTAAAGA+AGG | + | chr4.4:89280439-89280458 | None:intergenic | 35.0% | |
| TCTTTATCTATAAGGCACGT+TGG | + | chr4.4:89278809-89278828 | None:intergenic | 35.0% | |
| TTAGGTTCATCAGCATTGTT+CGG | + | chr4.4:89279394-89279413 | None:intergenic | 35.0% | |
| TTTCTTCAACCATTAGAGGA+CGG | + | chr4.4:89280766-89280785 | None:intergenic | 35.0% | |
| ! | AGCTTTTGATGTTAGTTCCA+TGG | - | chr4.4:89279049-89279068 | MS.gene034103:intron | 35.0% |
| ! | AGTTGGTATTCCCTTGATAT+TGG | + | chr4.4:89280363-89280382 | None:intergenic | 35.0% |
| ! | ATCAAGGGAATACCAACTTT+TGG | - | chr4.4:89280365-89280384 | MS.gene034103:intron | 35.0% |
| ! | ATGCTTAATCTAGGACCAAT+TGG | - | chr4.4:89278781-89278800 | MS.gene034103:intron | 35.0% |
| ! | TATTGATGGGTGGGTAATTA+TGG | - | chr4.4:89277750-89277769 | MS.gene034103:CDS | 35.0% |
| ! | TGCTTAATCTAGGACCAATT+GGG | - | chr4.4:89278782-89278801 | MS.gene034103:intron | 35.0% |
| ! | TGTTTGGAACAATAGACACT+TGG | - | chr4.4:89279303-89279322 | MS.gene034103:intron | 35.0% |
| ! | TTTGAAACTTCTGTGGTTGA+TGG | - | chr4.4:89279235-89279254 | MS.gene034103:intron | 35.0% |
| !! | AACTCATCGTTTTAATGTGG+TGG | - | chr4.4:89278947-89278966 | MS.gene034103:intron | 35.0% |
| !! | AGATTTCGTTTTCGATTCGA+AGG | - | chr4.4:89280715-89280734 | MS.gene034103:intron | 35.0% |
| !! | GATTGCAAATTTTGATGGGT+TGG | - | chr4.4:89277077-89277096 | MS.gene034103:intron | 35.0% |
| !! | TGGTTGATTTGGAACTTAAC+CGG | - | chr4.4:89279323-89279342 | MS.gene034103:intron | 35.0% |
| !! | TTGTTGATTTAACAGATGGG+TGG | - | chr4.4:89277848-89277867 | MS.gene034103:CDS | 35.0% |
| !! | TTTTGATTCTTGAATGCGTG+AGG | - | chr4.4:89277311-89277330 | MS.gene034103:intron | 35.0% |
| !!! | ATCTTCAAGGGTGTCTTTTA+TGG | + | chr4.4:89277463-89277482 | None:intergenic | 35.0% |
| !!! | GGTGGTAATTCTGTTTTTGA+GGG | - | chr4.4:89278965-89278984 | MS.gene034103:intron | 35.0% |
| !!! | TGGTGGTAATTCTGTTTTTG+AGG | - | chr4.4:89278964-89278983 | MS.gene034103:intron | 35.0% |
| !!! | TTTTGATGGGTTGGTAAGTA+TGG | - | chr4.4:89277086-89277105 | MS.gene034103:intron | 35.0% |
| !!! | TTTTGTTGATAATGTTGGGC+AGG | - | chr4.4:89280592-89280611 | MS.gene034103:intron | 35.0% |
| AACGAAGTAAACACCACCAT+TGG | + | chr4.4:89279846-89279865 | None:intergenic | 40.0% | |
| AACGACTCTGTACTGAATGT+TGG | + | chr4.4:89278374-89278393 | None:intergenic | 40.0% | |
| AAGTATCTGTGCTACATAGC+TGG | - | chr4.4:89278281-89278300 | MS.gene034103:CDS | 40.0% | |
| AATCCAATCTGAAGGGAATC+TGG | - | chr4.4:89278517-89278536 | MS.gene034103:intron | 40.0% | |
| ACACTCTCCAATATCTCCAT+TGG | + | chr4.4:89277882-89277901 | None:intergenic | 40.0% | |
| ACCAACCAATCTCAAATCGA+TGG | + | chr4.4:89277558-89277577 | None:intergenic | 40.0% | |
| ACGACAAAAACAAACATGGG+GGG | + | chr4.4:89277042-89277061 | None:intergenic | 40.0% | |
| AGACTGGAAAAGGAGTTATC+TGG | - | chr4.4:89279155-89279174 | MS.gene034103:intron | 40.0% | |
| AGATCAGACAGTTGAGATTC+TGG | - | chr4.4:89278411-89278430 | MS.gene034103:CDS | 40.0% | |
| AGTATCTGTGCTACATAGCT+GGG | - | chr4.4:89278282-89278301 | MS.gene034103:CDS | 40.0% | |
| ATCCAATCTGAAGGGAATCT+GGG | - | chr4.4:89278518-89278537 | MS.gene034103:intron | 40.0% | |
| ATCGTCTGATCTCTATCCAA+TGG | - | chr4.4:89278463-89278482 | MS.gene034103:intron | 40.0% | |
| CAGCAAGAAATCCAATCTGA+AGG | - | chr4.4:89278509-89278528 | MS.gene034103:intron | 40.0% | |
| CATTGACGTGGTGAAAAAGA+AGG | - | chr4.4:89278708-89278727 | MS.gene034103:intron | 40.0% | |
| CCAACCAATCTCAAATCGAT+GGG | + | chr4.4:89277557-89277576 | None:intergenic | 40.0% | |
| CTCGATCTTGAATCAATGGT+CGG | + | chr4.4:89277606-89277625 | None:intergenic | 40.0% | |
| CTCTTCACAATGCTCTTGTT+TGG | - | chr4.4:89278033-89278052 | MS.gene034103:CDS | 40.0% | |
| CTTTGCCCATTCTCTATGTT+TGG | - | chr4.4:89278628-89278647 | MS.gene034103:intron | 40.0% | |
| GAACCTAAAAACCCTCAACT+GGG | - | chr4.4:89279406-89279425 | MS.gene034103:intron | 40.0% | |
| GACATTGAAACAACAGCACT+TGG | - | chr4.4:89280650-89280669 | MS.gene034103:intron | 40.0% | |
| GATCAGACAGTTGAGATTCT+GGG | - | chr4.4:89278412-89278431 | MS.gene034103:CDS | 40.0% | |
| GCAGACAAGTACTAACATGT+CGG | + | chr4.4:89280497-89280516 | None:intergenic | 40.0% | |
| GCATGATCCAATGGAGATAT+TGG | - | chr4.4:89277872-89277891 | MS.gene034103:CDS | 40.0% | |
| GCATTAGAGGTAGAATCCAA+TGG | - | chr4.4:89279827-89279846 | MS.gene034103:intron | 40.0% | |
| TAGGCAATGTTTCTTCTGGA+TGG | - | chr4.4:89279501-89279520 | MS.gene034103:intron | 40.0% | |
| TAGGTTCATCAGCATTGTTC+GGG | + | chr4.4:89279393-89279412 | None:intergenic | 40.0% | |
| TATCCACATGTGTCAAACAC+CGG | - | chr4.4:89278242-89278261 | MS.gene034103:CDS | 40.0% | |
| TCGATCTTGAATCAATGGTC+GGG | + | chr4.4:89277605-89277624 | None:intergenic | 40.0% | |
| TGAACCTAAAAACCCTCAAC+TGG | - | chr4.4:89279405-89279424 | MS.gene034103:intron | 40.0% | |
| TGATTTAACTACTCCTTCGC+CGG | + | chr4.4:89279651-89279670 | None:intergenic | 40.0% | |
| TGCTAAAGATATAGAGGCTC+TGG | - | chr4.4:89279805-89279824 | MS.gene034103:intron | 40.0% | |
| TGTAAAAGAGACACTTGAGG+AGG | - | chr4.4:89277253-89277272 | MS.gene034103:intron | 40.0% | |
| TGTGAAGGTTTGCATTACCA+AGG | - | chr4.4:89277899-89277918 | MS.gene034103:CDS | 40.0% | |
| TTAGAGGTAGAATCCAATGG+TGG | - | chr4.4:89279830-89279849 | MS.gene034103:intron | 40.0% | |
| TTCATTGGTGCAATTGACCA+AGG | - | chr4.4:89276769-89276788 | MS.gene034103:CDS | 40.0% | |
| TTGAAACAGGAGACTGGAAA+AGG | - | chr4.4:89279145-89279164 | MS.gene034103:intron | 40.0% | |
| ! | AACATCGGATCTTTTACAGC+AGG | + | chr4.4:89277513-89277532 | None:intergenic | 40.0% |
| ! | ACACATTTTGTAGAGAGCTG+TGG | - | chr4.4:89279185-89279204 | MS.gene034103:intron | 40.0% |
| ! | ACATCGGATCTTTTACAGCA+GGG | + | chr4.4:89277512-89277531 | None:intergenic | 40.0% |
| ! | GAGTTTTTGCTTAGGGTTGA+TGG | - | chr4.4:89280052-89280071 | MS.gene034103:intron | 40.0% |
| ! | GATGGATTCAATGTGGACAA+AGG | - | chr4.4:89277942-89277961 | MS.gene034103:CDS | 40.0% |
| ! | GCATAATTGGTTGGAGCATT+CGG | + | chr4.4:89279713-89279732 | None:intergenic | 40.0% |
| ! | GCTAAAAGTACGTATGGTAC+AGG | - | chr4.4:89279605-89279624 | MS.gene034103:CDS | 40.0% |
| ! | TACTTTTAGCCTCCCCTTTA+CGG | + | chr4.4:89279595-89279614 | None:intergenic | 40.0% |
| ! | TAGTGTTTTCCGTCCTCTAA+TGG | - | chr4.4:89280754-89280773 | MS.gene034103:CDS | 40.0% |
| ! | TCACAATGCTCTTGTTTGGA+TGG | - | chr4.4:89278037-89278056 | MS.gene034103:CDS | 40.0% |
| ! | TGGGATTTGAAGTGCTTTCA+AGG | + | chr4.4:89279441-89279460 | None:intergenic | 40.0% |
| !! | AACAGCTGATGGATTCAATG+TGG | - | chr4.4:89277935-89277954 | MS.gene034103:CDS | 40.0% |
| !! | ACCATTGATTCAAGATCGAG+CGG | - | chr4.4:89277606-89277625 | MS.gene034103:CDS | 40.0% |
| !! | ATAAAGAGAGTATCAGGCCA+AGG | - | chr4.4:89278822-89278841 | MS.gene034103:intron | 40.0% |
| !! | CAAACAAGAGCATTGTGAAG+AGG | + | chr4.4:89278035-89278054 | None:intergenic | 40.0% |
| !! | TCAGTGCTTTGAAACTTCTG+TGG | - | chr4.4:89279228-89279247 | MS.gene034103:intron | 40.0% |
| !! | TCTGTGGTTGATGGAAAATG+TGG | - | chr4.4:89279244-89279263 | MS.gene034103:intron | 40.0% |
| !! | TTCACCCATCGATTTGAGAT+TGG | - | chr4.4:89277550-89277569 | MS.gene034103:CDS | 40.0% |
| !! | TTGATTTGGAACTTAACCGG+TGG | - | chr4.4:89279326-89279345 | MS.gene034103:intron | 40.0% |
| !!! | TTTTTGCTTAGGGTTGATGG+TGG | - | chr4.4:89280055-89280074 | MS.gene034103:intron | 40.0% |
| AAAAGAGGACCTGCAAACAG+AGG | + | chr4.4:89278075-89278094 | None:intergenic | 45.0% | |
| AAACCTGAGTCTGCATCAAG+AGG | + | chr4.4:89280096-89280115 | None:intergenic | 45.0% | |
| AACTTAACCGGTGGAGTGAA+AGG | - | chr4.4:89279335-89279354 | MS.gene034103:intron | 45.0% | |
| ACCGCTCGATCTTGAATCAA+TGG | + | chr4.4:89277610-89277629 | None:intergenic | 45.0% | |
| ACTCAGTTCTATCCACAAGC+AGG | - | chr4.4:89276862-89276881 | MS.gene034103:CDS | 45.0% | |
| AGGTAGATTCATCCCAGTTG+AGG | + | chr4.4:89279421-89279440 | None:intergenic | 45.0% | |
| AGTCAGCGTTTCTAAGCCAT+TGG | + | chr4.4:89278482-89278501 | None:intergenic | 45.0% | |
| ATCCCAATCGCTGGATGTTT+AGG | - | chr4.4:89279536-89279555 | MS.gene034103:CDS | 45.0% | |
| ATCTGCTACTGCTTGTTCCT+TGG | + | chr4.4:89276789-89276808 | None:intergenic | 45.0% | |
| ATTCTACTGAATACCGGCGA+AGG | - | chr4.4:89279635-89279654 | MS.gene034103:CDS | 45.0% | |
| CACCTAAACATCCAGCGATT+GGG | + | chr4.4:89279541-89279560 | None:intergenic | 45.0% | |
| CATTACCAAGGCAGTGGATA+AGG | - | chr4.4:89277911-89277930 | MS.gene034103:CDS | 45.0% | |
| CCAAATCCCAACAGCTAATC+CGG | + | chr4.4:89280690-89280709 | None:intergenic | 45.0% | |
| CCAACCAATTATGCACTCGA+AGG | - | chr4.4:89279719-89279738 | MS.gene034103:CDS | 45.0% | |
| CCTTCGAGTGCATAATTGGT+TGG | + | chr4.4:89279722-89279741 | None:intergenic | 45.0% | |
| CGAGGACAATTCATTTGGCT+AGG | - | chr4.4:89278140-89278159 | MS.gene034103:CDS | 45.0% | |
| CTATAGTTGACAGAAGGCCA+TGG | + | chr4.4:89279676-89279695 | None:intergenic | 45.0% | |
| CTCAGTTCTATCCACAAGCA+GGG | - | chr4.4:89276863-89276882 | MS.gene034103:CDS | 45.0% | |
| CTGGAAAAGGAGTTATCTGG+TGG | - | chr4.4:89279158-89279177 | MS.gene034103:intron | 45.0% | |
| GAGGAACCCATTTCCTACAA+TGG | + | chr4.4:89278347-89278366 | None:intergenic | 45.0% | |
| GATGCTCGTGGGATTTGTAT+CGG | - | chr4.4:89279905-89279924 | MS.gene034103:intron | 45.0% | |
| GGAAAATGTGGATGCTGTCA+AGG | - | chr4.4:89279256-89279275 | MS.gene034103:intron | 45.0% | |
| GGATCCTTCGAGTGCATAAT+TGG | + | chr4.4:89279726-89279745 | None:intergenic | 45.0% | |
| GGTAGATTCATCCCAGTTGA+GGG | + | chr4.4:89279420-89279439 | None:intergenic | 45.0% | |
| TACTTCGTTCCTGCCTTCAA+CGG | - | chr4.4:89279857-89279876 | MS.gene034103:intron | 45.0% | |
| TATCCGGTGTTTGACACATG+TGG | + | chr4.4:89278248-89278267 | None:intergenic | 45.0% | |
| TCACCTAAACATCCAGCGAT+TGG | + | chr4.4:89279542-89279561 | None:intergenic | 45.0% | |
| TCTTGATGCAGACTCAGGTT+TGG | - | chr4.4:89280095-89280114 | MS.gene034103:intron | 45.0% | |
| TTCGTACTACCTCTGTTTGC+AGG | - | chr4.4:89278063-89278082 | MS.gene034103:CDS | 45.0% | |
| TTGTAATCCAAACAAGGCCC+AGG | + | chr4.4:89280203-89280222 | None:intergenic | 45.0% | |
| ! | AGTCATAAAGAGCGCGTTGT+TGG | - | chr4.4:89278734-89278753 | MS.gene034103:intron | 45.0% |
| ! | CATCCCAGTTGAGGGTTTTT+AGG | + | chr4.4:89279412-89279431 | None:intergenic | 45.0% |
| ! | CTTGTTTGGAGCAAATCCAC+TGG | - | chr4.4:89278005-89278024 | MS.gene034103:CDS | 45.0% |
| ! | GGAGATATTGGAGAGTGTGA+AGG | - | chr4.4:89277884-89277903 | MS.gene034103:CDS | 45.0% |
| ! | TATAGAGGCTCTGGCATTAG+AGG | - | chr4.4:89279814-89279833 | MS.gene034103:intron | 45.0% |
| !! | CCCATCGATTTGAGATTGGT+TGG | - | chr4.4:89277554-89277573 | MS.gene034103:CDS | 45.0% |
| !! | GCTGTTGTTTCAATGTCAGC+TGG | + | chr4.4:89280647-89280666 | None:intergenic | 45.0% |
| !! | TCTTTTACAGCAGGGCATCT+AGG | + | chr4.4:89277504-89277523 | None:intergenic | 45.0% |
| !! | TGTTGATAATGTTGGGCAGG+CGG | - | chr4.4:89280595-89280614 | MS.gene034103:intron | 45.0% |
| !!! | TATTCATAATTTTTTTTTAT+AGG | - | chr4.4:89278757-89278776 | MS.gene034103:intron | 5.0% |
| AACAGCTAATCCGGCTGCAT+AGG | + | chr4.4:89280681-89280700 | None:intergenic | 50.0% | |
| ATGGGTGGAGCATGATCCAA+TGG | - | chr4.4:89277863-89277882 | MS.gene034103:CDS | 50.0% | |
| CAACCTCTTGATGCAGACTC+AGG | - | chr4.4:89280090-89280109 | MS.gene034103:intron | 50.0% | |
| CAATCCTCCTTTCACTCCAC+CGG | + | chr4.4:89279345-89279364 | None:intergenic | 50.0% | |
| CAGTGGCTTAGAGATGGTCT+TGG | - | chr4.4:89279770-89279789 | MS.gene034103:intron | 50.0% | |
| CGGAGCAAACAATCCGTTGA+AGG | + | chr4.4:89279873-89279892 | None:intergenic | 50.0% | |
| GACCCAGATTCCCTTCAGAT+TGG | + | chr4.4:89278523-89278542 | None:intergenic | 50.0% | |
| GAGACACTTGAGGAGGCTTA+TGG | - | chr4.4:89277260-89277279 | MS.gene034103:intron | 50.0% | |
| GATCAACATGCGGCAATGCT+TGG | - | chr4.4:89279560-89279579 | MS.gene034103:CDS | 50.0% | |
| GCAAACAATCCGTTGAAGGC+AGG | + | chr4.4:89279869-89279888 | None:intergenic | 50.0% | |
| GGTTTGCATTACCAAGGCAG+TGG | - | chr4.4:89277905-89277924 | MS.gene034103:CDS | 50.0% | |
| GTGGATAAGGCAACAGCTGA+TGG | - | chr4.4:89277924-89277943 | MS.gene034103:CDS | 50.0% | |
| TAAGGCACGTTGGACCCAAT+TGG | + | chr4.4:89278799-89278818 | None:intergenic | 50.0% | |
| TGTACTGAATGTTGGCCACG+AGG | + | chr4.4:89278366-89278385 | None:intergenic | 50.0% | |
| TGTTGCCTTATCCACTGCCT+TGG | + | chr4.4:89277919-89277938 | None:intergenic | 50.0% | |
| TTAACCGGTGGAGTGAAAGG+AGG | - | chr4.4:89279338-89279357 | MS.gene034103:intron | 50.0% | |
| TTGGACAAGCGTGCCGTAAA+GGG | - | chr4.4:89279579-89279598 | MS.gene034103:CDS | 50.0% | |
| ! | GAAGGATCCGTTGCTATTGC+TGG | - | chr4.4:89279737-89279756 | MS.gene034103:intron | 50.0% |
| ! | GGGGAGGCTAAAAGTACGTA+TGG | - | chr4.4:89279599-89279618 | MS.gene034103:CDS | 50.0% |
| ! | TGTAGGAAATGGGTTCCTCG+TGG | - | chr4.4:89278348-89278367 | MS.gene034103:CDS | 50.0% |
| !! | AGCATAACCTGGGCCTTGTT+TGG | - | chr4.4:89280193-89280212 | MS.gene034103:intron | 50.0% |
| !! | ATGCAGCCGGATTAGCTGTT+GGG | - | chr4.4:89280681-89280700 | MS.gene034103:intron | 50.0% |
| !! | ATTGTGAAGAGGAGCACCAG+TGG | + | chr4.4:89278024-89278043 | None:intergenic | 50.0% |
| !! | CCGGATTAGCTGTTGGGATT+TGG | - | chr4.4:89280687-89280706 | MS.gene034103:intron | 50.0% |
| !! | TATGCAGCCGGATTAGCTGT+TGG | - | chr4.4:89280680-89280699 | MS.gene034103:intron | 50.0% |
| !! | TCAACGGATTGTTTGCTCCG+TGG | - | chr4.4:89279873-89279892 | MS.gene034103:intron | 50.0% |
| CGCAGCTCCAGCAATAGCAA+CGG | + | chr4.4:89279747-89279766 | None:intergenic | 55.0% | |
| CTTGGACAAGCGTGCCGTAA+AGG | - | chr4.4:89279578-89279597 | MS.gene034103:CDS | 55.0% | |
| GCGATTGGGATACCAGCAAC+TGG | + | chr4.4:89279527-89279546 | None:intergenic | 55.0% | |
| GTTGCTGGTATCCCAATCGC+TGG | - | chr4.4:89279527-89279546 | MS.gene034103:CDS | 55.0% | |
| TCTTCTGGATGGCCAGTTGC+TGG | - | chr4.4:89279512-89279531 | MS.gene034103:intron | 55.0% | |
| TGGACAAGCGTGCCGTAAAG+GGG | - | chr4.4:89279580-89279599 | MS.gene034103:CDS | 55.0% | |
| ! | ACGGATTGTTTGCTCCGTGG+TGG | - | chr4.4:89279876-89279895 | MS.gene034103:intron | 55.0% |
| ! | CGTTGCTATTGCTGGAGCTG+CGG | - | chr4.4:89279745-89279764 | MS.gene034103:intron | 55.0% |
| ! | TGTTGGGCAGGCGGATTTGT+TGG | - | chr4.4:89280604-89280623 | MS.gene034103:intron | 55.0% |
| ACAAGCGTGCCGTAAAGGGG+AGG | - | chr4.4:89279583-89279602 | MS.gene034103:CDS | 60.0% | |
| CGAGCATCATCACGCCACCA+CGG | + | chr4.4:89279893-89279912 | None:intergenic | 60.0% | |
| CTTGGAGCAGCCTATGCAGC+CGG | - | chr4.4:89280668-89280687 | MS.gene034103:intron | 60.0% | |
| GCGGTGCAGTGGCTTAGAGA+TGG | - | chr4.4:89279764-89279783 | MS.gene034103:intron | 60.0% | |
| ! | GGTGGCGTGATGATGCTCGT+GGG | - | chr4.4:89279894-89279913 | MS.gene034103:intron | 60.0% |
| ! | TGGTGGCGTGATGATGCTCG+TGG | - | chr4.4:89279893-89279912 | MS.gene034103:intron | 60.0% |
| TTGCTGGAGCTGCGGTGCAG+TGG | - | chr4.4:89279753-89279772 | MS.gene034103:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 89276751 | 89280859 | 89276751 | ID=MS.gene034103 |
| chr4.4 | mRNA | 89276751 | 89280859 | 89276751 | ID=MS.gene034103.t1;Parent=MS.gene034103 |
| chr4.4 | exon | 89280726 | 89280859 | 89280726 | ID=MS.gene034103.t1.exon1;Parent=MS.gene034103.t1 |
| chr4.4 | CDS | 89280726 | 89280859 | 89280726 | ID=cds.MS.gene034103.t1;Parent=MS.gene034103.t1 |
| chr4.4 | exon | 89279526 | 89279747 | 89279526 | ID=MS.gene034103.t1.exon2;Parent=MS.gene034103.t1 |
| chr4.4 | CDS | 89279526 | 89279747 | 89279526 | ID=cds.MS.gene034103.t1;Parent=MS.gene034103.t1 |
| chr4.4 | exon | 89277499 | 89278456 | 89277499 | ID=MS.gene034103.t1.exon3;Parent=MS.gene034103.t1 |
| chr4.4 | CDS | 89277499 | 89278456 | 89277499 | ID=cds.MS.gene034103.t1;Parent=MS.gene034103.t1 |
| chr4.4 | exon | 89276751 | 89276996 | 89276751 | ID=MS.gene034103.t1.exon4;Parent=MS.gene034103.t1 |
| chr4.4 | CDS | 89276751 | 89276996 | 89276751 | ID=cds.MS.gene034103.t1;Parent=MS.gene034103.t1 |
| Gene Sequence |
| Protein sequence |
