AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene034252

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034252.t1 MTR_4g006730 99.672 305 1 0 1 305 1 305 0.0 611
MS.gene034252.t1 MTR_2g104940 83.226 310 44 3 1 305 4 310 3.70e-176 489
MS.gene034252.t1 MTR_4g006730 99.578 237 1 0 1 237 1 237 1.73e-171 476
MS.gene034252.t1 MTR_4g006730 100.000 218 0 0 88 305 1 218 5.46e-155 432
MS.gene034252.t1 MTR_4g006630 99.541 218 1 0 88 305 1 218 1.95e-154 431
MS.gene034252.t1 MTR_1g097840 59.028 288 103 2 7 288 9 287 1.77e-112 327
MS.gene034252.t1 MTR_1g097840 52.555 274 110 3 7 274 9 268 2.00e-84 255
MS.gene034252.t1 MTR_4g006650 92.908 141 1 1 76 216 5 136 5.32e-84 256
MS.gene034252.t1 MTR_8g087710 53.680 231 102 2 71 298 35 263 6.96e-78 238
MS.gene034252.t1 MTR_8g087720 53.744 227 100 2 75 298 38 262 7.72e-77 236
MS.gene034252.t1 MTR_2g017660 55.349 215 95 1 71 284 35 249 8.50e-74 228
MS.gene034252.t1 MTR_7g010650 46.311 244 129 1 61 304 23 264 3.77e-73 226
MS.gene034252.t1 MTR_2g017590 48.594 249 121 2 54 298 15 260 7.81e-72 223
MS.gene034252.t1 MTR_2g017610 51.261 238 107 3 71 305 34 265 2.62e-71 222
MS.gene034252.t1 MTR_2g017570 51.261 238 107 3 71 305 34 265 2.95e-71 221
MS.gene034252.t1 MTR_2g017620 48.594 249 121 2 54 298 17 262 3.34e-71 221
MS.gene034252.t1 MTR_2g017620 48.594 249 121 2 54 298 3 248 3.96e-71 221
MS.gene034252.t1 MTR_4g084880 46.269 268 128 5 50 305 5 268 1.60e-70 219
MS.gene034252.t1 MTR_5g079570 46.025 239 120 3 64 294 29 266 5.65e-61 195
MS.gene034252.t1 MTR_2g017620 53.261 184 79 2 119 298 1 181 2.27e-59 188
MS.gene034252.t1 MTR_3g008920 49.351 231 112 4 56 284 8 235 7.44e-59 189
MS.gene034252.t1 MTR_5g063930 45.116 215 112 2 75 285 37 249 1.68e-58 188
MS.gene034252.t1 MTR_8g087720 55.422 166 69 2 75 237 38 201 1.48e-51 169
MS.gene034252.t1 MTR_1g070385 40.909 220 130 0 73 292 60 279 6.59e-46 166
MS.gene034252.t1 MTR_7g010650 45.223 157 86 0 61 217 23 179 3.52e-40 139
MS.gene034252.t1 MTR_8g087720 53.425 146 63 2 75 217 38 181 8.96e-40 138
MS.gene034252.t1 MTR_2g101370 36.889 225 122 6 79 289 24 242 4.73e-32 119
MS.gene034252.t1 MTR_1g006490 37.073 205 109 7 80 272 24 220 1.74e-29 112
MS.gene034252.t1 MTR_8g013680 36.232 207 114 5 79 272 23 224 3.40e-28 109
MS.gene034252.t1 MTR_1g006590 35.610 205 112 7 80 272 24 220 7.43e-26 103
MS.gene034252.t1 MTR_1g077540 34.404 218 135 3 79 288 25 242 5.45e-25 101
MS.gene034252.t1 MTR_5g012810 35.122 205 118 4 79 272 23 223 1.33e-23 97.4
MS.gene034252.t1 MTR_6g069040 32.110 218 140 3 79 288 25 242 2.47e-23 96.7
MS.gene034252.t1 MTR_2g094270 29.520 271 149 7 68 304 22 284 5.86e-21 90.9
MS.gene034252.t1 MTR_3g118010 29.545 264 151 9 68 304 19 274 7.81e-21 90.5
MS.gene034252.t1 MTR_1g115405 29.817 218 145 3 79 288 25 242 1.82e-20 89.0
MS.gene034252.t1 MTR_4g063090 31.188 202 131 3 80 273 26 227 1.82e-19 86.3
MS.gene034252.t1 MTR_7g103030 33.981 206 119 5 79 272 25 225 4.76e-19 85.1
MS.gene034252.t1 MTR_7g101190 27.407 270 155 8 68 304 21 282 2.49e-18 83.6
MS.gene034252.t1 MTR_3g070210 28.279 244 147 8 68 283 37 280 1.49e-17 81.6
MS.gene034252.t1 MTR_2g094270 29.911 224 126 5 68 260 22 245 2.27e-17 80.5
MS.gene034252.t1 MTR_8g098375 28.205 234 140 8 68 273 34 267 1.55e-16 78.6
MS.gene034252.t1 MTR_2g060360 28.870 239 149 6 79 304 23 253 3.15e-16 77.0
MS.gene034252.t1 MTR_4g415300 28.302 212 134 6 79 273 60 270 4.97e-16 77.0
MS.gene034252.t1 MTR_5g010150 28.302 212 135 6 79 273 56 267 7.91e-16 76.6
MS.gene034252.t1 MTR_7g023350 27.523 218 150 3 79 288 25 242 1.23e-15 75.5
MS.gene034252.t1 MTR_5g082070 26.923 234 143 7 68 273 37 270 2.43e-15 75.1
MS.gene034252.t1 MTR_4g059390 26.838 272 154 8 68 304 21 282 2.69e-15 75.1
MS.gene034252.t1 MTR_3g070210 28.767 219 131 7 68 261 37 255 8.45e-15 73.6
MS.gene034252.t1 MTR_0793s0010 100.000 26 0 0 280 305 30 55 4.13e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034252.t1 AT1G80760 76.129 310 64 5 1 305 1 305 4.08e-161 451
MS.gene034252.t1 AT4G10380 69.200 250 67 3 43 288 48 291 4.54e-116 337
MS.gene034252.t1 AT4G19030 46.643 283 140 4 33 304 10 292 5.28e-76 234
MS.gene034252.t1 AT5G37820 47.967 246 124 3 55 298 24 267 6.88e-72 223
MS.gene034252.t1 AT5G37820 44.565 276 144 5 27 298 33 303 1.06e-71 224
MS.gene034252.t1 AT4G18910 44.178 292 143 5 29 304 2 289 1.68e-71 223
MS.gene034252.t1 AT5G37810 47.347 245 125 3 56 298 25 267 2.42e-69 217
MS.gene034252.t1 AT1G31885 45.161 248 128 2 65 304 33 280 1.12e-65 209
MS.gene034252.t1 AT1G31885 46.018 226 114 2 87 304 1 226 2.59e-60 193
MS.gene034252.t1 AT2G34390 40.942 276 144 6 43 305 13 282 2.47e-55 181
MS.gene034252.t1 AT4G19030 46.977 215 103 4 33 236 10 224 8.01e-53 172
MS.gene034252.t1 AT2G34390 43.882 237 117 5 79 305 10 240 1.46e-52 173
MS.gene034252.t1 AT4G18910 44.889 225 104 5 29 237 2 222 8.22e-49 162
MS.gene034252.t1 AT4G19030 44.898 196 97 4 33 217 10 205 6.90e-42 144
MS.gene034252.t1 AT3G06100 37.736 212 131 1 75 285 46 257 7.08e-42 146
MS.gene034252.t1 AT3G06100 37.850 214 126 3 79 288 2 212 2.78e-41 143
MS.gene034252.t1 AT2G34390 39.423 208 110 4 43 237 13 217 2.46e-35 127
MS.gene034252.t1 AT3G16240 37.198 207 112 5 79 272 23 224 1.34e-30 115
MS.gene034252.t1 AT2G34390 37.895 190 102 4 43 219 13 199 3.16e-28 108
MS.gene034252.t1 AT2G25810 34.928 209 118 6 75 272 19 220 2.09e-27 107
MS.gene034252.t1 AT2G29870 47.826 115 57 1 191 305 22 133 5.65e-26 100
MS.gene034252.t1 AT5G47450 34.361 227 123 7 79 284 23 244 2.64e-25 102
MS.gene034252.t1 AT4G17340 33.816 207 119 5 79 272 23 224 4.92e-24 98.6
MS.gene034252.t1 AT3G26520 32.314 229 136 5 79 294 26 248 1.09e-21 92.4
MS.gene034252.t1 AT2G36830 33.816 207 119 5 79 272 25 226 7.83e-21 89.7
MS.gene034252.t1 AT4G35100 29.242 277 161 9 55 304 7 275 9.25e-20 87.4
MS.gene034252.t1 AT4G35100 29.242 277 161 9 55 304 7 275 9.25e-20 87.4
MS.gene034252.t1 AT3G06100 33.813 139 91 1 151 288 41 179 1.12e-19 85.5
MS.gene034252.t1 AT2G16850 28.731 268 148 9 68 304 18 273 2.51e-18 83.6
MS.gene034252.t1 AT1G17810 30.357 224 139 6 79 287 28 249 9.80e-18 81.6
MS.gene034252.t1 AT1G73190 29.596 223 144 3 79 288 28 250 1.20e-17 81.3
MS.gene034252.t1 AT4G01470 28.755 233 140 6 79 290 25 252 1.50e-17 80.9
MS.gene034252.t1 AT5G60660 28.444 225 137 6 72 273 36 259 1.64e-17 81.3
MS.gene034252.t1 AT3G53420 26.568 271 156 8 68 304 21 282 8.90e-17 79.3
MS.gene034252.t1 AT3G53420 26.568 271 156 8 68 304 21 282 8.90e-17 79.3
MS.gene034252.t1 AT4G00430 29.060 234 137 8 68 273 35 267 9.92e-17 79.3
MS.gene034252.t1 AT2G37170 26.568 271 156 8 68 304 19 280 1.06e-16 79.0
MS.gene034252.t1 AT4G23400 29.717 212 131 6 79 273 57 267 1.29e-16 79.0
MS.gene034252.t1 AT1G31885 43.678 87 49 0 65 151 33 119 1.39e-16 75.5
MS.gene034252.t1 AT3G54820 29.259 270 150 8 68 304 20 281 1.93e-16 78.2
MS.gene034252.t1 AT2G37170 26.568 271 156 8 68 304 62 323 2.11e-16 79.0
MS.gene034252.t1 AT2G45960 29.487 234 136 8 68 273 34 266 2.39e-16 78.2
MS.gene034252.t1 AT1G01620 29.717 212 131 6 79 273 56 266 2.39e-16 78.2
MS.gene034252.t1 AT3G61430 30.516 213 128 7 79 273 56 266 1.44e-15 75.9
MS.gene034252.t1 AT3G61430 30.516 213 128 7 79 273 56 266 1.44e-15 75.9
MS.gene034252.t1 AT2G37180 26.199 271 157 8 68 304 19 280 2.23e-15 75.5
MS.gene034252.t1 AT2G39010 27.574 272 156 8 66 304 18 281 7.33e-14 70.9
MS.gene034252.t1 AT2G45960 30.093 216 125 7 68 258 34 248 7.46e-14 70.9
MS.gene034252.t1 AT3G47440 27.477 222 146 5 79 289 27 244 8.41e-14 70.5
MS.gene034252.t1 AT2G45960 30.093 216 125 7 68 258 34 248 8.93e-14 70.9
MS.gene034252.t1 AT1G01620 30.726 179 109 5 109 273 17 194 1.76e-13 68.9

Find 73 sgRNAs with CRISPR-Local

Find 255 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATCAACTGGTCACATTTC+TGG 0.140657 4.1:+88698046 MS.gene034252:CDS
TCCTGTCCCTCTTGCCAAAA+AGG 0.248434 4.1:+88697460 MS.gene034252:CDS
GCTGGTCCTAGTGTTCTTAC+TGG 0.259920 4.1:-88701228 None:intergenic
TTTCTGAGTTATGTATCTTT+TGG 0.287885 4.1:-88697973 None:intergenic
CATAACTCAGAAACACTAAT+TGG 0.296495 4.1:+88697983 MS.gene034252:CDS
GCCCCTATTCTTGGTGCTCT+TGG 0.301422 4.1:+88701294 MS.gene034252:CDS
TTCATTGAAGCTCCAGTTGC+AGG 0.320017 4.1:-88701204 None:intergenic
GTATATTGCTGCACAAGTTT+TGG 0.323183 4.1:+88698237 MS.gene034252:CDS
CATCATCTTCTGAAACTTCC+AGG 0.332213 4.1:-88701390 None:intergenic
CAGGTTGGAGCTGAGTTTAT+AGG 0.341644 4.1:+88697905 MS.gene034252:intron
CCAGGAGTACCTGGGGTAGC+AGG 0.347255 4.1:-88697290 None:intergenic
CTTGGTGCTCTTGGTGGGGC+AGG 0.355406 4.1:+88701303 MS.gene034252:CDS
TATCTCATAGCCCCTATTCT+TGG 0.361100 4.1:+88701285 MS.gene034252:CDS
ACGGTTCCTTCAGTTGAATA+TGG 0.365783 4.1:+88698322 MS.gene034252:CDS
CACCAAGAGCACCAAGAATA+GGG 0.367072 4.1:-88701296 None:intergenic
CCTGGGGTAGCAGGGGTAGA+AGG 0.377162 4.1:-88697281 None:intergenic
ATATACTGCAGGCCTGCAAC+TGG 0.394672 4.1:+88701192 MS.gene034252:intron
TAGTTGTTTGCAGCAATTGC+TGG 0.400189 4.1:-88701246 None:intergenic
ATGCTCAACATACTCATTGC+TGG 0.401599 4.1:+88700604 MS.gene034252:CDS
TTGGCAAGAGGGACAGGAGG+GGG 0.402167 4.1:-88697455 None:intergenic
CCTATTCTTGGTGCTCTTGG+TGG 0.402986 4.1:+88701297 MS.gene034252:CDS
CCACCAAGAGCACCAAGAAT+AGG 0.407883 4.1:-88701297 None:intergenic
ATTGGATGTGCTGGAGCTAC+TGG 0.408901 4.1:+88698001 MS.gene034252:CDS
CTATTCTTGGTGCTCTTGGT+GGG 0.417084 4.1:+88701298 MS.gene034252:CDS
AGAGGAGCACCAGGAGTACC+TGG 0.426312 4.1:-88697299 None:intergenic
GGCAAAGAGCAAGTGACTTT+AGG 0.427110 4.1:-88697431 None:intergenic
ACATACATTCTAATGTTTGC+TGG 0.431868 4.1:+88697929 MS.gene034252:CDS
GGCTTCAAATCTGAGAGAAC+TGG 0.434296 4.1:+88697329 MS.gene034252:CDS
ATGCAGGTGGGAGAACTTGC+GGG 0.438650 4.1:+88700559 MS.gene034252:intron
CCTGCTACCCCAGGTACTCC+TGG 0.460634 4.1:+88697290 MS.gene034252:CDS
AAATCTGAGAGAACTGGAAA+TGG 0.466281 4.1:+88697335 MS.gene034252:CDS
CTGCATTAAAACACTTCCCA+TGG 0.472333 4.1:+88698104 MS.gene034252:CDS
TCAGAGTTAAACTCTTCATC+AGG 0.475612 4.1:-88701348 None:intergenic
GAAACACTAATTGGATGTGC+TGG 0.482781 4.1:+88697992 MS.gene034252:CDS
CAAACAACTACAAAGGCATA+TGG 0.493499 4.1:+88701259 MS.gene034252:CDS
GCAAATGAAATCGTGACGGC+TGG 0.507617 4.1:-88698082 None:intergenic
GTGACACCACCACTCATGAA+TGG 0.510613 4.1:-88698301 None:intergenic
TATTCTTGGTGCTCTTGGTG+GGG 0.515515 4.1:+88701299 MS.gene034252:CDS
GAAGACTGGACTTTGGAAGA+TGG 0.520509 4.1:+88697401 MS.gene034252:CDS
CAGGAGTACCTGGGGTAGCA+GGG 0.521311 4.1:-88697289 None:intergenic
ATCATCTTCTGAAACTTCCA+GGG 0.521569 4.1:-88701389 None:intergenic
GAAACTTCCAGGGGCAGAAG+AGG 0.526255 4.1:-88701379 None:intergenic
GTTAAAGCCTCTTCTGCCCC+TGG 0.527500 4.1:+88701372 MS.gene034252:CDS
TTTCATCCATTCATGAGTGG+TGG 0.532048 4.1:+88698295 MS.gene034252:CDS
TGCTCAACATACTCATTGCT+GGG 0.532589 4.1:+88700605 MS.gene034252:CDS
TAAACTCTAAAGCAAAAGCT+TGG 0.536190 4.1:-88698345 None:intergenic
TAGTGTTGAAGACTGGACTT+TGG 0.539097 4.1:+88697394 MS.gene034252:CDS
GAACTTGCGGGAATCGCGGT+GGG 0.555721 4.1:+88700571 MS.gene034252:CDS
CCTTCTACCCCTGCTACCCC+AGG 0.557794 4.1:+88697281 MS.gene034252:CDS
GCAGGGGTAGAAGGTACTGA+TGG 0.572195 4.1:-88697272 None:intergenic
GCTTGGCCATATTCAACTGA+AGG 0.575237 4.1:-88698328 None:intergenic
GGGAGAACTTGCGGGAATCG+CGG 0.575910 4.1:+88700567 MS.gene034252:CDS
TGATTAGAGTATGGACAATG+AGG 0.583019 4.1:+88697244 None:intergenic
AGAGCAAGTGACTTTAGGTA+AGG 0.585846 4.1:-88697426 None:intergenic
AGAACTTGCGGGAATCGCGG+TGG 0.586192 4.1:+88700570 MS.gene034252:CDS
ATGAATCCAGTAAGAACACT+AGG 0.586393 4.1:+88701222 MS.gene034252:CDS
ATTCATGAGTGGTGGTGTCA+CGG 0.586869 4.1:+88698303 MS.gene034252:CDS
AATGCAGGTGGGAGAACTTG+CGG 0.593498 4.1:+88700558 MS.gene034252:intron
ACCAAGAGCACCAAGAATAG+GGG 0.596229 4.1:-88701295 None:intergenic
AGGAGTACCTGGGGTAGCAG+GGG 0.604848 4.1:-88697288 None:intergenic
TTTGGCAAGAGGGACAGGAG+GGG 0.604963 4.1:-88697456 None:intergenic
GAGGAGCACCAGGAGTACCT+GGG 0.605523 4.1:-88697298 None:intergenic
AGGAGCACCAGGAGTACCTG+GGG 0.605545 4.1:-88697297 None:intergenic
TGATGAAGAGTTTAACTCTG+AGG 0.607367 4.1:+88701350 MS.gene034252:CDS
ACTCACAGCTCTTGTGTCGG+TGG 0.611393 4.1:-88698407 None:intergenic
CATGTTTGTTGTCACTGCAG+TGG 0.612813 4.1:+88698384 MS.gene034252:CDS
CAGGGGTAGAAGGTACTGAT+GGG 0.623548 4.1:-88697271 None:intergenic
TGCAGCAAATGAAATCGTGA+CGG 0.637791 4.1:-88698086 None:intergenic
TCATCTTCTGAAACTTCCAG+GGG 0.658967 4.1:-88701388 None:intergenic
ATTGCTGCAAACAACTACAA+AGG 0.670460 4.1:+88701252 MS.gene034252:CDS
TATACTCACAGCTCTTGTGT+CGG 0.674496 4.1:-88698410 None:intergenic
ACTTGTGCAGCAATATACAA+AGG 0.678381 4.1:-88698232 None:intergenic
GAGTATGTTGAGCATGACAG+TGG 0.737398 4.1:-88700596 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+GGG - chr4.1:88699098-88699079 None:intergenic 0.0%
!! TAATAAAAATATATATTTAA+TGG - chr4.1:88700738-88700757 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr4.1:88699099-88699080 None:intergenic 0.0%
!! AAGAAAAATGTATAAATAAA+GGG - chr4.1:88698647-88698666 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr4.1:88698648-88698667 None:intergenic 10.0%
!!! TAATTTTGTGAATTAATTTT+AGG + chr4.1:88698207-88698226 MS.gene034252:intron 10.0%
!! AAAGTTCTTATAATAGAATA+TGG - chr4.1:88698452-88698471 None:intergenic 15.0%
!! ACACAATATAATTAAATAAG+TGG - chr4.1:88700053-88700072 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - chr4.1:88698646-88698665 None:intergenic 15.0%
!! ATATATAGAAACAAATAAAG+AGG + chr4.1:88699135-88699154 MS.gene034252:intron 15.0%
!! ATCAGCATATATATATATAT+AGG + chr4.1:88698869-88698888 MS.gene034252:intron 15.0%
!! TAATTAGAGTTATATTGTAT+TGG - chr4.1:88698583-88698602 None:intergenic 15.0%
!! TATATAGAAACAAATAAAGA+GGG + chr4.1:88699136-88699155 MS.gene034252:intron 15.0%
!! TCAGCATATATATATATATA+GGG + chr4.1:88698870-88698889 MS.gene034252:intron 15.0%
!! TTTAGTACATGTTAAAATTA+GGG - chr4.1:88697730-88697749 None:intergenic 15.0%
!!! AATTAAAATATGTACCTTTT+TGG - chr4.1:88697477-88697496 None:intergenic 15.0%
!!! AGTTTTGATAAATTACAATT+TGG + chr4.1:88700137-88700156 MS.gene034252:intron 15.0%
!!! ATACTTTGTTTAAGAAAATA+AGG + chr4.1:88698819-88698838 MS.gene034252:intron 15.0%
!!! TAAAACATTTTAAATTCTTG+AGG - chr4.1:88697376-88697395 None:intergenic 15.0%
!!! TTTTAGTACATGTTAAAATT+AGG - chr4.1:88697731-88697750 None:intergenic 15.0%
!! AAAGTGGAATATATTGAATT+GGG - chr4.1:88698623-88698642 None:intergenic 20.0%
!! AAGATATCAAAAGTAATGAT+TGG - chr4.1:88699218-88699237 None:intergenic 20.0%
!! ACATGGTAAAAAAGTTAATA+GGG + chr4.1:88697818-88697837 MS.gene034252:intron 20.0%
!! ATGTGTTAAATAATGTAGTT+GGG + chr4.1:88697861-88697880 MS.gene034252:intron 20.0%
!! CACATCAATATATCAAAAAT+AGG - chr4.1:88697846-88697865 None:intergenic 20.0%
!! TACATGGTAAAAAAGTTAAT+AGG + chr4.1:88697817-88697836 MS.gene034252:intron 20.0%
!! TGAATTAGAAGATGAATTTA+AGG - chr4.1:88698153-88698172 None:intergenic 20.0%
!! TTAAATGTTACAGAGAATTA+CGG + chr4.1:88697572-88697591 MS.gene034252:intron 20.0%
!!! ATGATCATAATTTTATCAAC+TGG + chr4.1:88698034-88698053 MS.gene034252:CDS 20.0%
!!! GTGTAACATTTTTTAAAATC+CGG + chr4.1:88697677-88697696 MS.gene034252:intron 20.0%
!!! GTTTATATCATTTGTTTTGT+CGG - chr4.1:88700922-88700941 None:intergenic 20.0%
!!! TAAAGGTACAATTGTATATA+TGG + chr4.1:88699382-88699401 MS.gene034252:intron 20.0%
!!! TACTAACATGATTTTTGTAA+AGG + chr4.1:88697647-88697666 MS.gene034252:intron 20.0%
!!! TCTTTTTGGATTCAATTTTA+AGG - chr4.1:88699617-88699636 None:intergenic 20.0%
!!! TTTATATCATTTGTTTTGTC+GGG - chr4.1:88700921-88700940 None:intergenic 20.0%
!!! TTTTATATATCCATTTAGTG+AGG - chr4.1:88699716-88699735 None:intergenic 20.0%
! AAAGATCCAATATTCCATTT+AGG + chr4.1:88700957-88700976 MS.gene034252:intron 25.0%
! AAATACATACACGTAAAAAC+AGG - chr4.1:88701098-88701117 None:intergenic 25.0%
! AATACTAACATATGTCCTTA+TGG + chr4.1:88699447-88699466 MS.gene034252:intron 25.0%
! ACACCTTCATAAAAATTAGT+TGG - chr4.1:88698966-88698985 None:intergenic 25.0%
! ATGTTCATTGATACAATTAG+TGG - chr4.1:88699753-88699772 None:intergenic 25.0%
! CATGGTAAAAAAGTTAATAG+GGG + chr4.1:88697819-88697838 MS.gene034252:intron 25.0%
! CCTTTGTCAAAAAAAACAAT+GGG - chr4.1:88700487-88700506 None:intergenic 25.0%
! CGAATGTGATTAAAATAATG+AGG - chr4.1:88700649-88700668 None:intergenic 25.0%
! CTAGACACTAAAATATTTAG+TGG + chr4.1:88700877-88700896 MS.gene034252:intron 25.0%
! CTTTGTCAAAAAAAACAATG+GGG - chr4.1:88700486-88700505 None:intergenic 25.0%
! GAAAGTGGAATATATTGAAT+TGG - chr4.1:88698624-88698643 None:intergenic 25.0%
! GAAATTCAGACATGTAAAAA+AGG + chr4.1:88701064-88701083 MS.gene034252:intron 25.0%
! GATGTGTTAAATAATGTAGT+TGG + chr4.1:88697860-88697879 MS.gene034252:intron 25.0%
! GATTAATGTAATCATTTACC+AGG + chr4.1:88697886-88697905 MS.gene034252:intron 25.0%
! GCAAAGTTATAACTAAAAAG+TGG + chr4.1:88698992-88699011 MS.gene034252:intron 25.0%
! TCCTTTGTCAAAAAAAACAA+TGG - chr4.1:88700488-88700507 None:intergenic 25.0%
! TCTATACTGATAATAGTTGA+AGG + chr4.1:88699810-88699829 MS.gene034252:intron 25.0%
! TGTTAAAATTAGGGTGAATT+TGG - chr4.1:88697721-88697740 None:intergenic 25.0%
! TTTAACTCTTAAAGCAAATG+AGG - chr4.1:88700854-88700873 None:intergenic 25.0%
! TTTGTGAAATCAATTTCTGA+TGG - chr4.1:88699342-88699361 None:intergenic 25.0%
!! ACACCAACTAATTTTTATGA+AGG + chr4.1:88698960-88698979 MS.gene034252:intron 25.0%
!! TTGAAATAGCTCAGTTATTT+TGG - chr4.1:88698536-88698555 None:intergenic 25.0%
!! TTTCTGAGTTATGTATCTTT+TGG - chr4.1:88697976-88697995 None:intergenic 25.0%
!!! ATGAATCTCCATATTTTTGT+CGG + chr4.1:88700188-88700207 MS.gene034252:intron 25.0%
!!! GGACACTTTTTTTAGTAAAT+GGG - chr4.1:88698514-88698533 None:intergenic 25.0%
!!! TGAAATAGCTCAGTTATTTT+GGG - chr4.1:88698535-88698554 None:intergenic 25.0%
!!! TTGTTGTTACATTTTTCCAT+GGG - chr4.1:88698123-88698142 None:intergenic 25.0%
!!! TTTGTTGTTACATTTTTCCA+TGG - chr4.1:88698124-88698143 None:intergenic 25.0%
AAATAATGAGGAGTGAAAGT+TGG - chr4.1:88700637-88700656 None:intergenic 30.0%
AAATATCTCACTGCAAAACA+TGG - chr4.1:88699787-88699806 None:intergenic 30.0%
AATGTAATCATTTACCAGGT+TGG + chr4.1:88697890-88697909 MS.gene034252:intron 30.0%
ACATACATTCTAATGTTTGC+TGG + chr4.1:88697929-88697948 MS.gene034252:CDS 30.0%
ACCATGTATGAAACTATACA+AGG - chr4.1:88697805-88697824 None:intergenic 30.0%
ACCTTGTATAGTTTCATACA+TGG + chr4.1:88697801-88697820 MS.gene034252:intron 30.0%
ACTAACAAAGTCTACATTCA+GGG - chr4.1:88700292-88700311 None:intergenic 30.0%
AGATACGTTGCAAATTCTTA+AGG + chr4.1:88700806-88700825 MS.gene034252:intron 30.0%
AGGAAATGCAAATAAACAAG+AGG + chr4.1:88698839-88698858 MS.gene034252:intron 30.0%
CATAACTCAGAAACACTAAT+TGG + chr4.1:88697983-88698002 MS.gene034252:CDS 30.0%
GTACACTAACAAATACCATA+AGG - chr4.1:88699465-88699484 None:intergenic 30.0%
GTTGATATATATGAGACAGA+GGG - chr4.1:88699960-88699979 None:intergenic 30.0%
TGTACTAAAATTTGATGTCG+CGG + chr4.1:88697741-88697760 MS.gene034252:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr4.1:88698639-88698658 None:intergenic 30.0%
TGTTGATATATATGAGACAG+AGG - chr4.1:88699961-88699980 None:intergenic 30.0%
TTAATGTCGATAATGACTTG+TGG + chr4.1:88700524-88700543 MS.gene034252:intron 30.0%
TTGCAATTTATCTGCATTCA+GGG - chr4.1:88700263-88700282 None:intergenic 30.0%
TTGCATATTATCTGCATTCA+GGG + chr4.1:88700413-88700432 MS.gene034252:intron 30.0%
TTTGACACTAAATATACTGC+AGG + chr4.1:88701181-88701200 MS.gene034252:intron 30.0%
TTTGCAATTTATCTGCATTC+AGG - chr4.1:88700264-88700283 None:intergenic 30.0%
TTTGCATATTATCTGCATTC+AGG + chr4.1:88700412-88700431 MS.gene034252:intron 30.0%
! CTTTTAGCAAGTTATCCTAT+TGG + chr4.1:88698924-88698943 MS.gene034252:intron 30.0%
! GTCTTTTAACAAATGCCAAT+AGG - chr4.1:88698942-88698961 None:intergenic 30.0%
! TTTTCTTATCTCACACTTCT+CGG + chr4.1:88701018-88701037 MS.gene034252:intron 30.0%
!! TAAACTCTAAAGCAAAAGCT+TGG - chr4.1:88698348-88698367 None:intergenic 30.0%
!! TGAATCTCCATATTTTTGTC+GGG + chr4.1:88700189-88700208 MS.gene034252:intron 30.0%
!!! AATGTTTTAGTGTTGAAGAC+TGG + chr4.1:88697387-88697406 MS.gene034252:CDS 30.0%
!!! CCCATTGTTTTTTTTGACAA+AGG + chr4.1:88700484-88700503 MS.gene034252:intron 30.0%
!!! GGGACACTTTTTTTAGTAAA+TGG - chr4.1:88698515-88698534 None:intergenic 30.0%
AAAGTGGATATCACACCTTA+AGG + chr4.1:88699008-88699027 MS.gene034252:intron 35.0%
AAATCTGAGAGAACTGGAAA+TGG + chr4.1:88697335-88697354 MS.gene034252:CDS 35.0%
ACAAGGCCTAAATGGAATAT+TGG - chr4.1:88700966-88700985 None:intergenic 35.0%
ACTAACGAAGTCTACATTCA+GGG - chr4.1:88700356-88700375 None:intergenic 35.0%
ACTTGTGCAGCAATATACAA+AGG - chr4.1:88698235-88698254 None:intergenic 35.0%
AGTAAATGGGTCAGATATTC+CGG - chr4.1:88698501-88698520 None:intergenic 35.0%
ATCTGTGTGAAAAACCAAAC+TGG + chr4.1:88698668-88698687 MS.gene034252:intron 35.0%
ATCTTATGATTCAAGCCACT+AGG + chr4.1:88699233-88699252 MS.gene034252:intron 35.0%
ATGAATCCAGTAAGAACACT+AGG + chr4.1:88701222-88701241 MS.gene034252:CDS 35.0%
CTAAAAGACTCCTTCACAAA+AGG - chr4.1:88698911-88698930 None:intergenic 35.0%
CTAATTCCCCGACAAAAATA+TGG - chr4.1:88700199-88700218 None:intergenic 35.0%
CTACATGTTCATGTTCAGTA+AGG - chr4.1:88699926-88699945 None:intergenic 35.0%
GACTAACAAAGTCTACATTC+AGG - chr4.1:88700293-88700312 None:intergenic 35.0%
GCAAACAATAAGATCCTGTT+AGG - chr4.1:88700991-88701010 None:intergenic 35.0%
TAAGATCCTGTTAGGAAACA+AGG - chr4.1:88700983-88701002 None:intergenic 35.0%
TCAATTGAGTTATGTTCACG+AGG - chr4.1:88700785-88700804 None:intergenic 35.0%
TCAGAGTTAAACTCTTCATC+AGG - chr4.1:88701351-88701370 None:intergenic 35.0%
TCAGGGACTAAATTGACTAA+CGG - chr4.1:88700307-88700326 None:intergenic 35.0%
TGATGAAGAGTTTAACTCTG+AGG + chr4.1:88701350-88701369 MS.gene034252:CDS 35.0%
TGCTAAAAGACACCATCAAA+GGG + chr4.1:88699038-88699057 MS.gene034252:intron 35.0%
TTATCAACTGGTCACATTTC+TGG + chr4.1:88698046-88698065 MS.gene034252:CDS 35.0%
TTGCTAAAAGACACCATCAA+AGG + chr4.1:88699037-88699056 MS.gene034252:intron 35.0%
! AAGACATGCTTTTGTCCAAA+AGG + chr4.1:88699647-88699666 MS.gene034252:intron 35.0%
! CAAACAACTACAAAGGCATA+TGG + chr4.1:88701259-88701278 MS.gene034252:CDS 35.0%
! GTATATTGCTGCACAAGTTT+TGG + chr4.1:88698237-88698256 MS.gene034252:CDS 35.0%
! GTTTTTCATCCATTCATGAG+TGG + chr4.1:88698292-88698311 MS.gene034252:CDS 35.0%
! TGATAATAGTTGAAGGCATG+TGG + chr4.1:88699817-88699836 MS.gene034252:intron 35.0%
! TGGACAAAAGCATGTCTTAT+TGG - chr4.1:88699645-88699664 None:intergenic 35.0%
! TGTGCTTCTTTTACTCTCAA+AGG + chr4.1:88698268-88698287 MS.gene034252:CDS 35.0%
! TTTTAGCAAGTCACACCTTA+AGG - chr4.1:88699026-88699045 None:intergenic 35.0%
!! AAGTAATGATTGGTGCTGAA+AGG - chr4.1:88699208-88699227 None:intergenic 35.0%
!! AGTAATGATTGGTGCTGAAA+GGG - chr4.1:88699207-88699226 None:intergenic 35.0%
!! ATATGTACCTTTTTGGCAAG+AGG - chr4.1:88697470-88697489 None:intergenic 35.0%
!! GAATCTCCATATTTTTGTCG+GGG + chr4.1:88700190-88700209 MS.gene034252:intron 35.0%
!! TATGTACCTTTTTGGCAAGA+GGG - chr4.1:88697469-88697488 None:intergenic 35.0%
!! TCTTATTGGTCGACTCTTTT+TGG - chr4.1:88699631-88699650 None:intergenic 35.0%
AAGGCTAAGATGAGAGTCAA+TGG + chr4.1:88699666-88699685 MS.gene034252:intron 40.0%
ACGGTTCCTTCAGTTGAATA+TGG + chr4.1:88698322-88698341 MS.gene034252:CDS 40.0%
AGAGCAAGTGACTTTAGGTA+AGG - chr4.1:88697429-88697448 None:intergenic 40.0%
ATGCTCAACATACTCATTGC+TGG + chr4.1:88700604-88700623 MS.gene034252:CDS 40.0%
CTGCATTAAAACACTTCCCA+TGG + chr4.1:88698104-88698123 MS.gene034252:CDS 40.0%
GAAACACTAATTGGATGTGC+TGG + chr4.1:88697992-88698011 MS.gene034252:CDS 40.0%
GACTAACGAAGTCTACATTC+AGG - chr4.1:88700357-88700376 None:intergenic 40.0%
GTAAATGGGTCAGATATTCC+GGG - chr4.1:88698500-88698519 None:intergenic 40.0%
GTTAGGAAACAAGGCCTAAA+TGG - chr4.1:88700974-88700993 None:intergenic 40.0%
TAAAAGACACCATCAAAGGG+TGG + chr4.1:88699041-88699060 MS.gene034252:intron 40.0%
TAACATGATGCAATGCAGGT+GGG + chr4.1:88700547-88700566 MS.gene034252:intron 40.0%
TAGAACCAATCATGTGCTTG+AGG + chr4.1:88698775-88698794 MS.gene034252:intron 40.0%
TATACTCACAGCTCTTGTGT+CGG - chr4.1:88698413-88698432 None:intergenic 40.0%
TATCTCATAGCCCCTATTCT+TGG + chr4.1:88701285-88701304 MS.gene034252:CDS 40.0%
TATGCAAAACAGTCCATGCA+TGG - chr4.1:88700400-88700419 None:intergenic 40.0%
TCCATGCATGGTCAATTTCA+GGG - chr4.1:88700388-88700407 None:intergenic 40.0%
TGCAGCAAATGAAATCGTGA+CGG - chr4.1:88698089-88698108 None:intergenic 40.0%
TGCTCAACATACTCATTGCT+GGG + chr4.1:88700605-88700624 MS.gene034252:CDS 40.0%
TTTCATCCATTCATGAGTGG+TGG + chr4.1:88698295-88698314 MS.gene034252:CDS 40.0%
! AATAGTTGAAGGCATGTGGT+GGG + chr4.1:88699821-88699840 MS.gene034252:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG + chr4.1:88700217-88700236 MS.gene034252:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG - chr4.1:88700236-88700217 None:intergenic 40.0%
! ATTGAACAAAGCTAGCCTAG+TGG - chr4.1:88699251-88699270 None:intergenic 40.0%
! CAAACTGGCTCAAATATTCC+GGG + chr4.1:88698683-88698702 MS.gene034252:intron 40.0%
! CAGCTTTTGTCCTCACTAAA+TGG + chr4.1:88699703-88699722 MS.gene034252:intron 40.0%
! CCAAACTGGCTCAAATATTC+CGG + chr4.1:88698682-88698701 MS.gene034252:intron 40.0%
! CTAGAAGACACCTTTTGTGA+AGG + chr4.1:88698898-88698917 MS.gene034252:intron 40.0%
! CTCACACTTCTCGGATATTT+TGG + chr4.1:88701027-88701046 MS.gene034252:intron 40.0%
! GAGGGTACAGAAATGTATGT+AGG + chr4.1:88699154-88699173 MS.gene034252:intron 40.0%
! GATTTGAAGCCACCAAAAAG+AGG - chr4.1:88697320-88697339 None:intergenic 40.0%
! TAATAGTTGAAGGCATGTGG+TGG + chr4.1:88699820-88699839 MS.gene034252:intron 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG + chr4.1:88700216-88700235 MS.gene034252:intron 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG - chr4.1:88700235-88700216 None:intergenic 40.0%
! TAGTGTTGAAGACTGGACTT+TGG + chr4.1:88697394-88697413 MS.gene034252:CDS 40.0%
!! TCATCTTCTGAAACTTCCAG+GGG - chr4.1:88701391-88701410 None:intergenic 40.0%
!! TGACTCTCATCTTAGCCTTT+TGG - chr4.1:88699665-88699684 None:intergenic 40.0%
!! TTTAGGCCTTGTTTCCTAAC+AGG + chr4.1:88700974-88700993 MS.gene034252:intron 40.0%
!!! CTTTTGGTTCACAATTGCAG+TGG - chr4.1:88697960-88697979 None:intergenic 40.0%
AAAATATACTCCCTCCGTCC+CGG - chr4.1:88698704-88698723 None:intergenic 45.0%
ACTAACGGAGTCTGCATTCA+GGG - chr4.1:88700324-88700343 None:intergenic 45.0%
CCAATCATGTGCTTGAGGAT+TGG + chr4.1:88698780-88698799 MS.gene034252:intron 45.0%
CCAATCCTCAAGCACATGAT+TGG - chr4.1:88698783-88698802 None:intergenic 45.0%
CCGGAATATTTGAGCCAGTT+TGG - chr4.1:88698685-88698704 None:intergenic 45.0%
CGCGGTTCAAATAGTAGTTG+TGG + chr4.1:88697759-88697778 MS.gene034252:intron 45.0%
CTATAAACTCAGCTCCAACC+TGG - chr4.1:88697907-88697926 None:intergenic 45.0%
GACAAATCGTTCCCCATTCA+GGG + chr4.1:88700444-88700463 MS.gene034252:intron 45.0%
GAGTATGTTGAGCATGACAG+TGG - chr4.1:88700599-88700618 None:intergenic 45.0%
GCAGAATCACAGTATGTCAC+CGG - chr4.1:88697699-88697718 None:intergenic 45.0%
GCTTGGCCATATTCAACTGA+AGG - chr4.1:88698331-88698350 None:intergenic 45.0%
GGCAAAGAGCAAGTGACTTT+AGG - chr4.1:88697434-88697453 None:intergenic 45.0%
GGCTTCAAATCTGAGAGAAC+TGG + chr4.1:88697329-88697348 MS.gene034252:CDS 45.0%
GTAACATGATGCAATGCAGG+TGG + chr4.1:88700546-88700565 MS.gene034252:intron 45.0%
GTCCATGCATGGTCAATTTC+AGG - chr4.1:88700389-88700408 None:intergenic 45.0%
GTGGTAACATGATGCAATGC+AGG + chr4.1:88700543-88700562 MS.gene034252:intron 45.0%
TCCCTGAAATTGACCATGCA+TGG + chr4.1:88700384-88700403 MS.gene034252:intron 45.0%
TGACAAATCGTTCCCCATTC+AGG + chr4.1:88700443-88700462 MS.gene034252:intron 45.0%
TTCATTGAAGCTCCAGTTGC+AGG - chr4.1:88701207-88701226 None:intergenic 45.0%
! ATGTGCTTGAGGATTGGTGT+AGG + chr4.1:88698786-88698805 MS.gene034252:intron 45.0%
! ATTCATGAGTGGTGGTGTCA+CGG + chr4.1:88698303-88698322 MS.gene034252:CDS 45.0%
! CAGGTTGGAGCTGAGTTTAT+AGG + chr4.1:88697905-88697924 MS.gene034252:intron 45.0%
! CTTTTCCACTCCACACTTCT+CGG - chr4.1:88701146-88701165 None:intergenic 45.0%
! GAAGACTGGACTTTGGAAGA+TGG + chr4.1:88697401-88697420 MS.gene034252:CDS 45.0%
! GTCACTTTAGTCCCTGAATG+GGG + chr4.1:88700218-88700237 MS.gene034252:intron 45.0%
! GTCACTTTAGTCCCTGAATG+GGG - chr4.1:88700237-88700218 None:intergenic 45.0%
!! ACCAAGAGCACCAAGAATAG+GGG - chr4.1:88701298-88701317 None:intergenic 45.0%
!! CACCAAGAGCACCAAGAATA+GGG - chr4.1:88701299-88701318 None:intergenic 45.0%
!! CATGTTTGTTGTCACTGCAG+TGG + chr4.1:88698384-88698403 MS.gene034252:CDS 45.0%
!! CTATTCTTGGTGCTCTTGGT+GGG + chr4.1:88701298-88701317 MS.gene034252:CDS 45.0%
!! GGACGGAGGGAGTATATTTT+TGG + chr4.1:88698704-88698723 MS.gene034252:intron 45.0%
!! TATTCTTGGTGCTCTTGGTG+GGG + chr4.1:88701299-88701318 MS.gene034252:CDS 45.0%
!! TCGGAGGTTTCTGGTTTGTT+CGG - chr4.1:88701127-88701146 None:intergenic 45.0%
!! AAAAAAAAAACAATTATTAA+AGG + chr4.1:88699365-88699384 MS.gene034252:intron 5.0%
AATGCAGGTGGGAGAACTTG+CGG + chr4.1:88700558-88700577 MS.gene034252:intron 50.0%
ATATACTGCAGGCCTGCAAC+TGG + chr4.1:88701192-88701211 MS.gene034252:intron 50.0%
ATGGGTCAGATATTCCGGGA+CGG - chr4.1:88698496-88698515 None:intergenic 50.0%
ATTGGATGTGCTGGAGCTAC+TGG + chr4.1:88698001-88698020 MS.gene034252:CDS 50.0%
CATATATACTCCCTCCGTCC+CGG + chr4.1:88698479-88698498 MS.gene034252:intron 50.0%
CTCAAATATTCCGGGACGGA+GGG + chr4.1:88698691-88698710 MS.gene034252:intron 50.0%
CTGGCTCAAATATTCCGGGA+CGG + chr4.1:88698687-88698706 MS.gene034252:intron 50.0%
GACGAATCGTTCCCCATTCA+GGG - chr4.1:88700232-88700251 None:intergenic 50.0%
GACTAACGGAGTCTGCATTC+AGG - chr4.1:88700325-88700344 None:intergenic 50.0%
GCAAATGAAATCGTGACGGC+TGG - chr4.1:88698085-88698104 None:intergenic 50.0%
GCTGGTCCTAGTGTTCTTAC+TGG - chr4.1:88701231-88701250 None:intergenic 50.0%
GTGACACCACCACTCATGAA+TGG - chr4.1:88698304-88698323 None:intergenic 50.0%
TCCTGTCCCTCTTGCCAAAA+AGG + chr4.1:88697460-88697479 MS.gene034252:CDS 50.0%
TGACGAATCGTTCCCCATTC+AGG - chr4.1:88700233-88700252 None:intergenic 50.0%
TGCTACAAGCCACCCTTTGA+TGG - chr4.1:88699053-88699072 None:intergenic 50.0%
! ACTCCTGGTGCTCCTCTTTT+TGG + chr4.1:88697305-88697324 MS.gene034252:CDS 50.0%
! TGAAGGCATGTGGTGGGATT+TGG + chr4.1:88699827-88699846 MS.gene034252:intron 50.0%
! TTTTGGCAAGAGGGACAGGA+GGG - chr4.1:88697460-88697479 None:intergenic 50.0%
!! ACCTTTTTGGCAAGAGGGAC+AGG - chr4.1:88697464-88697483 None:intergenic 50.0%
!! CAGGGGTAGAAGGTACTGAT+GGG - chr4.1:88697274-88697293 None:intergenic 50.0%
!! CCACCAAGAGCACCAAGAAT+AGG - chr4.1:88701300-88701319 None:intergenic 50.0%
!! CCTATTCTTGGTGCTCTTGG+TGG + chr4.1:88701297-88701316 MS.gene034252:CDS 50.0%
!! TTTTTGGCAAGAGGGACAGG+AGG - chr4.1:88697461-88697480 None:intergenic 50.0%
ACTCACAGCTCTTGTGTCGG+TGG - chr4.1:88698410-88698429 None:intergenic 55.0%
ATGCAGGTGGGAGAACTTGC+GGG + chr4.1:88700559-88700578 MS.gene034252:intron 55.0%
CCACACTTCTCGGAGGTTTC+TGG - chr4.1:88701136-88701155 None:intergenic 55.0%
CCAGAAACCTCCGAGAAGTG+TGG + chr4.1:88701133-88701152 MS.gene034252:intron 55.0%
GAAACTTCCAGGGGCAGAAG+AGG - chr4.1:88701382-88701401 None:intergenic 55.0%
GCTCAAATATTCCGGGACGG+AGG + chr4.1:88698690-88698709 MS.gene034252:intron 55.0%
GTCAGATATTCCGGGACGGA+GGG - chr4.1:88698492-88698511 None:intergenic 55.0%
GTTAAAGCCTCTTCTGCCCC+TGG + chr4.1:88701372-88701391 MS.gene034252:CDS 55.0%
TTCCACTCCACACTTCTCGG+AGG - chr4.1:88701143-88701162 None:intergenic 55.0%
TTTGGCAAGAGGGACAGGAG+GGG - chr4.1:88697459-88697478 None:intergenic 55.0%
! AACCTCCGAGAAGTGTGGAG+TGG + chr4.1:88701138-88701157 MS.gene034252:intron 55.0%
! CCTGGTGCTCCTCTTTTTGG+TGG + chr4.1:88697308-88697327 MS.gene034252:CDS 55.0%
!! CCACCAAAAAGAGGAGCACC+AGG - chr4.1:88697311-88697330 None:intergenic 55.0%
!! GCAGGGGTAGAAGGTACTGA+TGG - chr4.1:88697275-88697294 None:intergenic 55.0%
!! GCCCCTATTCTTGGTGCTCT+TGG + chr4.1:88701294-88701313 MS.gene034252:CDS 55.0%
AGAACTTGCGGGAATCGCGG+TGG + chr4.1:88700570-88700589 MS.gene034252:CDS 60.0%
GAACTTGCGGGAATCGCGGT+GGG + chr4.1:88700571-88700590 MS.gene034252:CDS 60.0%
GGGAGAACTTGCGGGAATCG+CGG + chr4.1:88700567-88700586 MS.gene034252:CDS 60.0%
GGTCAGATATTCCGGGACGG+AGG - chr4.1:88698493-88698512 None:intergenic 60.0%
TTGGCAAGAGGGACAGGAGG+GGG - chr4.1:88697458-88697477 None:intergenic 60.0%
!! AGAGGAGCACCAGGAGTACC+TGG - chr4.1:88697302-88697321 None:intergenic 60.0%
!! AGGAGCACCAGGAGTACCTG+GGG - chr4.1:88697300-88697319 None:intergenic 60.0%
!! AGGAGTACCTGGGGTAGCAG+GGG - chr4.1:88697291-88697310 None:intergenic 60.0%
!! CAGGAGTACCTGGGGTAGCA+GGG - chr4.1:88697292-88697311 None:intergenic 60.0%
!! GAGGAGCACCAGGAGTACCT+GGG - chr4.1:88697301-88697320 None:intergenic 60.0%
CCTGCTACCCCAGGTACTCC+TGG + chr4.1:88697290-88697309 MS.gene034252:CDS 65.0%
CCTGGGGTAGCAGGGGTAGA+AGG - chr4.1:88697284-88697303 None:intergenic 65.0%
CCTTCTACCCCTGCTACCCC+AGG + chr4.1:88697281-88697300 MS.gene034252:CDS 65.0%
!! CCAGGAGTACCTGGGGTAGC+AGG - chr4.1:88697293-88697312 None:intergenic 65.0%
!! CTTGGTGCTCTTGGTGGGGC+AGG + chr4.1:88701303-88701322 MS.gene034252:CDS 65.0%
GCAAGAGGGACAGGAGGGGG+AGG - chr4.1:88697455-88697474 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 88697254 88701410 88697254 ID=MS.gene034252
chr4.1 mRNA 88697254 88701410 88697254 ID=MS.gene034252.t1;Parent=MS.gene034252
chr4.1 exon 88697254 88697481 88697254 ID=MS.gene034252.t1.exon1;Parent=MS.gene034252.t1
chr4.1 CDS 88697254 88697481 88697254 ID=cds.MS.gene034252.t1;Parent=MS.gene034252.t1
chr4.1 exon 88697908 88698132 88697908 ID=MS.gene034252.t1.exon2;Parent=MS.gene034252.t1
chr4.1 CDS 88697908 88698132 88697908 ID=cds.MS.gene034252.t1;Parent=MS.gene034252.t1
chr4.1 exon 88698229 88698423 88698229 ID=MS.gene034252.t1.exon3;Parent=MS.gene034252.t1
chr4.1 CDS 88698229 88698423 88698229 ID=cds.MS.gene034252.t1;Parent=MS.gene034252.t1
chr4.1 exon 88700565 88700626 88700565 ID=MS.gene034252.t1.exon4;Parent=MS.gene034252.t1
chr4.1 CDS 88700565 88700626 88700565 ID=cds.MS.gene034252.t1;Parent=MS.gene034252.t1
chr4.1 exon 88701203 88701410 88701203 ID=MS.gene034252.t1.exon5;Parent=MS.gene034252.t1
chr4.1 CDS 88701203 88701410 88701203 ID=cds.MS.gene034252.t1;Parent=MS.gene034252.t1
Gene Sequence

>MS.gene034252

ATGGACAATGAGGAAATCCCATCAGTACCTTCTACCCCTGCTACCCCAGGTACTCCTGGTGCTCCTCTTTTTGGTGGCTTCAAATCTGAGAGAACTGGAAATGGTAGAAAGAACTCACTCCTCAAGAATTTAAAATGTTTTAGTGTTGAAGACTGGACTTTGGAAGATGGAGCCTTACCTAAAGTCACTTGCTCTTTGCCTCCCCCTCCTGTCCCTCTTGCCAAAAAGGTACATATTTTAATTAACATATCATATCATATATAATAAATCATGCATACACACATGTGCAATGATTTAAATCACATTCACATCTTAATTTTAAATGTTACAGAGAATTACGGTCAAGAATACATTAAGTGCGTGTTTAGAATCACTATGAGTTTAACGAAATCATACTAACATGATTTTTGTAAAGGTTTCAAAGTGTAACATTTTTTAAAATCCGGTGACATACTGTGATTCTGCCAAATTCACCCTAATTTTAACATGTACTAAAATTTGATGTCGCGGTTCAAATAGTAGTTGTGGATTTATTTTAAATTTTATAACCTTGTATAGTTTCATACATGGTAAAAAAGTTAATAGGGGTCCTATTTTTGATATATTGATGTGTTAAATAATGTAGTTGGGTTGATTAATGTAATCATTTACCAGGTTGGAGCTGAGTTTATAGGCACATACATTCTAATGTTTGCTGGAATAGCCACTGCAATTGTGAACCAAAAGATACATAACTCAGAAACACTAATTGGATGTGCTGGAGCTACTGGACTTGCTGTTATGATCATAATTTTATCAACTGGTCACATTTCTGGTGCTCATCTTAATCCAGCCGTCACGATTTCATTTGCTGCATTAAAACACTTCCCATGGAAAAATGTAACAACAAAAAAAAACCTTAAATTCATCTTCTAATTCAATTTTTAGACATGTTAATTAAAAAGTGCTTATTTTAATTTTGTGAATTAATTTTAGGTACCTTTGTATATTGCTGCACAAGTTTTGGCATCAATATGTGCTTCTTTTACTCTCAAAGGAGTTTTTCATCCATTCATGAGTGGTGGTGTCACGGTTCCTTCAGTTGAATATGGCCAAGCTTTTGCTTTAGAGTTTATTATCAGTTTTAATCTCATGTTTGTTGTCACTGCAGTGGCCACCGACACAAGAGCTGTGAGTATAATTATTTATCATATATCCATATTCTATTATAAGAACTTTAGTCTTGCATATATACTCCCTCCGTCCCGGAATATCTGACCCATTTACTAAAAAAAGTGTCCCAAAATAACTGAGCTATTTCAATTTTCAATACAACTTTCATCATTTCCAATACAATATAACTCTAATTAATACTACTTTCATCATTCCCAATTCAATATATTCCACTTTCCCCTTTATTTATACATTTTTCTTAATCTGTGTGAAAAACCAAACTGGCTCAAATATTCCGGGACGGAGGGAGTATATTTTTGGTTTGAATTGAATGCTATATGTATATGTATATACACTAGTAAAATATGTTAGAACCAATCATGTGCTTGAGGATTGGTGTAGGACAATAGTCTATACTTTGTTTAAGAAAATAAGGAAATGCAAATAAACAAGAGGAACTAAAATCAGCATATATATATATATAGGGTTTTGCTAGAAGACACCTTTTGTGAAGGAGTCTTTTAGCAAGTTATCCTATTGGCATTTGTTAAAAGACACCAACTAATTTTTATGAAGGTGTCTTTTAGCAAAGTTATAACTAAAAAGTGGATATCACACCTTAAGGTGTGACTTGCTAAAAGACACCATCAAAGGGTGGCTTGTAGCAAAACCCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGAAACAAATAAAGAGGGTACAGAAATGTATGTAGGCATGCAGTTTATGATTTGTAATTAGCACCCTTTCAGCACCAATCATTACTTTTGATATCTTATGATTCAAGCCACTAGGCTAGCTTTGTTCAATCAAGTATTATACTAGTAAGTACAAAAACAACAAAAAAAAAATTATAAAAGAAAAATTAATAGTTTACTCCATCAGAAATTGATTTCACAAAAAAAAAAAAAAAACAATTATTAAAGGTACAATTGTATATATGGATATATTAAGAATATATATTTTTTCATAATAAATTTCAAAAAAATACTAACATATGTCCTTATGGTATTTGTTAGTGTACTTAAGATAAAAAATTTATATTGTAAATTAAGTTTTTTATTTTTCAAAAAAATAAAATTGATATTTTTTTAAACATGATTATTATTTATAAATTTCTTATCATGTACTCTTAAATTATAAGTTAGCATGACCTTAAAATTGAATCCAAAAAGAGTCGACCAATAAGACATGCTTTTGTCCAAAAGGCTAAGATGAGAGTCAATGGAAAAGATATGTCAGCAGCTTTTGTCCTCACTAAATGGATATATAAAATTCGTTTTTTGTGACCACTAATTGTATCAATGAACATGCATACTGCATCCATGTTTTGCAGTGAGATATTTGACTCTATACTGATAATAGTTGAAGGCATGTGGTGGGATTTGGAATCTTTGCTTGTTGCATCAAATAATAACTATGCATAAATATTGAAAATAGTTTATTCGAAAAAATAGTATATCCTTACTGAACATGAACATGTAGAAACACATACTCCCTCTGTCTCATATATATCAACAAAAAAAAAAAAAAAATTCAATTAGAAGATTTAAAATAAATAAATAAATACAAGAAATTTTTAATAAATTCCACTTATTTAATTATATTGTGTTTGAAAAACTCTTTAGTTAATTAAAAAGTTAAATTTTATTAATCTAATTTATCTTTGTGAAACAAGTTTTGATAAATTACAATTTGGAGAATTTATTATTATTTGATATAGATAGATGAATCTCCATATTTTTGTCGGGGAATTAGTCACTTTAGTCCCTGAATGGGGAACGATTCGTCAATTTAGTCCCTGAATGCAGATAAATTGCAAAATAGTCCCTGAATGTAGACTTTGTTAGTCAATTTAGTCCCTGAATGCAGACTCCGTTAGTCAATTTAGTCCCTGAATGTAGACTTCGTTAGTCACTTTAGTCCCTGAAATTGACCATGCATGGACTGTTTTGCATATTATCTGCATTCAGGGACTAAATTGACAAATCGTTCCCCATTCAGGGACTAAAGTGACTAATTCCCCATTGTTTTTTTTGACAAAGGATCTCTTTATGAATTAATTAATGTCGATAATGACTTGTGGTAACATGATGCAATGCAGGTGGGAGAACTTGCGGGAATCGCGGTGGGAGCCACTGTCATGCTCAACATACTCATTGCTGGGTATGTTCCAACTTTCACTCCTCATTATTTTAATCACATTCGTGTTTATACAATTGATCTAATTGTATTGTGAATGTAAATATTTGTTTATCATCAATCATTACTAGACCATTAAATATATATTTTTATTATCAATCAAAATGTGTGTTTATCGTCCTCGTGAACATAACTCAATTGACAGATACGTTGCAAATTCTTAAGGTATGAAGTTCGAACTTGAGATTCCTCATTTGCTTTAAGAGTTAAATTTCTAGACACTAAAATATTTAGTGGAAAAAACACATTTGTATACCCGACAAAACAAATGATATAAACTTAACTAAGAGTGAGAAAGATCCAATATTCCATTTAGGCCTTGTTTCCTAACAGGATCTTATTGTTTGCAAATTTCTTTTCTTATCTCACACTTCTCGGATATTTTGGTTTGTCTAGATTTTGAAATTCAGACATGTAAAAAAGGTGTAAACACCTGTTTTTACGTGTATGTATTTTAAAATCCGAACAAACCAGAAACCTCCGAGAAGTGTGGAGTGGAAAAGAAACAATCTTATTGTTTTGACACTAAATATACTGCAGGCCTGCAACTGGAGCTTCAATGAATCCAGTAAGAACACTAGGACCAGCAATTGCTGCAAACAACTACAAAGGCATATGGCTATATCTCATAGCCCCTATTCTTGGTGCTCTTGGTGGGGCAGGAGCTTACACTGCTGTCAAGCTTCCTGATGAAGAGTTTAACTCTGAGGTTAAAGCCTCTTCTGCCCCTGGAAGTTTCAGAAGATGA
Protein sequence

>MS.gene034252.t1

MDNEEIPSVPSTPATPGTPGAPLFGGFKSERTGNGRKNSLLKNLKCFSVEDWTLEDGALPKVTCSLPPPPVPLAKKVGAEFIGTYILMFAGIATAIVNQKIHNSETLIGCAGATGLAVMIIILSTGHISGAHLNPAVTISFAALKHFPWKNVPLYIAAQVLASICASFTLKGVFHPFMSGGVTVPSVEYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGASMNPVRTLGPAIAANNYKGIWLYLIAPILGALGGAGAYTAVKLPDEEFNSEVKASSAPGSFRR