AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene034893

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034893.t1 MTR_1g060500 93.452 336 19 1 1 333 24 359 0.0 656
MS.gene034893.t1 MTR_1g060490 76.061 330 74 2 4 333 24 348 0.0 524
MS.gene034893.t1 MTR_1g060520 72.072 333 60 2 1 333 24 323 8.91e-175 487
MS.gene034893.t1 MTR_7g104220 59.561 319 121 5 17 333 42 354 8.38e-136 390
MS.gene034893.t1 MTR_1g092740 48.726 314 144 6 17 324 38 340 6.62e-102 303
MS.gene034893.t1 MTR_1g092760 45.062 324 162 5 15 333 37 349 2.50e-89 271
MS.gene034893.t1 MTR_1g092750 45.312 320 157 6 12 324 35 343 1.53e-88 270
MS.gene034893.t1 MTR_1g092690 43.396 318 164 5 12 324 46 352 5.78e-86 263
MS.gene034893.t1 MTR_1g060530 82.143 84 15 0 158 241 31 114 1.23e-43 147
MS.gene034893.t1 MTR_2g044100 32.407 324 172 13 18 313 44 348 1.03e-33 128
MS.gene034893.t1 MTR_3g098270 30.530 321 185 12 18 314 35 341 2.54e-33 127
MS.gene034893.t1 MTR_8g022810 27.744 328 205 13 16 323 40 355 2.01e-31 121
MS.gene034893.t1 MTR_3g082830 30.117 342 194 11 18 333 39 361 2.18e-31 121
MS.gene034893.t1 MTR_5g084770 30.499 341 185 15 18 328 29 347 9.27e-31 119
MS.gene034893.t1 MTR_5g084750 30.063 316 188 11 18 313 31 333 9.83e-31 119
MS.gene034893.t1 MTR_8g031390 29.430 316 189 12 18 315 38 337 1.02e-30 120
MS.gene034893.t1 MTR_5g084790 30.878 353 194 14 10 332 22 354 1.02e-30 119
MS.gene034893.t1 MTR_4g035353 29.394 330 189 14 18 319 32 345 1.45e-30 119
MS.gene034893.t1 MTR_5g009100 29.968 317 183 13 19 312 48 348 8.12e-30 117
MS.gene034893.t1 MTR_1g092710 35.859 198 92 7 130 324 3 168 9.75e-30 112
MS.gene034893.t1 MTR_8g031400 29.114 316 191 12 18 315 38 338 1.59e-28 113
MS.gene034893.t1 MTR_3g005660 28.793 323 186 12 18 313 37 342 2.73e-28 113
MS.gene034893.t1 MTR_7g116870 27.492 331 198 11 16 315 32 351 1.26e-27 111
MS.gene034893.t1 MTR_8g022790 30.476 315 180 12 18 313 38 332 1.99e-27 110
MS.gene034893.t1 MTR_8g028160 25.893 336 201 10 16 315 35 358 2.85e-27 110
MS.gene034893.t1 MTR_2g015080 29.275 345 202 17 4 320 27 357 3.07e-27 110
MS.gene034893.t1 MTR_8g075230 28.528 326 204 12 12 319 31 345 6.03e-27 109
MS.gene034893.t1 MTR_3g024510 25.959 339 209 11 19 331 40 362 7.08e-27 109
MS.gene034893.t1 MTR_8g031430 29.114 316 191 13 18 315 38 338 1.18e-26 108
MS.gene034893.t1 MTR_5g022630 30.275 327 195 12 12 317 38 352 3.32e-26 107
MS.gene034893.t1 MTR_0565s0010 25.882 340 209 13 19 331 34 357 1.47e-25 105
MS.gene034893.t1 MTR_3g464730 28.655 342 198 11 18 332 29 351 2.80e-25 104
MS.gene034893.t1 MTR_7g116510 25.904 332 210 12 16 325 24 341 3.23e-25 104
MS.gene034893.t1 MTR_3g021460 27.707 314 188 10 18 314 32 323 5.48e-25 103
MS.gene034893.t1 MTR_1g079540 26.190 336 205 12 13 323 27 344 6.86e-25 103
MS.gene034893.t1 MTR_2g017965 29.012 324 182 15 18 317 34 333 1.16e-24 103
MS.gene034893.t1 MTR_5g083040 25.378 331 211 9 15 321 30 348 1.62e-24 102
MS.gene034893.t1 MTR_8g031390 29.433 282 170 11 18 281 38 308 1.83e-24 101
MS.gene034893.t1 MTR_1g069175 25.439 342 222 12 3 323 19 348 2.58e-24 102
MS.gene034893.t1 MTR_1g025760 27.083 336 210 13 18 332 81 402 2.61e-24 102
MS.gene034893.t1 MTR_7g116520 26.543 324 193 11 16 313 33 337 2.74e-24 102
MS.gene034893.t1 MTR_0009s0250 27.129 317 198 13 18 320 34 331 3.17e-24 101
MS.gene034893.t1 MTR_2g461580 26.625 323 197 11 18 323 32 331 4.56e-24 101
MS.gene034893.t1 MTR_3g052580 25.305 328 209 14 18 323 29 342 4.95e-24 101
MS.gene034893.t1 MTR_3g052580 25.305 328 209 14 18 323 28 341 5.85e-24 101
MS.gene034893.t1 MTR_8g031420 27.500 320 191 13 18 315 36 336 8.66e-24 100
MS.gene034893.t1 MTR_1g079530 26.829 328 201 11 16 323 28 336 1.32e-23 100
MS.gene034893.t1 MTR_5g022640 27.607 326 204 11 12 317 38 351 2.02e-23 99.8
MS.gene034893.t1 MTR_3g052490 26.911 327 206 14 18 323 33 347 2.06e-23 99.8
MS.gene034893.t1 MTR_8g079050 24.926 337 211 13 19 327 39 361 5.05e-23 98.6
MS.gene034893.t1 MTR_2g033930 29.022 317 193 15 18 315 33 336 5.41e-23 98.2
MS.gene034893.t1 MTR_3g114090 27.011 348 219 15 5 332 26 358 1.34e-22 97.1
MS.gene034893.t1 MTR_3g052480 26.364 330 205 15 18 323 34 349 1.48e-22 97.1
MS.gene034893.t1 MTR_2g084585 27.914 326 202 12 18 323 31 343 1.52e-22 97.1
MS.gene034893.t1 MTR_3g005650 26.019 319 196 11 17 314 30 329 1.95e-22 96.7
MS.gene034893.t1 MTR_5g074270 27.976 336 195 17 18 324 34 351 3.43e-22 96.3
MS.gene034893.t1 MTR_4g056160 28.261 322 191 13 18 314 28 334 3.96e-22 95.9
MS.gene034893.t1 MTR_4g108690 26.074 326 212 10 19 326 29 343 7.92e-22 95.1
MS.gene034893.t1 MTR_4g056280 29.022 317 192 13 18 314 31 334 9.53e-22 94.7
MS.gene034893.t1 MTR_2g017955 28.571 322 189 13 18 319 34 334 1.99e-21 94.4
MS.gene034893.t1 MTR_1g025720 25.970 335 214 12 18 332 38 358 3.31e-21 93.2
MS.gene034893.t1 MTR_1g025780 24.179 335 219 12 18 332 42 361 3.63e-21 93.2
MS.gene034893.t1 MTR_1g030275 25.215 349 219 12 5 323 29 365 3.68e-21 93.6
MS.gene034893.t1 MTR_5g078210 25.076 327 203 13 19 322 27 334 6.54e-21 92.4
MS.gene034893.t1 MTR_1g030230 23.729 354 222 12 5 324 22 361 9.83e-21 92.0
MS.gene034893.t1 MTR_7g116500 26.332 319 200 12 15 312 31 335 1.37e-20 91.7
MS.gene034893.t1 MTR_1g030220 25.439 342 209 10 16 323 39 368 1.64e-20 91.7
MS.gene034893.t1 MTR_1g025680 28.076 317 195 14 18 314 35 338 1.70e-20 92.0
MS.gene034893.t1 MTR_1g025700 26.347 334 212 14 18 331 51 370 1.75e-20 91.3
MS.gene034893.t1 MTR_8g089805 23.464 358 219 10 5 323 30 371 2.17e-20 91.3
MS.gene034893.t1 MTR_8g075220 27.299 348 203 15 12 328 35 363 4.04e-20 90.5
MS.gene034893.t1 MTR_2g100620 28.173 323 190 12 18 315 32 337 4.44e-20 90.1
MS.gene034893.t1 MTR_8g087890 24.085 328 193 12 19 315 33 335 5.51e-20 89.7
MS.gene034893.t1 MTR_7g033150 24.709 344 214 9 16 323 34 368 6.43e-20 90.1
MS.gene034893.t1 MTR_3g435540 25.532 329 210 11 19 326 25 339 6.96e-20 89.7
MS.gene034893.t1 MTR_2g015580 25.076 331 213 9 16 319 46 368 9.42e-20 89.7
MS.gene034893.t1 MTR_3g438030 27.089 347 196 15 14 323 27 353 1.18e-19 89.0
MS.gene034893.t1 MTR_2g015630 26.113 337 204 13 22 325 36 360 1.19e-19 89.4
MS.gene034893.t1 MTR_8g087870 28.616 318 179 15 18 313 30 321 1.22e-19 88.6
MS.gene034893.t1 MTR_4g122200 27.964 329 197 16 19 323 37 349 1.44e-19 88.6
MS.gene034893.t1 MTR_8g075200 27.326 344 203 14 12 328 36 359 1.98e-19 88.6
MS.gene034893.t1 MTR_4g019880 25.387 323 202 12 15 313 30 337 2.39e-19 88.2
MS.gene034893.t1 MTR_1g025910 25.610 328 213 9 22 331 41 355 2.75e-19 88.2
MS.gene034893.t1 MTR_8g014910 27.545 334 194 13 18 323 33 346 2.84e-19 87.8
MS.gene034893.t1 MTR_1g030268 25.429 350 219 13 5 324 30 367 4.15e-19 87.8
MS.gene034893.t1 MTR_3g023220 28.528 326 171 18 18 315 34 325 5.65e-19 87.0
MS.gene034893.t1 MTR_2g015670 26.409 337 201 13 13 323 27 342 8.21e-19 86.7
MS.gene034893.t1 MTR_2g017925 28.076 317 184 12 18 314 34 326 1.18e-18 86.3
MS.gene034893.t1 MTR_4g104240 25.641 351 193 15 12 321 34 357 2.25e-18 85.5
MS.gene034893.t1 MTR_3g448360 25.513 341 210 13 14 323 26 353 2.38e-18 85.1
MS.gene034893.t1 MTR_5g093090 25.705 319 204 13 18 315 29 335 2.46e-18 85.1
MS.gene034893.t1 MTR_2g015590 25.680 331 204 10 16 315 30 349 1.95e-17 82.8
MS.gene034893.t1 MTR_2g015650 25.648 347 205 12 13 323 27 356 2.83e-17 82.0
MS.gene034893.t1 MTR_3g069520 26.113 337 202 14 14 319 27 347 7.13e-17 80.9
MS.gene034893.t1 MTR_8g022810 31.500 200 115 9 16 199 40 233 2.77e-16 79.0
MS.gene034893.t1 MTR_7g113860 25.698 358 213 15 3 323 17 358 5.46e-16 78.6
MS.gene034893.t1 MTR_7g008060 23.476 328 205 11 16 323 32 333 5.98e-16 78.2
MS.gene034893.t1 MTR_0029s0050 25.369 339 196 15 16 323 29 341 8.74e-16 77.8
MS.gene034893.t1 MTR_2g017875 26.536 358 188 17 18 331 35 361 9.93e-16 77.4
MS.gene034893.t1 MTR_0029s0100 26.393 341 190 16 16 323 29 341 1.31e-15 77.0
MS.gene034893.t1 MTR_5g078210 25.188 266 167 10 19 261 27 283 2.39e-15 76.3
MS.gene034893.t1 MTR_2g043980 25.434 346 197 14 5 319 24 339 2.50e-15 76.3
MS.gene034893.t1 MTR_8g074560 25.857 321 200 13 18 313 32 339 1.35e-14 74.3
MS.gene034893.t1 MTR_2g017915 24.845 322 175 11 18 316 34 311 3.03e-14 73.2
MS.gene034893.t1 MTR_8g038680 22.647 340 214 11 14 315 20 348 5.07e-14 72.4
MS.gene034893.t1 MTR_6g007095 23.032 343 222 10 3 313 22 354 7.54e-14 72.8
MS.gene034893.t1 MTR_7g111780 24.773 331 189 11 18 315 37 340 3.67e-13 70.1
MS.gene034893.t1 MTR_2g015590 25.912 274 170 7 16 261 30 298 6.45e-13 68.9
MS.gene034893.t1 MTR_6g007100 22.796 329 194 13 18 313 34 335 2.11e-12 67.8
MS.gene034893.t1 MTR_1g082390 29.153 295 171 15 3 271 19 301 3.77e-12 67.0
MS.gene034893.t1 MTR_7g113860 24.581 358 217 15 3 323 23 364 7.88e-12 66.2
MS.gene034893.t1 MTR_1g079590 28.652 178 104 8 13 171 27 200 1.04e-11 63.9
MS.gene034893.t1 MTR_6g007090 22.289 332 207 10 18 315 40 354 1.07e-11 65.5
MS.gene034893.t1 MTR_7g033165 23.952 334 205 13 18 315 34 354 1.50e-11 65.1
MS.gene034893.t1 MTR_5g093090 25.660 265 176 10 18 263 29 291 2.24e-11 64.3
MS.gene034893.t1 MTR_1g030268 25.524 286 171 11 5 261 30 302 3.06e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034893.t1 AT5G03610 52.870 331 143 7 2 325 26 350 1.39e-115 338
MS.gene034893.t1 AT3G09930 48.254 315 151 7 17 325 39 347 3.13e-102 305
MS.gene034893.t1 AT3G09930 48.254 315 151 7 17 325 39 347 3.13e-102 305
MS.gene034893.t1 AT5G03600 43.293 328 161 11 5 323 35 346 1.53e-80 249
MS.gene034893.t1 AT5G03600 43.252 326 160 11 7 323 2 311 1.78e-80 248
MS.gene034893.t1 AT2G36325 38.535 314 176 9 17 323 47 350 9.44e-72 226
MS.gene034893.t1 AT5G03590 36.735 294 133 9 38 325 7 253 3.72e-58 189
MS.gene034893.t1 AT5G03590 31.058 293 120 9 38 325 7 222 3.68e-43 149
MS.gene034893.t1 AT5G03590 44.509 173 84 6 12 176 25 193 1.40e-36 130
MS.gene034893.t1 AT1G53920 29.755 326 192 12 18 321 49 359 1.88e-33 127
MS.gene034893.t1 AT2G40250 29.394 330 196 11 14 319 33 349 3.44e-31 120
MS.gene034893.t1 AT5G41890 29.721 323 194 13 19 315 33 348 6.94e-31 120
MS.gene034893.t1 AT1G20130 30.861 337 197 10 18 329 185 510 8.48e-31 122
MS.gene034893.t1 AT1G20130 30.564 337 198 10 18 329 205 530 1.32e-30 121
MS.gene034893.t1 AT5G08460 29.412 323 187 14 18 314 50 357 4.65e-30 118
MS.gene034893.t1 AT2G04570 29.730 333 187 12 18 323 29 341 9.62e-30 116
MS.gene034893.t1 AT1G28640 27.246 334 193 12 16 314 34 352 4.75e-29 115
MS.gene034893.t1 AT4G10950 29.141 326 180 14 18 314 72 375 1.00e-28 115
MS.gene034893.t1 AT2G31540 28.571 343 198 13 12 324 26 351 1.27e-28 114
MS.gene034893.t1 AT1G58430 29.341 334 195 13 18 326 36 353 2.11e-28 113
MS.gene034893.t1 AT2G30310 28.060 335 198 14 18 326 35 352 6.88e-28 112
MS.gene034893.t1 AT3G14820 28.358 335 213 10 7 326 22 344 1.10e-27 111
MS.gene034893.t1 AT2G19060 28.344 314 196 11 19 319 32 329 3.83e-27 109
MS.gene034893.t1 AT5G40990 29.630 324 183 13 18 313 38 344 3.88e-27 110
MS.gene034893.t1 AT5G42170 27.640 322 205 10 18 323 51 360 9.70e-27 108
MS.gene034893.t1 AT2G03980 27.445 317 193 12 18 313 44 344 1.29e-26 108
MS.gene034893.t1 AT2G03980 27.445 317 193 12 18 313 44 344 1.29e-26 108
MS.gene034893.t1 AT2G03980 27.445 317 193 12 18 313 44 344 1.29e-26 108
MS.gene034893.t1 AT2G03980 27.445 317 193 12 18 313 44 344 1.29e-26 108
MS.gene034893.t1 AT1G71250 26.875 320 195 11 17 313 41 344 2.10e-26 108
MS.gene034893.t1 AT1G29660 27.941 340 201 16 19 331 34 356 3.17e-26 107
MS.gene034893.t1 AT3G14225 28.529 340 200 14 3 313 23 348 3.22e-26 107
MS.gene034893.t1 AT4G10950 28.834 326 177 15 18 314 72 371 3.34e-26 107
MS.gene034893.t1 AT4G26790 28.402 338 195 12 18 328 30 347 5.06e-26 106
MS.gene034893.t1 AT4G26790 28.402 338 195 12 18 328 30 347 5.06e-26 106
MS.gene034893.t1 AT5G33370 26.316 342 217 12 3 323 16 343 6.38e-26 106
MS.gene034893.t1 AT1G06990 26.852 324 195 11 18 316 38 344 6.97e-26 106
MS.gene034893.t1 AT1G71691 27.160 324 183 10 18 313 56 354 7.09e-26 106
MS.gene034893.t1 AT3G14225 28.869 336 200 14 3 313 23 344 7.83e-26 106
MS.gene034893.t1 AT1G20132 27.515 338 216 11 12 331 56 382 8.63e-26 106
MS.gene034893.t1 AT2G27360 27.405 343 192 10 16 319 32 356 9.19e-26 106
MS.gene034893.t1 AT1G33811 26.316 323 196 9 18 313 35 342 1.07e-25 105
MS.gene034893.t1 AT1G75890 29.518 332 190 13 12 317 42 355 1.44e-25 105
MS.gene034893.t1 AT5G15720 28.173 323 193 13 15 313 28 335 1.51e-25 105
MS.gene034893.t1 AT1G54020 30.094 319 190 13 12 318 28 325 1.88e-25 105
MS.gene034893.t1 AT1G75890 29.518 332 190 13 12 317 71 384 2.94e-25 105
MS.gene034893.t1 AT1G59406 26.239 343 221 11 7 331 20 348 9.79e-25 103
MS.gene034893.t1 AT1G59030 26.239 343 221 11 7 331 20 348 9.79e-25 103
MS.gene034893.t1 AT1G58725 26.239 343 221 11 7 331 20 348 9.79e-25 103
MS.gene034893.t1 AT5G18430 27.778 324 191 11 16 313 27 333 1.15e-24 103
MS.gene034893.t1 AT5G45950 27.083 336 214 12 1 319 22 343 1.97e-24 102
MS.gene034893.t1 AT1G54030 28.155 309 188 11 15 313 50 334 2.18e-24 103
MS.gene034893.t1 AT5G22810 29.874 318 193 10 18 315 35 342 4.22e-24 101
MS.gene034893.t1 AT1G75920 27.193 342 204 12 3 323 17 334 5.66e-24 100
MS.gene034893.t1 AT2G24560 27.616 344 188 16 18 326 35 352 7.01e-24 100
MS.gene034893.t1 AT1G75930 27.300 337 206 10 12 331 24 338 7.49e-24 100
MS.gene034893.t1 AT2G42990 28.173 323 185 11 18 313 29 331 8.57e-24 100
MS.gene034893.t1 AT1G20135 27.044 318 195 9 18 319 30 326 1.32e-23 99.8
MS.gene034893.t1 AT1G75890 28.490 351 182 13 12 317 42 368 1.66e-23 100
MS.gene034893.t1 AT4G01130 28.190 337 192 14 16 315 33 356 1.77e-23 100
MS.gene034893.t1 AT1G29670 26.331 338 206 13 18 329 33 353 1.82e-23 99.8
MS.gene034893.t1 AT1G28650 25.073 343 207 12 16 323 36 363 2.65e-23 99.8
MS.gene034893.t1 AT1G73610 27.576 330 189 13 12 319 30 331 2.77e-23 99.0
MS.gene034893.t1 AT2G30220 26.567 335 203 14 18 326 34 351 3.49e-23 99.0
MS.gene034893.t1 AT1G75900 25.970 335 214 10 18 332 44 364 3.64e-23 99.0
MS.gene034893.t1 AT5G33370 30.315 254 153 9 3 236 16 265 6.20e-23 97.8
MS.gene034893.t1 AT1G29670 26.331 338 206 13 18 329 101 421 7.18e-23 99.0
MS.gene034893.t1 AT3G48460 29.155 343 193 15 10 319 31 356 7.43e-23 98.2
MS.gene034893.t1 AT1G58520 25.797 345 205 11 11 331 24 341 8.22e-23 97.4
MS.gene034893.t1 AT1G58525 25.797 345 205 11 11 331 24 341 8.22e-23 97.4
MS.gene034893.t1 AT3G53100 26.032 315 204 11 18 314 30 333 8.87e-23 97.8
MS.gene034893.t1 AT1G28570 24.926 337 207 12 13 316 30 353 1.28e-22 97.8
MS.gene034893.t1 AT4G28780 26.807 332 208 11 13 323 27 344 1.29e-22 97.4
MS.gene034893.t1 AT5G45960 26.254 339 207 12 13 324 43 365 1.57e-22 97.4
MS.gene034893.t1 AT1G53940 27.358 318 198 12 18 313 40 346 2.07e-22 97.1
MS.gene034893.t1 AT1G54000 28.617 311 194 12 12 310 31 325 2.61e-22 97.1
MS.gene034893.t1 AT5G45910 28.242 347 196 13 16 323 29 361 3.65e-22 96.3
MS.gene034893.t1 AT1G28610 26.554 354 191 15 16 325 30 358 4.26e-22 96.3
MS.gene034893.t1 AT1G75880 27.761 335 201 10 18 328 53 370 4.28e-22 95.9
MS.gene034893.t1 AT1G28670 24.412 340 206 12 16 319 34 358 6.54e-22 95.5
MS.gene034893.t1 AT3G04290 25.075 335 206 11 15 323 27 342 7.58e-22 95.1
MS.gene034893.t1 AT5G45670 24.611 321 201 12 19 315 31 334 1.33e-21 94.4
MS.gene034893.t1 AT1G28600 24.484 339 205 12 16 319 30 352 1.41e-21 94.7
MS.gene034893.t1 AT3G16370 27.217 327 188 13 18 315 31 336 1.73e-21 94.0
MS.gene034893.t1 AT1G54010 27.532 316 201 12 12 315 31 330 2.11e-21 94.4
MS.gene034893.t1 AT1G28590 24.058 345 212 10 16 325 35 364 3.89e-21 93.6
MS.gene034893.t1 AT1G75880 27.356 329 211 11 18 328 53 371 4.26e-21 93.2
MS.gene034893.t1 AT5G15720 28.519 270 164 11 15 261 28 291 5.44e-21 92.0
MS.gene034893.t1 AT3G14220 27.358 318 199 15 18 321 33 332 6.45e-21 92.4
MS.gene034893.t1 AT1G71691 28.205 273 151 9 17 261 55 310 1.31e-20 90.9
MS.gene034893.t1 AT1G28580 24.702 336 203 11 16 316 36 356 1.91e-20 91.7
MS.gene034893.t1 AT1G71120 24.047 341 215 14 18 331 32 355 1.96e-20 91.3
MS.gene034893.t1 AT5G55050 24.251 334 221 12 18 329 40 363 3.00e-20 90.9
MS.gene034893.t1 AT1G75920 26.050 357 204 13 3 323 12 344 3.30e-20 90.5
MS.gene034893.t1 AT2G19010 27.389 314 189 14 18 314 31 322 3.49e-20 90.5
MS.gene034893.t1 AT3G14210 26.198 313 203 12 14 313 33 330 5.57e-20 90.1
MS.gene034893.t1 AT2G19010 27.389 314 189 14 18 314 61 352 8.27e-20 89.7
MS.gene034893.t1 AT1G74460 24.924 329 212 12 19 326 25 339 9.37e-20 89.4
MS.gene034893.t1 AT4G18970 23.824 319 204 11 19 314 30 332 1.00e-19 89.4
MS.gene034893.t1 AT2G19050 27.097 310 195 12 19 315 33 324 1.19e-19 89.0
MS.gene034893.t1 AT1G54030 29.675 246 153 9 15 252 50 283 1.21e-19 88.2
MS.gene034893.t1 AT3G50400 24.074 324 207 11 19 315 36 347 1.33e-19 89.0
MS.gene034893.t1 AT4G18970 23.824 319 204 11 19 314 30 332 1.37e-19 89.4
MS.gene034893.t1 AT1G23500 25.705 319 198 8 18 319 36 332 1.70e-19 88.2
MS.gene034893.t1 AT1G75910 24.852 338 212 11 7 323 18 334 2.03e-19 88.2
MS.gene034893.t1 AT5G37690 23.692 325 213 12 19 323 29 338 3.79e-19 87.4
MS.gene034893.t1 AT5G03820 27.134 328 204 13 18 323 34 348 1.69e-18 85.5
MS.gene034893.t1 AT5G03820 27.439 328 203 13 18 323 62 376 2.16e-18 85.5
MS.gene034893.t1 AT1G67830 23.099 342 216 11 18 323 31 361 2.24e-18 85.5
MS.gene034893.t1 AT2G24560 28.975 283 152 14 18 267 35 301 3.13e-18 84.3
MS.gene034893.t1 AT1G31550 24.419 344 211 10 16 325 35 363 5.62e-18 84.3
MS.gene034893.t1 AT5G03810 26.300 327 209 12 17 323 30 344 9.05e-18 83.6
MS.gene034893.t1 AT2G19050 30.041 243 151 10 19 248 33 269 1.67e-17 81.6
MS.gene034893.t1 AT1G54790 26.567 335 205 12 21 323 36 361 1.73e-17 82.8
MS.gene034893.t1 AT1G53940 28.352 261 166 9 18 261 40 296 2.19e-17 81.6
MS.gene034893.t1 AT1G75920 25.581 301 183 10 42 323 28 306 2.73e-17 81.6
MS.gene034893.t1 AT4G01130 28.986 276 155 11 16 261 33 297 7.64e-17 80.5
MS.gene034893.t1 AT4G30140 25.649 308 196 12 19 313 35 322 8.96e-17 80.5
MS.gene034893.t1 AT1G31550 24.709 344 207 12 16 325 35 360 1.81e-16 80.1
MS.gene034893.t1 AT5G14450 25.223 337 197 13 18 315 42 362 1.93e-16 80.1
MS.gene034893.t1 AT1G28660 23.442 337 201 13 21 319 39 356 2.73e-16 79.3
MS.gene034893.t1 AT1G28660 23.145 337 203 13 21 319 39 357 6.04e-16 78.6
MS.gene034893.t1 AT2G04020 26.415 212 136 7 18 214 44 250 7.41e-16 76.6
MS.gene034893.t1 AT3G26430 22.714 339 221 9 18 323 32 362 1.58e-15 77.0
MS.gene034893.t1 AT5G63170 24.127 315 202 10 18 316 29 322 1.72e-15 76.6
MS.gene034893.t1 AT1G75920 25.076 331 194 14 3 323 17 303 2.02e-15 76.3
MS.gene034893.t1 AT2G04020 27.094 203 128 7 18 205 44 241 2.33e-15 76.3
MS.gene034893.t1 AT1G56670 24.699 332 198 9 18 319 41 350 2.92e-15 76.3
MS.gene034893.t1 AT5G37690 23.344 317 200 13 19 315 29 322 2.09e-14 73.6
MS.gene034893.t1 AT2G31550 25.980 204 123 8 134 324 22 210 1.61e-13 69.3
MS.gene034893.t1 AT1G71691 25.926 189 117 5 134 313 79 253 2.24e-13 69.7
MS.gene034893.t1 AT4G16230 30.049 203 113 8 19 199 32 227 1.06e-12 67.4
MS.gene034893.t1 AT1G09390 22.630 327 211 9 18 319 38 347 2.54e-12 67.4
MS.gene034893.t1 AT1G56670 25.556 270 157 7 11 248 26 283 6.65e-12 65.9
MS.gene034893.t1 AT5G15720 24.542 273 170 11 65 315 48 306 2.45e-11 64.3

Find 75 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCAATCACTCACAATTTA+TGG 0.125010 1.2:-46627342 MS.gene034893:CDS
ATCCAGAATCAAGTTTCTTT+TGG 0.188004 1.2:-46625279 MS.gene034893:CDS
ATATTGTGCAGCCAAGTATT+TGG 0.194450 1.2:-46627374 MS.gene034893:intron
AAATGACTACAATTATTATT+TGG 0.197824 1.2:-46627125 MS.gene034893:CDS
CCTAAGCATGATTTGAAGTA+TGG 0.231574 1.2:-46627304 MS.gene034893:CDS
TTGATTTGGGTTGTCACATT+TGG 0.238521 1.2:+46627229 None:intergenic
TACTTTCCATGAATCAAATA+TGG 0.261137 1.2:+46627693 None:intergenic
TTCTTGAATGAGCTTGATTA+AGG 0.268085 1.2:+46627204 None:intergenic
TCCCAAAAGAAACTTGATTC+TGG 0.276425 1.2:+46625277 None:intergenic
TGGTGTAATCATTGGTTTCT+TGG 0.320591 1.2:+46625476 None:intergenic
TACAATTATTATTTGGAAAC+AGG 0.326642 1.2:-46627118 MS.gene034893:CDS
GATTCATGGAAAGTACCTTA+TGG 0.338294 1.2:-46627685 MS.gene034893:CDS
TGATTTGGGTTGTCACATTT+GGG 0.340075 1.2:+46627230 None:intergenic
GCTTGATTAAGGAATTGATT+TGG 0.343968 1.2:+46627215 None:intergenic
CTTGATTAAGGAATTGATTT+GGG 0.349009 1.2:+46627216 None:intergenic
CCTTATGGCATGACCTTTCC+CGG 0.349880 1.2:-46627670 MS.gene034893:CDS
TCCTCAATGTTATGGCTAGA+AGG 0.358556 1.2:+46625403 None:intergenic
TATTGTGCAGCCAAGTATTT+GGG 0.361299 1.2:-46627373 MS.gene034893:intron
GTAGCTTATGTCTCTGTTGC+TGG 0.378940 1.2:-46627148 MS.gene034893:CDS
GTACTTGAAGTATCTTCTAT+TGG 0.380865 1.2:-46627253 MS.gene034893:CDS
TCAAACGTTCCTCAATGTTA+TGG 0.386495 1.2:+46625395 None:intergenic
TTGTAACAGATTGGTTCAAT+AGG 0.388744 1.2:+46625506 None:intergenic
TTGATTCATCTTCAAAGCTT+AGG 0.395738 1.2:-46625649 MS.gene034893:CDS
GCTTTGAAGATGAATCAAAT+TGG 0.421198 1.2:+46625654 None:intergenic
GGTTCAACTTTGTAACAGAT+TGG 0.423602 1.2:+46625497 None:intergenic
ATCACTGATTCAATGAAAGA+TGG 0.426419 1.2:+46625691 None:intergenic
TGATTTCAATCCCAAATACT+TGG 0.428800 1.2:+46627363 None:intergenic
CCGGGAAAGGTCATGCCATA+AGG 0.446049 1.2:+46627670 None:intergenic
TTCCATAAATTGTGAGTGAT+TGG 0.450712 1.2:+46627340 None:intergenic
AACTTTGCCTACGGTGGTAC+AGG 0.462242 1.2:-46627277 MS.gene034893:CDS
AGAGACATAAGCTACAGATT+TGG 0.467339 1.2:+46627156 None:intergenic
CATTCCAACCAGCCTGTGTT+GGG 0.469175 1.2:+46625245 None:intergenic
TGTGAATGTGGTGTAATCAT+TGG 0.470335 1.2:+46625468 None:intergenic
GGAGATTCGTATGTTGATAC+CGG 0.482141 1.2:-46627730 MS.gene034893:CDS
CCGTCGGAGAATCTCCCAAC+TGG 0.483926 1.2:+46627643 None:intergenic
AGGATTTGAGAGAATTGTTG+TGG 0.484724 1.2:-46625629 MS.gene034893:CDS
ACTATTGCAACTTTGAAATG+AGG 0.493039 1.2:+46625561 None:intergenic
GGATTTGAGAGAATTGTTGT+GGG 0.499111 1.2:-46625628 MS.gene034893:CDS
CGTTTGAAGCCATGTTGCGT+TGG 0.507426 1.2:-46625379 MS.gene034893:CDS
GTGGGAGGTTTACAACCCCT+TGG 0.513522 1.2:-46625610 MS.gene034893:CDS
ACAGATTTGGTGATATCTAA+AGG 0.513990 1.2:+46627169 None:intergenic
CCATACTTCAAATCATGCTT+AGG 0.514717 1.2:+46627304 None:intergenic
ATTGGTTCAATAGGTTGTTG+TGG 0.520697 1.2:+46625515 None:intergenic
ACCTTTCCCGGAAAACCAGT+TGG 0.523937 1.2:-46627658 MS.gene034893:CDS
GTAAGCAGTGAGTATAAATG+TGG 0.528517 1.2:-46625355 MS.gene034893:CDS
CCTTTCCCGGAAAACCAGTT+GGG 0.539582 1.2:-46627657 MS.gene034893:CDS
TCACTGATTCAATGAAAGAT+GGG 0.544882 1.2:+46625692 None:intergenic
GCATTCCAACCAGCCTGTGT+TGG 0.545563 1.2:+46625244 None:intergenic
CCTCAATGTTATGGCTAGAA+GGG 0.549531 1.2:+46625404 None:intergenic
GGCTTGAGGAAGACAACCAA+GGG 0.551381 1.2:+46625594 None:intergenic
TGCACCCAACACAGGCTGGT+TGG 0.551991 1.2:-46625249 MS.gene034893:CDS
GAATGCTGTGTATAATGAGT+TGG 0.561108 1.2:-46625227 MS.gene034893:CDS
TTTGAGAGAATTGTTGTGGG+AGG 0.562053 1.2:-46625625 MS.gene034893:CDS
CTGCTTACTCCAACGCAACA+TGG 0.568390 1.2:+46625370 None:intergenic
AGAAATGGGGCTGCAAGTTG+AGG 0.574508 1.2:-46627797 None:intergenic
TTGAAATGAGGTTTCAGCAG+TGG 0.574553 1.2:+46625573 None:intergenic
AATTATTATTTGGAAACAGG+AGG 0.583609 1.2:-46627115 MS.gene034893:CDS
CAGTTGCACCCAACACAGGC+TGG 0.587629 1.2:-46625253 MS.gene034893:CDS
TTGAAGATGAATCAAATTGG+TGG 0.592268 1.2:+46625657 None:intergenic
CTAAGCATGATTTGAAGTAT+GGG 0.594118 1.2:-46627303 MS.gene034893:CDS
CCCTTCTAGCCATAACATTG+AGG 0.594859 1.2:-46625404 MS.gene034893:CDS
GTCAGTTAAAACTCTGCCGT+CGG 0.606044 1.2:+46627627 None:intergenic
GGAAACAGGAGGCGCTGTGT+CGG 0.606261 1.2:-46627104 MS.gene034893:intron
GGTTGTTGTGGAGAGCTACA+AGG 0.616979 1.2:+46625527 None:intergenic
GAGGTTTCAGCAGTGGCTTG+AGG 0.618863 1.2:+46625580 None:intergenic
GGATCAGTTGCACCCAACAC+AGG 0.619543 1.2:-46625257 MS.gene034893:CDS
TATGGGATGAACTTTGCCTA+CGG 0.634972 1.2:-46627286 MS.gene034893:CDS
AGATTATAGAAATTTAAACA+AGG 0.656871 1.2:-46625326 MS.gene034893:CDS
GGGATGAACTTTGCCTACGG+TGG 0.663668 1.2:-46627283 MS.gene034893:CDS
AATGTCTAGAATTGTGAATG+TGG 0.664224 1.2:+46625456 None:intergenic
AAGTACACCTGTACCACCGT+AGG 0.676110 1.2:+46627270 None:intergenic
TGGCTTGAGGAAGACAACCA+AGG 0.680752 1.2:+46625593 None:intergenic
CCAGTTGGGAGATTCTCCGA+CGG 0.697686 1.2:-46627643 MS.gene034893:CDS
AGGATGATTGAGATGGCGAG+TGG 0.741996 1.2:+46627774 None:intergenic
GCTTGAGGAAGACAACCAAG+GGG 0.783209 1.2:+46625595 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTATAAATCAAGTAAT+TGG - chr1.2:46626629-46626648 MS.gene034893:intron 10.0%
!! ATAAATATAGTTATATACAA+AGG - chr1.2:46626194-46626213 MS.gene034893:intron 10.0%
!!! ACATTGATAATATATTATTA+AGG + chr1.2:46626149-46626168 None:intergenic 10.0%
!!! CATTGATAATATATTATTAA+GGG + chr1.2:46626148-46626167 None:intergenic 10.0%
!!! GTTTTTTAAATTTTTTGAAT+GGG - chr1.2:46625447-46625466 MS.gene034893:CDS 10.0%
!!! TGTTTTTTAAATTTTTTGAA+TGG - chr1.2:46625446-46625465 MS.gene034893:CDS 10.0%
!!! TTTTTTTTTGTTTTTGTAAA+TGG + chr1.2:46626057-46626076 None:intergenic 10.0%
!! AAATGACTACAATTATTATT+TGG - chr1.2:46625863-46625882 MS.gene034893:intron 15.0%
!! AAGTTAACACTAAATATATT+TGG - chr1.2:46626304-46626323 MS.gene034893:intron 15.0%
!! AGATTATAGAAATTTAAACA+AGG - chr1.2:46627662-46627681 MS.gene034893:CDS 15.0%
!! GTAAAGTAATCTTATAAAAA+AGG - chr1.2:46626921-46626940 MS.gene034893:intron 15.0%
!! TGAAACAAAAAATAACTTAA+AGG + chr1.2:46626408-46626427 None:intergenic 15.0%
!! TTGTAACTAAAAAAACTTAA+AGG - chr1.2:46626821-46626840 MS.gene034893:intron 15.0%
!!! AAGTTTTTTTAGTTACAAAT+TGG + chr1.2:46626819-46626838 None:intergenic 15.0%
!!! AGTTATTTTTTGTTTCAAAT+TGG - chr1.2:46626411-46626430 MS.gene034893:intron 15.0%
!!! ATCATATTTTCTATATTTCT+TGG - chr1.2:46625927-46625946 MS.gene034893:intron 15.0%
!! ACATAAATCCATAATTTAGA+AGG - chr1.2:46627184-46627203 MS.gene034893:CDS 20.0%
!! AGATTACTTTACAAAAATCA+CGG + chr1.2:46626913-46626932 None:intergenic 20.0%
!! AGTAATCTTATAAAAAAGGA+CGG - chr1.2:46626925-46626944 MS.gene034893:intron 20.0%
!! CATAAATCCATAATTTAGAA+GGG - chr1.2:46627185-46627204 MS.gene034893:CDS 20.0%
!! GTAAATATTATACGACTTAA+AGG + chr1.2:46626438-46626457 None:intergenic 20.0%
!! GTGATAAACATATAACTTAA+AGG + chr1.2:46626348-46626367 None:intergenic 20.0%
!! TAAAAACCATATTTGATTCA+TGG - chr1.2:46625289-46625308 MS.gene034893:CDS 20.0%
!! TACAATTATTATTTGGAAAC+AGG - chr1.2:46625870-46625889 MS.gene034893:intron 20.0%
!! TAGACTATTTAACATTAAGA+TGG - chr1.2:46626501-46626520 MS.gene034893:intron 20.0%
!! TCAAAAAAATTGTTTGTGTT+TGG - chr1.2:46625237-46625256 MS.gene034893:CDS 20.0%
!! TGATAACAAAAGAAACTTAA+AGG + chr1.2:46626379-46626398 None:intergenic 20.0%
!!! AACACAAACAATTTTTTTGA+AGG + chr1.2:46625237-46625256 None:intergenic 20.0%
!!! ATTCTTTCTATTTTACGTTT+TGG + chr1.2:46627137-46627156 None:intergenic 20.0%
!!! GCAAATATTTTATGACTTAA+AGG - chr1.2:46626792-46626811 MS.gene034893:intron 20.0%
!!! TGAATCAAATATGGTTTTTA+TGG + chr1.2:46625289-46625308 None:intergenic 20.0%
!!! TGTTTCTATTATCATATACT+TGG + chr1.2:46627160-46627179 None:intergenic 20.0%
! AACAAAGTTAGTTGAAAAGA+GGG + chr1.2:46626469-46626488 None:intergenic 25.0%
! AATTATTATTTGGAAACAGG+AGG - chr1.2:46625873-46625892 MS.gene034893:intron 25.0%
! AATTTCATTGAATAAACGCA+GGG - chr1.2:46627270-46627289 MS.gene034893:CDS 25.0%
! ACATATAACTTAAAGGATCA+TGG + chr1.2:46626341-46626360 None:intergenic 25.0%
! CTAATAGCATCATTATCAAT+TGG - chr1.2:46625413-46625432 MS.gene034893:CDS 25.0%
! CTATTTAACATTAAGATGGT+AGG - chr1.2:46626505-46626524 MS.gene034893:intron 25.0%
! GAGAAGATATATTACAAGTT+AGG - chr1.2:46627044-46627063 MS.gene034893:intron 25.0%
! GATTACTTTACAAAAATCAC+GGG + chr1.2:46626912-46626931 None:intergenic 25.0%
! GTTTGATGAAATTAGGATAA+TGG - chr1.2:46626768-46626787 MS.gene034893:intron 25.0%
! TAACAAAGTTAGTTGAAAAG+AGG + chr1.2:46626470-46626489 None:intergenic 25.0%
! TAATTTCATTGAATAAACGC+AGG - chr1.2:46627269-46627288 MS.gene034893:CDS 25.0%
! TACTTTCCATGAATCAAATA+TGG + chr1.2:46625298-46625317 None:intergenic 25.0%
! TGATTGAGTTTGATGAAATT+AGG - chr1.2:46626761-46626780 MS.gene034893:intron 25.0%
! TTAGAAACCCTTCTAAATTA+TGG + chr1.2:46627195-46627214 None:intergenic 25.0%
!! CTTGATTAAGGAATTGATTT+GGG + chr1.2:46625775-46625794 None:intergenic 25.0%
!! TTTGATGTCATAAGCATTTT+TGG + chr1.2:46626532-46626551 None:intergenic 25.0%
!!! ATTGATAATGATGCTATTAG+AGG + chr1.2:46625413-46625432 None:intergenic 25.0%
!!! TCAATCAAAAAGTGTTTATG+TGG + chr1.2:46626748-46626767 None:intergenic 25.0%
!!! TTGATAATGATGCTATTAGA+GGG + chr1.2:46625412-46625431 None:intergenic 25.0%
AAATGACTGCAGATGATATT+TGG - chr1.2:46626870-46626889 MS.gene034893:intron 30.0%
ATAACTTAAAGGATCATGGA+AGG + chr1.2:46626337-46626356 None:intergenic 30.0%
GCTTGATTAAGGAATTGATT+TGG + chr1.2:46625776-46625795 None:intergenic 30.0%
GTGGATGTTTAATGTTAAGT+TGG + chr1.2:46626729-46626748 None:intergenic 30.0%
TCACGGGTGTATAAATATAT+TGG + chr1.2:46626896-46626915 None:intergenic 30.0%
TGATTTCAATCCCAAATACT+TGG + chr1.2:46625628-46625647 None:intergenic 30.0%
TTCCATAAATTGTGAGTGAT+TGG + chr1.2:46625651-46625670 None:intergenic 30.0%
TTCTTGAATGAGCTTGATTA+AGG + chr1.2:46625787-46625806 None:intergenic 30.0%
TTGAAGATGAATCAAATTGG+TGG + chr1.2:46627334-46627353 None:intergenic 30.0%
TTGATTCATCTTCAAAGCTT+AGG - chr1.2:46627339-46627358 MS.gene034893:CDS 30.0%
! AATGTCTAGAATTGTGAATG+TGG + chr1.2:46627535-46627554 None:intergenic 30.0%
! ATCCAGAATCAAGTTTCTTT+TGG - chr1.2:46627709-46627728 MS.gene034893:CDS 30.0%
! CTAAGCATGATTTGAAGTAT+GGG - chr1.2:46625685-46625704 MS.gene034893:CDS 30.0%
! GTACTTGAAGTATCTTCTAT+TGG - chr1.2:46625735-46625754 MS.gene034893:intron 30.0%
! TAGACATTTTCGATAGTTTC+AGG - chr1.2:46627547-46627566 MS.gene034893:intron 30.0%
! TCCAGAATCAAGTTTCTTTT+GGG - chr1.2:46627710-46627729 MS.gene034893:CDS 30.0%
! TTGTAACAGATTGGTTCAAT+AGG + chr1.2:46627485-46627504 None:intergenic 30.0%
!! ACAGATTTGGTGATATCTAA+AGG + chr1.2:46625822-46625841 None:intergenic 30.0%
!! ACTATTGCAACTTTGAAATG+AGG + chr1.2:46627430-46627449 None:intergenic 30.0%
!! AGTTTTGACAGCAATGAATT+TGG - chr1.2:46626698-46626717 MS.gene034893:intron 30.0%
!! ATCACTGATTCAATGAAAGA+TGG + chr1.2:46627300-46627319 None:intergenic 30.0%
!! GCTTTGAAGATGAATCAAAT+TGG + chr1.2:46627337-46627356 None:intergenic 30.0%
!! TCACTGATTCAATGAAAGAT+GGG + chr1.2:46627299-46627318 None:intergenic 30.0%
!! TTTTTGAAGGATGATTGAGA+TGG + chr1.2:46625224-46625243 None:intergenic 30.0%
AACAGTGAATTCACATACCA+AGG + chr1.2:46625389-46625408 None:intergenic 35.0%
AAGTTAGTTGAAAAGAGGGA+TGG + chr1.2:46626465-46626484 None:intergenic 35.0%
AGAGACATAAGCTACAGATT+TGG + chr1.2:46625835-46625854 None:intergenic 35.0%
AGGATTTGAGAGAATTGTTG+TGG - chr1.2:46627359-46627378 MS.gene034893:CDS 35.0%
ATATTGTGCAGCCAAGTATT+TGG - chr1.2:46625614-46625633 MS.gene034893:CDS 35.0%
CACCAATCACTCACAATTTA+TGG - chr1.2:46625646-46625665 MS.gene034893:CDS 35.0%
CCATACTTCAAATCATGCTT+AGG + chr1.2:46625687-46625706 None:intergenic 35.0%
GAATGCTGTGTATAATGAGT+TGG - chr1.2:46627761-46627780 MS.gene034893:CDS 35.0%
GCATTACAATTAGAGACGAT+GGG + chr1.2:46626035-46626054 None:intergenic 35.0%
GGATTTGAGAGAATTGTTGT+GGG - chr1.2:46627360-46627379 MS.gene034893:CDS 35.0%
GGTTCAACTTTGTAACAGAT+TGG + chr1.2:46627494-46627513 None:intergenic 35.0%
GTAAGCAGTGAGTATAAATG+TGG - chr1.2:46627633-46627652 MS.gene034893:CDS 35.0%
TATTGTGCAGCCAAGTATTT+GGG - chr1.2:46625615-46625634 MS.gene034893:CDS 35.0%
TCAAACGTTCCTCAATGTTA+TGG + chr1.2:46627596-46627615 None:intergenic 35.0%
TCCCAAAAGAAACTTGATTC+TGG + chr1.2:46627714-46627733 None:intergenic 35.0%
TGTGAATGTGGTGTAATCAT+TGG + chr1.2:46627523-46627542 None:intergenic 35.0%
TTGGCTGCACAATATAAAAG+AGG + chr1.2:46625609-46625628 None:intergenic 35.0%
! ATTGGTTCAATAGGTTGTTG+TGG + chr1.2:46627476-46627495 None:intergenic 35.0%
! CCTAAGCATGATTTGAAGTA+TGG - chr1.2:46625684-46625703 MS.gene034893:CDS 35.0%
! GAGCTCATATGTGTGTTATT+TGG + chr1.2:46626677-46626696 None:intergenic 35.0%
! TATGGTTTTTATGGAGTTGC+CGG + chr1.2:46625280-46625299 None:intergenic 35.0%
!! AAAGGATCATGGAAGGTATT+TGG + chr1.2:46626330-46626349 None:intergenic 35.0%
!! GATTCATGGAAAGTACCTTA+TGG - chr1.2:46625303-46625322 MS.gene034893:CDS 35.0%
!! TGATTTGGGTTGTCACATTT+GGG + chr1.2:46625761-46625780 None:intergenic 35.0%
!! TGGTGTAATCATTGGTTTCT+TGG + chr1.2:46627515-46627534 None:intergenic 35.0%
!! TTGATTTGGGTTGTCACATT+TGG + chr1.2:46625762-46625781 None:intergenic 35.0%
!!! AGAGTTTTAACTGACTTCCT+TGG - chr1.2:46625369-46625388 MS.gene034893:CDS 35.0%
CCTCAATGTTATGGCTAGAA+GGG + chr1.2:46627587-46627606 None:intergenic 40.0%
GGAGATTCGTATGTTGATAC+CGG - chr1.2:46625258-46625277 MS.gene034893:CDS 40.0%
GGCATTACAATTAGAGACGA+TGG + chr1.2:46626036-46626055 None:intergenic 40.0%
TATGGGATGAACTTTGCCTA+CGG - chr1.2:46625702-46625721 MS.gene034893:intron 40.0%
TCCTCAATGTTATGGCTAGA+AGG + chr1.2:46627588-46627607 None:intergenic 40.0%
TTGAAATGAGGTTTCAGCAG+TGG + chr1.2:46627418-46627437 None:intergenic 40.0%
TTTGAGAGAATTGTTGTGGG+AGG - chr1.2:46627363-46627382 MS.gene034893:CDS 40.0%
CCCTTCTAGCCATAACATTG+AGG - chr1.2:46627584-46627603 MS.gene034893:intron 45.0%
GTAGCTTATGTCTCTGTTGC+TGG - chr1.2:46625840-46625859 MS.gene034893:intron 45.0%
GTCAGTTAAAACTCTGCCGT+CGG + chr1.2:46625364-46625383 None:intergenic 45.0%
!!! AATCTCCCAACTGGTTTTCC+GGG + chr1.2:46625339-46625358 None:intergenic 45.0%
!!! GAATCTCCCAACTGGTTTTC+CGG + chr1.2:46625340-46625359 None:intergenic 45.0%
!! ATTCATAAATATATAAAATA+TGG + chr1.2:46627235-46627254 None:intergenic 5.0%
!! TTCATAAATATATAAAATAT+GGG + chr1.2:46627234-46627253 None:intergenic 5.0%
!!! AAAAAAAAAACATTTTTTTA+AGG - chr1.2:46625524-46625543 MS.gene034893:CDS 5.0%
AACTTTGCCTACGGTGGTAC+AGG - chr1.2:46625711-46625730 MS.gene034893:intron 50.0%
AAGTACACCTGTACCACCGT+AGG + chr1.2:46625721-46625740 None:intergenic 50.0%
ACCTTTCCCGGAAAACCAGT+TGG - chr1.2:46625330-46625349 MS.gene034893:CDS 50.0%
AGGATGATTGAGATGGCGAG+TGG + chr1.2:46625217-46625236 None:intergenic 50.0%
CATTCCAACCAGCCTGTGTT+GGG + chr1.2:46627746-46627765 None:intergenic 50.0%
CCTTATGGCATGACCTTTCC+CGG - chr1.2:46625318-46625337 MS.gene034893:CDS 50.0%
CCTTTCCCGGAAAACCAGTT+GGG - chr1.2:46625331-46625350 MS.gene034893:CDS 50.0%
CTGCTTACTCCAACGCAACA+TGG + chr1.2:46627621-46627640 None:intergenic 50.0%
GCTTGAGGAAGACAACCAAG+GGG + chr1.2:46627396-46627415 None:intergenic 50.0%
GGCTTGAGGAAGACAACCAA+GGG + chr1.2:46627397-46627416 None:intergenic 50.0%
GGTTGTTGTGGAGAGCTACA+AGG + chr1.2:46627464-46627483 None:intergenic 50.0%
TGGCTTGAGGAAGACAACCA+AGG + chr1.2:46627398-46627417 None:intergenic 50.0%
! CGTTTGAAGCCATGTTGCGT+TGG - chr1.2:46627609-46627628 MS.gene034893:intron 50.0%
CCAGTTGGGAGATTCTCCGA+CGG - chr1.2:46625345-46625364 MS.gene034893:CDS 55.0%
CCGGGAAAGGTCATGCCATA+AGG + chr1.2:46625321-46625340 None:intergenic 55.0%
GAGGTTTCAGCAGTGGCTTG+AGG + chr1.2:46627411-46627430 None:intergenic 55.0%
GCATTCCAACCAGCCTGTGT+TGG + chr1.2:46627747-46627766 None:intergenic 55.0%
GGATCAGTTGCACCCAACAC+AGG - chr1.2:46627731-46627750 MS.gene034893:CDS 55.0%
GGGATGAACTTTGCCTACGG+TGG - chr1.2:46625705-46625724 MS.gene034893:intron 55.0%
GTGGGAGGTTTACAACCCCT+TGG - chr1.2:46627378-46627397 MS.gene034893:intron 55.0%
!!! CCCAACTGGTTTTCCGGGAA+AGG + chr1.2:46625334-46625353 None:intergenic 55.0%
CAGTTGCACCCAACACAGGC+TGG - chr1.2:46627735-46627754 MS.gene034893:CDS 60.0%
CCGTCGGAGAATCTCCCAAC+TGG + chr1.2:46625348-46625367 None:intergenic 60.0%
TGCACCCAACACAGGCTGGT+TGG - chr1.2:46627739-46627758 MS.gene034893:CDS 60.0%
!! GGAAACAGGAGGCGCTGTGT+CGG - chr1.2:46625884-46625903 MS.gene034893:intron 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 46625195 46627815 46625195 ID=MS.gene034893
chr1.2 mRNA 46625195 46627815 46625195 ID=MS.gene034893.t1;Parent=MS.gene034893
chr1.2 exon 46627620 46627815 46627620 ID=MS.gene034893.t1.exon1;Parent=MS.gene034893.t1
chr1.2 CDS 46627620 46627815 46627620 ID=cds.MS.gene034893.t1;Parent=MS.gene034893.t1
chr1.2 exon 46627105 46627385 46627105 ID=MS.gene034893.t1.exon2;Parent=MS.gene034893.t1
chr1.2 CDS 46627105 46627385 46627105 ID=cds.MS.gene034893.t1;Parent=MS.gene034893.t1
chr1.2 exon 46625195 46625719 46625195 ID=MS.gene034893.t1.exon3;Parent=MS.gene034893.t1
chr1.2 CDS 46625195 46625719 46625195 ID=cds.MS.gene034893.t1;Parent=MS.gene034893.t1
Gene Sequence

>MS.gene034893

ATGGGGCTGCAAGTTGAGGCCACTCGCCATCTCAATCATCCTTCAAAAAAATTGTTTGTGTTTGGAGATTCGTATGTTGATACCGGCAACTCCATAAAAACCATATTTGATTCATGGAAAGTACCTTATGGCATGACCTTTCCCGGAAAACCAGTTGGGAGATTCTCCGACGGCAGAGTTTTAACTGACTTCCTTGGTATGTGAATTCACTGTTCCCTCTAATAGCATCATTATCAATTGGAACAATGCATTGTTTTTTAAATTTTTTGAATGGGAGTAACTTACTTTTTTTAAGAAAATTTCGTATTGAAAAAACATGTACTAAATTTAAAAAAAAAACATTTTTTTAAGGATATAATGCATATTTTAGTCTTTCTTTATTAGTGTTTGCTTTCTCTTTTAATTATGCTTCCTCTTTTATATTGTGCAGCCAAGTATTTGGGATTGAAATCACCAATCACTCACAATTTATGGAATACTAATACAGTGCCTAAGCATGATTTGAAGTATGGGATGAACTTTGCCTACGGTGGTACAGGTGTACTTGAAGTATCTTCTATTGGCCCAAATGTGACAACCCAAATCAATTCCTTAATCAAGCTCATTCAAGAAAATGTCTACACTCCTTTAGATATCACCAAATCTGTAGCTTATGTCTCTGTTGCTGGAAATGACTACAATTATTATTTGGAAACAGGAGGCGCTGTGTCGGTAAATTATTTAAATTTAATCATCATATTTTCTATATTTCTTGGATGTAAAGTATGAAATTCAATAATTAAAAAGTGATGATGATGATAATAACAACAACTACAATAATAATAATTAAAATAGACTCCCATCGTCTCTAATTGTAATGCCATTTACAAAAACAAAAAAAAAAAATTGTCTCTAAATATAAGACATCTACAAATTTTTAGATGTATTTATTACTCTTTATTCAAGTATAACCCTTAATAATATATTATCAATGTATCTTGCAATATAAAAAGTTAACAAATAAATATAGTTATATACAAAGGACAATTTGATAATAGTTACATATATTTATTTTTTGACAAAAGTTACATATATTTACGACAAGTTTATTACTTCAACAAATTTATTAAAAGTTAACACTAAATATATTTGGCCAAATACCTTCCATGATCCTTTAAGTTATATGTTTATCACAAATTAATCCTTTAAGTTTCTTTTGTTATCAATTGATCCTTTAAGTTATTTTTTGTTTCAAATTGGTCCTTTAAGTCGTATAATATTTACATTGCCATCCCTCTTTTCAACTAACTTTGTTAAAAAGTGCTTATAGACTATTTAACATTAAGATGGTAGGTCCAAAAATGCTTATGACATCAAACATGATTACTTATACACATTTTCTTCTTCTTGTTTTTGAATTTCAAAACTAATTTTACTTATAAATATTTGATCAACAATATTATAAATCAAGTAATTGGTCAATTTTGTTTTGAATCAAGACCAAATAACACACATATGAGCTCTAGTTTTGACAGCAATGAATTTGGACAAACCAACTTAACATTAAACATCCACATAAACACTTTTTGATTGAGTTTGATGAAATTAGGATAATGGTGCAAATATTTTATGACTTAAAGGACCAATTTGTAACTAAAAAAACTTAAAGGACTAACTTGTTATAATCATGTAACTTAAATGACTGCAGATGATATTTGGCCAATATATTTATACACCCGTGATTTTTGTAAAGTAATCTTATAAAAAAGGACGGAGAGAGCAAATAATTTTTCAATTATTATTGCATAAAATTAGCACAGTATTTCAAAGTTATAAAGATAAAGCACTCATATGTAACAATTGTGATAGAGAGAAGATATATTACAAGTTAGGAAAAATGTATTTTTGAAAATTTAAAAAAAAAATTGCATTTTCAAAATTGTAGATCTAAAGATGAAAACCAAAACGTAAAATAGAAAGAATCCAAGTATATGATAATAGAAACAAAAAACATAAATCCATAATTTAGAAGGGTTTCTAAAAAAAATAAAATTGCACCCATATTTTATATATTTATGAATGAATGTTAACAAAATAATTTCATTGAATAAACGCAGGGTTTCCCATCTTTCATTGAATCAGTGATTGAACAAACAACCACCAATTTGATTCATCTTCAAAGCTTAGGATTTGAGAGAATTGTTGTGGGAGGTTTACAACCCCTTGGTTGTCTTCCTCAAGCCACTGCTGAAACCTCATTTCAAAGTTGCAATAGTACATTTAATGACCTTGTAGCTCTCCACAACAACCTATTGAACCAATCTGTTACAAAGTTGAACCAAGAAACCAATGATTACACCACATTCACAATTCTAGACATTTTCGATAGTTTCAGGTCAGTGTTGAATCACCCTTCTAGCCATAACATTGAGGAACGTTTGAAGCCATGTTGCGTTGGAGTAAGCAGTGAGTATAAATGTGGAAGTGTAGATTATAGAAATTTAAACAAGGTAAAGAAATATTTGATTTGTGAAAATCCAGAATCAAGTTTCTTTTGGGATCAGTTGCACCCAACACAGGCTGGTTGGAATGCTGTGTATAATGAGTTGGAGAAGAAAGATCTTTATCAAATTTTGTATTAG
Protein sequence

>MS.gene034893.t1

MGLQVEATRHLNHPSKKLFVFGDSYVDTGNSIKTIFDSWKVPYGMTFPGKPVGRFSDGRVLTDFLAKYLGLKSPITHNLWNTNTVPKHDLKYGMNFAYGGTGVLEVSSIGPNVTTQINSLIKLIQENVYTPLDITKSVAYVSVAGNDYNYYLETGGAVSGFPSFIESVIEQTTTNLIHLQSLGFERIVVGGLQPLGCLPQATAETSFQSCNSTFNDLVALHNNLLNQSVTKLNQETNDYTTFTILDIFDSFRSVLNHPSSHNIEERLKPCCVGVSSEYKCGSVDYRNLNKVKKYLICENPESSFFWDQLHPTQAGWNAVYNELEKKDLYQILY