AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99720.t1 MTR_5g074270 94.278 367 18 2 1 365 1 366 0.0 707
MS.gene99720.t1 MTR_5g074210 89.024 164 18 0 201 364 58 221 1.10e-107 315
MS.gene99720.t1 MTR_4g087985 46.131 336 168 4 9 337 17 346 2.34e-106 317
MS.gene99720.t1 MTR_2g015080 43.491 338 177 6 9 337 18 350 1.21e-97 295
MS.gene99720.t1 MTR_3g082830 43.598 328 182 3 29 355 34 359 6.02e-97 292
MS.gene99720.t1 MTR_1g025780 42.939 347 192 5 3 348 13 354 1.63e-93 284
MS.gene99720.t1 MTR_5g084790 41.088 331 192 3 26 355 25 353 1.75e-92 281
MS.gene99720.t1 MTR_3g114090 40.563 355 200 4 1 348 5 355 7.13e-92 280
MS.gene99720.t1 MTR_1g025760 40.116 344 203 3 1 343 48 389 1.40e-91 280
MS.gene99720.t1 MTR_5g084750 41.566 332 191 3 26 356 23 352 1.44e-91 278
MS.gene99720.t1 MTR_5g084770 41.049 324 189 2 33 355 28 350 5.46e-91 277
MS.gene99720.t1 MTR_1g025680 41.011 356 196 4 5 350 8 359 7.36e-90 278
MS.gene99720.t1 MTR_8g014910 43.218 317 176 4 29 343 28 342 1.31e-89 273
MS.gene99720.t1 MTR_3g464730 39.828 349 196 6 9 355 14 350 9.38e-89 271
MS.gene99720.t1 MTR_3g114120 43.385 325 178 3 31 355 45 363 1.42e-88 271
MS.gene99720.t1 MTR_1g025700 39.489 352 209 3 7 356 22 371 4.64e-88 270
MS.gene99720.t1 MTR_1g025720 41.640 317 183 2 25 341 29 343 5.60e-88 270
MS.gene99720.t1 MTR_5g083040 42.994 314 171 4 30 337 29 340 1.57e-87 268
MS.gene99720.t1 MTR_2g100620 43.492 315 174 4 29 341 27 339 2.07e-87 268
MS.gene99720.t1 MTR_8g075200 40.395 354 207 4 3 355 12 362 3.93e-85 264
MS.gene99720.t1 MTR_8g075220 40.947 359 203 6 3 355 11 366 7.81e-85 262
MS.gene99720.t1 MTR_8g075230 41.994 331 184 4 8 337 16 339 2.02e-84 260
MS.gene99720.t1 MTR_5g022630 39.181 342 202 4 1 337 8 348 2.25e-84 260
MS.gene99720.t1 MTR_5g022640 39.766 342 199 5 1 337 8 347 2.33e-83 258
MS.gene99720.t1 MTR_2g084585 40.994 322 187 3 23 343 20 339 3.82e-80 249
MS.gene99720.t1 MTR_4g056160 40.123 324 190 2 33 353 27 349 5.57e-80 249
MS.gene99720.t1 MTR_1g025910 41.196 301 172 4 38 337 41 337 3.49e-75 237
MS.gene99720.t1 MTR_4g056280 39.873 316 187 3 33 347 30 343 7.48e-74 233
MS.gene99720.t1 MTR_7g116520 34.412 340 216 5 11 347 12 347 1.88e-66 214
MS.gene99720.t1 MTR_6g021530 37.812 320 189 7 33 347 29 343 2.31e-66 214
MS.gene99720.t1 MTR_7g116500 33.913 345 216 7 5 345 8 344 3.54e-66 214
MS.gene99720.t1 MTR_7g116570 34.393 346 218 6 5 347 8 347 4.01e-65 211
MS.gene99720.t1 MTR_1g069175 34.557 327 207 5 25 347 25 348 1.99e-64 209
MS.gene99720.t1 MTR_1g079540 34.493 345 214 7 10 347 5 344 1.51e-62 204
MS.gene99720.t1 MTR_4g019880 35.016 317 195 7 33 343 32 343 7.79e-62 202
MS.gene99720.t1 MTR_1g024890 34.524 336 211 6 16 347 15 345 2.53e-60 199
MS.gene99720.t1 MTR_5g093090 33.333 336 211 5 13 341 8 337 6.29e-60 197
MS.gene99720.t1 MTR_7g116510 34.277 318 203 5 33 347 25 339 5.09e-59 195
MS.gene99720.t1 MTR_5g009100 34.375 320 195 7 35 347 48 359 5.35e-59 196
MS.gene99720.t1 MTR_2g033920 36.957 322 191 8 30 345 32 347 2.05e-58 194
MS.gene99720.t1 MTR_1g079530 32.749 342 217 7 9 347 5 336 3.07e-58 193
MS.gene99720.t1 MTR_3g052490 34.169 319 197 5 30 341 29 341 1.00e-57 192
MS.gene99720.t1 MTR_3g052480 34.985 323 190 7 30 341 30 343 1.94e-55 186
MS.gene99720.t1 MTR_4g122200 36.449 321 194 7 30 345 32 347 6.38e-55 184
MS.gene99720.t1 MTR_8g087890 35.647 317 190 10 35 345 33 341 1.66e-54 183
MS.gene99720.t1 MTR_8g079050 34.857 350 214 10 9 347 11 357 2.25e-54 183
MS.gene99720.t1 MTR_3g024510 33.528 343 215 9 10 345 12 348 2.64e-54 183
MS.gene99720.t1 MTR_4g035353 34.286 315 196 7 30 339 28 336 3.97e-54 182
MS.gene99720.t1 MTR_0565s0010 35.127 316 194 8 35 345 34 343 3.53e-53 180
MS.gene99720.t1 MTR_3g435540 33.131 329 207 7 35 359 25 344 3.55e-53 180
MS.gene99720.t1 MTR_2g033930 33.846 325 193 9 33 347 32 344 4.42e-53 179
MS.gene99720.t1 MTR_4g108690 31.818 330 212 7 35 360 29 349 7.73e-53 179
MS.gene99720.t1 MTR_3g098270 34.891 321 199 7 31 345 32 348 2.59e-52 178
MS.gene99720.t1 MTR_3g052580 31.875 320 206 6 30 343 25 338 2.20e-51 176
MS.gene99720.t1 MTR_8g022810 33.141 347 213 10 4 341 13 349 2.30e-51 176
MS.gene99720.t1 MTR_7g008060 29.942 344 221 7 7 347 7 333 2.39e-51 175
MS.gene99720.t1 MTR_3g052580 31.875 320 206 6 30 343 24 337 5.08e-51 175
MS.gene99720.t1 MTR_5g078210 30.395 329 221 6 19 345 12 334 7.68e-51 173
MS.gene99720.t1 MTR_2g044100 30.081 369 238 8 5 359 11 373 1.53e-49 171
MS.gene99720.t1 MTR_3g005650 31.210 314 204 8 30 340 27 331 1.18e-47 165
MS.gene99720.t1 MTR_8g074570 32.113 355 207 12 3 341 11 347 3.01e-46 162
MS.gene99720.t1 MTR_5g093090 33.910 289 178 5 13 294 8 290 8.76e-46 159
MS.gene99720.t1 MTR_8g022790 31.366 322 210 5 27 347 31 342 3.64e-45 159
MS.gene99720.t1 MTR_1108s0010 41.038 212 112 4 137 347 3 202 4.84e-45 154
MS.gene99720.t1 MTR_3g005660 31.056 322 212 8 30 345 33 350 3.71e-44 156
MS.gene99720.t1 MTR_5g093550 89.189 74 8 0 291 364 76 149 1.44e-43 148
MS.gene99720.t1 MTR_8g031430 31.677 322 201 8 33 347 37 346 2.99e-43 154
MS.gene99720.t1 MTR_2g017965 31.579 323 202 11 28 344 28 337 2.82e-42 151
MS.gene99720.t1 MTR_8g087870 30.240 334 213 10 28 357 24 341 3.44e-42 150
MS.gene99720.t1 MTR_0009s0250 32.344 337 204 13 19 348 19 338 4.19e-42 150
MS.gene99720.t1 MTR_8g031420 28.653 349 226 7 8 347 10 344 5.94e-42 150
MS.gene99720.t1 MTR_2g017925 33.022 321 189 13 28 341 28 329 1.49e-41 149
MS.gene99720.t1 MTR_8g031390 30.341 323 203 8 33 347 37 345 5.32e-41 148
MS.gene99720.t1 MTR_8g074560 28.235 340 230 7 7 337 5 339 2.48e-40 146
MS.gene99720.t1 MTR_2g461580 31.288 326 199 11 22 341 20 326 4.47e-40 145
MS.gene99720.t1 MTR_3g021460 30.488 328 199 12 22 341 20 326 5.23e-40 145
MS.gene99720.t1 MTR_3g023220 32.288 319 188 12 30 341 30 327 5.75e-40 145
MS.gene99720.t1 MTR_2g017875 29.338 317 206 8 29 340 30 333 1.31e-39 144
MS.gene99720.t1 MTR_2g033920 33.219 292 184 7 8 294 10 295 1.85e-39 142
MS.gene99720.t1 MTR_8g031400 29.179 329 214 8 24 345 28 344 2.32e-38 140
MS.gene99720.t1 MTR_8g074580 30.968 310 199 7 3 306 17 317 3.75e-38 141
MS.gene99720.t1 MTR_2g017955 30.938 320 199 12 28 340 28 332 3.80e-37 138
MS.gene99720.t1 MTR_5g078210 29.496 278 189 5 19 294 12 284 3.10e-36 134
MS.gene99720.t1 MTR_2g015630 30.395 329 198 12 38 344 36 355 5.06e-36 135
MS.gene99720.t1 MTR_8g022810 28.986 345 177 10 4 341 13 296 7.56e-36 133
MS.gene99720.t1 MTR_1g030275 30.704 355 208 15 33 361 39 381 4.26e-35 132
MS.gene99720.t1 MTR_2g017915 31.013 316 179 12 28 338 28 309 6.34e-35 131
MS.gene99720.t1 MTR_2g015580 30.973 339 205 11 29 347 43 372 5.42e-34 130
MS.gene99720.t1 MTR_7g116870 31.044 364 201 15 33 364 33 378 1.16e-33 129
MS.gene99720.t1 MTR_8g031390 31.047 277 174 7 33 306 37 299 2.40e-33 126
MS.gene99720.t1 MTR_7g111780 31.751 337 192 14 29 347 32 348 2.98e-33 127
MS.gene99720.t1 MTR_1g030268 29.014 355 214 14 33 361 40 382 1.15e-32 126
MS.gene99720.t1 MTR_2g015590 31.519 349 207 14 32 357 30 369 1.21e-32 125
MS.gene99720.t1 MTR_1g079590 36.364 198 121 4 13 207 11 206 2.76e-32 120
MS.gene99720.t1 MTR_4g036375 38.037 163 96 2 33 191 30 191 2.75e-31 117
MS.gene99720.t1 MTR_1g030230 27.792 385 228 16 8 361 11 376 5.00e-31 121
MS.gene99720.t1 MTR_7g033165 28.696 345 201 12 33 347 33 362 7.20e-31 121
MS.gene99720.t1 MTR_1g030340 28.877 374 213 15 3 343 14 367 1.33e-30 120
MS.gene99720.t1 MTR_8g028160 28.150 373 214 14 28 364 31 385 2.20e-30 120
MS.gene99720.t1 MTR_4g104240 27.794 349 220 11 15 344 21 356 2.51e-30 119
MS.gene99720.t1 MTR_7g104220 28.739 341 199 15 31 356 40 351 1.50e-29 117
MS.gene99720.t1 MTR_5g087690 26.176 340 224 9 15 345 34 355 1.67e-29 117
MS.gene99720.t1 MTR_5g093090 36.464 181 106 4 13 186 8 186 2.71e-29 112
MS.gene99720.t1 MTR_6g049230 49.180 122 60 2 209 329 74 194 1.27e-28 110
MS.gene99720.t1 MTR_7g087190 26.016 369 221 12 14 347 24 375 1.88e-28 114
MS.gene99720.t1 MTR_1g082390 27.968 379 203 14 8 347 12 359 7.59e-28 112
MS.gene99720.t1 MTR_7g113860 28.895 353 190 12 33 347 29 358 2.22e-27 111
MS.gene99720.t1 MTR_8g089805 27.557 352 198 13 33 347 40 371 1.10e-26 109
MS.gene99720.t1 MTR_1g092690 26.720 378 214 17 1 350 10 352 1.20e-26 109
MS.gene99720.t1 MTR_7g113860 28.460 383 202 15 8 347 11 364 1.34e-26 109
MS.gene99720.t1 MTR_7g033150 25.926 378 223 10 8 347 10 368 3.91e-26 108
MS.gene99720.t1 MTR_1g092760 30.841 321 175 16 34 337 40 330 4.89e-26 107
MS.gene99720.t1 MTR_1g092750 29.338 317 186 14 34 337 41 332 5.09e-26 107
MS.gene99720.t1 MTR_1g060490 28.655 342 203 15 21 350 27 339 5.57e-26 107
MS.gene99720.t1 MTR_1g030220 26.486 370 228 14 2 343 11 364 1.47e-25 106
MS.gene99720.t1 MTR_7g033155 26.519 362 208 10 30 347 35 382 7.12e-25 104
MS.gene99720.t1 MTR_4g036385 44.231 104 57 1 241 343 20 123 1.12e-24 98.2
MS.gene99720.t1 MTR_1g092740 29.114 316 187 13 34 337 39 329 2.40e-24 102
MS.gene99720.t1 MTR_6g007100 25.946 370 221 13 1 347 6 345 3.92e-24 102
MS.gene99720.t1 MTR_2g015650 28.909 339 204 14 31 345 29 354 9.52e-24 101
MS.gene99720.t1 MTR_1g030268 30.072 276 167 11 33 294 40 303 1.79e-23 99.8
MS.gene99720.t1 MTR_2g018015 33.036 224 139 8 29 246 32 250 2.07e-23 99.0
MS.gene99720.t1 MTR_1g030265 28.333 300 171 11 95 361 61 349 6.12e-23 98.6
MS.gene99720.t1 MTR_2g087292 29.861 288 135 9 19 303 19 242 8.22e-23 97.1
MS.gene99720.t1 MTR_6g007090 25.000 380 229 11 1 347 6 362 1.01e-22 98.6
MS.gene99720.t1 MTR_1g060500 28.614 332 200 16 34 350 41 350 1.16e-22 98.2
MS.gene99720.t1 MTR_2g015670 27.811 338 195 13 31 345 29 340 1.29e-22 97.8
MS.gene99720.t1 MTR_4g056220 44.444 117 64 1 232 347 64 180 2.19e-22 93.6
MS.gene99720.t1 MTR_6g007095 26.158 367 219 13 13 347 18 364 4.21e-22 98.2
MS.gene99720.t1 MTR_6g007095 26.804 291 184 11 72 347 404 680 9.78e-17 82.0
MS.gene99720.t1 MTR_8g038680 26.979 341 211 11 33 347 28 356 5.11e-22 96.3
MS.gene99720.t1 MTR_0127s0040 30.556 216 131 7 132 337 4 210 7.94e-21 90.5
MS.gene99720.t1 MTR_3g069780 26.970 330 216 13 33 345 30 351 1.59e-20 92.0
MS.gene99720.t1 MTR_2g015590 29.496 278 173 9 32 294 30 299 4.13e-20 90.5
MS.gene99720.t1 MTR_6g034400 35.537 121 78 0 88 208 5 125 4.28e-20 85.5
MS.gene99720.t1 MTR_3g448360 29.254 335 203 12 33 345 29 351 4.52e-20 90.9
MS.gene99720.t1 MTR_7g111780 28.958 259 160 9 103 347 1 249 6.87e-20 88.6
MS.gene99720.t1 MTR_7g033165 28.269 283 167 11 33 294 33 300 7.46e-20 89.4
MS.gene99720.t1 MTR_2g079090 26.300 327 202 12 37 345 34 339 2.21e-19 88.6
MS.gene99720.t1 MTR_3g438030 26.061 330 219 13 33 345 30 351 5.88e-19 87.4
MS.gene99720.t1 MTR_2g079080 25.994 327 203 12 37 345 34 339 1.63e-18 86.3
MS.gene99720.t1 MTR_6g049220 40.367 109 62 2 33 141 30 135 2.02e-18 82.0
MS.gene99720.t1 MTR_0029s0050 26.300 327 202 12 37 345 34 339 3.46e-18 85.1
MS.gene99720.t1 MTR_0029s0100 26.300 327 202 12 37 345 34 339 6.12e-18 84.3
MS.gene99720.t1 MTR_7g113860 27.682 289 157 9 97 347 16 290 1.44e-17 82.8
MS.gene99720.t1 MTR_8g089805 26.102 295 178 11 85 347 17 303 2.09e-17 82.4
MS.gene99720.t1 MTR_3g069520 27.003 337 205 16 33 345 30 349 2.41e-17 82.8
MS.gene99720.t1 MTR_2g017925 29.148 223 136 10 126 341 19 226 2.00e-16 79.0
MS.gene99720.t1 MTR_8g062580 34.188 117 74 3 231 346 65 179 1.00e-15 76.3
MS.gene99720.t1 MTR_8g012540 25.466 322 202 11 33 328 28 337 6.83e-13 69.3
MS.gene99720.t1 MTR_5g084880 30.088 113 78 1 182 294 1 112 8.00e-13 65.9
MS.gene99720.t1 MTR_1g079570 27.273 121 86 1 227 347 4 122 2.44e-12 64.3
MS.gene99720.t1 MTR_5g062890 53.846 52 24 0 33 84 28 79 3.77e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99720.t1 AT2G24560 51.603 343 160 2 10 351 16 353 1.97e-134 388
MS.gene99720.t1 AT2G30310 50.568 352 168 2 1 351 7 353 1.76e-132 383
MS.gene99720.t1 AT1G58430 48.424 349 179 1 4 351 6 354 3.34e-129 375
MS.gene99720.t1 AT2G30220 53.125 320 149 1 33 351 33 352 5.44e-129 374
MS.gene99720.t1 AT2G31540 47.458 354 185 1 4 356 6 359 3.84e-123 359
MS.gene99720.t1 AT1G06990 46.334 341 178 4 1 337 2 341 3.01e-117 344
MS.gene99720.t1 AT2G40250 46.646 328 168 3 31 353 34 359 1.45e-109 325
MS.gene99720.t1 AT2G24560 50.993 302 142 2 10 310 16 312 1.50e-109 323
MS.gene99720.t1 AT5G45960 46.605 324 166 4 21 339 35 356 4.20e-101 303
MS.gene99720.t1 AT4G26790 40.729 329 192 3 29 356 25 351 7.87e-95 287
MS.gene99720.t1 AT4G26790 40.729 329 192 3 29 356 25 351 7.87e-95 287
MS.gene99720.t1 AT1G20120 43.731 327 180 4 29 353 74 398 2.35e-94 287
MS.gene99720.t1 AT2G42990 39.130 345 200 4 3 346 5 340 2.51e-93 283
MS.gene99720.t1 AT1G75890 42.991 321 180 3 33 351 47 366 1.58e-90 276
MS.gene99720.t1 AT1G75890 42.991 321 180 3 33 351 76 395 2.35e-90 277
MS.gene99720.t1 AT1G75900 41.983 343 191 5 8 347 18 355 2.59e-90 276
MS.gene99720.t1 AT2G04570 39.645 338 201 3 19 355 14 349 2.85e-90 275
MS.gene99720.t1 AT3G16370 44.051 311 170 4 33 341 30 338 7.53e-87 266
MS.gene99720.t1 AT1G75890 41.317 334 180 4 33 351 47 379 9.98e-87 267
MS.gene99720.t1 AT1G75880 40.230 348 205 3 9 355 28 373 2.42e-86 266
MS.gene99720.t1 AT5G03810 40.673 327 192 2 28 353 25 350 7.55e-86 264
MS.gene99720.t1 AT1G75880 40.115 349 205 4 9 355 28 374 1.42e-84 261
MS.gene99720.t1 AT3G14820 39.722 360 204 7 2 360 3 350 1.53e-84 260
MS.gene99720.t1 AT5G03820 38.983 354 203 5 7 353 7 354 7.92e-83 256
MS.gene99720.t1 AT5G45950 41.121 321 182 5 25 345 32 345 9.94e-83 256
MS.gene99720.t1 AT5G03820 38.983 354 203 5 7 353 35 382 2.39e-82 256
MS.gene99720.t1 AT5G42170 39.339 333 194 5 14 343 29 356 4.48e-82 254
MS.gene99720.t1 AT1G20132 40.764 314 183 3 33 345 61 372 2.61e-81 253
MS.gene99720.t1 AT5G63170 40.361 332 174 6 8 337 10 319 3.82e-80 249
MS.gene99720.t1 AT3G53100 40.895 313 182 3 33 344 29 339 1.72e-79 248
MS.gene99720.t1 AT1G20135 39.748 317 170 7 31 343 27 326 5.75e-78 243
MS.gene99720.t1 AT5G22810 39.252 321 189 4 25 341 26 344 5.19e-77 241
MS.gene99720.t1 AT2G31550 48.387 217 111 1 141 356 2 218 1.74e-76 235
MS.gene99720.t1 AT1G59406 37.685 337 204 5 8 343 5 336 2.61e-76 239
MS.gene99720.t1 AT1G59030 37.685 337 204 5 8 343 5 336 2.61e-76 239
MS.gene99720.t1 AT1G58725 37.685 337 204 5 8 343 5 336 2.61e-76 239
MS.gene99720.t1 AT1G20130 37.237 333 193 4 31 352 182 509 9.00e-74 238
MS.gene99720.t1 AT1G20130 37.538 333 192 4 31 352 202 529 1.40e-73 238
MS.gene99720.t1 AT1G73610 38.793 348 191 9 1 347 9 335 4.54e-73 231
MS.gene99720.t1 AT1G58520 36.792 318 188 5 27 343 24 329 1.29e-70 224
MS.gene99720.t1 AT1G58525 36.792 318 188 5 27 343 24 329 1.29e-70 224
MS.gene99720.t1 AT1G23500 40.187 321 171 7 31 347 33 336 1.08e-68 219
MS.gene99720.t1 AT3G43570 33.728 338 189 6 8 344 5 308 2.72e-67 215
MS.gene99720.t1 AT5G33370 36.364 319 194 6 33 347 30 343 1.09e-65 213
MS.gene99720.t1 AT1G75920 37.812 320 176 8 33 345 29 332 6.49e-64 207
MS.gene99720.t1 AT3G04290 34.251 327 206 6 25 347 21 342 7.26e-62 202
MS.gene99720.t1 AT4G28780 33.754 317 205 5 33 347 31 344 1.51e-61 202
MS.gene99720.t1 AT1G75930 37.283 346 195 10 10 351 11 338 1.05e-60 199
MS.gene99720.t1 AT1G75920 36.119 335 176 9 33 345 24 342 6.42e-60 197
MS.gene99720.t1 AT4G10950 33.654 312 202 5 31 340 69 377 1.91e-59 197
MS.gene99720.t1 AT1G75910 35.455 330 183 7 33 351 28 338 1.18e-58 193
MS.gene99720.t1 AT5G08460 34.195 348 212 9 5 344 25 363 1.81e-58 194
MS.gene99720.t1 AT5G18430 33.333 318 207 4 33 347 28 343 6.13e-58 192
MS.gene99720.t1 AT4G10950 32.692 312 201 5 31 340 69 373 2.75e-57 192
MS.gene99720.t1 AT3G50400 34.278 353 217 11 2 344 5 352 3.72e-56 188
MS.gene99720.t1 AT1G29660 34.969 326 200 8 25 345 24 342 7.69e-56 187
MS.gene99720.t1 AT3G43550 36.742 264 162 3 31 294 28 286 2.44e-55 183
MS.gene99720.t1 AT2G23540 34.270 356 214 10 5 347 20 368 3.48e-55 186
MS.gene99720.t1 AT1G29670 33.236 343 213 9 8 345 10 341 3.44e-53 180
MS.gene99720.t1 AT1G53920 33.333 345 209 11 7 339 18 353 3.98e-53 180
MS.gene99720.t1 AT1G71250 30.841 321 215 6 28 345 36 352 4.15e-53 180
MS.gene99720.t1 AT5G41890 34.132 334 189 9 35 347 33 356 6.36e-53 179
MS.gene99720.t1 AT1G75920 35.235 298 171 7 55 345 22 304 8.61e-53 177
MS.gene99720.t1 AT5G45670 33.236 343 213 9 8 345 9 340 2.44e-52 177
MS.gene99720.t1 AT1G29670 33.236 343 213 9 8 345 78 409 2.45e-52 179
MS.gene99720.t1 AT5G15720 33.962 318 199 7 33 344 30 342 8.39e-52 176
MS.gene99720.t1 AT4G18970 33.758 314 197 8 35 343 30 337 1.85e-50 172
MS.gene99720.t1 AT1G74460 32.424 330 208 9 35 359 25 344 2.11e-50 172
MS.gene99720.t1 AT4G18970 33.758 314 197 8 35 343 30 337 5.82e-50 172
MS.gene99720.t1 AT5G33370 36.842 266 159 6 33 294 30 290 7.10e-50 170
MS.gene99720.t1 AT1G75920 34.062 320 157 9 33 345 29 301 1.46e-49 169
MS.gene99720.t1 AT5G37690 27.714 350 237 7 1 347 2 338 5.03e-49 169
MS.gene99720.t1 AT5G55050 35.061 328 192 10 30 343 33 353 7.77e-48 166
MS.gene99720.t1 AT1G33811 33.131 329 202 11 28 345 29 350 1.47e-47 165
MS.gene99720.t1 AT2G19060 32.915 319 187 11 35 345 32 331 7.29e-46 160
MS.gene99720.t1 AT5G37690 27.635 351 228 8 1 347 2 330 1.03e-45 160
MS.gene99720.t1 AT5G40990 30.618 356 226 7 4 347 8 354 1.29e-45 160
MS.gene99720.t1 AT1G71691 33.542 319 199 10 31 345 53 362 4.46e-45 159
MS.gene99720.t1 AT2G19010 34.796 319 179 12 35 345 32 329 5.01e-43 153
MS.gene99720.t1 AT3G14225 29.565 345 224 8 15 347 21 358 5.22e-43 153
MS.gene99720.t1 AT2G19010 34.796 319 179 12 35 345 62 359 6.44e-43 153
MS.gene99720.t1 AT3G14225 29.912 341 224 8 15 347 21 354 1.29e-42 152
MS.gene99720.t1 AT1G53990 31.356 354 217 10 5 347 7 345 1.57e-42 152
MS.gene99720.t1 AT2G19050 31.902 326 195 11 27 345 25 330 5.58e-42 150
MS.gene99720.t1 AT1G71120 29.573 328 209 9 26 345 24 337 5.79e-40 145
MS.gene99720.t1 AT1G53940 31.507 365 210 12 7 347 8 356 8.30e-39 142
MS.gene99720.t1 AT1G28580 31.856 361 211 16 9 347 16 363 8.02e-37 137
MS.gene99720.t1 AT1G28650 30.548 383 225 16 5 357 12 383 1.37e-36 136
MS.gene99720.t1 AT4G16230 36.323 223 134 5 30 248 27 245 1.91e-36 133
MS.gene99720.t1 AT5G15720 32.836 268 169 7 33 294 30 292 2.08e-35 132
MS.gene99720.t1 AT1G28610 31.765 340 191 15 31 344 29 353 9.95e-35 131
MS.gene99720.t1 AT4G30140 32.381 315 190 12 35 345 35 330 1.10e-34 130
MS.gene99720.t1 AT1G28640 29.006 362 224 15 7 347 12 361 2.95e-34 130
MS.gene99720.t1 AT1G28670 29.558 362 223 14 7 347 12 362 7.83e-33 126
MS.gene99720.t1 AT2G03980 30.499 341 207 16 16 340 21 347 9.45e-33 125
MS.gene99720.t1 AT2G03980 30.499 341 207 16 16 340 21 347 9.45e-33 125
MS.gene99720.t1 AT2G03980 30.499 341 207 16 16 340 21 347 9.45e-33 125
MS.gene99720.t1 AT2G03980 30.499 341 207 16 16 340 21 347 9.45e-33 125
MS.gene99720.t1 AT5G15720 29.804 255 172 4 95 343 57 310 2.79e-32 124
MS.gene99720.t1 AT3G48460 29.167 360 222 15 1 341 9 354 2.97e-32 125
MS.gene99720.t1 AT1G28600 30.286 350 213 13 33 361 31 370 3.10e-32 125
MS.gene99720.t1 AT1G28660 28.219 365 223 14 7 347 12 361 2.01e-31 122
MS.gene99720.t1 AT2G27360 29.641 334 206 12 33 345 33 358 4.78e-31 122
MS.gene99720.t1 AT1G31550 30.422 332 202 14 33 344 36 358 5.51e-31 121
MS.gene99720.t1 AT1G71691 33.209 268 166 10 31 294 53 311 6.36e-31 119
MS.gene99720.t1 AT1G28570 30.110 362 219 15 7 347 12 360 6.84e-31 121
MS.gene99720.t1 AT4G01130 29.296 355 197 12 28 347 29 364 2.00e-30 120
MS.gene99720.t1 AT3G26430 29.839 372 208 14 9 347 11 362 4.05e-30 119
MS.gene99720.t1 AT1G28660 28.219 365 222 15 7 347 12 360 4.86e-30 119
MS.gene99720.t1 AT2G19050 31.395 258 160 8 27 280 25 269 7.16e-30 116
MS.gene99720.t1 AT1G09390 28.760 379 230 16 1 361 12 368 8.69e-30 118
MS.gene99720.t1 AT1G56670 29.462 353 204 14 34 362 41 372 1.30e-29 117
MS.gene99720.t1 AT3G14220 27.778 324 196 12 34 344 33 331 1.83e-29 117
MS.gene99720.t1 AT5G03610 28.076 317 197 10 32 337 42 338 1.90e-29 117
MS.gene99720.t1 AT1G71691 30.488 246 163 6 104 345 20 261 6.77e-29 113
MS.gene99720.t1 AT3G05180 27.374 358 223 11 15 347 20 365 7.47e-29 115
MS.gene99720.t1 AT1G28590 29.830 352 209 16 19 345 22 360 1.40e-28 115
MS.gene99720.t1 AT5G45910 29.428 367 218 17 8 344 3 358 1.58e-28 114
MS.gene99720.t1 AT1G53940 32.166 314 175 12 8 303 9 302 2.33e-28 112
MS.gene99720.t1 AT5G14450 28.342 374 219 14 1 343 11 366 2.42e-28 114
MS.gene99720.t1 AT1G54790 27.907 344 211 12 30 347 29 361 3.78e-28 114
MS.gene99720.t1 AT3G09930 27.103 321 204 11 28 337 34 335 1.75e-27 111
MS.gene99720.t1 AT3G09930 27.103 321 204 11 28 337 34 335 1.75e-27 111
MS.gene99720.t1 AT1G31550 29.305 331 204 14 33 344 36 355 7.35e-27 110
MS.gene99720.t1 AT2G04020 35.849 212 117 10 33 237 43 242 8.53e-27 107
MS.gene99720.t1 AT2G04020 34.434 212 121 9 33 237 43 243 3.00e-26 107
MS.gene99720.t1 AT1G54010 28.797 316 189 12 34 337 37 328 4.45e-26 108
MS.gene99720.t1 AT1G54000 28.254 315 194 11 33 337 36 328 8.32e-26 107
MS.gene99720.t1 AT1G54020 26.019 319 209 8 34 347 34 330 3.38e-25 105
MS.gene99720.t1 AT3G62280 27.778 342 190 14 34 347 37 349 5.64e-25 104
MS.gene99720.t1 AT1G54790 26.344 372 222 15 7 347 10 360 1.51e-23 100
MS.gene99720.t1 AT4G01130 30.000 250 145 7 119 347 38 278 3.10e-23 98.6
MS.gene99720.t1 AT1G54030 25.723 311 203 9 33 340 52 337 1.29e-22 98.6
MS.gene99720.t1 AT1G67830 26.989 352 202 13 28 343 25 357 9.31e-22 95.5
MS.gene99720.t1 AT3G27950 25.816 337 214 11 33 347 32 354 1.77e-21 94.7
MS.gene99720.t1 AT5G03600 27.879 330 205 12 16 337 32 336 4.41e-21 93.6
MS.gene99720.t1 AT3G14210 28.972 321 186 14 33 337 36 330 7.08e-21 93.6
MS.gene99720.t1 AT1G28580 29.225 284 172 13 84 347 8 282 7.82e-21 92.0
MS.gene99720.t1 AT5G03600 27.576 330 206 12 22 343 3 307 1.98e-20 91.3
MS.gene99720.t1 AT4G01130 29.066 289 164 10 28 294 29 298 8.36e-20 89.7
MS.gene99720.t1 AT1G54790 25.564 399 217 18 7 347 10 386 8.88e-19 87.4
MS.gene99720.t1 AT1G56670 29.856 278 157 10 34 294 41 297 1.05e-18 85.9
MS.gene99720.t1 AT2G36325 26.100 341 211 16 30 357 44 356 7.55e-18 84.3
MS.gene99720.t1 AT4G16220 45.349 86 44 2 35 120 32 114 5.99e-15 74.3
MS.gene99720.t1 AT3G62280 28.148 270 142 12 34 280 37 277 8.54e-15 74.7
MS.gene99720.t1 AT1G54030 26.446 242 152 7 33 271 52 270 1.00e-14 74.7
MS.gene99720.t1 AT5G03980 23.404 235 164 6 134 359 95 322 2.36e-14 73.6
MS.gene99720.t1 AT1G28610 34.756 164 83 9 31 180 29 182 1.86e-13 70.1
MS.gene99720.t1 AT4G16233 35.849 106 65 2 242 345 5 109 8.87e-13 65.5
MS.gene99720.t1 AT1G28570 26.087 207 132 7 156 347 88 288 4.37e-12 66.6

Find 62 sgRNAs with CRISPR-Local

Find 161 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGCTTCAAAATATGTATTT+TGG 0.097246 5.2:-62125020 MS.gene99720:CDS
ATTTACAATTCCTGTGAAAT+TGG 0.160122 5.2:+62124923 None:intergenic
AGAAACCATCCCTCCTTTCT+TGG 0.234328 5.2:-62127650 MS.gene99720:CDS
AAGGGAAATCATTTACCTTA+TGG 0.241919 5.2:-62127760 MS.gene99720:CDS
CAATTACAAGCAATTATTTC+AGG 0.267672 5.2:-62126479 MS.gene99720:CDS
TAGATTCTCTAATGGAAAAT+TGG 0.269668 5.2:-62127707 MS.gene99720:CDS
GTGGCTGGGCTTCCTCCTAT+TGG 0.306172 5.2:-62126614 MS.gene99720:CDS
GTTATTTATACAAACATATA+TGG 0.324228 5.2:-62126449 MS.gene99720:CDS
AGCTTTGCATCTGGAGGATC+TGG 0.329846 5.2:-62127589 MS.gene99720:CDS
TTTCAAAGATTATGTGGATA+AGG 0.351799 5.2:-62127506 MS.gene99720:CDS
GTATTTAGTAATATACTTGT+TGG 0.359467 5.2:+62124972 None:intergenic
TTTATGACATTCCAACTAGA+AGG 0.365042 5.2:-62127390 MS.gene99720:CDS
GTCTACTTTGAACAAAATCT+TGG 0.366064 5.2:+62127344 None:intergenic
AACTTGGCTGTTATTTGAAT+AGG 0.376319 5.2:+62126584 None:intergenic
TGCAGAAAATTTGCTGTGGC+TGG 0.377082 5.2:-62126629 MS.gene99720:CDS
AACGTGCATTAAAATGATAA+AGG 0.377938 5.2:+62127909 None:intergenic
GATAAGGTTAAAAGCATTGT+AGG 0.384357 5.2:-62127490 MS.gene99720:CDS
AACATATATGGCCCCTTGAT+TGG 0.385325 5.2:-62126437 MS.gene99720:CDS
GGAAGAGAATTTAGAGGCTA+AGG 0.403545 5.2:-62126534 MS.gene99720:CDS
TATTACTAAATACATAGAAT+TGG 0.404026 5.2:-62124962 MS.gene99720:CDS
AAGGAGGGATGGTTTCTTTG+AGG 0.411318 5.2:+62127656 None:intergenic
ACAAAGAGTTGGAAATGCTT+TGG 0.414001 5.2:-62127452 MS.gene99720:CDS
TGAATATTTCAAAGATTATG+TGG 0.419935 5.2:-62127512 MS.gene99720:CDS
AACAAAGGATGTTGTGGAAC+TGG 0.421733 5.2:-62125093 MS.gene99720:CDS
CTACCAGTAGGTACATGATT+AGG 0.426812 5.2:+62127727 None:intergenic
AGGTTGGAGTTCAACATTAG+TGG 0.428216 5.2:-62127370 MS.gene99720:CDS
TACTTGTTGGTTGCTTCACT+TGG 0.432363 5.2:+62124985 None:intergenic
TGTGAAGGAAGAGAATTTAG+AGG 0.433278 5.2:-62126540 MS.gene99720:CDS
TCAAATGAAGAGCTTCTAAC+TGG 0.435781 5.2:-62127616 MS.gene99720:CDS
ACTGGTGTTAGCTTTGCATC+TGG 0.440820 5.2:-62127598 MS.gene99720:CDS
TTGAACTCCAACCTTCTAGT+TGG 0.447228 5.2:+62127379 None:intergenic
ACGTGCATTAAAATGATAAA+GGG 0.453829 5.2:+62127910 None:intergenic
CCTACTGGTAGATTCTCTAA+TGG 0.455682 5.2:-62127715 MS.gene99720:CDS
ATTCCTGTGAAATTGGAACT+TGG 0.457316 5.2:+62124930 None:intergenic
TGAATAGGTATGCAACCAAT+AGG 0.467106 5.2:+62126599 None:intergenic
TACCCAAGTTCCAATTTCAC+AGG 0.488485 5.2:-62124933 MS.gene99720:CDS
TTTCCTAATCATGTACCTAC+TGG 0.490307 5.2:-62127730 MS.gene99720:CDS
GCAGAAAATTTGCTGTGGCT+GGG 0.490709 5.2:-62126628 MS.gene99720:CDS
TTTGAAGCGTCATCACATAC+AGG 0.490836 5.2:+62125033 None:intergenic
GTGTTTGATAAGGCCAATCA+AGG 0.492502 5.2:+62126424 None:intergenic
TTAGGAAAATCTCTTCCATA+AGG 0.492601 5.2:+62127745 None:intergenic
TGACATTCCAACTAGAAGGT+TGG 0.501212 5.2:-62127386 MS.gene99720:CDS
AAAGAAGCTAAACAAAGAGT+TGG 0.506664 5.2:-62127463 MS.gene99720:CDS
ATAAGGTTAAAAGCATTGTA+GGG 0.513100 5.2:-62127489 MS.gene99720:CDS
TTCCTGTGAAATTGGAACTT+GGG 0.516173 5.2:+62124931 None:intergenic
GTCATTGCTTGAAGCAACAT+TGG 0.522506 5.2:+62127876 None:intergenic
GAAACAAACAAAGGATGTTG+TGG 0.546639 5.2:-62125099 MS.gene99720:CDS
GCTTTGGTGATCATTAGTGC+TGG 0.556144 5.2:-62127436 MS.gene99720:CDS
TGTTTGATAAGGCCAATCAA+GGG 0.561875 5.2:+62126425 None:intergenic
CCATTAGAGAATCTACCAGT+AGG 0.562970 5.2:+62127715 None:intergenic
TTGATCCAAGAAAGGAGGGA+TGG 0.570649 5.2:+62127645 None:intergenic
TTGTAGGAACTGTACGAGCT+CGG 0.576828 5.2:-62126653 MS.gene99720:intron
GGTGTTAGCTTTGCATCTGG+AGG 0.607335 5.2:-62127595 MS.gene99720:CDS
AGATCGTAATAAATGTGTGA+AGG 0.609827 5.2:-62126555 MS.gene99720:CDS
GGGGATTCTACAGTTGACAC+AGG 0.624344 5.2:-62127814 MS.gene99720:CDS
GCTTGAAGCAACATTGGCAA+TGG 0.626046 5.2:+62127882 None:intergenic
ATAGGTATGCAACCAATAGG+AGG 0.633460 5.2:+62126602 None:intergenic
TAAGGTTAAAAGCATTGTAG+GGG 0.636849 5.2:-62127488 MS.gene99720:CDS
GTTTGATAAGGCCAATCAAG+GGG 0.647325 5.2:+62126426 None:intergenic
CGGATGCAGAAAATTTGCTG+TGG 0.662430 5.2:-62126633 MS.gene99720:CDS
GGTTTCAAGGAAACAAACAA+AGG 0.717933 5.2:-62125108 MS.gene99720:CDS
GGTGTGAGTTCATTACACAA+TGG 0.719328 5.2:+62125054 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATCAATTATAAAAAAAAAT+GGG - chr5.2:62126049-62126068 MS.gene99720:intron 10.0%
!! TAAATTTCTTAAAAAATTGT+AGG - chr5.2:62126168-62126187 MS.gene99720:intron 10.0%
!! TCATCAATTATAAAAAAAAA+TGG - chr5.2:62126048-62126067 MS.gene99720:intron 10.0%
!!! ATTAGAATTATTTTCTTTTT+TGG - chr5.2:62125542-62125561 MS.gene99720:intron 10.0%
!! AAAAAAAAAATATTCAAGCT+TGG + chr5.2:62127071-62127090 None:intergenic 15.0%
!! ATCAAAAAAACATTGATAAA+GGG - chr5.2:62125059-62125078 MS.gene99720:CDS 15.0%
!! GTTATTTATACAAACATATA+TGG - chr5.2:62126388-62126407 MS.gene99720:intron 15.0%
!! TAAAATATGATTATCTATTG+TGG - chr5.2:62127008-62127027 MS.gene99720:intron 15.0%
!! TATTACTAAATACATAGAAT+TGG - chr5.2:62127875-62127894 MS.gene99720:CDS 15.0%
!!! AATACATTTTTTTATTCTGA+CGG - chr5.2:62126009-62126028 MS.gene99720:intron 15.0%
!!! TCTATTTTTTTTCAAAAACA+AGG + chr5.2:62127420-62127439 None:intergenic 15.0%
!!! TGGACTTTATATTTATTTTT+TGG + chr5.2:62127051-62127070 None:intergenic 15.0%
!!! TTTTATACAAATCTTCTTTT+TGG - chr5.2:62125751-62125770 MS.gene99720:intron 15.0%
!!! TTTTTTTTTTGACAAGTAAT+GGG - chr5.2:62126766-62126785 MS.gene99720:intron 15.0%
!!! TTTTTTTTTTTGACAAGTAA+TGG - chr5.2:62126765-62126784 MS.gene99720:intron 15.0%
!! AAGGAATAATCAAATGAAAA+AGG - chr5.2:62127204-62127223 MS.gene99720:intron 20.0%
!! AAGTCACAAGAATATTATAA+AGG + chr5.2:62127699-62127718 None:intergenic 20.0%
!! CAACAGAGATAAAATTTAAT+GGG - chr5.2:62126734-62126753 MS.gene99720:intron 20.0%
!! CAATCATATATATTTCATCA+AGG - chr5.2:62125892-62125911 MS.gene99720:intron 20.0%
!! CATCAAAAAAACATTGATAA+AGG - chr5.2:62125058-62125077 MS.gene99720:CDS 20.0%
!! GTATTTAGTAATATACTTGT+TGG + chr5.2:62127868-62127887 None:intergenic 20.0%
!! TAACAGAAAAAATGAAGTTA+AGG - chr5.2:62127146-62127165 MS.gene99720:intron 20.0%
!! TGAATATTTCAAAGATTATG+TGG - chr5.2:62125325-62125344 MS.gene99720:intron 20.0%
!! TTGACAAATTGAACATAAAA+GGG + chr5.2:62126488-62126507 None:intergenic 20.0%
!! TTTGACAAATTGAACATAAA+AGG + chr5.2:62126489-62126508 None:intergenic 20.0%
!!! AAAATAATCTGAAACAAATG+GGG - chr5.2:62127584-62127603 MS.gene99720:CDS 20.0%
!!! ATTTTTTTTCAAAAACAAGG+AGG + chr5.2:62127417-62127436 None:intergenic 20.0%
!!! GAAAATAATCTGAAACAAAT+GGG - chr5.2:62127583-62127602 MS.gene99720:CDS 20.0%
!!! TAAGTAACTTTTTTCTAATG+TGG - chr5.2:62126548-62126567 MS.gene99720:CDS 20.0%
!!! TAGACTTCAAATTTTCATTA+AGG - chr5.2:62125511-62125530 MS.gene99720:intron 20.0%
!!! TCATTTTTAAGTGTTTGTTT+AGG + chr5.2:62127524-62127543 None:intergenic 20.0%
!!! TGAAAATAATCTGAAACAAA+TGG - chr5.2:62127582-62127601 MS.gene99720:CDS 20.0%
!!! TTTTCATTACCAAGAAATAT+AGG + chr5.2:62127610-62127629 None:intergenic 20.0%
! AAAAAATGAAGTTAAGGCTT+TGG - chr5.2:62127152-62127171 MS.gene99720:intron 25.0%
! AACGTGCATTAAAATGATAA+AGG + chr5.2:62124931-62124950 None:intergenic 25.0%
! ACAAATGCATAAAATATGCA+AGG + chr5.2:62125827-62125846 None:intergenic 25.0%
! ACGTGCATTAAAATGATAAA+GGG + chr5.2:62124930-62124949 None:intergenic 25.0%
! ATCTATCTTAGAAATAGAGA+TGG + chr5.2:62126602-62126621 None:intergenic 25.0%
! ATTTACAATTCCTGTGAAAT+TGG + chr5.2:62127917-62127936 None:intergenic 25.0%
! CAATTACAAGCAATTATTTC+AGG - chr5.2:62126358-62126377 MS.gene99720:intron 25.0%
! CCAACAGAGATAAAATTTAA+TGG - chr5.2:62126733-62126752 MS.gene99720:intron 25.0%
! TAAGGATTACAACCAAAAAT+TGG - chr5.2:62126321-62126340 MS.gene99720:intron 25.0%
! TACTATCAGACACTAAATAT+AGG + chr5.2:62126986-62127005 None:intergenic 25.0%
! TAGATTCTCTAATGGAAAAT+TGG - chr5.2:62125130-62125149 MS.gene99720:intron 25.0%
! TCTTGACATTGAATTGATAA+TGG - chr5.2:62126689-62126708 MS.gene99720:intron 25.0%
! TTTCAAAGATTATGTGGATA+AGG - chr5.2:62125331-62125350 MS.gene99720:intron 25.0%
!! ACGCTTCAAAATATGTATTT+TGG - chr5.2:62127817-62127836 MS.gene99720:CDS 25.0%
!! ATTACGATCTTTTACAAACT+TGG + chr5.2:62126272-62126291 None:intergenic 25.0%
!! CCATTAAATTTTATCTCTGT+TGG + chr5.2:62126736-62126755 None:intergenic 25.0%
!! CCTAATAGCTTTTCATTTTA+GGG - chr5.2:62127457-62127476 MS.gene99720:CDS 25.0%
!! CGCTTCAAAATATGTATTTT+GGG - chr5.2:62127818-62127837 MS.gene99720:CDS 25.0%
!! CTTTTATTATACAGGTTTCA+AGG - chr5.2:62127716-62127735 MS.gene99720:CDS 25.0%
!! TATACAAATCTTCTTTTTGG+TGG - chr5.2:62125754-62125773 MS.gene99720:intron 25.0%
!! TCCTAATAGCTTTTCATTTT+AGG - chr5.2:62127456-62127475 MS.gene99720:CDS 25.0%
!! TCTTGTGACTTTTATTATAC+AGG - chr5.2:62127708-62127727 MS.gene99720:CDS 25.0%
!!! AGAATGAAGCTTTAAGAATA+AGG - chr5.2:62127185-62127204 MS.gene99720:intron 25.0%
!!! ATAAGGTTAAAAGCATTGTA+GGG - chr5.2:62125348-62125367 MS.gene99720:intron 25.0%
!!! GATTTTACAATAGCTTTAAC+TGG - chr5.2:62125278-62125297 MS.gene99720:intron 25.0%
!!! TGTCATCCATTTTAGTTTTT+GGG - chr5.2:62125003-62125022 MS.gene99720:CDS 25.0%
!!! TTGTCATCCATTTTAGTTTT+TGG - chr5.2:62125002-62125021 MS.gene99720:CDS 25.0%
AAAGAAGCTAAACAAAGAGT+TGG - chr5.2:62125374-62125393 MS.gene99720:intron 30.0%
AACTTGAAAGGGAAGTTTAT+GGG - chr5.2:62127245-62127264 MS.gene99720:intron 30.0%
AAGGGAAATCATTTACCTTA+TGG - chr5.2:62125077-62125096 MS.gene99720:CDS 30.0%
AATGTCAAGAGAAAACACAA+CGG + chr5.2:62126679-62126698 None:intergenic 30.0%
AGAAATAGAGATGGTCAAAA+TGG + chr5.2:62126593-62126612 None:intergenic 30.0%
AGAATCCCCAAAAACTAAAA+TGG + chr5.2:62125012-62125031 None:intergenic 30.0%
AGATCGTAATAAATGTGTGA+AGG - chr5.2:62126282-62126301 MS.gene99720:intron 30.0%
ATCAAACACCCTGAAAAATA+TGG - chr5.2:62126427-62126446 MS.gene99720:CDS 30.0%
ATCAAATGAAAAAGGAAGCA+AGG - chr5.2:62127212-62127231 MS.gene99720:intron 30.0%
CCCTAAAATGAAAAGCTATT+AGG + chr5.2:62127460-62127479 None:intergenic 30.0%
CTATTGTGGAAAGAACTTAT+AGG - chr5.2:62127022-62127041 MS.gene99720:intron 30.0%
GTCTACTTTGAACAAAATCT+TGG + chr5.2:62125496-62125515 None:intergenic 30.0%
TCAAATGAAAAAGGAAGCAA+GGG - chr5.2:62127213-62127232 MS.gene99720:intron 30.0%
TTAGGAAAATCTCTTCCATA+AGG + chr5.2:62125095-62125114 None:intergenic 30.0%
TTGATTGATATAGCATAGCT+TGG + chr5.2:62126520-62126539 None:intergenic 30.0%
TTTATGACATTCCAACTAGA+AGG - chr5.2:62125447-62125466 MS.gene99720:intron 30.0%
! AACTTGGCTGTTATTTGAAT+AGG + chr5.2:62126256-62126275 None:intergenic 30.0%
! GTAACTCACCATATTTTTCA+GGG + chr5.2:62126438-62126457 None:intergenic 30.0%
! TGTAACTCACCATATTTTTC+AGG + chr5.2:62126439-62126458 None:intergenic 30.0%
!! GATAAGGTTAAAAGCATTGT+AGG - chr5.2:62125347-62125366 MS.gene99720:intron 30.0%
!! GATAGATTTTGATCCAAGAA+AGG + chr5.2:62125203-62125222 None:intergenic 30.0%
!! TAAGGTTAAAAGCATTGTAG+GGG - chr5.2:62125349-62125368 MS.gene99720:intron 30.0%
!!! ATTTTTCAGGGTGTTTGATA+AGG + chr5.2:62126426-62126445 None:intergenic 30.0%
!!! GTCATCCATTTTAGTTTTTG+GGG - chr5.2:62125004-62125023 MS.gene99720:CDS 30.0%
ACAAAGAGTTGGAAATGCTT+TGG - chr5.2:62125385-62125404 MS.gene99720:intron 35.0%
ATTCCTGTGAAATTGGAACT+TGG + chr5.2:62127910-62127929 None:intergenic 35.0%
CAAAAAGATAAAGCTCAACC+AGG - chr5.2:62126910-62126929 MS.gene99720:intron 35.0%
CAACTTGAAAGGGAAGTTTA+TGG - chr5.2:62127244-62127263 MS.gene99720:intron 35.0%
CATAAAATATGCAAGGTCCA+GGG + chr5.2:62125820-62125839 None:intergenic 35.0%
GAAACAAACAAAGGATGTTG+TGG - chr5.2:62127738-62127757 MS.gene99720:CDS 35.0%
GGTTTCAAGGAAACAAACAA+AGG - chr5.2:62127729-62127748 MS.gene99720:CDS 35.0%
TCAAATGAAGAGCTTCTAAC+TGG - chr5.2:62125221-62125240 MS.gene99720:intron 35.0%
TGAATAGGTATGCAACCAAT+AGG + chr5.2:62126241-62126260 None:intergenic 35.0%
TGTGAAGGAAGAGAATTTAG+AGG - chr5.2:62126297-62126316 MS.gene99720:intron 35.0%
TGTTTGATAAGGCCAATCAA+GGG + chr5.2:62126415-62126434 None:intergenic 35.0%
TTCCTGTGAAATTGGAACTT+GGG + chr5.2:62127909-62127928 None:intergenic 35.0%
TTTCCTAATCATGTACCTAC+TGG - chr5.2:62125107-62125126 MS.gene99720:CDS 35.0%
! ACAAGTAATGGGAGAGTTAA+TGG - chr5.2:62126777-62126796 MS.gene99720:intron 35.0%
! CAAGTAATGGGAGAGTTAAT+GGG - chr5.2:62126778-62126797 MS.gene99720:intron 35.0%
!! ACAAATCTTCTTTTTGGTGG+TGG - chr5.2:62125757-62125776 MS.gene99720:intron 35.0%
!! AGATTTTGATCCAAGAAAGG+AGG + chr5.2:62125200-62125219 None:intergenic 35.0%
!! GATTTTGATCCAAGAAAGGA+GGG + chr5.2:62125199-62125218 None:intergenic 35.0%
!! GGTTGAGCTTTATCTTTTTG+TGG + chr5.2:62126910-62126929 None:intergenic 35.0%
!! TAAACTTCCCTTTCAAGTTG+AGG + chr5.2:62127244-62127263 None:intergenic 35.0%
AACAAAGGATGTTGTGGAAC+TGG - chr5.2:62127744-62127763 MS.gene99720:CDS 40.0%
AACATATATGGCCCCTTGAT+TGG - chr5.2:62126400-62126419 MS.gene99720:intron 40.0%
AGGATTGAGTCTACTAGAAG+AGG - chr5.2:62126930-62126949 MS.gene99720:intron 40.0%
AGGTTGGAGTTCAACATTAG+TGG - chr5.2:62125467-62125486 MS.gene99720:intron 40.0%
ATAGGTATGCAACCAATAGG+AGG + chr5.2:62126238-62126257 None:intergenic 40.0%
CAAATGGGGCCTATATTTCT+TGG - chr5.2:62127598-62127617 MS.gene99720:CDS 40.0%
CCATTAGAGAATCTACCAGT+AGG + chr5.2:62125125-62125144 None:intergenic 40.0%
CCTACTGGTAGATTCTCTAA+TGG - chr5.2:62125122-62125141 MS.gene99720:intron 40.0%
CTACCAGTAGGTACATGATT+AGG + chr5.2:62125113-62125132 None:intergenic 40.0%
GCATAAAATATGCAAGGTCC+AGG + chr5.2:62125821-62125840 None:intergenic 40.0%
GGAAGAGAATTTAGAGGCTA+AGG - chr5.2:62126303-62126322 MS.gene99720:intron 40.0%
GGATAGTCCTCAACTTGAAA+GGG - chr5.2:62127234-62127253 MS.gene99720:intron 40.0%
GGTGTGAGTTCATTACACAA+TGG + chr5.2:62127786-62127805 None:intergenic 40.0%
GTCATTGCTTGAAGCAACAT+TGG + chr5.2:62124964-62124983 None:intergenic 40.0%
GTCTTATAGCGTTGCAAATG+AGG - chr5.2:62126958-62126977 MS.gene99720:intron 40.0%
GTGTTTGATAAGGCCAATCA+AGG + chr5.2:62126416-62126435 None:intergenic 40.0%
GTTTGATAAGGCCAATCAAG+GGG + chr5.2:62126414-62126433 None:intergenic 40.0%
TACCCAAGTTCCAATTTCAC+AGG - chr5.2:62127904-62127923 MS.gene99720:CDS 40.0%
TCTTCTAGTAGACTCAATCC+TGG + chr5.2:62126931-62126950 None:intergenic 40.0%
TGACATTCCAACTAGAAGGT+TGG - chr5.2:62125451-62125470 MS.gene99720:intron 40.0%
TTGAACTCCAACCTTCTAGT+TGG + chr5.2:62125461-62125480 None:intergenic 40.0%
! ATGAAGTTAAGGCTTTGGCT+CGG - chr5.2:62127157-62127176 MS.gene99720:intron 40.0%
! GTAAACGTCGTGCCAATTTT+TGG + chr5.2:62126336-62126355 None:intergenic 40.0%
! TACTTGTTGGTTGCTTCACT+TGG + chr5.2:62127855-62127874 None:intergenic 40.0%
! TTTGAAGCGTCATCACATAC+AGG + chr5.2:62127807-62127826 None:intergenic 40.0%
!!! ATCTTCTTTTTGGTGGTGGT+CGG - chr5.2:62125761-62125780 MS.gene99720:intron 40.0%
AAGGAGGGATGGTTTCTTTG+AGG + chr5.2:62125184-62125203 None:intergenic 45.0%
AGAAACCATCCCTCCTTTCT+TGG - chr5.2:62125187-62125206 MS.gene99720:intron 45.0%
ATGGTCAAAATGGCTGCTAG+TGG + chr5.2:62126583-62126602 None:intergenic 45.0%
GCTTGAAGCAACATTGGCAA+TGG + chr5.2:62124958-62124977 None:intergenic 45.0%
GGGATAGTCCTCAACTTGAA+AGG - chr5.2:62127233-62127252 MS.gene99720:intron 45.0%
TTGATCCAAGAAAGGAGGGA+TGG + chr5.2:62125195-62125214 None:intergenic 45.0%
TTGTAGGAACTGTACGAGCT+CGG - chr5.2:62126184-62126203 MS.gene99720:intron 45.0%
! GCTTTGGTGATCATTAGTGC+TGG - chr5.2:62125401-62125420 MS.gene99720:intron 45.0%
! TTCGACCTTTTAGTGGTGGT+CGG - chr5.2:62125786-62125805 MS.gene99720:intron 45.0%
!! ACTGGTGTTAGCTTTGCATC+TGG - chr5.2:62125239-62125258 MS.gene99720:intron 45.0%
!! CGGATGCAGAAAATTTGCTG+TGG - chr5.2:62126204-62126223 MS.gene99720:intron 45.0%
!! GCAGAAAATTTGCTGTGGCT+GGG - chr5.2:62126209-62126228 MS.gene99720:intron 45.0%
!! TGCAGAAAATTTGCTGTGGC+TGG - chr5.2:62126208-62126227 MS.gene99720:intron 45.0%
!!! TCTTCTTTTTGGTGGTGGTC+GGG - chr5.2:62125762-62125781 MS.gene99720:intron 45.0%
!!! AAAAAAATGTATTTTTTTTT+AGG + chr5.2:62126002-62126021 None:intergenic 5.0%
!!! AAAAAATGTATTTTTTTTTA+GGG + chr5.2:62126001-62126020 None:intergenic 5.0%
AGCTTTGCATCTGGAGGATC+TGG - chr5.2:62125248-62125267 MS.gene99720:intron 50.0%
GGGGATTCTACAGTTGACAC+AGG - chr5.2:62125023-62125042 MS.gene99720:CDS 50.0%
! TCGACCTTTTAGTGGTGGTC+GGG - chr5.2:62125787-62125806 MS.gene99720:intron 50.0%
! TGAGCTCAGCTCAGTTGGTA+GGG + chr5.2:62125850-62125869 None:intergenic 50.0%
!! GGTGTTAGCTTTGCATCTGG+AGG - chr5.2:62125242-62125261 MS.gene99720:intron 50.0%
!!! CTTCTTTTTGGTGGTGGTCG+GGG - chr5.2:62125763-62125782 MS.gene99720:intron 50.0%
GAACCCCGACCACCACTAAA+AGG + chr5.2:62125794-62125813 None:intergenic 55.0%
GTGAGCTCAGCTCAGTTGGT+AGG + chr5.2:62125851-62125870 None:intergenic 55.0%
! CGACCTTTTAGTGGTGGTCG+GGG - chr5.2:62125788-62125807 MS.gene99720:intron 55.0%
! GGGGTTCGACCTTTTAGTGG+TGG - chr5.2:62125782-62125801 MS.gene99720:intron 55.0%
! GTCGGGGTTCGACCTTTTAG+TGG - chr5.2:62125779-62125798 MS.gene99720:intron 55.0%
CCAACTGAGCTGAGCTCACG+AGG - chr5.2:62125852-62125871 MS.gene99720:intron 60.0%
CCTCGTGAGCTCAGCTCAGT+TGG + chr5.2:62125855-62125874 None:intergenic 60.0%
GTGGCTGGGCTTCCTCCTAT+TGG - chr5.2:62126223-62126242 MS.gene99720:intron 60.0%
GGTGGTCGGGGTTCGAACCC+TGG - chr5.2:62125800-62125819 MS.gene99720:intron 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 62124912 62127947 62124912 ID=MS.gene99720
chr5.2 mRNA 62124912 62127947 62124912 ID=MS.gene99720.t1;Parent=MS.gene99720
chr5.2 exon 62127327 62127947 62127327 ID=MS.gene99720.t1.exon1;Parent=MS.gene99720.t1
chr5.2 CDS 62127327 62127947 62127327 ID=cds.MS.gene99720.t1;Parent=MS.gene99720.t1
chr5.2 exon 62126411 62126669 62126411 ID=MS.gene99720.t1.exon2;Parent=MS.gene99720.t1
chr5.2 CDS 62126411 62126669 62126411 ID=cds.MS.gene99720.t1;Parent=MS.gene99720.t1
chr5.2 exon 62124912 62125129 62124912 ID=MS.gene99720.t1.exon3;Parent=MS.gene99720.t1
chr5.2 CDS 62124912 62125129 62124912 ID=cds.MS.gene99720.t1;Parent=MS.gene99720.t1
Gene Sequence

>MS.gene99720

ATGGTTTATGCGATTCCCTTTATCATTTTAATGCACGTTTGCACCATTGCCAATGTTGCTTCAAGCAATGACTTGAAATTGAGAACAAAATTGTCATCCATTTTAGTTTTTGGGGATTCTACAGTTGACACAGGAAATAACAACTACATCAAAAAAACATTGATAAAGGGAAATCATTTACCTTATGGAAGAGATTTTCCTAATCATGTACCTACTGGTAGATTCTCTAATGGAAAATTGGCTATAGACTTTCTTGCATCAACATTAAACCTCAAAGAAACCATCCCTCCTTTCTTGGATCAAAATCTATCAAATGAAGAGCTTCTAACTGGTGTTAGCTTTGCATCTGGAGGATCTGGTTTTGATGATTTTACAATAGCTTTAACTGGTGCTATATCAATGTCTAAACAAGTTGAATATTTCAAAGATTATGTGGATAAGGTTAAAAGCATTGTAGGGGAAAAAGAAGCTAAACAAAGAGTTGGAAATGCTTTGGTGATCATTAGTGCTGGAACTAATGACTTTCTTTTCAATTTTTATGACATTCCAACTAGAAGGTTGGAGTTCAACATTAGTGGATACCAAGATTTTGTTCAAAGTAGACTTCAAATTTTCATTAAGGTAAGTTTGATTAGAATTATTTTCTTTTTTGGTATCATCAATTAGAATTCATTAATTAAAAATCATAGATATATATATATATATATATATATATATATATATATATATATATATATTATATATATATATCAACAGTACTAAATTTTTATACTTTAATCATAGATATATATATATATATATATATATATATATATATATATATATCAACAGTACTAAATTTTTATACAAATCTTCTTTTTGGTGGTGGTCGGGGTTCGACCTTTTAGTGGTGGTCGGGGTTCGAACCCTGGACCTTGCATATTTTATGCATTTGTCCCTACCAACTGAGCTGAGCTCACGAGGACTTTTATATAAATCTTCAATCATATATATTTCATCAAGGTGACATATCATATTTATCATTTTCATTTAAATATTGAAATATGTTTATTGTAATATGTGATTCAATACATGTATGATTCTTTTCCCTAAAAAAAAATACATTTTTTTATTCTGACGGTCTATACTAATTAAACTCATCAATTATAAAAAAAAATGGGTAATGTTTATTTAATTCTTAAAAAATTTCTAACAAAAATTCACATAACTATTACTATAAATTCATTTCAGCATATGATTTTTATCTTTATTTAAAATAAATTTCTTAAAAAATTGTAGGAACTGTACGAGCTCGGATGCAGAAAATTTGCTGTGGCTGGGCTTCCTCCTATTGGTTGCATACCTATTCAAATAACAGCCAAGTTTGTAAAAGATCGTAATAAATGTGTGAAGGAAGAGAATTTAGAGGCTAAGGATTACAACCAAAAATTGGCACGACGTTTACTTCAATTACAAGCAATTATTTCAGGAAGCAGAGTTATTTATACAAACATATATGGCCCCTTGATTGGCCTTATCAAACACCCTGAAAAATATGGTGAGTTACAATTATCAATATTATTATTCTTTTCTTCCCTTTTATGTTCAATTTGTCAAACTTTTTCTCCAAGCTATGCTATATCAATCAAATGATGATTAAGTAACTTTTTTCTAATGTGGAATTCTAATCCACTAGCAGCCATTTTGACCATCTCTATTTCTAAGATAGATGTAAAACTCTTAACTCTCATCTGTCTAAGTCTTGCAAAATAATCATCGACAAATCCGTTGTGTTTTCTCTTGACATTGAATTGATAATGGTAATTGCTAAAGAAAAATTTGCCAACAGAGATAAAATTTAATGGGAGATTTTTTTTTTTTTTTTGACAAGTAATGGGAGAGTTAATGGGCGACGATCTTTGTCTTTTTTCAAAAAATTATGTTAAATAGTTTATTCTTTATGTATGATAGTTAAGATTTTTTCTTTAAATTTGTTTGAACTTTAGAAACGTTATTCCACAAAAAGATAAAGCTCAACCAGGATTGAGTCTACTAGAAGAGGCTAGAGTCTTATAGCGTTGCAAATGAGGAACCTATATTTAGTGTCTGATAGTATCTAAAATATGATTATCTATTGTGGAAAGAACTTATAGGAAACCAAAAAATAAATATAAAGTCCAAGCTTGAATATTTTTTTTTTAAAAAAAAAAATTTAAGTTTGAACTTTATATTTATTTTAAAGAATATTTTAAAAATAACAGAAAAAATGAAGTTAAGGCTTTGGCTCGGAGTTTAGAATGAAGCTTTAAGAATAAGGAATAATCAAATGAAAAAGGAAGCAAGGGATAGTCCTCAACTTGAAAGGGAAGTTTATGGGTGCGTTTGTTTTAGCTTTAAAAAATAGATTTTTTTTTTTTAGAGATTTAAAGAAAAATATGACGTTATTTTTGTTTGTCTACAATGCATAAAAATCAATATTTTTTTTTTAAAAAAAAAAAAAGAGTTTTAACTTGTACATGTGTACCTCCTTGTTTTTGAAAAAAAATAGATTTTGAGAAAAGCTAATCCTAATAGCTTTTCATTTTAGGGTCAAAATAGTTTTTTTTTGATAAAATAATTTTTCTTAAAATCCTAAACAAACACTTAAAAATGAAAAAAGTGATCTTTTAAAGAAAAAATAGATTTTTTTTTTGAAAATAATCTGAAACAAATGGGGCCTATATTTCTTGGTAATGAAAAATGCATTTGAGAAATTTTTTAGAAAGTTTTAAAGAGTTTATATAAATTATTCAAATTCTTTCAATGCCTTTATAATATTCTTGTGACTTTTATTATACAGGTTTCAAGGAAACAAACAAAGGATGTTGTGGAACTGGCATATTTGAAGTAACTCCATTGTGTAATGAACTCACACCTGTATGTGATGACGCTTCAAAATATGTATTTTGGGACAGTGTGCATCCAAGTGAAGCAACCAACAAGTATATTACTAAATACATAGAATTGGAAGTTCTACCCAAGTTCCAATTTCACAGGAATTGTAAATTTGAAGTATAG
Protein sequence

>MS.gene99720.t1

MVYAIPFIILMHVCTIANVASSNDLKLRTKLSSILVFGDSTVDTGNNNYIKKTLIKGNHLPYGRDFPNHVPTGRFSNGKLAIDFLASTLNLKETIPPFLDQNLSNEELLTGVSFASGGSGFDDFTIALTGAISMSKQVEYFKDYVDKVKSIVGEKEAKQRVGNALVIISAGTNDFLFNFYDIPTRRLEFNISGYQDFVQSRLQIFIKELYELGCRKFAVAGLPPIGCIPIQITAKFVKDRNKCVKEENLEAKDYNQKLARRLLQLQAIISGSRVIYTNIYGPLIGLIKHPEKYGFKETNKGCCGTGIFEVTPLCNELTPVCDDASKYVFWDSVHPSEATNKYITKYIELEVLPKFQFHRNCKFEV