Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060245.t1 | XP_003615938.1 | 85.8 | 367 | 15 | 3 | 1 | 331 | 1 | 366 | 9.70E-174 | 619.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060245.t1 | O22927 | 46.1 | 343 | 145 | 4 | 10 | 317 | 16 | 353 | 4.5e-87 | 322.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060245.t1 | G7K5S1 | 85.8 | 367 | 15 | 3 | 1 | 331 | 1 | 366 | 7.0e-174 | 619.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060245 | MS.gene67244 | 0.868766 | 5.11E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007245 | MS.gene060245 | PPI |
| MS.gene76079 | MS.gene060245 | PPI |
| MS.gene034892 | MS.gene060245 | PPI |
| MS.gene071231 | MS.gene060245 | PPI |
| MS.gene81724 | MS.gene060245 | PPI |
| MS.gene29675 | MS.gene060245 | PPI |
| MS.gene67244 | MS.gene060245 | PPI |
| MS.gene056856 | MS.gene060245 | PPI |
| MS.gene29676 | MS.gene060245 | PPI |
| MS.gene071232 | MS.gene060245 | PPI |
| MS.gene81723 | MS.gene060245 | PPI |
| MS.gene99720 | MS.gene060245 | PPI |
| MS.gene034894 | MS.gene060245 | PPI |
| MS.gene056855 | MS.gene060245 | PPI |
| MS.gene72322 | MS.gene060245 | PPI |
| MS.gene94225 | MS.gene060245 | PPI |
| MS.gene72319 | MS.gene060245 | PPI |
| MS.gene72323 | MS.gene060245 | PPI |
| MS.gene050338 | MS.gene060245 | PPI |
| MS.gene034893 | MS.gene060245 | PPI |
| MS.gene81725 | MS.gene060245 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060245.t1 | MTR_5g074270 | 85.831 | 367 | 15 | 3 | 1 | 331 | 1 | 366 | 0.0 | 629 |
| MS.gene060245.t1 | MTR_5g074210 | 92.481 | 133 | 10 | 0 | 198 | 330 | 89 | 221 | 1.42e-90 | 270 |
| MS.gene060245.t1 | MTR_4g087985 | 40.510 | 353 | 161 | 6 | 9 | 318 | 17 | 363 | 4.47e-88 | 269 |
| MS.gene060245.t1 | MTR_2g015080 | 40.118 | 339 | 153 | 7 | 9 | 303 | 18 | 350 | 3.53e-81 | 251 |
| MS.gene060245.t1 | MTR_1g025780 | 39.701 | 335 | 165 | 5 | 2 | 303 | 12 | 342 | 2.13e-78 | 244 |
| MS.gene060245.t1 | MTR_3g082830 | 39.144 | 327 | 164 | 4 | 29 | 321 | 34 | 359 | 8.23e-78 | 242 |
| MS.gene060245.t1 | MTR_3g114120 | 39.815 | 324 | 157 | 4 | 31 | 321 | 45 | 363 | 1.97e-77 | 241 |
| MS.gene060245.t1 | MTR_3g114090 | 37.429 | 350 | 179 | 4 | 5 | 314 | 6 | 355 | 1.47e-75 | 236 |
| MS.gene060245.t1 | MTR_5g084750 | 38.066 | 331 | 170 | 4 | 26 | 322 | 23 | 352 | 3.54e-75 | 235 |
| MS.gene060245.t1 | MTR_1g025760 | 37.151 | 358 | 179 | 7 | 7 | 326 | 50 | 399 | 8.60e-75 | 236 |
| MS.gene060245.t1 | MTR_1g025700 | 36.467 | 351 | 187 | 4 | 7 | 322 | 22 | 371 | 6.18e-74 | 233 |
| MS.gene060245.t1 | MTR_5g084770 | 36.810 | 326 | 170 | 4 | 31 | 321 | 26 | 350 | 8.22e-74 | 231 |
| MS.gene060245.t1 | MTR_8g014910 | 38.801 | 317 | 158 | 5 | 29 | 310 | 28 | 343 | 2.01e-73 | 231 |
| MS.gene060245.t1 | MTR_1g025680 | 37.183 | 355 | 177 | 5 | 5 | 316 | 8 | 359 | 3.17e-73 | 233 |
| MS.gene060245.t1 | MTR_2g100620 | 39.748 | 317 | 155 | 5 | 29 | 310 | 27 | 342 | 4.63e-73 | 230 |
| MS.gene060245.t1 | MTR_3g464730 | 37.069 | 348 | 173 | 7 | 9 | 321 | 14 | 350 | 4.93e-73 | 229 |
| MS.gene060245.t1 | MTR_1g025720 | 37.975 | 316 | 162 | 3 | 25 | 307 | 29 | 343 | 1.58e-72 | 229 |
| MS.gene060245.t1 | MTR_5g084790 | 36.364 | 330 | 175 | 4 | 26 | 321 | 25 | 353 | 1.76e-72 | 228 |
| MS.gene060245.t1 | MTR_8g075230 | 37.576 | 330 | 166 | 5 | 8 | 303 | 16 | 339 | 5.71e-71 | 224 |
| MS.gene060245.t1 | MTR_8g075200 | 37.110 | 353 | 186 | 5 | 3 | 321 | 12 | 362 | 6.07e-71 | 226 |
| MS.gene060245.t1 | MTR_8g075220 | 37.714 | 350 | 177 | 7 | 3 | 313 | 11 | 358 | 6.27e-70 | 222 |
| MS.gene060245.t1 | MTR_5g022630 | 37.582 | 306 | 156 | 4 | 33 | 303 | 43 | 348 | 1.34e-67 | 216 |
| MS.gene060245.t1 | MTR_5g022640 | 34.604 | 341 | 184 | 6 | 1 | 303 | 8 | 347 | 1.04e-66 | 214 |
| MS.gene060245.t1 | MTR_4g056160 | 36.728 | 324 | 167 | 4 | 33 | 319 | 27 | 349 | 1.72e-66 | 213 |
| MS.gene060245.t1 | MTR_5g083040 | 37.580 | 314 | 154 | 5 | 30 | 303 | 29 | 340 | 2.19e-66 | 213 |
| MS.gene060245.t1 | MTR_1g025910 | 37.248 | 298 | 154 | 5 | 38 | 303 | 41 | 337 | 2.27e-62 | 203 |
| MS.gene060245.t1 | MTR_2g084585 | 35.714 | 322 | 172 | 4 | 23 | 310 | 20 | 340 | 5.91e-61 | 199 |
| MS.gene060245.t1 | MTR_4g056280 | 35.238 | 315 | 169 | 5 | 33 | 313 | 30 | 343 | 2.81e-56 | 187 |
| MS.gene060245.t1 | MTR_7g116520 | 30.769 | 338 | 197 | 5 | 11 | 313 | 12 | 347 | 1.39e-51 | 175 |
| MS.gene060245.t1 | MTR_6g021530 | 34.385 | 317 | 170 | 8 | 33 | 313 | 29 | 343 | 3.07e-51 | 174 |
| MS.gene060245.t1 | MTR_7g116570 | 31.686 | 344 | 196 | 6 | 5 | 313 | 8 | 347 | 4.75e-51 | 173 |
| MS.gene060245.t1 | MTR_7g116500 | 29.825 | 342 | 200 | 6 | 5 | 311 | 8 | 344 | 8.23e-51 | 172 |
| MS.gene060245.t1 | MTR_1g069175 | 30.769 | 325 | 188 | 5 | 25 | 313 | 25 | 348 | 1.16e-49 | 170 |
| MS.gene060245.t1 | MTR_5g093090 | 30.816 | 331 | 192 | 4 | 13 | 307 | 8 | 337 | 6.14e-48 | 165 |
| MS.gene060245.t1 | MTR_1g079540 | 30.409 | 342 | 198 | 6 | 10 | 313 | 5 | 344 | 1.18e-47 | 164 |
| MS.gene060245.t1 | MTR_4g019880 | 31.529 | 314 | 176 | 9 | 33 | 309 | 32 | 343 | 2.13e-47 | 164 |
| MS.gene060245.t1 | MTR_2g033920 | 33.125 | 320 | 172 | 6 | 30 | 311 | 32 | 347 | 6.03e-47 | 162 |
| MS.gene060245.t1 | MTR_5g009100 | 29.874 | 318 | 178 | 6 | 35 | 313 | 48 | 359 | 1.01e-45 | 160 |
| MS.gene060245.t1 | MTR_1g079530 | 30.409 | 342 | 191 | 8 | 9 | 313 | 5 | 336 | 1.80e-45 | 159 |
| MS.gene060245.t1 | MTR_1g024890 | 30.931 | 333 | 193 | 7 | 16 | 313 | 15 | 345 | 2.75e-45 | 158 |
| MS.gene060245.t1 | MTR_8g087890 | 33.439 | 314 | 167 | 8 | 35 | 311 | 33 | 341 | 4.34e-45 | 157 |
| MS.gene060245.t1 | MTR_5g093550 | 90.541 | 74 | 7 | 0 | 257 | 330 | 76 | 149 | 9.74e-45 | 150 |
| MS.gene060245.t1 | MTR_3g052490 | 31.847 | 314 | 177 | 6 | 30 | 307 | 29 | 341 | 1.34e-44 | 156 |
| MS.gene060245.t1 | MTR_7g116510 | 30.599 | 317 | 182 | 5 | 33 | 313 | 25 | 339 | 1.42e-44 | 156 |
| MS.gene060245.t1 | MTR_2g033930 | 31.975 | 319 | 173 | 7 | 33 | 313 | 32 | 344 | 1.02e-43 | 154 |
| MS.gene060245.t1 | MTR_3g024510 | 30.117 | 342 | 194 | 9 | 10 | 311 | 12 | 348 | 8.13e-43 | 152 |
| MS.gene060245.t1 | MTR_0565s0010 | 30.892 | 314 | 176 | 7 | 35 | 311 | 34 | 343 | 5.42e-42 | 149 |
| MS.gene060245.t1 | MTR_8g079050 | 32.378 | 349 | 190 | 10 | 9 | 313 | 11 | 357 | 6.55e-42 | 149 |
| MS.gene060245.t1 | MTR_4g122200 | 31.562 | 320 | 177 | 6 | 30 | 311 | 32 | 347 | 2.75e-41 | 147 |
| MS.gene060245.t1 | MTR_3g098270 | 33.229 | 319 | 173 | 8 | 31 | 311 | 32 | 348 | 2.57e-40 | 145 |
| MS.gene060245.t1 | MTR_3g052480 | 31.661 | 319 | 172 | 8 | 30 | 307 | 30 | 343 | 3.28e-40 | 145 |
| MS.gene060245.t1 | MTR_4g035353 | 30.284 | 317 | 182 | 7 | 30 | 310 | 28 | 341 | 3.68e-40 | 144 |
| MS.gene060245.t1 | MTR_5g078210 | 27.607 | 326 | 200 | 6 | 19 | 311 | 12 | 334 | 4.49e-40 | 144 |
| MS.gene060245.t1 | MTR_3g052580 | 30.063 | 316 | 183 | 7 | 30 | 309 | 25 | 338 | 1.11e-39 | 144 |
| MS.gene060245.t1 | MTR_4g108690 | 29.141 | 326 | 190 | 8 | 36 | 326 | 30 | 349 | 1.22e-39 | 143 |
| MS.gene060245.t1 | MTR_8g022810 | 30.857 | 350 | 195 | 11 | 1 | 310 | 10 | 352 | 1.68e-39 | 143 |
| MS.gene060245.t1 | MTR_3g052580 | 30.063 | 316 | 183 | 7 | 30 | 309 | 24 | 337 | 2.06e-39 | 144 |
| MS.gene060245.t1 | MTR_3g435540 | 28.923 | 325 | 192 | 6 | 35 | 325 | 25 | 344 | 4.96e-39 | 142 |
| MS.gene060245.t1 | MTR_7g008060 | 27.011 | 348 | 204 | 7 | 1 | 313 | 1 | 333 | 2.84e-38 | 139 |
| MS.gene060245.t1 | MTR_3g005650 | 29.114 | 316 | 184 | 10 | 30 | 311 | 27 | 336 | 3.77e-36 | 134 |
| MS.gene060245.t1 | MTR_2g044100 | 26.558 | 369 | 217 | 9 | 5 | 325 | 11 | 373 | 1.70e-35 | 133 |
| MS.gene060245.t1 | MTR_0009s0250 | 30.909 | 330 | 186 | 12 | 19 | 316 | 19 | 338 | 6.56e-34 | 127 |
| MS.gene060245.t1 | MTR_8g074570 | 28.693 | 352 | 195 | 11 | 3 | 310 | 11 | 350 | 1.58e-33 | 127 |
| MS.gene060245.t1 | MTR_8g022790 | 27.640 | 322 | 188 | 8 | 27 | 313 | 31 | 342 | 1.59e-33 | 127 |
| MS.gene060245.t1 | MTR_5g093090 | 30.986 | 284 | 159 | 4 | 13 | 260 | 8 | 290 | 1.63e-33 | 125 |
| MS.gene060245.t1 | MTR_3g005660 | 28.261 | 322 | 187 | 10 | 30 | 311 | 33 | 350 | 1.87e-33 | 127 |
| MS.gene060245.t1 | MTR_1108s0010 | 35.000 | 200 | 107 | 3 | 137 | 313 | 3 | 202 | 7.02e-33 | 121 |
| MS.gene060245.t1 | MTR_1g079590 | 36.269 | 193 | 118 | 4 | 13 | 202 | 11 | 201 | 2.18e-32 | 120 |
| MS.gene060245.t1 | MTR_2g017915 | 30.847 | 295 | 173 | 10 | 28 | 304 | 28 | 309 | 6.55e-32 | 122 |
| MS.gene060245.t1 | MTR_8g031420 | 26.901 | 342 | 205 | 9 | 9 | 313 | 11 | 344 | 7.69e-32 | 122 |
| MS.gene060245.t1 | MTR_2g017965 | 29.595 | 321 | 177 | 12 | 28 | 310 | 28 | 337 | 8.77e-32 | 122 |
| MS.gene060245.t1 | MTR_2g017925 | 30.938 | 320 | 169 | 12 | 28 | 310 | 28 | 332 | 9.07e-32 | 122 |
| MS.gene060245.t1 | MTR_8g031430 | 29.430 | 316 | 182 | 10 | 33 | 313 | 37 | 346 | 1.24e-31 | 122 |
| MS.gene060245.t1 | MTR_8g022810 | 29.283 | 321 | 185 | 12 | 1 | 310 | 10 | 299 | 1.27e-31 | 121 |
| MS.gene060245.t1 | MTR_4g036375 | 37.423 | 163 | 97 | 2 | 33 | 191 | 30 | 191 | 7.36e-31 | 115 |
| MS.gene060245.t1 | MTR_8g031390 | 28.391 | 317 | 183 | 9 | 33 | 313 | 37 | 345 | 8.20e-31 | 120 |
| MS.gene060245.t1 | MTR_5g093090 | 37.017 | 181 | 105 | 4 | 13 | 186 | 8 | 186 | 5.56e-30 | 114 |
| MS.gene060245.t1 | MTR_2g461580 | 28.923 | 325 | 180 | 10 | 22 | 310 | 20 | 329 | 1.90e-29 | 115 |
| MS.gene060245.t1 | MTR_8g087870 | 28.012 | 332 | 189 | 11 | 28 | 323 | 24 | 341 | 1.72e-28 | 113 |
| MS.gene060245.t1 | MTR_3g023220 | 29.560 | 318 | 164 | 13 | 30 | 307 | 30 | 327 | 2.11e-28 | 113 |
| MS.gene060245.t1 | MTR_3g021460 | 27.914 | 326 | 182 | 11 | 22 | 310 | 20 | 329 | 5.35e-28 | 112 |
| MS.gene060245.t1 | MTR_2g033920 | 28.621 | 290 | 166 | 5 | 8 | 260 | 10 | 295 | 1.27e-27 | 110 |
| MS.gene060245.t1 | MTR_2g017875 | 26.646 | 319 | 186 | 10 | 29 | 310 | 30 | 337 | 3.21e-27 | 110 |
| MS.gene060245.t1 | MTR_8g031400 | 26.769 | 325 | 197 | 10 | 24 | 313 | 28 | 346 | 6.22e-27 | 109 |
| MS.gene060245.t1 | MTR_8g074560 | 26.409 | 337 | 206 | 9 | 7 | 303 | 5 | 339 | 1.95e-26 | 107 |
| MS.gene060245.t1 | MTR_2g017955 | 28.481 | 316 | 178 | 11 | 28 | 306 | 28 | 332 | 2.30e-26 | 107 |
| MS.gene060245.t1 | MTR_3g463960 | 30.000 | 370 | 189 | 17 | 5 | 311 | 6 | 368 | 3.24e-26 | 107 |
| MS.gene060245.t1 | MTR_3g463950 | 30.000 | 370 | 189 | 17 | 5 | 311 | 6 | 368 | 3.24e-26 | 107 |
| MS.gene060245.t1 | MTR_3g463970 | 30.000 | 370 | 189 | 17 | 5 | 311 | 6 | 368 | 3.24e-26 | 107 |
| MS.gene060245.t1 | MTR_3g463940 | 30.000 | 370 | 189 | 17 | 5 | 311 | 6 | 368 | 3.24e-26 | 107 |
| MS.gene060245.t1 | MTR_1g030275 | 27.920 | 351 | 189 | 14 | 33 | 327 | 39 | 381 | 5.23e-26 | 107 |
| MS.gene060245.t1 | MTR_2g015630 | 27.134 | 328 | 176 | 13 | 38 | 310 | 36 | 355 | 1.33e-25 | 105 |
| MS.gene060245.t1 | MTR_1g030268 | 27.350 | 351 | 191 | 14 | 33 | 327 | 40 | 382 | 5.92e-25 | 104 |
| MS.gene060245.t1 | MTR_5g078210 | 25.818 | 275 | 169 | 5 | 19 | 260 | 12 | 284 | 6.49e-25 | 103 |
| MS.gene060245.t1 | MTR_4g036385 | 43.689 | 103 | 57 | 1 | 208 | 309 | 21 | 123 | 2.02e-24 | 97.1 |
| MS.gene060245.t1 | MTR_7g111780 | 29.730 | 333 | 170 | 15 | 29 | 313 | 32 | 348 | 5.27e-24 | 101 |
| MS.gene060245.t1 | MTR_8g031390 | 28.782 | 271 | 154 | 8 | 33 | 272 | 37 | 299 | 2.61e-23 | 98.6 |
| MS.gene060245.t1 | MTR_2g015590 | 28.902 | 346 | 186 | 15 | 32 | 323 | 30 | 369 | 2.62e-23 | 99.4 |
| MS.gene060245.t1 | MTR_2g015580 | 26.966 | 356 | 199 | 12 | 29 | 331 | 43 | 390 | 2.69e-23 | 99.8 |
| MS.gene060245.t1 | MTR_8g028160 | 26.757 | 370 | 189 | 15 | 28 | 330 | 31 | 385 | 5.76e-23 | 98.6 |
| MS.gene060245.t1 | MTR_8g074580 | 25.369 | 406 | 211 | 13 | 3 | 326 | 17 | 412 | 9.33e-23 | 98.2 |
| MS.gene060245.t1 | MTR_7g116870 | 27.171 | 357 | 190 | 14 | 33 | 330 | 33 | 378 | 4.97e-22 | 95.9 |
| MS.gene060245.t1 | MTR_1g030340 | 26.757 | 370 | 192 | 15 | 3 | 309 | 14 | 367 | 6.52e-22 | 95.5 |
| MS.gene060245.t1 | MTR_1g030230 | 25.789 | 380 | 208 | 14 | 8 | 327 | 11 | 376 | 6.60e-22 | 95.5 |
| MS.gene060245.t1 | MTR_4g104240 | 25.895 | 363 | 209 | 12 | 1 | 310 | 1 | 356 | 7.00e-22 | 95.5 |
| MS.gene060245.t1 | MTR_4g056220 | 43.590 | 117 | 65 | 1 | 198 | 313 | 64 | 180 | 9.43e-22 | 91.7 |
| MS.gene060245.t1 | MTR_2g018015 | 29.514 | 288 | 155 | 12 | 29 | 310 | 32 | 277 | 1.40e-21 | 93.6 |
| MS.gene060245.t1 | MTR_7g033165 | 26.000 | 350 | 188 | 12 | 24 | 313 | 24 | 362 | 7.26e-21 | 92.4 |
| MS.gene060245.t1 | MTR_2g087292 | 27.213 | 305 | 161 | 10 | 19 | 316 | 19 | 269 | 3.74e-20 | 89.0 |
| MS.gene060245.t1 | MTR_6g034400 | 37.838 | 111 | 69 | 0 | 88 | 198 | 5 | 115 | 7.36e-20 | 84.3 |
| MS.gene060245.t1 | MTR_7g104220 | 25.959 | 339 | 177 | 15 | 31 | 322 | 40 | 351 | 8.12e-20 | 89.4 |
| MS.gene060245.t1 | MTR_5g087690 | 25.000 | 340 | 194 | 11 | 15 | 311 | 34 | 355 | 1.20e-19 | 89.0 |
| MS.gene060245.t1 | MTR_8g089805 | 26.496 | 351 | 169 | 13 | 33 | 313 | 40 | 371 | 2.79e-19 | 88.2 |
| MS.gene060245.t1 | MTR_1g060490 | 27.164 | 335 | 183 | 14 | 21 | 316 | 27 | 339 | 3.95e-19 | 87.0 |
| MS.gene060245.t1 | MTR_6g049220 | 39.640 | 111 | 64 | 2 | 31 | 141 | 28 | 135 | 1.65e-18 | 82.0 |
| MS.gene060245.t1 | MTR_1g092690 | 24.586 | 362 | 200 | 15 | 5 | 316 | 14 | 352 | 3.71e-18 | 84.7 |
| MS.gene060245.t1 | MTR_6g049230 | 38.583 | 127 | 74 | 2 | 173 | 295 | 68 | 194 | 1.12e-17 | 80.5 |
| MS.gene060245.t1 | MTR_1g092750 | 26.791 | 321 | 179 | 14 | 34 | 316 | 41 | 343 | 1.92e-17 | 82.4 |
| MS.gene060245.t1 | MTR_1g092760 | 28.308 | 325 | 168 | 16 | 34 | 316 | 40 | 341 | 2.74e-17 | 82.0 |
| MS.gene060245.t1 | MTR_7g033150 | 24.332 | 374 | 200 | 12 | 8 | 313 | 10 | 368 | 7.29e-17 | 80.9 |
| MS.gene060245.t1 | MTR_8g062580 | 35.238 | 105 | 66 | 2 | 209 | 312 | 76 | 179 | 1.33e-15 | 75.5 |
| MS.gene060245.t1 | MTR_6g007090 | 23.563 | 348 | 185 | 10 | 28 | 313 | 34 | 362 | 3.23e-15 | 76.3 |
| MS.gene060245.t1 | MTR_1g060500 | 26.380 | 326 | 181 | 14 | 34 | 316 | 41 | 350 | 8.19e-15 | 74.7 |
| MS.gene060245.t1 | MTR_1g030265 | 30.216 | 139 | 83 | 3 | 203 | 327 | 211 | 349 | 7.64e-14 | 72.0 |
| MS.gene060245.t1 | MTR_8g038680 | 23.599 | 339 | 191 | 10 | 33 | 313 | 28 | 356 | 3.19e-12 | 67.0 |
| MS.gene060245.t1 | MTR_0127s0040 | 26.147 | 218 | 118 | 6 | 132 | 310 | 4 | 217 | 4.33e-12 | 65.5 |
| MS.gene060245.t1 | MTR_7g111780 | 32.456 | 114 | 72 | 2 | 205 | 313 | 136 | 249 | 4.50e-12 | 65.9 |
| MS.gene060245.t1 | MTR_8g089805 | 30.328 | 122 | 72 | 2 | 205 | 313 | 182 | 303 | 5.53e-12 | 66.2 |
| MS.gene060245.t1 | MTR_5g062890 | 50.000 | 54 | 27 | 0 | 31 | 84 | 26 | 79 | 1.06e-11 | 60.8 |
| MS.gene060245.t1 | MTR_1g079570 | 27.835 | 97 | 70 | 0 | 217 | 313 | 26 | 122 | 9.00e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060245.t1 | AT2G24560 | 45.481 | 343 | 147 | 4 | 10 | 317 | 16 | 353 | 1.16e-109 | 324 |
| MS.gene060245.t1 | AT2G30310 | 46.064 | 343 | 145 | 4 | 10 | 317 | 16 | 353 | 1.64e-109 | 323 |
| MS.gene060245.t1 | AT2G30220 | 47.188 | 320 | 134 | 3 | 33 | 317 | 33 | 352 | 2.23e-106 | 315 |
| MS.gene060245.t1 | AT1G58430 | 42.529 | 348 | 165 | 3 | 5 | 317 | 7 | 354 | 3.31e-105 | 312 |
| MS.gene060245.t1 | AT2G31540 | 42.090 | 354 | 170 | 3 | 4 | 322 | 6 | 359 | 2.34e-101 | 302 |
| MS.gene060245.t1 | AT1G06990 | 43.137 | 306 | 138 | 3 | 33 | 303 | 37 | 341 | 1.70e-92 | 280 |
| MS.gene060245.t1 | AT2G40250 | 43.598 | 328 | 144 | 4 | 31 | 319 | 34 | 359 | 1.17e-89 | 273 |
| MS.gene060245.t1 | AT2G24560 | 44.040 | 302 | 129 | 4 | 10 | 276 | 16 | 312 | 2.44e-84 | 258 |
| MS.gene060245.t1 | AT5G45960 | 40.557 | 323 | 153 | 4 | 21 | 305 | 35 | 356 | 5.21e-82 | 253 |
| MS.gene060245.t1 | AT4G26790 | 38.415 | 328 | 167 | 4 | 29 | 322 | 25 | 351 | 4.42e-81 | 250 |
| MS.gene060245.t1 | AT4G26790 | 38.415 | 328 | 167 | 4 | 29 | 322 | 25 | 351 | 4.42e-81 | 250 |
| MS.gene060245.t1 | AT2G42990 | 36.628 | 344 | 176 | 5 | 3 | 312 | 5 | 340 | 1.61e-78 | 244 |
| MS.gene060245.t1 | AT1G20120 | 38.957 | 326 | 163 | 5 | 29 | 319 | 74 | 398 | 3.55e-77 | 242 |
| MS.gene060245.t1 | AT1G75900 | 38.235 | 340 | 174 | 5 | 8 | 313 | 18 | 355 | 8.05e-76 | 237 |
| MS.gene060245.t1 | AT1G75890 | 39.375 | 320 | 159 | 5 | 33 | 317 | 47 | 366 | 3.00e-74 | 233 |
| MS.gene060245.t1 | AT1G75890 | 39.375 | 320 | 159 | 5 | 33 | 317 | 76 | 395 | 4.43e-74 | 234 |
| MS.gene060245.t1 | AT2G04570 | 36.202 | 337 | 180 | 4 | 19 | 321 | 14 | 349 | 8.93e-74 | 231 |
| MS.gene060245.t1 | AT3G14820 | 37.536 | 349 | 172 | 8 | 3 | 312 | 4 | 345 | 3.82e-73 | 230 |
| MS.gene060245.t1 | AT1G75880 | 36.599 | 347 | 185 | 4 | 9 | 321 | 28 | 373 | 5.66e-71 | 225 |
| MS.gene060245.t1 | AT3G16370 | 39.617 | 313 | 153 | 5 | 33 | 310 | 30 | 341 | 1.18e-70 | 224 |
| MS.gene060245.t1 | AT1G75890 | 37.838 | 333 | 159 | 6 | 33 | 317 | 47 | 379 | 1.77e-70 | 224 |
| MS.gene060245.t1 | AT5G42170 | 37.160 | 331 | 168 | 6 | 15 | 309 | 30 | 356 | 2.55e-70 | 223 |
| MS.gene060245.t1 | AT1G75880 | 36.494 | 348 | 185 | 5 | 9 | 321 | 28 | 374 | 4.17e-69 | 220 |
| MS.gene060245.t1 | AT5G03810 | 36.697 | 327 | 171 | 4 | 28 | 319 | 25 | 350 | 5.56e-69 | 219 |
| MS.gene060245.t1 | AT5G45950 | 37.618 | 319 | 164 | 5 | 24 | 311 | 31 | 345 | 4.32e-67 | 214 |
| MS.gene060245.t1 | AT5G03820 | 35.028 | 354 | 183 | 6 | 7 | 319 | 7 | 354 | 6.91e-66 | 211 |
| MS.gene060245.t1 | AT5G03820 | 35.028 | 354 | 183 | 6 | 7 | 319 | 35 | 382 | 2.73e-65 | 211 |
| MS.gene060245.t1 | AT1G59406 | 35.174 | 344 | 180 | 8 | 1 | 309 | 1 | 336 | 3.15e-64 | 207 |
| MS.gene060245.t1 | AT1G59030 | 35.174 | 344 | 180 | 8 | 1 | 309 | 1 | 336 | 3.15e-64 | 207 |
| MS.gene060245.t1 | AT1G58725 | 35.174 | 344 | 180 | 8 | 1 | 309 | 1 | 336 | 3.15e-64 | 207 |
| MS.gene060245.t1 | AT3G53100 | 36.218 | 312 | 164 | 4 | 33 | 310 | 29 | 339 | 3.91e-64 | 207 |
| MS.gene060245.t1 | AT5G63170 | 35.366 | 328 | 162 | 7 | 8 | 303 | 10 | 319 | 4.32e-64 | 206 |
| MS.gene060245.t1 | AT1G20132 | 36.422 | 313 | 164 | 4 | 33 | 311 | 61 | 372 | 1.58e-63 | 206 |
| MS.gene060245.t1 | AT1G20135 | 35.370 | 311 | 156 | 7 | 32 | 309 | 28 | 326 | 9.45e-63 | 202 |
| MS.gene060245.t1 | AT5G22810 | 34.985 | 323 | 172 | 5 | 25 | 310 | 26 | 347 | 1.40e-61 | 200 |
| MS.gene060245.t1 | AT3G43570 | 34.824 | 313 | 183 | 7 | 8 | 309 | 5 | 307 | 2.00e-61 | 199 |
| MS.gene060245.t1 | AT1G20130 | 34.043 | 329 | 175 | 4 | 31 | 318 | 182 | 509 | 7.80e-59 | 197 |
| MS.gene060245.t1 | AT1G20130 | 34.043 | 329 | 175 | 4 | 31 | 318 | 202 | 529 | 1.04e-58 | 197 |
| MS.gene060245.t1 | AT1G58520 | 34.277 | 318 | 162 | 7 | 27 | 309 | 24 | 329 | 3.43e-58 | 191 |
| MS.gene060245.t1 | AT1G58525 | 34.277 | 318 | 162 | 7 | 27 | 309 | 24 | 329 | 3.43e-58 | 191 |
| MS.gene060245.t1 | AT1G73610 | 34.985 | 343 | 177 | 9 | 1 | 313 | 9 | 335 | 6.19e-58 | 191 |
| MS.gene060245.t1 | AT1G23500 | 36.478 | 318 | 153 | 7 | 31 | 313 | 33 | 336 | 4.70e-55 | 183 |
| MS.gene060245.t1 | AT2G31550 | 39.631 | 217 | 96 | 3 | 141 | 322 | 2 | 218 | 1.25e-54 | 178 |
| MS.gene060245.t1 | AT5G33370 | 33.228 | 316 | 174 | 5 | 33 | 313 | 30 | 343 | 1.00e-51 | 175 |
| MS.gene060245.t1 | AT1G75920 | 34.076 | 314 | 162 | 7 | 33 | 311 | 29 | 332 | 4.56e-51 | 172 |
| MS.gene060245.t1 | AT3G04290 | 30.556 | 324 | 188 | 5 | 25 | 313 | 21 | 342 | 4.27e-49 | 168 |
| MS.gene060245.t1 | AT1G75920 | 32.523 | 329 | 162 | 8 | 33 | 311 | 24 | 342 | 4.90e-47 | 162 |
| MS.gene060245.t1 | AT5G18430 | 29.968 | 317 | 185 | 4 | 33 | 313 | 28 | 343 | 5.86e-47 | 162 |
| MS.gene060245.t1 | AT4G28780 | 30.063 | 316 | 184 | 6 | 33 | 313 | 31 | 344 | 1.58e-46 | 161 |
| MS.gene060245.t1 | AT4G10950 | 29.524 | 315 | 185 | 6 | 31 | 310 | 69 | 381 | 8.41e-46 | 160 |
| MS.gene060245.t1 | AT1G75910 | 31.077 | 325 | 170 | 7 | 33 | 317 | 28 | 338 | 2.11e-44 | 155 |
| MS.gene060245.t1 | AT5G08460 | 30.925 | 346 | 192 | 10 | 5 | 310 | 25 | 363 | 5.59e-44 | 155 |
| MS.gene060245.t1 | AT4G10950 | 28.571 | 315 | 184 | 6 | 31 | 310 | 69 | 377 | 1.01e-43 | 155 |
| MS.gene060245.t1 | AT1G75930 | 32.849 | 344 | 179 | 10 | 10 | 317 | 11 | 338 | 2.60e-43 | 152 |
| MS.gene060245.t1 | AT3G43550 | 33.712 | 264 | 136 | 5 | 31 | 260 | 28 | 286 | 4.52e-43 | 150 |
| MS.gene060245.t1 | AT1G29660 | 32.099 | 324 | 178 | 8 | 25 | 311 | 24 | 342 | 7.03e-43 | 152 |
| MS.gene060245.t1 | AT2G23540 | 31.339 | 351 | 197 | 9 | 5 | 313 | 20 | 368 | 1.60e-42 | 151 |
| MS.gene060245.t1 | AT3G50400 | 31.519 | 349 | 192 | 11 | 5 | 310 | 8 | 352 | 1.82e-41 | 148 |
| MS.gene060245.t1 | AT5G41890 | 31.595 | 326 | 174 | 9 | 35 | 313 | 33 | 356 | 5.92e-41 | 147 |
| MS.gene060245.t1 | AT1G29670 | 30.205 | 341 | 192 | 9 | 8 | 311 | 10 | 341 | 1.98e-40 | 145 |
| MS.gene060245.t1 | AT1G75920 | 31.164 | 292 | 157 | 6 | 55 | 311 | 22 | 304 | 3.10e-40 | 144 |
| MS.gene060245.t1 | AT1G71250 | 27.554 | 323 | 189 | 7 | 28 | 311 | 36 | 352 | 4.01e-40 | 145 |
| MS.gene060245.t1 | AT1G53920 | 30.484 | 351 | 193 | 11 | 7 | 313 | 18 | 361 | 4.50e-40 | 145 |
| MS.gene060245.t1 | AT1G29670 | 30.205 | 341 | 192 | 9 | 8 | 311 | 78 | 409 | 8.36e-40 | 145 |
| MS.gene060245.t1 | AT5G45670 | 29.240 | 342 | 194 | 9 | 8 | 311 | 9 | 340 | 3.02e-39 | 142 |
| MS.gene060245.t1 | AT5G37690 | 25.723 | 311 | 196 | 5 | 36 | 313 | 30 | 338 | 7.43e-39 | 141 |
| MS.gene060245.t1 | AT4G18970 | 30.794 | 315 | 175 | 9 | 35 | 311 | 30 | 339 | 3.00e-38 | 139 |
| MS.gene060245.t1 | AT4G18970 | 30.794 | 315 | 175 | 9 | 35 | 311 | 30 | 339 | 4.89e-38 | 140 |
| MS.gene060245.t1 | AT5G15720 | 29.653 | 317 | 180 | 7 | 33 | 310 | 30 | 342 | 5.25e-38 | 139 |
| MS.gene060245.t1 | AT5G55050 | 33.231 | 325 | 168 | 11 | 30 | 309 | 33 | 353 | 3.06e-37 | 137 |
| MS.gene060245.t1 | AT1G75920 | 30.255 | 314 | 143 | 8 | 33 | 311 | 29 | 301 | 8.90e-37 | 134 |
| MS.gene060245.t1 | AT1G74460 | 28.354 | 328 | 190 | 10 | 35 | 325 | 25 | 344 | 9.03e-36 | 133 |
| MS.gene060245.t1 | AT1G33811 | 30.395 | 329 | 177 | 12 | 28 | 311 | 29 | 350 | 9.53e-36 | 133 |
| MS.gene060245.t1 | AT5G37690 | 25.641 | 312 | 187 | 6 | 36 | 313 | 30 | 330 | 1.51e-35 | 132 |
| MS.gene060245.t1 | AT5G40990 | 28.451 | 355 | 201 | 8 | 4 | 313 | 8 | 354 | 3.33e-35 | 132 |
| MS.gene060245.t1 | AT5G33370 | 32.700 | 263 | 140 | 5 | 33 | 260 | 30 | 290 | 3.69e-35 | 130 |
| MS.gene060245.t1 | AT1G53990 | 29.429 | 350 | 195 | 10 | 5 | 313 | 7 | 345 | 7.04e-34 | 128 |
| MS.gene060245.t1 | AT2G19060 | 29.022 | 317 | 168 | 11 | 35 | 311 | 32 | 331 | 3.74e-33 | 125 |
| MS.gene060245.t1 | AT2G19010 | 31.861 | 317 | 157 | 12 | 35 | 311 | 32 | 329 | 9.49e-33 | 124 |
| MS.gene060245.t1 | AT2G19010 | 31.861 | 317 | 157 | 12 | 35 | 311 | 62 | 359 | 1.47e-32 | 124 |
| MS.gene060245.t1 | AT1G71691 | 29.430 | 316 | 182 | 10 | 31 | 311 | 53 | 362 | 3.98e-32 | 124 |
| MS.gene060245.t1 | AT1G28650 | 30.168 | 358 | 191 | 16 | 5 | 311 | 12 | 361 | 2.38e-31 | 121 |
| MS.gene060245.t1 | AT1G53940 | 29.050 | 358 | 194 | 10 | 7 | 313 | 8 | 356 | 2.89e-31 | 121 |
| MS.gene060245.t1 | AT3G14225 | 26.744 | 344 | 201 | 9 | 15 | 313 | 21 | 358 | 5.71e-31 | 120 |
| MS.gene060245.t1 | AT2G19050 | 28.483 | 323 | 176 | 11 | 27 | 311 | 25 | 330 | 1.63e-30 | 119 |
| MS.gene060245.t1 | AT3G14225 | 27.059 | 340 | 201 | 9 | 15 | 313 | 21 | 354 | 1.78e-30 | 119 |
| MS.gene060245.t1 | AT4G16230 | 35.789 | 190 | 118 | 3 | 30 | 218 | 27 | 213 | 1.36e-28 | 111 |
| MS.gene060245.t1 | AT1G28580 | 29.888 | 358 | 188 | 16 | 9 | 313 | 16 | 363 | 3.91e-28 | 113 |
| MS.gene060245.t1 | AT1G28640 | 27.577 | 359 | 199 | 15 | 7 | 313 | 12 | 361 | 5.12e-28 | 112 |
| MS.gene060245.t1 | AT3G48460 | 27.119 | 354 | 205 | 14 | 2 | 310 | 12 | 357 | 3.43e-27 | 110 |
| MS.gene060245.t1 | AT1G28670 | 27.855 | 359 | 199 | 13 | 7 | 313 | 12 | 362 | 7.12e-27 | 109 |
| MS.gene060245.t1 | AT1G28610 | 30.564 | 337 | 165 | 17 | 31 | 310 | 29 | 353 | 1.09e-26 | 108 |
| MS.gene060245.t1 | AT1G71120 | 26.687 | 326 | 187 | 9 | 26 | 311 | 24 | 337 | 3.52e-26 | 107 |
| MS.gene060245.t1 | AT1G28570 | 28.969 | 359 | 193 | 16 | 7 | 313 | 12 | 360 | 1.90e-25 | 105 |
| MS.gene060245.t1 | AT1G28660 | 26.593 | 361 | 199 | 16 | 7 | 313 | 12 | 360 | 9.68e-25 | 103 |
| MS.gene060245.t1 | AT1G28660 | 26.519 | 362 | 199 | 16 | 7 | 313 | 12 | 361 | 1.23e-24 | 103 |
| MS.gene060245.t1 | AT1G28600 | 28.613 | 346 | 190 | 14 | 33 | 327 | 31 | 370 | 1.42e-24 | 103 |
| MS.gene060245.t1 | AT4G30140 | 29.393 | 313 | 168 | 12 | 35 | 311 | 35 | 330 | 1.18e-23 | 100 |
| MS.gene060245.t1 | AT1G31550 | 27.964 | 329 | 180 | 14 | 33 | 310 | 36 | 358 | 1.43e-22 | 97.4 |
| MS.gene060245.t1 | AT2G27360 | 27.795 | 331 | 182 | 14 | 33 | 311 | 33 | 358 | 2.03e-22 | 97.1 |
| MS.gene060245.t1 | AT1G56670 | 28.198 | 344 | 186 | 14 | 34 | 328 | 41 | 372 | 2.96e-22 | 96.3 |
| MS.gene060245.t1 | AT2G03980 | 27.139 | 339 | 195 | 15 | 16 | 310 | 21 | 351 | 4.37e-22 | 95.9 |
| MS.gene060245.t1 | AT2G03980 | 27.139 | 339 | 195 | 15 | 16 | 310 | 21 | 351 | 4.37e-22 | 95.9 |
| MS.gene060245.t1 | AT2G03980 | 27.139 | 339 | 195 | 15 | 16 | 310 | 21 | 351 | 4.37e-22 | 95.9 |
| MS.gene060245.t1 | AT2G03980 | 27.139 | 339 | 195 | 15 | 16 | 310 | 21 | 351 | 4.37e-22 | 95.9 |
| MS.gene060245.t1 | AT1G28590 | 27.457 | 346 | 191 | 17 | 19 | 311 | 22 | 360 | 1.75e-21 | 94.7 |
| MS.gene060245.t1 | AT5G15720 | 27.341 | 267 | 151 | 7 | 33 | 260 | 30 | 292 | 3.77e-21 | 92.4 |
| MS.gene060245.t1 | AT3G05180 | 24.929 | 353 | 204 | 9 | 15 | 313 | 20 | 365 | 9.70e-21 | 92.4 |
| MS.gene060245.t1 | AT4G01130 | 26.496 | 351 | 178 | 12 | 28 | 313 | 29 | 364 | 2.00e-20 | 91.3 |
| MS.gene060245.t1 | AT2G04020 | 30.142 | 282 | 164 | 13 | 36 | 306 | 46 | 305 | 3.07e-20 | 90.1 |
| MS.gene060245.t1 | AT1G53940 | 28.990 | 307 | 160 | 10 | 8 | 269 | 9 | 302 | 3.39e-20 | 89.7 |
| MS.gene060245.t1 | AT1G09390 | 26.146 | 371 | 208 | 15 | 5 | 327 | 16 | 368 | 6.34e-20 | 89.7 |
| MS.gene060245.t1 | AT5G03610 | 26.282 | 312 | 175 | 9 | 32 | 303 | 42 | 338 | 1.57e-19 | 88.6 |
| MS.gene060245.t1 | AT1G54790 | 25.369 | 339 | 192 | 11 | 30 | 313 | 29 | 361 | 1.71e-19 | 88.6 |
| MS.gene060245.t1 | AT2G04020 | 35.227 | 176 | 102 | 8 | 33 | 204 | 43 | 210 | 2.14e-19 | 86.7 |
| MS.gene060245.t1 | AT5G15720 | 24.314 | 255 | 154 | 4 | 95 | 310 | 57 | 311 | 5.92e-19 | 86.7 |
| MS.gene060245.t1 | AT1G31550 | 26.829 | 328 | 182 | 14 | 33 | 310 | 36 | 355 | 8.84e-19 | 86.7 |
| MS.gene060245.t1 | AT2G19050 | 36.774 | 155 | 87 | 5 | 27 | 180 | 25 | 169 | 1.07e-18 | 85.1 |
| MS.gene060245.t1 | AT3G09930 | 25.796 | 314 | 183 | 9 | 28 | 303 | 34 | 335 | 1.21e-18 | 85.9 |
| MS.gene060245.t1 | AT3G09930 | 25.796 | 314 | 183 | 9 | 28 | 303 | 34 | 335 | 1.21e-18 | 85.9 |
| MS.gene060245.t1 | AT1G71691 | 34.884 | 172 | 102 | 8 | 31 | 198 | 53 | 218 | 3.37e-18 | 84.0 |
| MS.gene060245.t1 | AT3G14220 | 24.843 | 318 | 179 | 13 | 34 | 310 | 33 | 331 | 3.64e-18 | 84.7 |
| MS.gene060245.t1 | AT1G71691 | 25.103 | 243 | 146 | 6 | 104 | 311 | 20 | 261 | 4.58e-16 | 77.8 |
| MS.gene060245.t1 | AT4G16220 | 45.349 | 86 | 44 | 2 | 35 | 120 | 32 | 114 | 3.21e-15 | 74.7 |
| MS.gene060245.t1 | AT1G54790 | 23.978 | 367 | 203 | 14 | 7 | 313 | 10 | 360 | 6.40e-15 | 75.5 |
| MS.gene060245.t1 | AT1G54000 | 23.899 | 318 | 190 | 10 | 33 | 313 | 36 | 338 | 1.28e-14 | 74.3 |
| MS.gene060245.t1 | AT4G16233 | 37.383 | 107 | 64 | 2 | 207 | 311 | 4 | 109 | 2.21e-14 | 69.7 |
| MS.gene060245.t1 | AT1G54020 | 22.257 | 319 | 187 | 8 | 34 | 313 | 34 | 330 | 2.33e-14 | 73.6 |
| MS.gene060245.t1 | AT1G28610 | 34.756 | 164 | 83 | 9 | 31 | 180 | 29 | 182 | 9.30e-14 | 70.5 |
| MS.gene060245.t1 | AT4G01130 | 26.016 | 246 | 126 | 7 | 119 | 313 | 38 | 278 | 1.79e-13 | 70.5 |
| MS.gene060245.t1 | AT1G28580 | 26.690 | 281 | 149 | 13 | 84 | 313 | 8 | 282 | 1.88e-12 | 67.4 |
Find 53 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGCTTCAAAATATGTATTT+TGG | 0.097246 | 5.4:+59981318 | MS.gene060245:CDS |
| GCTCTTCATTTGATAGATTT+TGG | 0.136586 | 5.4:-59978371 | None:intergenic |
| ATTTACAATTCCTGTGAAAT+TGG | 0.160122 | 5.4:-59981415 | None:intergenic |
| AAGGGAAATCATTTACCTTA+TGG | 0.222399 | 5.4:+59978237 | MS.gene060245:CDS |
| AGAAACCATCCCTCCTTTCT+TGG | 0.233482 | 5.4:+59978347 | MS.gene060245:CDS |
| CAATTACAAGCAATTATTTC+AGG | 0.267672 | 5.4:+59979499 | MS.gene060245:CDS |
| TAGATTCTCTAATGGAAAAT+TGG | 0.269668 | 5.4:+59978290 | MS.gene060245:CDS |
| AGCTTTGCATCTGGAGGATC+TGG | 0.329846 | 5.4:+59978408 | MS.gene060245:CDS |
| TTTCAAAGATTATGTGGATA+AGG | 0.351799 | 5.4:+59978491 | MS.gene060245:CDS |
| GTATTTAGCAATATACTTGT+TGG | 0.359467 | 5.4:-59981366 | None:intergenic |
| TTTATGACATTCCAACTAGA+AGG | 0.365042 | 5.4:+59978607 | MS.gene060245:CDS |
| GTCTACTTTGAACAAAATCT+TGG | 0.366064 | 5.4:-59978653 | None:intergenic |
| AACGTGCATTAAAATGATAA+AGG | 0.377938 | 5.4:-59978088 | None:intergenic |
| GATAAGGTTAAAAGCATTGT+AGG | 0.384357 | 5.4:+59978507 | MS.gene060245:CDS |
| TATTGCTAAATACATAGAAT+TGG | 0.401057 | 5.4:+59981376 | MS.gene060245:CDS |
| GGAAGAGAATTTAGAGGCTA+AGG | 0.403545 | 5.4:+59979444 | MS.gene060245:CDS |
| AAGGAGGGATGGTTTCTTTG+AGG | 0.411318 | 5.4:-59978341 | None:intergenic |
| ACAAAGACTTGGAAATGCTT+TGG | 0.415209 | 5.4:+59978545 | MS.gene060245:CDS |
| AACATATATGACCCCTTGAT+TGG | 0.416640 | 5.4:+59979541 | MS.gene060245:CDS |
| TGAATATTTCAAAGATTATG+TGG | 0.419935 | 5.4:+59978485 | MS.gene060245:CDS |
| AACAAAGGATGTTGTGGAAC+TGG | 0.421733 | 5.4:+59981245 | MS.gene060245:CDS |
| CTACCAGTAGGTACATGATT+AGG | 0.426812 | 5.4:-59978270 | None:intergenic |
| AGGTTGGAGTTCAACATTAG+TGG | 0.428216 | 5.4:+59978627 | MS.gene060245:CDS |
| TACTTGTTGGTTGCTTCACT+TGG | 0.432363 | 5.4:-59981353 | None:intergenic |
| TGTGAAGGAAGAGAATTTAG+AGG | 0.433278 | 5.4:+59979438 | MS.gene060245:CDS |
| TCAAATGAAGAGCTTCTAAC+TGG | 0.435781 | 5.4:+59978381 | MS.gene060245:CDS |
| ACTGGTGTTAGCTTTGCATC+TGG | 0.440820 | 5.4:+59978399 | MS.gene060245:CDS |
| TTGAACTCCAACCTTCTAGT+TGG | 0.447228 | 5.4:-59978618 | None:intergenic |
| ACGTGCATTAAAATGATAAA+GGG | 0.453829 | 5.4:-59978087 | None:intergenic |
| CCTACTGGTAGATTCTCTAA+TGG | 0.455682 | 5.4:+59978282 | MS.gene060245:CDS |
| ATTCCTGTGAAATTGGAACT+TGG | 0.457316 | 5.4:-59981408 | None:intergenic |
| TACCCAAGTTCCAATTTCAC+AGG | 0.488485 | 5.4:+59981405 | MS.gene060245:CDS |
| TTTCCTAATCATGTACCTAC+TGG | 0.490307 | 5.4:+59978267 | MS.gene060245:CDS |
| TTTGAAGCGTCATCACATAC+AGG | 0.490836 | 5.4:-59981305 | None:intergenic |
| GTGTTTGATAAGGCCAATCA+AGG | 0.492502 | 5.4:-59979554 | None:intergenic |
| TGACATTCCAACTAGAAGGT+TGG | 0.501212 | 5.4:+59978611 | MS.gene060245:CDS |
| ATAAGGTTAAAAGCATTGTA+GGG | 0.513100 | 5.4:+59978508 | MS.gene060245:CDS |
| TTCCTGTGAAATTGGAACTT+GGG | 0.516173 | 5.4:-59981407 | None:intergenic |
| GTCATTGCTTGAAGCAACAT+TGG | 0.522506 | 5.4:-59978121 | None:intergenic |
| GAAACAAACAAAGGATGTTG+TGG | 0.546639 | 5.4:+59981239 | MS.gene060245:CDS |
| CCATTAGAGAATCTACCAGT+AGG | 0.562970 | 5.4:-59978282 | None:intergenic |
| TTGGTCCAAGAAAGGAGGGA+TGG | 0.578985 | 5.4:-59978352 | None:intergenic |
| AAAGAAGCTAAACAAAGACT+TGG | 0.581761 | 5.4:+59978534 | MS.gene060245:CDS |
| GCTTTGGTGATCATTAGCGC+TGG | 0.588385 | 5.4:+59978561 | MS.gene060245:CDS |
| TGTTTGATAAGGCCAATCAA+GGG | 0.589287 | 5.4:-59979553 | None:intergenic |
| GGTGTTAGCTTTGCATCTGG+AGG | 0.607335 | 5.4:+59978402 | MS.gene060245:CDS |
| GGGGATTCTACAGTTGACAC+AGG | 0.624344 | 5.4:+59978183 | MS.gene060245:CDS |
| GCTTGAAGCAACATTGGCAA+TGG | 0.626046 | 5.4:-59978115 | None:intergenic |
| AGATCGTTATAAATGTGTGA+AGG | 0.626968 | 5.4:+59979423 | MS.gene060245:CDS |
| TAAGGTTAAAAGCATTGTAG+GGG | 0.636849 | 5.4:+59978509 | MS.gene060245:CDS |
| GTTTGATAAGGCCAATCAAG+GGG | 0.665387 | 5.4:-59979552 | None:intergenic |
| GGTTTCAAGGAAACAAACAA+AGG | 0.717933 | 5.4:+59981230 | MS.gene060245:intron |
| GGTGTGAGTTCATTACACAA+TGG | 0.719328 | 5.4:-59981284 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTTCTTAAAAAATTGT+AGG | + | chr5.4:59979309-59979328 | MS.gene060245:intron | 10.0% |
| !!! | ATTAGAATTATTTTCTTTTT+TGG | + | chr5.4:59978702-59978721 | MS.gene060245:intron | 10.0% |
| !!! | TATTTTTTTTTTCAAAAACA+AGG | - | chr5.4:59980730-59980749 | None:intergenic | 10.0% |
| !!! | TGAACTTTATATTTATTTTT+TGG | - | chr5.4:59980446-59980427 | None:intergenic | 10.0% |
| !! | AAAAGAGTTTAATAAATTGT+TGG | - | chr5.4:59978838-59978857 | None:intergenic | 15.0% |
| !! | AATGCATAAATAAATACTAT+AGG | - | chr5.4:59981190-59981209 | None:intergenic | 15.0% |
| !! | ATCAAAAAAACATTGATAAA+GGG | + | chr5.4:59978219-59978238 | MS.gene060245:CDS | 15.0% |
| !! | CAATCATATATATTTAATCA+AGG | + | chr5.4:59979033-59979052 | MS.gene060245:intron | 15.0% |
| !!! | AAAACATTTTTTTATTCTGA+CGG | + | chr5.4:59979151-59979170 | MS.gene060245:intron | 15.0% |
| !!! | TTTTATACAAATCTTCTTTT+TGG | + | chr5.4:59978892-59978911 | MS.gene060245:intron | 15.0% |
| !!! | TTTTTTTTTTGACAAGTAAT+GGG | + | chr5.4:59980105-59980124 | MS.gene060245:intron | 15.0% |
| !!! | TTTTTTTTTTTGACAAGTAA+TGG | + | chr5.4:59980104-59980123 | MS.gene060245:intron | 15.0% |
| !! | AAGGAATAATGAAATGAAAA+AGG | + | chr5.4:59980521-59980540 | MS.gene060245:intron | 20.0% |
| !! | CAACAGAGATAAAATTTAAT+GGG | + | chr5.4:59980075-59980094 | MS.gene060245:intron | 20.0% |
| !! | CATCAAAAAAACATTGATAA+AGG | + | chr5.4:59978218-59978237 | MS.gene060245:CDS | 20.0% |
| !! | TAAAATATGATTATCTACTG+TGG | + | chr5.4:59980346-59980365 | MS.gene060245:intron | 20.0% |
| !! | TAACAGAAAAAATGAAGTTA+AGG | + | chr5.4:59980463-59980482 | MS.gene060245:intron | 20.0% |
| !! | TATTGCTAAATACATAGAAT+TGG | + | chr5.4:59981376-59981395 | MS.gene060245:CDS | 20.0% |
| !! | TGAATATTTCAAAGATTATG+TGG | + | chr5.4:59978485-59978504 | MS.gene060245:CDS | 20.0% |
| !! | TTGACAAATTGAACATAAAA+GGG | - | chr5.4:59979629-59979648 | None:intergenic | 20.0% |
| !! | TTTGACAAATTGAACATAAA+AGG | - | chr5.4:59979630-59979649 | None:intergenic | 20.0% |
| !!! | AAAAAAATCTGAAACAAATG+GGG | + | chr5.4:59980895-59980914 | MS.gene060245:intron | 20.0% |
| !!! | GAAAAAAATCTGAAACAAAT+GGG | + | chr5.4:59980894-59980913 | MS.gene060245:intron | 20.0% |
| !!! | TAAGTAACTTTTTTCTAATG+TGG | + | chr5.4:59979689-59979708 | MS.gene060245:intron | 20.0% |
| !!! | TAGACTTCAAATTTTCATTA+AGG | + | chr5.4:59978671-59978690 | MS.gene060245:intron | 20.0% |
| !!! | TCATTTTTAAGTGTTTGTTT+AGG | - | chr5.4:59980837-59980856 | None:intergenic | 20.0% |
| !!! | TGAAAAAAATCTGAAACAAA+TGG | + | chr5.4:59980893-59980912 | MS.gene060245:intron | 20.0% |
| !!! | TTCACCTTTAAAATTTTGAA+GGG | - | chr5.4:59981156-59981175 | None:intergenic | 20.0% |
| !!! | TTTTCATTACCAAGAAATAT+AGG | - | chr5.4:59980921-59980940 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTCAAAAACAAGG+AGG | - | chr5.4:59980727-59980746 | None:intergenic | 20.0% |
| ! | AAAAAATGAAGTTAAGGCTT+TGG | + | chr5.4:59980469-59980488 | MS.gene060245:intron | 25.0% |
| ! | AACGTGCATTAAAATGATAA+AGG | - | chr5.4:59978091-59978110 | None:intergenic | 25.0% |
| ! | AATGTCAAGAGAAAATACAA+CGG | - | chr5.4:59980020-59980039 | None:intergenic | 25.0% |
| ! | ACAAATGCATAAAATATGCA+AGG | - | chr5.4:59978968-59978987 | None:intergenic | 25.0% |
| ! | ACATCTATCTTAGAAATAGA+GGG | - | chr5.4:59979945-59979964 | None:intergenic | 25.0% |
| ! | ACGTGCATTAAAATGATAAA+GGG | - | chr5.4:59978090-59978109 | None:intergenic | 25.0% |
| ! | AGAAAACTATCTCTCAAATA+AGG | + | chr5.4:59981068-59981087 | MS.gene060245:intron | 25.0% |
| ! | AGAGTTTAATAAATTGTTGG+TGG | - | chr5.4:59978835-59978854 | None:intergenic | 25.0% |
| ! | ATTTACAATTCCTGTGAAAT+TGG | - | chr5.4:59981418-59981437 | None:intergenic | 25.0% |
| ! | CAATTACAAGCAATTATTTC+AGG | + | chr5.4:59979499-59979518 | MS.gene060245:CDS | 25.0% |
| ! | CCAACAGAGATAAAATTTAA+TGG | + | chr5.4:59980074-59980093 | MS.gene060245:intron | 25.0% |
| ! | GGTAATTGCTAAAGAAAAAT+TGG | + | chr5.4:59980051-59980070 | MS.gene060245:intron | 25.0% |
| ! | GTATTTAGCAATATACTTGT+TGG | - | chr5.4:59981369-59981388 | None:intergenic | 25.0% |
| ! | TAAGGATTACAACCAAAAAT+TGG | + | chr5.4:59979462-59979481 | MS.gene060245:CDS | 25.0% |
| ! | TACATCTATCTTAGAAATAG+AGG | - | chr5.4:59979946-59979965 | None:intergenic | 25.0% |
| ! | TACTATCAGACACTAAATAT+AGG | - | chr5.4:59980324-59980343 | None:intergenic | 25.0% |
| ! | TAGATTCTCTAATGGAAAAT+TGG | + | chr5.4:59978290-59978309 | MS.gene060245:CDS | 25.0% |
| ! | TCTTGACATTGAATTGATAA+TGG | + | chr5.4:59980030-59980049 | MS.gene060245:intron | 25.0% |
| ! | TTTCAAAGATTATGTGGATA+AGG | + | chr5.4:59978491-59978510 | MS.gene060245:CDS | 25.0% |
| !! | ACGCTTCAAAATATGTATTT+TGG | + | chr5.4:59981318-59981337 | MS.gene060245:CDS | 25.0% |
| !! | AGAGAAAAGAGAGAAATTTT+CGG | - | chr5.4:59981094-59981113 | None:intergenic | 25.0% |
| !! | ATAACGATCTTTTACAAACT+TGG | - | chr5.4:59979413-59979432 | None:intergenic | 25.0% |
| !! | CCATTAAATTTTATCTCTGT+TGG | - | chr5.4:59980077-59980096 | None:intergenic | 25.0% |
| !! | CCTAATAGCTTTTCATTTTA+GGG | + | chr5.4:59980769-59980788 | MS.gene060245:intron | 25.0% |
| !! | CGCTTCAAAATATGTATTTT+GGG | + | chr5.4:59981319-59981338 | MS.gene060245:CDS | 25.0% |
| !! | CTTTCCCTTCAAAATTTTAA+AGG | + | chr5.4:59981149-59981168 | MS.gene060245:intron | 25.0% |
| !! | CTTTTATTATACAGGTTTCA+AGG | + | chr5.4:59981217-59981236 | MS.gene060245:intron | 25.0% |
| !! | TATACAAATCTTCTTTTTGG+TGG | + | chr5.4:59978895-59978914 | MS.gene060245:intron | 25.0% |
| !! | TCCTAATAGCTTTTCATTTT+AGG | + | chr5.4:59980768-59980787 | MS.gene060245:intron | 25.0% |
| !! | TCTTGTGACTTTTATTATAC+AGG | + | chr5.4:59981209-59981228 | MS.gene060245:intron | 25.0% |
| !! | TTAGGAAAATCTTTTCCATA+AGG | - | chr5.4:59978255-59978274 | None:intergenic | 25.0% |
| !!! | AAATTTTGAAGGGAAAGAAA+AGG | - | chr5.4:59981146-59981165 | None:intergenic | 25.0% |
| !!! | AATGGATTTTTATGCATTGT+AGG | - | chr5.4:59980664-59980683 | None:intergenic | 25.0% |
| !!! | AATTTTGAAGGGAAAGAAAA+GGG | - | chr5.4:59981145-59981164 | None:intergenic | 25.0% |
| !!! | AGAATGAAGCTTTAAGAATA+AGG | + | chr5.4:59980502-59980521 | MS.gene060245:intron | 25.0% |
| !!! | ATAAGGTTAAAAGCATTGTA+GGG | + | chr5.4:59978508-59978527 | MS.gene060245:CDS | 25.0% |
| !!! | GATTTTACAATAGCTTTAAC+TGG | + | chr5.4:59978438-59978457 | MS.gene060245:CDS | 25.0% |
| !!! | GTTCACCTTTAAAATTTTGA+AGG | - | chr5.4:59981157-59981176 | None:intergenic | 25.0% |
| !!! | TGTCATCCATTTTAGTTTTT+GGG | + | chr5.4:59978163-59978182 | MS.gene060245:CDS | 25.0% |
| !!! | TTGTCATCCATTTTAGTTTT+TGG | + | chr5.4:59978162-59978181 | MS.gene060245:CDS | 25.0% |
| AAAAGGGAAAGGAAATACTT+TGG | - | chr5.4:59981129-59981148 | None:intergenic | 30.0% | |
| AAAGAAGCTAAACAAAGACT+TGG | + | chr5.4:59978534-59978553 | MS.gene060245:CDS | 30.0% | |
| AAGGGAAATCATTTACCTTA+TGG | + | chr5.4:59978237-59978256 | MS.gene060245:CDS | 30.0% | |
| AGAATCCCCAAAAACTAAAA+TGG | - | chr5.4:59978172-59978191 | None:intergenic | 30.0% | |
| AGATCGTTATAAATGTGTGA+AGG | + | chr5.4:59979423-59979442 | MS.gene060245:CDS | 30.0% | |
| ATCAAACACCCTGAAAAATA+TGG | + | chr5.4:59979568-59979587 | MS.gene060245:CDS | 30.0% | |
| ATGAAATGAAAAAGGAAGCA+AGG | + | chr5.4:59980529-59980548 | MS.gene060245:intron | 30.0% | |
| CCCTAAAATGAAAAGCTATT+AGG | - | chr5.4:59980772-59980791 | None:intergenic | 30.0% | |
| GTCTACTTTGAACAAAATCT+TGG | - | chr5.4:59978656-59978675 | None:intergenic | 30.0% | |
| TGAAATGAAAAAGGAAGCAA+GGG | + | chr5.4:59980530-59980549 | MS.gene060245:intron | 30.0% | |
| TTGATTGATATAGCATAGCT+TGG | - | chr5.4:59979661-59979680 | None:intergenic | 30.0% | |
| TTTATGACATTCCAACTAGA+AGG | + | chr5.4:59978607-59978626 | MS.gene060245:CDS | 30.0% | |
| ! | AACTTGGCTGTTATTTGAAT+AGG | - | chr5.4:59979397-59979416 | None:intergenic | 30.0% |
| ! | GCTCTTCATTTGATAGATTT+TGG | - | chr5.4:59978374-59978393 | None:intergenic | 30.0% |
| !! | CATTTTGACCATCTCTATTT+CGG | + | chr5.4:59979732-59979751 | MS.gene060245:intron | 30.0% |
| !! | GATAAGGTTAAAAGCATTGT+AGG | + | chr5.4:59978507-59978526 | MS.gene060245:CDS | 30.0% |
| !! | TAAGGTTAAAAGCATTGTAG+GGG | + | chr5.4:59978509-59978528 | MS.gene060245:CDS | 30.0% |
| !!! | AGAGATAGTTTTCTAGAGTA+TGG | - | chr5.4:59981062-59981081 | None:intergenic | 30.0% |
| !!! | ATTTTTCAGGGTGTTTGATA+AGG | - | chr5.4:59979567-59979586 | None:intergenic | 30.0% |
| !!! | GTCATCCATTTTAGTTTTTG+GGG | + | chr5.4:59978164-59978183 | MS.gene060245:CDS | 30.0% |
| AACATATATGACCCCTTGAT+TGG | + | chr5.4:59979541-59979560 | MS.gene060245:CDS | 35.0% | |
| AACTTGAAAGGGAAGGTTAT+GGG | + | chr5.4:59980562-59980581 | MS.gene060245:intron | 35.0% | |
| ACAAAGACTTGGAAATGCTT+TGG | + | chr5.4:59978545-59978564 | MS.gene060245:CDS | 35.0% | |
| ATCCTATTCCGAAATAGAGA+TGG | - | chr5.4:59979743-59979762 | None:intergenic | 35.0% | |
| ATTCCTGTGAAATTGGAACT+TGG | - | chr5.4:59981411-59981430 | None:intergenic | 35.0% | |
| CAAAAAGATAAAGCTCAACC+AGG | + | chr5.4:59980249-59980268 | MS.gene060245:intron | 35.0% | |
| CATAAAATATGCAAGGTCCA+GGG | - | chr5.4:59978961-59978980 | None:intergenic | 35.0% | |
| CGAAATAGAGATGGTCAAAA+TGG | - | chr5.4:59979734-59979753 | None:intergenic | 35.0% | |
| CTACTGTGGAAAGAACTTAT+AGG | + | chr5.4:59980360-59980379 | MS.gene060245:intron | 35.0% | |
| GAAACAAACAAAGGATGTTG+TGG | + | chr5.4:59981239-59981258 | MS.gene060245:CDS | 35.0% | |
| GGTTTCAAGGAAACAAACAA+AGG | + | chr5.4:59981230-59981249 | MS.gene060245:intron | 35.0% | |
| TCAAATGAAGAGCTTCTAAC+TGG | + | chr5.4:59978381-59978400 | MS.gene060245:CDS | 35.0% | |
| TGAATAGGTATGCAACCAAT+AGG | - | chr5.4:59979382-59979401 | None:intergenic | 35.0% | |
| TGTGAAGGAAGAGAATTTAG+AGG | + | chr5.4:59979438-59979457 | MS.gene060245:CDS | 35.0% | |
| TGTTTGATAAGGCCAATCAA+GGG | - | chr5.4:59979556-59979575 | None:intergenic | 35.0% | |
| TTCCTGTGAAATTGGAACTT+GGG | - | chr5.4:59981410-59981429 | None:intergenic | 35.0% | |
| TTTCCTAATCATGTACCTAC+TGG | + | chr5.4:59978267-59978286 | MS.gene060245:CDS | 35.0% | |
| ! | ACAAGTAATGGGAGAGTTAA+TGG | + | chr5.4:59980116-59980135 | MS.gene060245:intron | 35.0% |
| ! | CAAGTAATGGGAGAGTTAAT+GGG | + | chr5.4:59980117-59980136 | MS.gene060245:intron | 35.0% |
| ! | GCAACTCACCATATTTTTCA+GGG | - | chr5.4:59979579-59979598 | None:intergenic | 35.0% |
| ! | TGCAACTCACCATATTTTTC+AGG | - | chr5.4:59979580-59979599 | None:intergenic | 35.0% |
| !! | ACAAATCTTCTTTTTGGTGG+TGG | + | chr5.4:59978898-59978917 | MS.gene060245:intron | 35.0% |
| !! | GATAGATTTTGGTCCAAGAA+AGG | - | chr5.4:59978363-59978382 | None:intergenic | 35.0% |
| !! | GGTTGAGCTTTATCTTTTTG+TGG | - | chr5.4:59980249-59980268 | None:intergenic | 35.0% |
| AACAAAGGATGTTGTGGAAC+TGG | + | chr5.4:59981245-59981264 | MS.gene060245:CDS | 40.0% | |
| AGGATTGAGTCTACTAGAAG+AGG | + | chr5.4:59980269-59980288 | MS.gene060245:intron | 40.0% | |
| AGGGAAAGGAAATACTTTGG+AGG | - | chr5.4:59981126-59981145 | None:intergenic | 40.0% | |
| AGGTTGGAGTTCAACATTAG+TGG | + | chr5.4:59978627-59978646 | MS.gene060245:CDS | 40.0% | |
| ATAGGTATGCAACCAATAGG+AGG | - | chr5.4:59979379-59979398 | None:intergenic | 40.0% | |
| ATCTTAGAAATAGAGGGACC+AGG | - | chr5.4:59979939-59979958 | None:intergenic | 40.0% | |
| CAAATGGGGCCTATATTTCT+TGG | + | chr5.4:59980909-59980928 | MS.gene060245:intron | 40.0% | |
| CAACTTGAAAGGGAAGGTTA+TGG | + | chr5.4:59980561-59980580 | MS.gene060245:intron | 40.0% | |
| CCATTAGAGAATCTACCAGT+AGG | - | chr5.4:59978285-59978304 | None:intergenic | 40.0% | |
| CCTACTGGTAGATTCTCTAA+TGG | + | chr5.4:59978282-59978301 | MS.gene060245:CDS | 40.0% | |
| CCTCTGTCATCCAACTTAAT+CGG | - | chr5.4:59979808-59979827 | None:intergenic | 40.0% | |
| CTACCAGTAGGTACATGATT+AGG | - | chr5.4:59978273-59978292 | None:intergenic | 40.0% | |
| GACCATCTCTATTTCGGAAT+AGG | + | chr5.4:59979738-59979757 | MS.gene060245:intron | 40.0% | |
| GCATAAAATATGCAAGGTCC+AGG | - | chr5.4:59978962-59978981 | None:intergenic | 40.0% | |
| GCCATTCATCTTAGATCGAA+CGG | - | chr5.4:59979867-59979886 | None:intergenic | 40.0% | |
| GGAAGAGAATTTAGAGGCTA+AGG | + | chr5.4:59979444-59979463 | MS.gene060245:CDS | 40.0% | |
| GGATAGTCCTCAACTTGAAA+GGG | + | chr5.4:59980551-59980570 | MS.gene060245:intron | 40.0% | |
| GGGAAAGGAAATACTTTGGA+GGG | - | chr5.4:59981125-59981144 | None:intergenic | 40.0% | |
| GGTGTGAGTTCATTACACAA+TGG | - | chr5.4:59981287-59981306 | None:intergenic | 40.0% | |
| GTCATTGCTTGAAGCAACAT+TGG | - | chr5.4:59978124-59978143 | None:intergenic | 40.0% | |
| GTGTTTGATAAGGCCAATCA+AGG | - | chr5.4:59979557-59979576 | None:intergenic | 40.0% | |
| GTTTGATAAGGCCAATCAAG+GGG | - | chr5.4:59979555-59979574 | None:intergenic | 40.0% | |
| TACCCAAGTTCCAATTTCAC+AGG | + | chr5.4:59981405-59981424 | MS.gene060245:CDS | 40.0% | |
| TCTTCTAGTAGACTCAATCC+TGG | - | chr5.4:59980270-59980289 | None:intergenic | 40.0% | |
| TGAAGGGAAAGAAAAGGGAA+AGG | - | chr5.4:59981140-59981159 | None:intergenic | 40.0% | |
| TGACATTCCAACTAGAAGGT+TGG | + | chr5.4:59978611-59978630 | MS.gene060245:CDS | 40.0% | |
| TGTCATCCAACTTAATCGGA+CGG | - | chr5.4:59979804-59979823 | None:intergenic | 40.0% | |
| TTGAACTCCAACCTTCTAGT+TGG | - | chr5.4:59978621-59978640 | None:intergenic | 40.0% | |
| ! | ACCGTTCGATCTAAGATGAA+TGG | + | chr5.4:59979863-59979882 | MS.gene060245:intron | 40.0% |
| ! | AGTCTTATAGCGTGCAAATG+AGG | + | chr5.4:59980296-59980315 | MS.gene060245:intron | 40.0% |
| ! | ATGAAGTTAAGGCTTTGGCT+CGG | + | chr5.4:59980474-59980493 | MS.gene060245:intron | 40.0% |
| ! | GTAAACGTCGTGCCAATTTT+TGG | - | chr5.4:59979477-59979496 | None:intergenic | 40.0% |
| ! | TACTTGTTGGTTGCTTCACT+TGG | - | chr5.4:59981356-59981375 | None:intergenic | 40.0% |
| ! | TTTGAAGCGTCATCACATAC+AGG | - | chr5.4:59981308-59981327 | None:intergenic | 40.0% |
| !! | AGATTTTGGTCCAAGAAAGG+AGG | - | chr5.4:59978360-59978379 | None:intergenic | 40.0% |
| !! | GATTTTGGTCCAAGAAAGGA+GGG | - | chr5.4:59978359-59978378 | None:intergenic | 40.0% |
| !! | TAACCTTCCCTTTCAAGTTG+AGG | - | chr5.4:59980561-59980580 | None:intergenic | 40.0% |
| !!! | ATCTTCTTTTTGGTGGTGGT+CGG | + | chr5.4:59978902-59978921 | MS.gene060245:intron | 40.0% |
| AAGGAGGGATGGTTTCTTTG+AGG | - | chr5.4:59978344-59978363 | None:intergenic | 45.0% | |
| AGAAACCATCCCTCCTTTCT+TGG | + | chr5.4:59978347-59978366 | MS.gene060245:CDS | 45.0% | |
| AGTCCTCAACTTGAAAGGGA+AGG | + | chr5.4:59980555-59980574 | MS.gene060245:intron | 45.0% | |
| ATGGTCAAAATGGCTGCTAG+TGG | - | chr5.4:59979724-59979743 | None:intergenic | 45.0% | |
| GCTTGAAGCAACATTGGCAA+TGG | - | chr5.4:59978118-59978137 | None:intergenic | 45.0% | |
| GGGATAGTCCTCAACTTGAA+AGG | + | chr5.4:59980550-59980569 | MS.gene060245:intron | 45.0% | |
| TTGTAGGAACTGTACGAGCT+CGG | + | chr5.4:59979325-59979344 | MS.gene060245:intron | 45.0% | |
| ! | GTTTTTACAGCAGCAGAACC+TGG | + | chr5.4:59979918-59979937 | MS.gene060245:intron | 45.0% |
| ! | TTCGACCTTTTAGTGGTGGT+CGG | + | chr5.4:59978927-59978946 | MS.gene060245:intron | 45.0% |
| !! | ACTGGTGTTAGCTTTGCATC+TGG | + | chr5.4:59978399-59978418 | MS.gene060245:CDS | 45.0% |
| !! | CCGATTAAGTTGGATGACAG+AGG | + | chr5.4:59979805-59979824 | MS.gene060245:intron | 45.0% |
| !! | CGGATGCAGAAAATTTGCTG+TGG | + | chr5.4:59979345-59979364 | MS.gene060245:intron | 45.0% |
| !! | GCAGAAAATTTGCTGTGGCT+GGG | + | chr5.4:59979350-59979369 | MS.gene060245:intron | 45.0% |
| !! | TGCAGAAAATTTGCTGTGGC+TGG | + | chr5.4:59979349-59979368 | MS.gene060245:intron | 45.0% |
| !!! | TCTTCTTTTTGGTGGTGGTC+GGG | + | chr5.4:59978903-59978922 | MS.gene060245:intron | 45.0% |
| !! | TAATTTATAGAATATTATAA+AGG | - | chr5.4:59981010-59981029 | None:intergenic | 5.0% |
| !!! | AAAAAATGTTTTTTTTTTTT+AGG | - | chr5.4:59979143-59979162 | None:intergenic | 5.0% |
| !!! | AAAAATGTTTTTTTTTTTTA+GGG | - | chr5.4:59979142-59979161 | None:intergenic | 5.0% |
| !!! | CTTTTTTTTAAAAAAAAAAA+TGG | - | chr5.4:59980682-59980701 | None:intergenic | 5.0% |
| AGCTTTGCATCTGGAGGATC+TGG | + | chr5.4:59978408-59978427 | MS.gene060245:CDS | 50.0% | |
| GATTCCCTGCTGTAACAGCA+GGG | + | chr5.4:59979760-59979779 | MS.gene060245:intron | 50.0% | |
| GGGGATTCTACAGTTGACAC+AGG | + | chr5.4:59978183-59978202 | MS.gene060245:CDS | 50.0% | |
| TGACAGCCGTCCGATTAAGT+TGG | + | chr5.4:59979795-59979814 | MS.gene060245:intron | 50.0% | |
| TTGGTCCAAGAAAGGAGGGA+TGG | - | chr5.4:59978355-59978374 | None:intergenic | 50.0% | |
| ! | GCTTTGGTGATCATTAGCGC+TGG | + | chr5.4:59978561-59978580 | MS.gene060245:CDS | 50.0% |
| ! | TCGACCTTTTAGTGGTGGTC+GGG | + | chr5.4:59978928-59978947 | MS.gene060245:intron | 50.0% |
| ! | TGAGCTCAGCTCAGTTGGTA+GGG | - | chr5.4:59978991-59979010 | None:intergenic | 50.0% |
| !! | GGTGTTAGCTTTGCATCTGG+AGG | + | chr5.4:59978402-59978421 | MS.gene060245:CDS | 50.0% |
| !!! | CTTCTTTTTGGTGGTGGTCG+GGG | + | chr5.4:59978904-59978923 | MS.gene060245:intron | 50.0% |
| AGCACCCTGCTGTTACAGCA+GGG | - | chr5.4:59979767-59979786 | None:intergenic | 55.0% | |
| GAACCCCGACCACCACTAAA+AGG | - | chr5.4:59978935-59978954 | None:intergenic | 55.0% | |
| GGATTCCCTGCTGTAACAGC+AGG | + | chr5.4:59979759-59979778 | MS.gene060245:intron | 55.0% | |
| GTGAGCTCAGCTCAGTTGGT+AGG | - | chr5.4:59978992-59979011 | None:intergenic | 55.0% | |
| ! | CGACCTTTTAGTGGTGGTCG+GGG | + | chr5.4:59978929-59978948 | MS.gene060245:intron | 55.0% |
| ! | GGGGTTCGACCTTTTAGTGG+TGG | + | chr5.4:59978923-59978942 | MS.gene060245:intron | 55.0% |
| ! | GTCGGGGTTCGACCTTTTAG+TGG | + | chr5.4:59978920-59978939 | MS.gene060245:intron | 55.0% |
| CAGCACCCTGCTGTTACAGC+AGG | - | chr5.4:59979768-59979787 | None:intergenic | 60.0% | |
| CCAACTGAGCTGAGCTCACG+AGG | + | chr5.4:59978993-59979012 | MS.gene060245:intron | 60.0% | |
| CCTCGTGAGCTCAGCTCAGT+TGG | - | chr5.4:59978996-59979015 | None:intergenic | 60.0% | |
| GTGGCTGGGCTTCCTCCTAT+TGG | + | chr5.4:59979364-59979383 | MS.gene060245:intron | 60.0% | |
| GGTGGTCGGGGTTCGAACCC+TGG | + | chr5.4:59978941-59978960 | MS.gene060245:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 59978072 | 59981448 | 59978072 | ID=MS.gene060245 |
| chr5.4 | mRNA | 59978072 | 59981448 | 59978072 | ID=MS.gene060245.t1;Parent=MS.gene060245 |
| chr5.4 | exon | 59978072 | 59978669 | 59978072 | ID=MS.gene060245.t1.exon1;Parent=MS.gene060245.t1 |
| chr5.4 | CDS | 59978072 | 59978669 | 59978072 | ID=cds.MS.gene060245.t1;Parent=MS.gene060245.t1 |
| chr5.4 | exon | 59979410 | 59979589 | 59979410 | ID=MS.gene060245.t1.exon2;Parent=MS.gene060245.t1 |
| chr5.4 | CDS | 59979410 | 59979589 | 59979410 | ID=cds.MS.gene060245.t1;Parent=MS.gene060245.t1 |
| chr5.4 | exon | 59981231 | 59981448 | 59981231 | ID=MS.gene060245.t1.exon3;Parent=MS.gene060245.t1 |
| chr5.4 | CDS | 59981231 | 59981448 | 59981231 | ID=cds.MS.gene060245.t1;Parent=MS.gene060245.t1 |
| Gene Sequence |
| Protein sequence |
