AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene034894

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034894.t1 MTR_1g060520 83.686 331 23 1 1 331 24 323 0.0 573
MS.gene034894.t1 MTR_1g060500 80.655 336 60 2 1 331 24 359 0.0 556
MS.gene034894.t1 MTR_1g060490 78.354 328 68 2 4 331 24 348 0.0 535
MS.gene034894.t1 MTR_7g104220 59.524 336 124 8 1 329 23 353 5.47e-141 403
MS.gene034894.t1 MTR_1g092740 49.359 312 143 6 17 322 38 340 3.46e-102 304
MS.gene034894.t1 MTR_1g092690 43.987 316 163 5 12 322 46 352 9.61e-91 275
MS.gene034894.t1 MTR_1g092760 43.478 322 168 5 15 331 37 349 5.68e-89 270
MS.gene034894.t1 MTR_1g092750 43.711 318 163 6 12 322 35 343 2.12e-85 261
MS.gene034894.t1 MTR_1g060530 85.714 84 12 0 158 241 31 114 5.51e-46 153
MS.gene034894.t1 MTR_2g044100 32.087 321 175 12 18 311 44 348 9.38e-38 139
MS.gene034894.t1 MTR_8g031390 29.936 314 188 12 18 313 38 337 1.38e-32 125
MS.gene034894.t1 MTR_8g031400 29.841 315 188 12 18 313 38 338 1.14e-31 122
MS.gene034894.t1 MTR_8g022810 27.217 327 208 12 15 321 39 355 1.36e-31 122
MS.gene034894.t1 MTR_3g098270 29.688 320 187 13 18 312 35 341 7.31e-30 117
MS.gene034894.t1 MTR_8g031390 30.742 283 167 11 18 282 38 309 5.47e-29 114
MS.gene034894.t1 MTR_8g022790 29.560 318 177 13 18 311 38 332 2.81e-28 112
MS.gene034894.t1 MTR_3g005660 28.931 318 190 11 18 311 37 342 6.07e-28 112
MS.gene034894.t1 MTR_1g092710 35.204 196 94 7 130 322 3 168 1.31e-27 106
MS.gene034894.t1 MTR_8g031430 28.662 314 193 13 18 313 38 338 2.12e-27 110
MS.gene034894.t1 MTR_3g082830 29.641 334 204 14 18 331 39 361 2.65e-27 110
MS.gene034894.t1 MTR_5g074270 29.305 331 195 16 18 322 34 351 7.64e-27 108
MS.gene034894.t1 MTR_5g009100 28.165 316 188 11 19 310 48 348 8.68e-27 109
MS.gene034894.t1 MTR_3g052580 26.625 323 209 14 18 321 29 342 1.69e-26 108
MS.gene034894.t1 MTR_4g035353 26.462 325 203 11 18 317 32 345 1.76e-26 108
MS.gene034894.t1 MTR_3g052580 26.625 323 209 14 18 321 28 341 1.93e-26 108
MS.gene034894.t1 MTR_3g052480 26.606 327 206 14 18 321 34 349 1.04e-25 105
MS.gene034894.t1 MTR_0009s0250 28.254 315 195 13 18 318 34 331 3.98e-25 103
MS.gene034894.t1 MTR_5g084770 27.976 336 198 15 18 326 29 347 7.89e-25 103
MS.gene034894.t1 MTR_2g017965 28.213 319 189 15 18 315 34 333 1.33e-24 103
MS.gene034894.t1 MTR_5g084790 28.818 347 207 16 10 330 22 354 1.89e-24 102
MS.gene034894.t1 MTR_1g025760 26.087 345 224 12 5 330 70 402 1.93e-24 102
MS.gene034894.t1 MTR_8g031420 26.837 313 200 11 18 313 36 336 4.43e-24 101
MS.gene034894.t1 MTR_3g052490 25.532 329 206 16 18 321 33 347 5.89e-24 100
MS.gene034894.t1 MTR_3g114090 26.888 331 211 13 18 328 37 356 1.15e-23 100
MS.gene034894.t1 MTR_1g079530 28.391 317 188 15 16 311 28 326 1.60e-23 99.8
MS.gene034894.t1 MTR_2g084585 27.492 331 211 11 18 329 31 351 3.13e-23 99.0
MS.gene034894.t1 MTR_7g116870 26.347 334 196 13 16 313 32 351 5.20e-23 98.6
MS.gene034894.t1 MTR_3g024510 25.000 316 203 10 19 313 40 342 5.56e-23 98.6
MS.gene034894.t1 MTR_1g079540 25.000 336 207 13 13 321 27 344 5.75e-23 98.2
MS.gene034894.t1 MTR_8g075230 26.769 325 209 10 12 317 31 345 1.19e-22 97.4
MS.gene034894.t1 MTR_5g084750 26.837 313 200 11 18 311 31 333 2.32e-22 96.3
MS.gene034894.t1 MTR_8g079050 24.451 319 207 13 19 312 39 348 2.67e-22 96.7
MS.gene034894.t1 MTR_7g116520 26.019 319 199 13 16 311 33 337 5.24e-22 95.5
MS.gene034894.t1 MTR_2g033930 26.266 316 199 11 18 312 33 335 6.39e-22 95.5
MS.gene034894.t1 MTR_4g122200 28.829 333 203 16 19 329 37 357 9.06e-22 95.1
MS.gene034894.t1 MTR_0565s0010 26.250 320 195 12 19 313 34 337 1.36e-21 94.4
MS.gene034894.t1 MTR_2g033920 27.673 318 194 13 19 313 37 341 2.23e-21 94.0
MS.gene034894.t1 MTR_1g025680 27.532 316 196 14 18 312 35 338 2.48e-21 94.7
MS.gene034894.t1 MTR_3g021460 26.923 312 191 11 18 312 32 323 3.91e-21 92.8
MS.gene034894.t1 MTR_3g005650 25.786 318 196 13 17 312 30 329 6.06e-21 92.4
MS.gene034894.t1 MTR_1g025720 26.567 335 208 14 18 331 38 355 7.31e-21 92.4
MS.gene034894.t1 MTR_2g015670 25.959 339 198 13 13 321 27 342 7.54e-21 92.4
MS.gene034894.t1 MTR_8g028160 24.118 340 200 11 16 313 35 358 1.17e-20 92.0
MS.gene034894.t1 MTR_2g461580 25.076 327 207 11 18 327 32 337 1.75e-20 91.3
MS.gene034894.t1 MTR_2g015580 25.305 328 210 12 18 317 48 368 2.00e-20 91.7
MS.gene034894.t1 MTR_4g056160 26.667 315 203 11 18 312 28 334 4.65e-20 89.7
MS.gene034894.t1 MTR_1g025700 24.198 343 228 12 5 328 40 369 5.44e-20 90.1
MS.gene034894.t1 MTR_2g015080 26.957 345 208 17 4 318 27 357 6.94e-20 89.7
MS.gene034894.t1 MTR_7g116510 25.220 341 214 15 16 331 24 348 9.67e-20 89.0
MS.gene034894.t1 MTR_5g083040 24.545 330 213 10 15 319 30 348 9.96e-20 89.0
MS.gene034894.t1 MTR_1g025780 23.795 332 222 12 18 330 42 361 1.26e-19 89.0
MS.gene034894.t1 MTR_5g078210 24.691 324 206 12 19 320 27 334 1.60e-19 88.6
MS.gene034894.t1 MTR_2g017955 25.915 328 188 12 18 317 34 334 2.15e-19 88.2
MS.gene034894.t1 MTR_4g104240 26.269 335 209 12 12 319 34 357 4.21e-19 87.4
MS.gene034894.t1 MTR_3g464730 26.347 334 214 13 18 330 29 351 8.49e-19 86.3
MS.gene034894.t1 MTR_4g108690 24.620 329 211 12 19 324 29 343 9.07e-19 86.3
MS.gene034894.t1 MTR_7g116500 25.078 319 202 13 15 310 31 335 1.13e-18 86.3
MS.gene034894.t1 MTR_6g021530 25.076 331 208 15 16 321 28 343 1.43e-18 85.9
MS.gene034894.t1 MTR_8g022810 24.923 325 165 12 15 321 39 302 1.49e-18 85.1
MS.gene034894.t1 MTR_1g025910 25.786 318 207 11 22 321 41 347 1.52e-18 85.9
MS.gene034894.t1 MTR_4g087985 24.545 330 213 12 15 318 34 353 1.63e-18 85.5
MS.gene034894.t1 MTR_5g022630 25.836 329 205 13 12 315 38 352 3.76e-18 84.7
MS.gene034894.t1 MTR_8g075220 25.575 348 215 15 12 330 35 367 5.02e-18 84.3
MS.gene034894.t1 MTR_8g074560 28.660 321 189 16 18 311 32 339 5.10e-18 84.3
MS.gene034894.t1 MTR_4g056280 25.938 320 196 13 18 312 31 334 5.38e-18 84.0
MS.gene034894.t1 MTR_7g008060 24.096 332 196 12 16 321 32 333 6.17e-18 84.0
MS.gene034894.t1 MTR_5g022640 24.923 325 216 11 12 317 38 353 7.73e-18 83.6
MS.gene034894.t1 MTR_4g019880 25.309 324 199 14 15 311 30 337 8.13e-18 83.6
MS.gene034894.t1 MTR_1g024890 23.780 328 221 12 13 321 28 345 8.72e-18 83.6
MS.gene034894.t1 MTR_2g015590 24.545 330 203 12 18 313 32 349 1.58e-17 82.8
MS.gene034894.t1 MTR_8g087890 24.383 324 195 13 19 313 33 335 1.79e-17 82.8
MS.gene034894.t1 MTR_7g116570 24.534 322 200 13 16 311 33 337 2.55e-17 82.4
MS.gene034894.t1 MTR_3g069780 27.035 344 198 19 14 321 27 353 2.94e-17 82.0
MS.gene034894.t1 MTR_3g023220 26.646 319 182 14 18 312 34 324 3.28e-17 81.6
MS.gene034894.t1 MTR_2g017925 26.115 314 192 11 18 312 34 326 4.10e-17 81.6
MS.gene034894.t1 MTR_5g093090 24.843 318 206 13 18 313 29 335 5.41e-17 81.3
MS.gene034894.t1 MTR_2g015630 23.099 342 206 11 22 323 36 360 6.65e-17 81.3
MS.gene034894.t1 MTR_2g015650 25.073 343 210 11 13 321 27 356 1.38e-16 80.1
MS.gene034894.t1 MTR_7g087190 23.662 355 221 15 5 321 33 375 1.87e-16 79.7
MS.gene034894.t1 MTR_7g033150 24.198 343 215 12 16 321 34 368 2.58e-16 79.3
MS.gene034894.t1 MTR_3g448360 24.566 346 205 15 14 321 26 353 2.81e-16 79.3
MS.gene034894.t1 MTR_7g111780 24.762 315 207 8 18 313 37 340 3.87e-16 78.6
MS.gene034894.t1 MTR_2g100620 25.075 335 215 12 18 329 32 353 4.05e-16 78.6
MS.gene034894.t1 MTR_8g087870 24.299 321 187 13 18 311 30 321 4.36e-16 78.6
MS.gene034894.t1 MTR_1g030275 23.143 350 219 12 7 321 31 365 8.89e-16 77.8
MS.gene034894.t1 MTR_2g043980 24.348 345 208 12 5 321 24 343 3.09e-15 76.3
MS.gene034894.t1 MTR_2g015590 26.749 243 146 8 18 232 32 270 8.12e-15 74.7
MS.gene034894.t1 MTR_3g114120 25.298 336 215 15 5 321 37 355 2.79e-14 73.2
MS.gene034894.t1 MTR_3g069520 24.556 338 204 16 14 317 27 347 3.56e-14 73.2
MS.gene034894.t1 MTR_3g463960 23.410 346 211 14 14 321 41 370 4.69e-14 72.8
MS.gene034894.t1 MTR_3g463950 23.410 346 211 14 14 321 41 370 4.69e-14 72.8
MS.gene034894.t1 MTR_3g463970 23.410 346 211 14 14 321 41 370 4.69e-14 72.8
MS.gene034894.t1 MTR_3g463940 23.410 346 211 14 14 321 41 370 4.69e-14 72.8
MS.gene034894.t1 MTR_5g078210 26.471 238 146 8 19 234 27 257 4.85e-14 72.4
MS.gene034894.t1 MTR_1g030268 23.011 352 219 13 7 322 32 367 6.31e-14 72.4
MS.gene034894.t1 MTR_2g079090 24.551 334 203 14 16 321 29 341 7.81e-14 72.0
MS.gene034894.t1 MTR_2g079080 24.551 334 203 14 16 321 29 341 1.74e-13 70.9
MS.gene034894.t1 MTR_0029s0100 24.551 334 203 14 16 321 29 341 2.45e-13 70.5
MS.gene034894.t1 MTR_1g030230 21.469 354 228 12 5 322 22 361 4.24e-13 69.7
MS.gene034894.t1 MTR_7g113860 23.714 350 214 13 10 321 24 358 5.51e-13 69.3
MS.gene034894.t1 MTR_0029s0050 24.251 334 204 14 16 321 29 341 6.68e-13 68.9
MS.gene034894.t1 MTR_8g038680 22.024 336 219 11 14 313 20 348 3.94e-12 67.0
MS.gene034894.t1 MTR_7g033165 24.024 333 204 14 18 313 34 354 4.47e-12 66.6
MS.gene034894.t1 MTR_2g017875 24.773 331 201 15 18 319 35 346 8.08e-12 65.9
MS.gene034894.t1 MTR_6g007095 21.701 341 227 11 3 311 22 354 1.99e-11 65.5
MS.gene034894.t1 MTR_1g082390 26.510 298 175 14 3 271 19 301 2.89e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034894.t1 AT5G03610 54.487 312 133 5 17 323 43 350 2.80e-115 338
MS.gene034894.t1 AT3G09930 48.882 313 150 6 17 323 39 347 5.42e-105 311
MS.gene034894.t1 AT3G09930 48.882 313 150 6 17 323 39 347 5.42e-105 311
MS.gene034894.t1 AT5G03600 40.798 326 170 10 5 321 35 346 3.30e-74 233
MS.gene034894.t1 AT5G03600 40.741 324 169 10 7 321 2 311 4.03e-74 231
MS.gene034894.t1 AT2G36325 39.297 313 173 10 17 321 47 350 1.03e-68 219
MS.gene034894.t1 AT5G03590 34.899 298 143 8 32 323 1 253 8.66e-57 185
MS.gene034894.t1 AT5G03590 30.537 298 125 8 32 323 1 222 1.15e-43 150
MS.gene034894.t1 AT5G03590 42.775 173 87 6 12 176 25 193 1.73e-37 133
MS.gene034894.t1 AT1G53920 29.231 325 205 11 18 325 49 365 1.15e-32 125
MS.gene034894.t1 AT5G41890 28.882 322 196 11 19 313 33 348 4.84e-31 120
MS.gene034894.t1 AT1G58430 29.003 331 198 12 18 324 36 353 8.74e-31 119
MS.gene034894.t1 AT2G31540 28.319 339 202 12 12 322 26 351 9.53e-30 117
MS.gene034894.t1 AT2G40250 27.576 330 200 12 14 317 33 349 3.42e-29 115
MS.gene034894.t1 AT5G08460 27.500 320 195 13 18 312 50 357 1.37e-28 114
MS.gene034894.t1 AT2G30310 27.134 328 208 11 18 324 35 352 1.72e-28 113
MS.gene034894.t1 AT1G54020 29.338 317 193 14 12 316 28 325 2.03e-28 113
MS.gene034894.t1 AT5G40990 30.000 320 185 14 18 311 38 344 6.40e-28 112
MS.gene034894.t1 AT1G20130 28.274 336 205 12 18 327 185 510 7.83e-28 113
MS.gene034894.t1 AT1G20120 28.399 331 200 16 6 314 69 384 1.14e-27 112
MS.gene034894.t1 AT1G20130 28.274 336 205 12 18 327 205 530 1.16e-27 113
MS.gene034894.t1 AT3G14225 30.211 331 200 14 3 311 23 344 1.65e-27 110
MS.gene034894.t1 AT2G04570 29.231 325 197 14 18 321 29 341 1.75e-27 110
MS.gene034894.t1 AT1G33811 27.950 322 190 12 18 311 35 342 3.13e-27 110
MS.gene034894.t1 AT3G14225 29.552 335 201 14 3 311 23 348 2.83e-26 107
MS.gene034894.t1 AT1G75890 29.179 329 191 13 12 314 42 354 1.11e-25 105
MS.gene034894.t1 AT1G54000 28.155 309 196 12 12 308 31 325 1.25e-25 106
MS.gene034894.t1 AT1G75890 29.179 329 191 13 12 314 71 383 1.66e-25 105
MS.gene034894.t1 AT1G71691 27.414 321 184 14 18 311 56 354 2.32e-25 105
MS.gene034894.t1 AT5G18430 27.726 321 193 12 16 311 27 333 2.51e-25 104
MS.gene034894.t1 AT2G24560 26.220 328 211 12 18 324 35 352 2.90e-25 104
MS.gene034894.t1 AT1G71250 27.044 318 193 12 18 311 42 344 3.38e-25 104
MS.gene034894.t1 AT1G28640 27.829 327 198 12 16 312 34 352 3.85e-25 104
MS.gene034894.t1 AT4G10950 27.246 334 203 13 18 327 72 389 1.04e-24 103
MS.gene034894.t1 AT2G30220 25.836 329 211 11 18 324 34 351 1.56e-24 102
MS.gene034894.t1 AT3G14820 26.647 334 218 11 7 324 22 344 4.05e-24 101
MS.gene034894.t1 AT1G54010 28.205 312 198 13 12 311 31 328 4.05e-24 102
MS.gene034894.t1 AT3G14210 26.603 312 201 13 14 311 33 330 1.44e-23 100
MS.gene034894.t1 AT5G42170 25.617 324 207 12 18 321 51 360 1.47e-23 100
MS.gene034894.t1 AT1G59406 24.571 350 216 12 7 329 20 348 2.06e-23 99.4
MS.gene034894.t1 AT1G59030 24.571 350 216 12 7 329 20 348 2.06e-23 99.4
MS.gene034894.t1 AT1G58725 24.571 350 216 12 7 329 20 348 2.06e-23 99.4
MS.gene034894.t1 AT1G75890 27.778 342 192 13 12 314 42 367 3.26e-23 99.4
MS.gene034894.t1 AT1G20132 25.294 340 219 13 12 329 56 382 4.80e-23 99.0
MS.gene034894.t1 AT1G75900 25.575 348 221 14 5 330 33 364 5.38e-23 98.6
MS.gene034894.t1 AT1G54030 26.885 305 195 10 15 311 50 334 8.21e-23 98.6
MS.gene034894.t1 AT5G22810 27.893 337 205 11 18 329 35 358 9.64e-23 97.8
MS.gene034894.t1 AT1G75880 26.879 346 216 14 5 328 42 372 1.13e-22 97.8
MS.gene034894.t1 AT2G19060 26.603 312 202 11 19 317 32 329 1.15e-22 97.4
MS.gene034894.t1 AT4G10950 26.347 334 202 13 18 327 72 385 1.35e-22 97.8
MS.gene034894.t1 AT1G20135 26.498 317 196 11 18 317 30 326 1.58e-22 96.7
MS.gene034894.t1 AT3G50400 24.534 322 206 11 19 313 36 347 1.69e-22 97.1
MS.gene034894.t1 AT5G15720 26.398 322 198 14 15 311 28 335 3.79e-22 95.9
MS.gene034894.t1 AT1G06990 25.449 334 211 12 18 327 38 357 5.37e-22 95.5
MS.gene034894.t1 AT2G03980 25.879 313 201 13 18 311 44 344 5.64e-22 95.5
MS.gene034894.t1 AT2G03980 25.879 313 201 13 18 311 44 344 5.64e-22 95.5
MS.gene034894.t1 AT2G03980 25.879 313 201 13 18 311 44 344 5.64e-22 95.5
MS.gene034894.t1 AT2G03980 25.879 313 201 13 18 311 44 344 5.64e-22 95.5
MS.gene034894.t1 AT1G75880 26.801 347 216 14 5 328 42 373 5.73e-22 95.5
MS.gene034894.t1 AT1G28650 25.075 335 215 11 16 321 36 363 5.80e-22 95.9
MS.gene034894.t1 AT5G33370 25.532 329 210 14 15 321 28 343 1.71e-21 94.4
MS.gene034894.t1 AT3G53100 25.301 332 217 11 18 329 30 350 3.11e-21 93.2
MS.gene034894.t1 AT5G45960 26.744 344 213 13 5 322 35 365 3.39e-21 93.6
MS.gene034894.t1 AT2G23540 25.153 326 196 12 19 312 50 359 4.52e-21 93.2
MS.gene034894.t1 AT3G48460 28.319 339 199 13 10 317 31 356 6.57e-21 92.8
MS.gene034894.t1 AT1G58520 24.277 346 207 13 11 329 24 341 1.01e-20 91.7
MS.gene034894.t1 AT1G58525 24.277 346 207 13 11 329 24 341 1.01e-20 91.7
MS.gene034894.t1 AT1G71120 23.952 334 222 11 18 329 32 355 1.17e-20 91.7
MS.gene034894.t1 AT2G27360 24.260 338 207 11 16 317 32 356 1.30e-20 92.0
MS.gene034894.t1 AT1G75930 25.234 321 199 11 18 317 30 330 2.41e-20 90.5
MS.gene034894.t1 AT1G53940 26.266 316 202 11 18 311 40 346 3.40e-20 90.5
MS.gene034894.t1 AT1G28670 25.225 333 210 12 16 317 34 358 3.41e-20 90.9
MS.gene034894.t1 AT3G14220 26.687 326 189 14 18 319 33 332 4.80e-20 90.1
MS.gene034894.t1 AT4G01130 25.959 339 195 13 16 313 33 356 5.22e-20 90.1
MS.gene034894.t1 AT5G03810 26.923 338 207 13 17 329 30 352 1.01e-19 89.0
MS.gene034894.t1 AT5G55050 26.061 330 202 14 18 319 40 355 1.03e-19 89.4
MS.gene034894.t1 AT4G28780 26.706 337 200 16 13 321 27 344 1.20e-19 89.0
MS.gene034894.t1 AT5G33370 28.279 244 147 10 15 236 28 265 1.21e-19 88.6
MS.gene034894.t1 AT5G45950 25.723 346 224 12 1 329 22 351 1.61e-19 88.6
MS.gene034894.t1 AT1G54030 28.821 229 144 7 15 235 50 267 2.22e-19 87.4
MS.gene034894.t1 AT5G45670 25.078 319 198 12 19 312 31 333 2.86e-19 87.8
MS.gene034894.t1 AT1G29660 25.857 321 202 13 19 317 34 340 4.67e-19 87.4
MS.gene034894.t1 AT1G71691 27.509 269 158 11 17 261 55 310 7.41e-19 85.9
MS.gene034894.t1 AT1G29670 25.758 330 206 14 5 312 22 334 1.23e-18 85.9
MS.gene034894.t1 AT2G19050 25.625 320 210 11 19 326 33 336 1.87e-18 85.5
MS.gene034894.t1 AT1G29670 25.680 331 207 13 5 313 90 403 2.18e-18 85.9
MS.gene034894.t1 AT2G19010 26.129 310 196 12 18 312 31 322 2.50e-18 85.1
MS.gene034894.t1 AT1G73610 25.225 333 191 12 12 317 30 331 3.28e-18 84.7
MS.gene034894.t1 AT2G42990 26.814 317 195 15 18 311 29 331 3.97e-18 84.3
MS.gene034894.t1 AT5G03820 26.923 338 206 14 18 329 34 356 4.35e-18 84.3
MS.gene034894.t1 AT5G37690 22.611 314 212 10 19 313 29 330 4.61e-18 84.3
MS.gene034894.t1 AT1G28610 23.699 346 209 13 16 323 30 358 4.80e-18 84.3
MS.gene034894.t1 AT1G28570 23.494 332 216 12 13 314 30 353 5.00e-18 84.3
MS.gene034894.t1 AT5G03820 26.923 338 206 14 18 329 62 384 5.10e-18 84.3
MS.gene034894.t1 AT1G56670 24.923 325 204 8 18 317 41 350 5.35e-18 84.3
MS.gene034894.t1 AT2G19010 25.806 310 197 11 18 312 61 352 5.45e-18 84.3
MS.gene034894.t1 AT4G18970 25.938 320 194 14 19 312 30 332 5.67e-18 84.0
MS.gene034894.t1 AT5G15720 26.667 270 169 11 15 261 28 291 6.06e-18 83.6
MS.gene034894.t1 AT4G18970 25.392 319 197 13 19 312 30 332 8.22e-18 84.0
MS.gene034894.t1 AT1G28590 23.919 347 208 13 16 323 35 364 1.19e-17 83.6
MS.gene034894.t1 AT1G28580 23.476 328 215 11 16 314 36 356 2.70e-17 82.4
MS.gene034894.t1 AT1G53990 26.168 321 189 12 18 311 36 335 4.95e-17 81.3
MS.gene034894.t1 AT1G54020 27.615 239 153 10 86 316 13 239 8.43e-17 79.7
MS.gene034894.t1 AT1G54020 27.615 239 153 10 86 316 13 239 8.43e-17 79.7
MS.gene034894.t1 AT1G54020 27.615 239 153 10 86 316 13 239 8.43e-17 79.7
MS.gene034894.t1 AT1G74460 23.853 327 216 11 19 324 25 339 8.46e-17 80.9
MS.gene034894.t1 AT3G16370 25.369 339 203 14 18 326 31 349 8.60e-17 80.5
MS.gene034894.t1 AT1G75920 25.513 341 209 15 3 321 17 334 1.39e-16 79.7
MS.gene034894.t1 AT1G28600 23.145 337 210 12 16 317 30 352 2.46e-16 79.7
MS.gene034894.t1 AT5G45910 27.011 348 197 17 16 321 29 361 5.90e-16 78.2
MS.gene034894.t1 AT1G09390 24.000 325 207 8 18 317 38 347 9.43e-16 77.8
MS.gene034894.t1 AT1G28660 25.076 331 202 14 21 317 39 357 9.89e-16 77.8
MS.gene034894.t1 AT1G31550 24.425 348 204 14 16 323 35 363 1.40e-15 77.4
MS.gene034894.t1 AT2G19050 27.273 242 159 8 19 248 33 269 1.93e-15 75.9
MS.gene034894.t1 AT2G31550 24.378 201 136 5 130 322 18 210 3.64e-15 73.9
MS.gene034894.t1 AT1G75910 24.419 344 204 13 7 321 18 334 4.38e-15 75.5
MS.gene034894.t1 AT5G63170 23.248 314 204 11 18 314 29 322 4.55e-15 75.5
MS.gene034894.t1 AT1G23500 23.148 324 198 11 18 317 36 332 1.14e-14 74.3
MS.gene034894.t1 AT4G30140 24.430 307 199 8 19 311 35 322 1.26e-14 74.3
MS.gene034894.t1 AT4G01130 26.165 279 161 10 16 262 33 298 2.34e-14 73.2
MS.gene034894.t1 AT5G14450 23.123 333 207 13 18 313 42 362 2.96e-14 73.6
MS.gene034894.t1 AT3G43550 25.177 282 170 11 5 261 20 285 3.48e-14 72.4
MS.gene034894.t1 AT1G28660 25.378 331 200 15 21 317 39 356 3.69e-14 73.2
MS.gene034894.t1 AT4G16230 27.228 202 120 7 19 199 32 227 4.48e-14 71.2
MS.gene034894.t1 AT1G31550 24.713 348 200 16 16 323 35 360 5.12e-14 72.8
MS.gene034894.t1 AT1G54790 25.152 330 198 12 21 313 36 353 5.95e-14 72.4
MS.gene034894.t1 AT1G67830 21.239 339 224 10 18 321 31 361 7.90e-14 72.0
MS.gene034894.t1 AT1G56670 24.797 246 160 4 18 244 41 280 1.29e-13 70.9
MS.gene034894.t1 AT1G53940 26.809 235 152 8 18 235 40 271 2.11e-13 70.1
MS.gene034894.t1 AT5G37690 21.975 314 206 11 19 313 29 322 2.20e-13 70.5
MS.gene034894.t1 AT1G75920 24.859 354 210 16 3 321 12 344 2.42e-13 70.5
MS.gene034894.t1 AT3G26430 24.000 350 211 16 12 321 28 362 2.56e-13 70.5
MS.gene034894.t1 AT3G62280 23.620 326 198 12 18 313 37 341 4.17e-13 69.7
MS.gene034894.t1 AT1G71691 23.828 256 152 11 81 311 16 253 1.35e-12 67.8
MS.gene034894.t1 AT1G75920 24.832 298 187 12 42 321 28 306 2.30e-12 67.4
MS.gene034894.t1 AT3G27950 23.919 347 206 15 12 321 29 354 7.58e-12 66.2
MS.gene034894.t1 AT1G54020 29.319 191 117 9 134 316 10 190 8.18e-12 64.7

Find 70 sgRNAs with CRISPR-Local

Find 122 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTTGAGTTGTCATATT+TGG 0.146360 1.2:+46616543 None:intergenic
ACATACTTCTAATAAATATT+TGG 0.172791 1.2:-46615257 MS.gene034894:CDS
TTGTTCTGCAGCCAAGTATT+TGG 0.230875 1.2:-46616688 MS.gene034894:intron
TGGTGTGTTCCTTTGTTTCT+TGG 0.252575 1.2:+46615416 None:intergenic
CCCGAACAGGATTTGAAGTA+TGG 0.259601 1.2:-46616618 MS.gene034894:CDS
ATATTGAATCAACTTTCTTT+TGG 0.261143 1.2:-46615225 MS.gene034894:CDS
ATTGCTTATGTTTCTGTTGC+TGG 0.261143 1.2:-46616462 MS.gene034894:CDS
TCAAACGTTCCTTAATGTTA+TGG 0.312425 1.2:+46615335 None:intergenic
CGGGGAAAGGTTATGCCATA+TGG 0.321705 1.2:+46616907 None:intergenic
CCCTTCTAGCCATAACATTA+AGG 0.338472 1.2:-46615344 MS.gene034894:CDS
TCCTTAATGTTATGGCTAGA+AGG 0.339670 1.2:+46615343 None:intergenic
ATCACTGATTCAATGAAAGA+TGG 0.393616 1.2:+46615631 None:intergenic
TTGATTCATCTTCAAAGCTT+AGG 0.395738 1.2:-46615589 MS.gene034894:CDS
TACCACAATTTGTGAATGAT+TGG 0.398804 1.2:+46616654 None:intergenic
TAAAACCTATATCTGATTCA+TGG 0.400928 1.2:-46616936 MS.gene034894:CDS
CCCATACTTCAAATCCTGTT+CGG 0.407942 1.2:+46616617 None:intergenic
TATGATTACATGGCCATAGA+TGG 0.414416 1.2:-46616429 MS.gene034894:CDS
GGCCATAGATGGCTCTCTTT+CGG 0.418530 1.2:-46616418 MS.gene034894:intron
CCATACTTCAAATCCTGTTC+GGG 0.419024 1.2:+46616618 None:intergenic
GCTTTGAAGATGAATCAAAT+TGG 0.421198 1.2:+46615594 None:intergenic
TACCGAAAGAGAGCCATCTA+TGG 0.428847 1.2:+46616416 None:intergenic
TGATCTCAATTCCAAATACT+TGG 0.431077 1.2:+46616677 None:intergenic
AGAAACATAAGCAATAGAAT+TGG 0.446043 1.2:+46616470 None:intergenic
GCTCTCCATGAATCAGATAT+AGG 0.462892 1.2:+46616931 None:intergenic
GGGGAAAGGTTATGCCATAT+GGG 0.463305 1.2:+46616908 None:intergenic
GTGGGTGATTTACAACCTCT+TGG 0.468023 1.2:-46615550 MS.gene034894:CDS
GGTTCAACTTCGTAACAGAT+TGG 0.473218 1.2:+46615437 None:intergenic
CATTCCAACCTGCTTGTGTT+GGG 0.480341 1.2:+46615191 None:intergenic
CATAACCTTTCCCCGAAAAC+CGG 0.480951 1.2:-46616899 MS.gene034894:CDS
GGAGACTCGTATGTTGATAG+TGG 0.485625 1.2:-46616967 MS.gene034894:CDS
TCTGCCGTCGGAGAATCTTC+CGG 0.488295 1.2:+46616876 None:intergenic
TAATAACATAGTGCCCGAAC+AGG 0.492960 1.2:-46616631 MS.gene034894:CDS
ACTATTGCAACTTTGAAATG+AGG 0.493039 1.2:+46615501 None:intergenic
AGGATTTAAGAGAATTGTTG+TGG 0.493326 1.2:-46615569 MS.gene034894:CDS
AACTTTGCATATGGTGGTAC+AGG 0.496157 1.2:-46616591 MS.gene034894:CDS
GATTCATGGAGAGCCCCATA+TGG 0.498775 1.2:-46616922 MS.gene034894:CDS
ACAAATGGAGATGCAAGTTA+AGG 0.510396 1.2:-46617034 None:intergenic
CACCAATCATTCACAAATTG+TGG 0.513733 1.2:-46616656 MS.gene034894:CDS
TATAATGAGTTGGAGAAGAA+AGG 0.514463 1.2:-46615163 MS.gene034894:CDS
CCTTAATGTTATGGCTAGAA+GGG 0.516210 1.2:+46615344 None:intergenic
GCATTCCAACCTGCTTGTGT+TGG 0.516376 1.2:+46615190 None:intergenic
ATTGGTTCAATAAGTTGTTG+TGG 0.522482 1.2:+46615455 None:intergenic
AAATGACTACTATGATTACA+TGG 0.536213 1.2:-46616439 MS.gene034894:CDS
TCTAGTATAAAATTTGATGA+AGG 0.538645 1.2:+46615140 None:intergenic
GGATTTAAGAGAATTGTTGT+GGG 0.540936 1.2:-46615568 MS.gene034894:CDS
CACACCACATTCACAATCCT+AGG 0.549324 1.2:-46615400 MS.gene034894:CDS
TCACTGATTCAATGAAAGAT+GGG 0.549620 1.2:+46615632 None:intergenic
TTGAAGATGAATCAAATTGG+TGG 0.551393 1.2:+46615597 None:intergenic
ACCTTTCCCCGAAAACCGGC+CGG 0.554274 1.2:-46616895 MS.gene034894:CDS
CGTTTGAAGCCATGCTGCGT+CGG 0.555770 1.2:-46615319 MS.gene034894:CDS
GAATGCTGTGTATAATGAGT+TGG 0.561108 1.2:-46615173 MS.gene034894:CDS
CAGTTACACCCAACACAAGC+AGG 0.562042 1.2:-46615199 MS.gene034894:CDS
TGAAACTATCGAAAATGCCT+AGG 0.565738 1.2:+46615383 None:intergenic
TATGGGATGAACTTTGCATA+TGG 0.569763 1.2:-46616600 MS.gene034894:CDS
TTGAAATGAGGTTTCAGCAG+TGG 0.574553 1.2:+46615513 None:intergenic
CCGTCGGAGAATCTTCCGGC+CGG 0.581240 1.2:+46616880 None:intergenic
CCGAACAGGATTTGAAGTAT+GGG 0.582491 1.2:-46616617 MS.gene034894:CDS
TACACCCAACACAAGCAGGT+TGG 0.603846 1.2:-46615195 MS.gene034894:CDS
GTCAGTTAAAACTCTGCCGT+CGG 0.606044 1.2:+46616864 None:intergenic
AGTTGTTGTGGAGAGCTACA+AGG 0.617684 1.2:+46615467 None:intergenic
GAGGTTTCAGCAGTGGCTTG+AGG 0.618863 1.2:+46615520 None:intergenic
GTAAGCGATGAGTATACTTG+TGG 0.628921 1.2:-46615295 MS.gene034894:CDS
TCGCTTACACCGACGCAGCA+TGG 0.629032 1.2:+46615310 None:intergenic
GAAGTTGAACCAAGAAACAA+AGG 0.632242 1.2:-46615425 MS.gene034894:CDS
GGGAAAGGTTATGCCATATG+GGG 0.639788 1.2:+46616909 None:intergenic
AATGCCTAGGATTGTGAATG+TGG 0.644042 1.2:+46615396 None:intergenic
GGGATGAACTTTGCATATGG+TGG 0.671490 1.2:-46616597 MS.gene034894:CDS
CCGGCCGGAAGATTCTCCGA+CGG 0.685737 1.2:-46616880 MS.gene034894:CDS
AGGATGATTGAGATGGCGAG+TGG 0.741996 1.2:+46617011 None:intergenic
GCTTGAGGAAGACAACCAAG+AGG 0.760979 1.2:+46615535 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATACTTCTAATAAATATT+TGG - chr1.2:46616914-46616933 MS.gene034894:CDS 15.0%
!! GGTAAATTAATTAATTAACT+AGG + chr1.2:46615347-46615366 None:intergenic 15.0%
!!! AAAACAAACAATTTTTTTGA+AGG + chr1.2:46615183-46615202 None:intergenic 15.0%
!!! TCAAAAAAATTGTTTGTTTT+CGG - chr1.2:46615183-46615202 MS.gene034894:CDS 15.0%
!!! TTTTTTTTAACGTAAGTAAT+TGG - chr1.2:46615438-46615457 MS.gene034894:CDS 15.0%
!! GATAAGATTAAATACAAGTT+AGG - chr1.2:46616246-46616265 MS.gene034894:intron 20.0%
!!! AGACTCATATAAATTTTTTG+AGG - chr1.2:46615978-46615997 MS.gene034894:intron 20.0%
!!! ATATTGAATCAACTTTCTTT+TGG - chr1.2:46616946-46616965 MS.gene034894:CDS 20.0%
!!! CATTTTTTTTTTGATAAGCA+AGG + chr1.2:46616084-46616103 None:intergenic 20.0%
!!! GACTCATATAAATTTTTTGA+GGG - chr1.2:46615979-46615998 MS.gene034894:intron 20.0%
!!! TATTGAATCAACTTTCTTTT+GGG - chr1.2:46616947-46616966 MS.gene034894:CDS 20.0%
!!! TTAGGAAGAAATGTATTTTT+AGG - chr1.2:46616264-46616283 MS.gene034894:intron 20.0%
! AAATGACTACTATGATTACA+TGG - chr1.2:46615732-46615751 MS.gene034894:intron 25.0%
! AATTTCATTGAATAAACGCA+GGG - chr1.2:46616513-46616532 MS.gene034894:CDS 25.0%
! AGAAACATAAGCAATAGAAT+TGG + chr1.2:46615704-46615723 None:intergenic 25.0%
! TAAAACCTATATCTGATTCA+TGG - chr1.2:46615235-46615254 MS.gene034894:CDS 25.0%
! TAATTTCATTGAATAAACGC+AGG - chr1.2:46616512-46616531 MS.gene034894:CDS 25.0%
! TGAAATTATACATCCAAGAA+TGG - chr1.2:46616311-46616330 MS.gene034894:intron 25.0%
! TTAGAAACCCTTCTTAATTA+TGG + chr1.2:46616426-46616445 None:intergenic 25.0%
!! GTATTTGATACATTTTCTTC+AGG - chr1.2:46615604-46615623 MS.gene034894:CDS 25.0%
!! TATTTTTCTCTTTCCATTCT+TGG + chr1.2:46616327-46616346 None:intergenic 25.0%
!! TGAATCAGATATAGGTTTTA+TGG + chr1.2:46615235-46615254 None:intergenic 25.0%
!!! AGAGAGTATAGACATTTTTT+TGG + chr1.2:46615672-46615691 None:intergenic 25.0%
!!! TCAATTTGAGTTGTCATATT+TGG + chr1.2:46615631-46615650 None:intergenic 25.0%
!!! TCATATAAATTTTTTGAGGG+TGG - chr1.2:46615982-46616001 MS.gene034894:intron 25.0%
AATTAACTAGGAACTTACCA+AGG + chr1.2:46615335-46615354 None:intergenic 30.0%
ACTACAAGCCATAATTAAGA+AGG - chr1.2:46616415-46616434 MS.gene034894:intron 30.0%
ACTTACATTCTTTCGACTTA+AGG + chr1.2:46616364-46616383 None:intergenic 30.0%
AGGATTTAAGAGAATTGTTG+TGG - chr1.2:46616602-46616621 MS.gene034894:CDS 30.0%
AGTGACTGTATTAGAAAGAA+GGG + chr1.2:46615368-46615387 None:intergenic 30.0%
CTACAAGCCATAATTAAGAA+GGG - chr1.2:46616416-46616435 MS.gene034894:intron 30.0%
CTTACATTCTTTCGACTTAA+GGG + chr1.2:46616363-46616382 None:intergenic 30.0%
GGATTTAAGAGAATTGTTGT+GGG - chr1.2:46616603-46616622 MS.gene034894:CDS 30.0%
GTAAGTTTATGGAGATCATT+TGG - chr1.2:46616378-46616397 MS.gene034894:intron 30.0%
GTCGAAAGAATGTAAGTTTA+TGG - chr1.2:46616367-46616386 MS.gene034894:intron 30.0%
TACCACAATTTGTGAATGAT+TGG + chr1.2:46615520-46615539 None:intergenic 30.0%
TAGTGACTGTATTAGAAAGA+AGG + chr1.2:46615369-46615388 None:intergenic 30.0%
TCAAACGTTCCTTAATGTTA+TGG + chr1.2:46616839-46616858 None:intergenic 30.0%
TGATCTCAATTCCAAATACT+TGG + chr1.2:46615497-46615516 None:intergenic 30.0%
TTGAAGATGAATCAAATTGG+TGG + chr1.2:46616577-46616596 None:intergenic 30.0%
TTGATTCATCTTCAAAGCTT+AGG - chr1.2:46616582-46616601 MS.gene034894:CDS 30.0%
! ATTGGTTCAATAAGTTGTTG+TGG + chr1.2:46616719-46616738 None:intergenic 30.0%
! TATAATGAGTTGGAGAAGAA+AGG - chr1.2:46617008-46617027 MS.gene034894:CDS 30.0%
!! ACTATTGCAACTTTGAAATG+AGG + chr1.2:46616673-46616692 None:intergenic 30.0%
!! ATCACTGATTCAATGAAAGA+TGG + chr1.2:46616543-46616562 None:intergenic 30.0%
!! GCTTTGAAGATGAATCAAAT+TGG + chr1.2:46616580-46616599 None:intergenic 30.0%
!! TCACTGATTCAATGAAAGAT+GGG + chr1.2:46616542-46616561 None:intergenic 30.0%
!! TTTTTGAAGGATGATTGAGA+TGG + chr1.2:46615170-46615189 None:intergenic 30.0%
!!! AGACATTTTTTTGGATGACT+TGG + chr1.2:46615663-46615682 None:intergenic 30.0%
!!! TATAAATTTTTTGAGGGTGG+CGG - chr1.2:46615985-46616004 MS.gene034894:intron 30.0%
!!! TTTTTGAGATATTGAGCTAG+TGG + chr1.2:46615933-46615952 None:intergenic 30.0%
CACCAATCATTCACAAATTG+TGG - chr1.2:46615515-46615534 MS.gene034894:CDS 35.0%
CCTTAATGTTATGGCTAGAA+GGG + chr1.2:46616830-46616849 None:intergenic 35.0%
GAAGTTGAACCAAGAAACAA+AGG - chr1.2:46616746-46616765 MS.gene034894:intron 35.0%
GAATGCTGTGTATAATGAGT+TGG - chr1.2:46616998-46617017 MS.gene034894:CDS 35.0%
TATGATTACATGGCCATAGA+TGG - chr1.2:46615742-46615761 MS.gene034894:intron 35.0%
TATGGGATGAACTTTGCATA+TGG - chr1.2:46615571-46615590 MS.gene034894:CDS 35.0%
TCCTTAATGTTATGGCTAGA+AGG + chr1.2:46616831-46616850 None:intergenic 35.0%
TGAAACTATCGAAAATGCCT+AGG + chr1.2:46616791-46616810 None:intergenic 35.0%
! ATTGCTTATGTTTCTGTTGC+TGG - chr1.2:46615709-46615728 MS.gene034894:intron 35.0%
! TAGGCATTTTCGATAGTTTC+AGG - chr1.2:46616790-46616809 MS.gene034894:intron 35.0%
! TTTTTGATAAGCAAGGAGAG+TGG + chr1.2:46616077-46616096 None:intergenic 35.0%
!! CATTTTCGATAGTTTCAGGT+CGG - chr1.2:46616794-46616813 MS.gene034894:intron 35.0%
!!! AGAGTTTTAACTGACTTCCT+TGG - chr1.2:46615315-46615334 MS.gene034894:CDS 35.0%
!!! GCAGTGCTTTTTAAGTAACT+TGG - chr1.2:46615410-46615429 MS.gene034894:CDS 35.0%
!!! TTTTTGGATGACTTGGTTGA+AGG + chr1.2:46615656-46615675 None:intergenic 35.0%
AACTTTGCATATGGTGGTAC+AGG - chr1.2:46615580-46615599 MS.gene034894:CDS 40.0%
AATGCCTAGGATTGTGAATG+TGG + chr1.2:46616778-46616797 None:intergenic 40.0%
CCATACTTCAAATCCTGTTC+GGG + chr1.2:46615556-46615575 None:intergenic 40.0%
CCCATACTTCAAATCCTGTT+CGG + chr1.2:46615557-46615576 None:intergenic 40.0%
CCCTTCTAGCCATAACATTA+AGG - chr1.2:46616827-46616846 MS.gene034894:intron 40.0%
GCTCTCCATGAATCAGATAT+AGG + chr1.2:46615243-46615262 None:intergenic 40.0%
GGTTCAACTTCGTAACAGAT+TGG + chr1.2:46616737-46616756 None:intergenic 40.0%
GTAAGCGATGAGTATACTTG+TGG - chr1.2:46616876-46616895 MS.gene034894:CDS 40.0%
TAATAACATAGTGCCCGAAC+AGG - chr1.2:46615540-46615559 MS.gene034894:CDS 40.0%
TTGAAATGAGGTTTCAGCAG+TGG + chr1.2:46616661-46616680 None:intergenic 40.0%
TTGGCTGCAGAACAAATAAG+AGG + chr1.2:46615478-46615497 None:intergenic 40.0%
TTGTTCTGCAGCCAAGTATT+TGG - chr1.2:46615483-46615502 MS.gene034894:CDS 40.0%
! CCGAACAGGATTTGAAGTAT+GGG - chr1.2:46615554-46615573 MS.gene034894:CDS 40.0%
! TGGTGTGTTCCTTTGTTTCT+TGG + chr1.2:46616758-46616777 None:intergenic 40.0%
AGTTGTTGTGGAGAGCTACA+AGG + chr1.2:46616707-46616726 None:intergenic 45.0%
CACACCACATTCACAATCCT+AGG - chr1.2:46616771-46616790 MS.gene034894:intron 45.0%
CATAACCTTTCCCCGAAAAC+CGG - chr1.2:46615272-46615291 MS.gene034894:CDS 45.0%
CATTCCAACCTGCTTGTGTT+GGG + chr1.2:46616983-46617002 None:intergenic 45.0%
GGGAAAGGTTATGCCATATG+GGG + chr1.2:46615265-46615284 None:intergenic 45.0%
GGGATGAACTTTGCATATGG+TGG - chr1.2:46615574-46615593 MS.gene034894:CDS 45.0%
GGGGAAAGGTTATGCCATAT+GGG + chr1.2:46615266-46615285 None:intergenic 45.0%
GTATCATCGACATCCCAACT+AGG + chr1.2:46616040-46616059 None:intergenic 45.0%
GTCAGTTAAAACTCTGCCGT+CGG + chr1.2:46615310-46615329 None:intergenic 45.0%
GTGGGTGATTTACAACCTCT+TGG - chr1.2:46616621-46616640 MS.gene034894:CDS 45.0%
TACCGAAAGAGAGCCATCTA+TGG + chr1.2:46615758-46615777 None:intergenic 45.0%
! CCCGAACAGGATTTGAAGTA+TGG - chr1.2:46615553-46615572 MS.gene034894:CDS 45.0%
! GGAGACTCGTATGTTGATAG+TGG - chr1.2:46615204-46615223 MS.gene034894:CDS 45.0%
AGGATGATTGAGATGGCGAG+TGG + chr1.2:46615163-46615182 None:intergenic 50.0%
CAGTTACACCCAACACAAGC+AGG - chr1.2:46616972-46616991 MS.gene034894:CDS 50.0%
CATCGACATCCCAACTAGGT+TGG + chr1.2:46616036-46616055 None:intergenic 50.0%
CGGGGAAAGGTTATGCCATA+TGG + chr1.2:46615267-46615286 None:intergenic 50.0%
GAGAGTGGACAAGCATCAAG+CGG + chr1.2:46616062-46616081 None:intergenic 50.0%
GATTCATGGAGAGCCCCATA+TGG - chr1.2:46615249-46615268 MS.gene034894:CDS 50.0%
GCATTCCAACCTGCTTGTGT+TGG + chr1.2:46616984-46617003 None:intergenic 50.0%
GCTTGAGGAAGACAACCAAG+AGG + chr1.2:46616639-46616658 None:intergenic 50.0%
GGCCATAGATGGCTCTCTTT+CGG - chr1.2:46615753-46615772 MS.gene034894:intron 50.0%
TACACCCAACACAAGCAGGT+TGG - chr1.2:46616976-46616995 MS.gene034894:CDS 50.0%
!! AGAATCTTCCGGCCGGTTTT+CGG + chr1.2:46615287-46615306 None:intergenic 50.0%
!!! TTTTTTGAGGGTGGCGGCAT+AGG - chr1.2:46615991-46616010 MS.gene034894:intron 50.0%
GAGGTTTCAGCAGTGGCTTG+AGG + chr1.2:46616654-46616673 None:intergenic 55.0%
TCTGCCGTCGGAGAATCTTC+CGG + chr1.2:46615298-46615317 None:intergenic 55.0%
! CGTTTGAAGCCATGCTGCGT+CGG - chr1.2:46616852-46616871 MS.gene034894:intron 55.0%
!! AATCTTCCGGCCGGTTTTCG+GGG + chr1.2:46615285-46615304 None:intergenic 55.0%
!! CATAGGATGGAGGTGTCTCG+GGG - chr1.2:46616008-46616027 MS.gene034894:intron 55.0%
!! GAATCTTCCGGCCGGTTTTC+GGG + chr1.2:46615286-46615305 None:intergenic 55.0%
!! GCATAGGATGGAGGTGTCTC+GGG - chr1.2:46616007-46616026 MS.gene034894:intron 55.0%
!! GGCATAGGATGGAGGTGTCT+CGG - chr1.2:46616006-46616025 MS.gene034894:intron 55.0%
ACCTTTCCCCGAAAACCGGC+CGG - chr1.2:46615276-46615295 MS.gene034894:CDS 60.0%
TCGCTTACACCGACGCAGCA+TGG + chr1.2:46616864-46616883 None:intergenic 60.0%
! CTCGGGGTGCCAACCTAGTT+GGG - chr1.2:46616024-46616043 MS.gene034894:intron 60.0%
! TCTCGGGGTGCCAACCTAGT+TGG - chr1.2:46616023-46616042 MS.gene034894:intron 60.0%
! TTGAGGGTGGCGGCATAGGA+TGG - chr1.2:46615995-46616014 MS.gene034894:intron 60.0%
CCGGCCGGAAGATTCTCCGA+CGG - chr1.2:46615291-46615310 MS.gene034894:CDS 65.0%
CCGTCGGAGAATCTTCCGGC+CGG + chr1.2:46615294-46615313 None:intergenic 65.0%
! AGGGTGGCGGCATAGGATGG+AGG - chr1.2:46615998-46616017 MS.gene034894:intron 65.0%
!! TCCGGCCGGTTTTCGGGGAA+AGG + chr1.2:46615280-46615299 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 46615141 46617052 46615141 ID=MS.gene034894
chr1.2 mRNA 46615141 46617052 46615141 ID=MS.gene034894.t1;Parent=MS.gene034894
chr1.2 exon 46616857 46617052 46616857 ID=MS.gene034894.t1.exon1;Parent=MS.gene034894.t1
chr1.2 CDS 46616857 46617052 46616857 ID=cds.MS.gene034894.t1;Parent=MS.gene034894.t1
chr1.2 exon 46616419 46616699 46616419 ID=MS.gene034894.t1.exon2;Parent=MS.gene034894.t1
chr1.2 CDS 46616419 46616699 46616419 ID=cds.MS.gene034894.t1;Parent=MS.gene034894.t1
chr1.2 exon 46615141 46615659 46615141 ID=MS.gene034894.t1.exon3;Parent=MS.gene034894.t1
chr1.2 CDS 46615141 46615659 46615141 ID=cds.MS.gene034894.t1;Parent=MS.gene034894.t1
Gene Sequence

>MS.gene034894

ATGGAGATGCAAGTTAAGGCCACTCGCCATCTCAATCATCCTTCAAAAAAATTGTTTGTTTTCGGAGACTCGTATGTTGATAGTGGCAACACCATAAAACCTATATCTGATTCATGGAGAGCCCCATATGGCATAACCTTTCCCCGAAAACCGGCCGGAAGATTCTCCGACGGCAGAGTTTTAACTGACTTCCTTGGTAAGTTCCTAGTTAATTAATTAATTTACCCTTCTTTCTAATACAGTCACTATCAATTGAAACACTACAAAGTGCAGTGCTTTTTAAGTAACTTGGTTTATTTTTTTTTAACGTAAGTAATTGGAATTAATGATGCTTCCTCTTATTTGTTCTGCAGCCAAGTATTTGGAATTGAGATCACCAATCATTCACAAATTGTGGTATAATAACATAGTGCCCGAACAGGATTTGAAGTATGGGATGAACTTTGCATATGGTGGTACAGGTGTATTTGATACATTTTCTTCAGGACCAAATATGACAACTCAAATTGATTCCTTCAACCAAGTCATCCAAAAAAATGTCTATACTCTCTCAGATATCACCAATTCTATTGCTTATGTTTCTGTTGCTGGAAATGACTACTATGATTACATGGCCATAGATGGCTCTCTTTCGGTAATTTTAATCATCATACTTTCTATATTTCTATGATGTAAAGTATGAAACTCAAAACAGAAAATTTAAAATTTAAAAACATAAATTATATATTCTTTATAATGATGATGATGATAATAATTTAATTATAAAAAATTTAAAATAAATAGTGTGTACCACTAGCTCAATATCTCAAAAATATAAAGATAAAAGACTCATATAAAAGACTCATATAAATTTTTTGAGGGTGGCGGCATAGGATGGAGGTGTCTCGGGGTGCCAACCTAGTTGGGATGTCGATGATACCGCTTGATGCTTGTCCACTCTCCTTGCTTATCAAAAAAAAAATGCTATAGACATCTCAAAAAAATAAAGATAAAAAAACTCATATAGTAAACAACTATGCTATAGACATCTAAAAAAAATAAAGATAAAAAACTTAAATAGTAAACAACTATGCTATAGACATCTCAAAAAAAAAAATGCTACAGAGATAAGATTAAATACAAGTTAGGAAGAAATGTATTTTTAGGAAAAAAAAAATGAAAATAAACTTTTGAAATTATACATCCAAGAATGGAAAGAGAAAAATAGAAAGTAAATTAACCCTTAAGTCGAAAGAATGTAAGTTTATGGAGATCATTTGGAAACTTACTGAAAAACTACAAGCCATAATTAAGAAGGGTTTCTAAAAAGAATAAAATTGCACTAATTTTTTCATCTATTACTTTACATATTATAAATGAATTTTAACAATTTAATTTCATTGAATAAACGCAGGGTTTCCCATCTTTCATTGAATCAGTGATTAAACAAATAACCACCAATTTGATTCATCTTCAAAGCTTAGGATTTAAGAGAATTGTTGTGGGTGATTTACAACCTCTTGGTTGTCTTCCTCAAGCCACTGCTGAAACCTCATTTCAAAGTTGCAATAGTACATTTAATGACCTTGTAGCTCTCCACAACAACTTATTGAACCAATCTGTTACGAAGTTGAACCAAGAAACAAAGGAACACACCACATTCACAATCCTAGGCATTTTCGATAGTTTCAGGTCGGTGTTGAATCACCCTTCTAGCCATAACATTAAGGAACGTTTGAAGCCATGCTGCGTCGGTGTAAGCGATGAGTATACTTGTGGAAGTGTAGATTCTGAACATACTTCTAATAAATATTTGGTTTGTGAAAATATTGAATCAACTTTCTTTTGGGATCAGTTACACCCAACACAAGCAGGTTGGAATGCTGTGTATAATGAGTTGGAGAAGAAAGGCCTTCATCAAATTTTATACTAG
Protein sequence

>MS.gene034894.t1

MEMQVKATRHLNHPSKKLFVFGDSYVDSGNTIKPISDSWRAPYGITFPRKPAGRFSDGRVLTDFLAKYLELRSPIIHKLWYNNIVPEQDLKYGMNFAYGGTGVFDTFSSGPNMTTQIDSFNQVIQKNVYTLSDITNSIAYVSVAGNDYYDYMAIDGSLSGFPSFIESVIKQITTNLIHLQSLGFKRIVVGDLQPLGCLPQATAETSFQSCNSTFNDLVALHNNLLNQSVTKLNQETKEHTTFTILGIFDSFRSVLNHPSSHNIKERLKPCCVGVSDEYTCGSVDSEHTSNKYLVCENIESTFFWDQLHPTQAGWNAVYNELEKKGLHQILY