AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene035117


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035117.t1 MTR_7g033165 97.324 299 8 0 1 299 1 299 0.0 605
MS.gene035117.t1 MTR_7g033165 97.324 299 8 0 1 299 1 299 0.0 603
MS.gene035117.t1 MTR_7g087190 56.827 271 112 4 26 294 36 303 7.55e-103 306
MS.gene035117.t1 MTR_1g030220 55.137 292 124 4 8 297 14 300 1.67e-100 300
MS.gene035117.t1 MTR_8g089805 51.370 292 138 3 7 297 14 302 1.70e-100 300
MS.gene035117.t1 MTR_6g007095 52.427 309 128 6 1 299 4 303 1.40e-99 307
MS.gene035117.t1 MTR_6g007095 51.136 264 113 4 41 299 378 630 1.17e-80 258
MS.gene035117.t1 MTR_7g033155 50.955 314 135 5 1 296 4 316 2.79e-99 297
MS.gene035117.t1 MTR_6g007090 49.675 308 134 6 3 299 4 301 3.13e-98 294
MS.gene035117.t1 MTR_7g033150 50.000 296 140 3 7 295 7 301 3.40e-98 294
MS.gene035117.t1 MTR_1g030340 52.381 294 131 5 5 296 16 302 1.25e-93 283
MS.gene035117.t1 MTR_6g007100 48.485 297 144 4 3 299 4 291 8.04e-93 280
MS.gene035117.t1 MTR_1g030275 51.673 269 124 3 28 295 34 297 4.41e-90 273
MS.gene035117.t1 MTR_1g030268 52.399 271 123 3 28 297 35 300 9.49e-90 270
MS.gene035117.t1 MTR_8g038680 48.355 304 137 8 3 299 4 294 1.03e-89 272
MS.gene035117.t1 MTR_1g030268 52.399 271 123 3 28 297 35 300 1.01e-88 270
MS.gene035117.t1 MTR_8g012540 47.039 304 141 7 3 299 4 294 6.50e-88 266
MS.gene035117.t1 MTR_1g030230 52.060 267 122 3 32 297 31 292 1.60e-86 264
MS.gene035117.t1 MTR_7g116870 41.281 281 153 4 8 286 9 279 4.28e-74 232
MS.gene035117.t1 MTR_7g113860 42.657 286 149 6 12 295 15 287 8.05e-72 226
MS.gene035117.t1 MTR_8g089805 50.000 218 105 3 81 297 20 234 8.29e-72 224
MS.gene035117.t1 MTR_8g028160 39.610 308 165 7 8 297 10 314 2.38e-71 225
MS.gene035117.t1 MTR_7g113860 41.297 293 160 8 6 295 10 293 5.52e-69 219
MS.gene035117.t1 MTR_1g082390 42.593 270 141 8 30 295 28 287 1.17e-66 213
MS.gene035117.t1 MTR_7g111780 42.697 267 130 8 34 295 37 285 4.21e-64 206
MS.gene035117.t1 MTR_1g030265 49.541 218 104 3 81 297 53 265 1.78e-63 204
MS.gene035117.t1 MTR_7g113860 40.826 218 122 4 79 295 8 219 3.34e-49 166
MS.gene035117.t1 MTR_7g111780 41.584 202 97 6 97 295 3 186 3.03e-43 149
MS.gene035117.t1 MTR_2g079090 30.796 289 180 6 6 286 3 279 2.08e-35 131
MS.gene035117.t1 MTR_2g079080 30.796 289 180 6 6 286 3 279 4.53e-35 130
MS.gene035117.t1 MTR_2g043980 35.235 298 153 10 5 288 15 286 8.32e-35 129
MS.gene035117.t1 MTR_0029s0050 30.612 294 181 7 1 286 1 279 6.13e-34 127
MS.gene035117.t1 MTR_0029s0100 30.612 294 181 7 1 286 1 279 6.26e-34 127
MS.gene035117.t1 MTR_3g448360 33.566 286 173 7 9 286 3 279 1.07e-33 127
MS.gene035117.t1 MTR_2g015650 33.209 268 159 5 31 288 29 286 4.59e-33 125
MS.gene035117.t1 MTR_2g015580 31.930 285 169 8 25 295 39 312 1.48e-32 124
MS.gene035117.t1 MTR_3g463960 32.867 286 167 7 28 297 39 315 9.15e-32 122
MS.gene035117.t1 MTR_3g463950 32.867 286 167 7 28 297 39 315 9.15e-32 122
MS.gene035117.t1 MTR_3g463970 32.867 286 167 7 28 297 39 315 9.15e-32 122
MS.gene035117.t1 MTR_3g463940 32.867 286 167 7 28 297 39 315 9.15e-32 122
MS.gene035117.t1 MTR_3g463930 31.228 285 180 5 28 297 39 322 5.17e-31 120
MS.gene035117.t1 MTR_4g104240 29.470 302 186 9 5 295 11 296 2.63e-30 117
MS.gene035117.t1 MTR_3g069780 31.206 282 165 8 31 295 28 297 1.58e-28 112
MS.gene035117.t1 MTR_3g438030 30.877 285 162 8 31 295 28 297 1.96e-28 112
MS.gene035117.t1 MTR_2g015590 30.108 279 174 6 25 292 23 291 6.18e-28 110
MS.gene035117.t1 MTR_2g015590 30.249 281 171 7 25 292 23 291 1.39e-27 110
MS.gene035117.t1 MTR_2g015630 29.434 265 163 9 38 288 36 290 1.18e-26 108
MS.gene035117.t1 MTR_2g015670 31.579 266 152 8 31 288 29 272 2.30e-26 107
MS.gene035117.t1 MTR_3g069520 30.363 303 188 8 6 295 3 295 1.32e-25 105
MS.gene035117.t1 MTR_2g043990 33.221 298 137 11 5 288 77 326 2.15e-25 103
MS.gene035117.t1 MTR_5g074270 27.796 313 191 10 1 299 1 292 2.42e-25 104
MS.gene035117.t1 MTR_1g082410 30.690 290 110 10 30 293 27 251 3.22e-24 100
MS.gene035117.t1 MTR_8g031430 30.483 269 159 7 33 295 37 283 1.61e-23 99.0
MS.gene035117.t1 MTR_1g025720 28.896 308 180 12 6 295 5 291 1.69e-23 99.0
MS.gene035117.t1 MTR_8g031420 30.996 271 155 8 33 295 35 281 2.89e-23 98.2
MS.gene035117.t1 MTR_1g025700 28.571 308 184 12 1 297 24 306 1.04e-22 97.1
MS.gene035117.t1 MTR_3g052480 28.975 283 161 12 32 296 32 292 1.76e-22 96.3
MS.gene035117.t1 MTR_8g012520 36.154 130 49 2 169 298 7 102 2.62e-22 90.9
MS.gene035117.t1 MTR_2g044100 27.972 286 170 11 5 275 11 275 5.36e-22 95.1
MS.gene035117.t1 MTR_8g079050 29.260 311 175 13 7 295 11 298 9.60e-22 94.4
MS.gene035117.t1 MTR_5g009100 29.348 276 154 13 37 295 50 301 1.66e-21 93.6
MS.gene035117.t1 MTR_8g031390 29.151 271 159 9 33 295 37 282 2.04e-21 92.4
MS.gene035117.t1 MTR_3g052490 30.634 284 158 12 32 298 31 292 2.70e-21 92.8
MS.gene035117.t1 MTR_8g087870 28.374 289 174 10 6 284 7 272 3.23e-21 92.4
MS.gene035117.t1 MTR_8g022810 28.028 289 168 9 1 275 10 272 3.32e-21 92.8
MS.gene035117.t1 MTR_3g052580 28.846 312 176 14 1 295 2 284 3.88e-21 92.8
MS.gene035117.t1 MTR_3g052580 28.846 312 176 14 1 295 1 283 4.38e-21 92.8
MS.gene035117.t1 MTR_8g031390 29.151 271 159 9 33 295 37 282 6.09e-21 92.0
MS.gene035117.t1 MTR_1g025680 28.105 306 186 12 4 296 6 290 1.81e-20 91.3
MS.gene035117.t1 MTR_8g022810 30.738 244 135 8 1 230 10 233 1.93e-20 90.1
MS.gene035117.t1 MTR_8g022790 31.343 268 150 8 33 288 37 282 2.16e-20 90.5
MS.gene035117.t1 MTR_0009s0250 28.472 288 155 13 32 297 32 290 5.01e-20 89.4
MS.gene035117.t1 MTR_5g093090 28.723 282 160 11 32 295 27 285 2.17e-19 86.7
MS.gene035117.t1 MTR_8g014910 27.476 313 177 13 4 298 9 289 2.36e-19 87.4
MS.gene035117.t1 MTR_3g114090 27.157 313 192 11 3 298 1 294 2.84e-19 87.0
MS.gene035117.t1 MTR_2g461580 30.741 270 149 10 32 286 30 276 3.05e-19 87.0
MS.gene035117.t1 MTR_3g021460 29.478 268 151 9 32 284 30 274 3.21e-19 87.0
MS.gene035117.t1 MTR_8g031400 28.571 308 178 9 3 292 6 289 3.60e-19 87.0
MS.gene035117.t1 MTR_5g093090 28.723 282 160 11 32 295 27 285 3.62e-19 87.0
MS.gene035117.t1 MTR_2g100620 31.159 276 154 12 32 293 30 283 5.98e-19 86.3
MS.gene035117.t1 MTR_1g025760 26.299 308 192 11 4 297 51 337 6.04e-19 86.7
MS.gene035117.t1 MTR_4g122200 26.452 310 177 12 3 295 15 290 1.01e-18 85.5
MS.gene035117.t1 MTR_3g082830 28.520 277 168 11 28 293 33 290 1.57e-18 85.1
MS.gene035117.t1 MTR_2g033930 28.803 309 180 15 3 297 5 287 5.43e-18 83.6
MS.gene035117.t1 MTR_4g056160 27.476 313 176 12 1 294 1 281 6.38e-18 83.2
MS.gene035117.t1 MTR_8g074560 26.045 311 185 10 7 295 5 292 9.04e-18 82.8
MS.gene035117.t1 MTR_1g030262 60.714 56 22 0 26 81 29 84 2.04e-17 76.3
MS.gene035117.t1 MTR_1g024890 31.395 258 140 12 33 275 32 267 2.80e-17 81.6
MS.gene035117.t1 MTR_3g098270 29.577 284 162 10 20 286 21 283 3.46e-17 81.3
MS.gene035117.t1 MTR_5g084750 25.974 308 189 11 1 294 1 283 3.51e-17 81.3
MS.gene035117.t1 MTR_5g078210 29.749 279 152 13 35 295 27 279 4.00e-17 80.5
MS.gene035117.t1 MTR_5g078210 29.391 279 153 12 35 295 27 279 4.37e-17 80.9
MS.gene035117.t1 MTR_2g017875 26.022 269 169 10 32 288 33 283 7.96e-17 80.1
MS.gene035117.t1 MTR_5g084770 28.519 270 156 13 32 286 27 274 1.48e-16 79.3
MS.gene035117.t1 MTR_4g056280 27.483 302 185 12 3 293 4 282 2.76e-16 78.6
MS.gene035117.t1 MTR_2g084585 26.299 308 175 12 5 294 10 283 2.81e-16 78.6
MS.gene035117.t1 MTR_5g022640 25.484 310 179 12 7 295 20 298 4.31e-16 78.2
MS.gene035117.t1 MTR_3g435540 28.364 275 158 11 37 295 27 278 6.86e-16 77.4
MS.gene035117.t1 MTR_5g084790 26.471 272 166 9 28 286 27 277 9.95e-16 77.0
MS.gene035117.t1 MTR_1g079540 28.826 281 161 12 33 297 31 288 1.20e-15 76.6
MS.gene035117.t1 MTR_7g116500 28.618 304 178 12 8 295 8 288 1.35e-15 76.6
MS.gene035117.t1 MTR_8g075220 25.965 285 170 11 30 295 37 299 2.03e-15 76.3
MS.gene035117.t1 MTR_0565s0010 27.138 269 163 9 32 287 31 279 2.33e-15 75.9
MS.gene035117.t1 MTR_2g033920 28.159 277 178 8 26 295 28 290 2.74e-15 75.1
MS.gene035117.t1 MTR_1g025780 26.490 302 189 12 5 295 15 294 5.36e-15 74.7
MS.gene035117.t1 MTR_2g033920 28.159 277 178 8 26 295 28 290 5.73e-15 74.7
MS.gene035117.t1 MTR_1g025910 28.710 310 172 15 5 295 10 289 5.92e-15 74.7
MS.gene035117.t1 MTR_8g087890 26.909 275 171 10 32 295 30 285 6.68e-15 74.7
MS.gene035117.t1 MTR_4g019880 27.184 309 178 15 6 297 13 291 1.82e-14 73.2
MS.gene035117.t1 MTR_4g087985 25.566 309 184 12 13 298 16 301 1.99e-14 73.2
MS.gene035117.t1 MTR_2g058390 44.444 63 34 1 166 227 7 69 2.05e-14 67.4
MS.gene035117.t1 MTR_7g116510 28.428 299 169 14 19 297 10 283 2.43e-14 72.8
MS.gene035117.t1 MTR_4g035353 24.262 305 199 11 2 295 3 286 2.81e-14 72.8
MS.gene035117.t1 MTR_2g017955 26.909 275 166 9 5 268 10 260 3.13e-14 72.8
MS.gene035117.t1 MTR_7g116520 29.066 289 158 14 3 275 12 269 4.14e-14 72.4
MS.gene035117.t1 MTR_1g092760 26.538 260 152 7 34 288 40 265 5.41e-14 72.0
MS.gene035117.t1 MTR_3g024510 26.710 307 186 10 1 295 13 292 5.57e-14 72.0
MS.gene035117.t1 MTR_3g005650 24.742 291 183 8 2 284 7 269 6.92e-14 71.6
MS.gene035117.t1 MTR_8g075230 28.114 281 160 12 32 295 35 290 1.61e-13 70.5
MS.gene035117.t1 MTR_8g012460 44.737 76 38 3 185 259 39 111 2.23e-13 65.9
MS.gene035117.t1 MTR_3g114120 26.978 278 173 10 27 293 41 299 5.50e-13 68.9
MS.gene035117.t1 MTR_1g069175 25.890 309 183 12 8 298 13 293 6.44e-13 68.9
MS.gene035117.t1 MTR_5g087690 23.723 274 182 7 31 297 48 301 7.11e-13 68.6
MS.gene035117.t1 MTR_2g017925 25.820 244 153 9 32 265 32 257 1.50e-12 67.8
MS.gene035117.t1 MTR_8g074570 25.733 307 177 12 9 293 14 291 4.42e-12 66.2
MS.gene035117.t1 MTR_1g092690 23.596 267 168 7 34 297 52 285 2.53e-11 63.9
MS.gene035117.t1 MTR_2g015080 24.675 308 189 14 13 297 17 304 3.34e-11 63.5
MS.gene035117.t1 MTR_1g079530 29.259 270 154 14 33 287 29 276 7.30e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035117.t1 AT5G14450 69.595 296 89 1 3 297 10 305 4.35e-153 434
MS.gene035117.t1 AT3G26430 51.007 298 140 4 1 297 1 293 8.29e-104 308
MS.gene035117.t1 AT1G67830 52.941 272 124 3 29 299 26 294 4.04e-96 288
MS.gene035117.t1 AT3G27950 51.613 279 125 3 21 297 20 290 1.82e-94 284
MS.gene035117.t1 AT1G54790 41.980 293 155 6 5 295 11 290 3.26e-72 228
MS.gene035117.t1 AT1G56670 43.197 294 146 8 11 296 13 293 4.39e-71 222
MS.gene035117.t1 AT1G56670 43.197 294 146 8 11 296 13 293 1.34e-69 220
MS.gene035117.t1 AT4G01130 42.701 274 146 4 29 298 30 296 2.20e-69 218
MS.gene035117.t1 AT4G01130 42.701 274 146 4 29 298 30 296 2.64e-68 217
MS.gene035117.t1 AT1G54790 39.384 292 165 6 6 295 8 289 4.05e-67 214
MS.gene035117.t1 AT1G09390 43.911 271 134 8 32 298 36 292 4.75e-67 214
MS.gene035117.t1 AT1G54790 39.384 292 165 6 6 295 8 289 9.38e-67 214
MS.gene035117.t1 AT3G62280 41.111 270 139 6 32 297 35 288 1.72e-60 194
MS.gene035117.t1 AT3G05180 41.481 270 144 8 31 295 34 294 1.20e-59 195
MS.gene035117.t1 AT3G62280 41.111 270 139 6 32 297 35 288 1.25e-59 194
MS.gene035117.t1 AT4G01130 38.249 217 123 4 86 298 1 210 8.46e-43 149
MS.gene035117.t1 AT5G45910 32.680 306 172 10 1 288 1 290 5.15e-37 135
MS.gene035117.t1 AT1G28570 29.545 308 186 8 8 294 8 305 2.05e-33 126
MS.gene035117.t1 AT1G28650 31.803 305 179 8 3 292 7 297 1.47e-32 124
MS.gene035117.t1 AT1G28580 29.932 294 189 7 8 292 12 297 1.61e-32 124
MS.gene035117.t1 AT1G28600 31.834 289 177 8 7 286 7 284 4.51e-32 122
MS.gene035117.t1 AT1G31550 30.132 302 182 7 12 294 15 306 7.04e-32 122
MS.gene035117.t1 AT1G31550 30.241 291 183 6 12 292 15 295 7.69e-32 122
MS.gene035117.t1 AT1G28610 29.066 289 181 7 12 288 10 286 1.20e-29 116
MS.gene035117.t1 AT2G27360 29.268 287 189 7 8 286 8 288 1.35e-29 116
MS.gene035117.t1 AT1G28640 30.545 275 166 6 31 292 33 295 1.72e-29 115
MS.gene035117.t1 AT1G28590 29.514 288 182 6 12 288 15 292 2.86e-29 115
MS.gene035117.t1 AT1G28670 31.502 273 163 6 31 290 33 294 9.21e-28 111
MS.gene035117.t1 AT1G28660 30.258 271 168 7 31 290 33 293 2.23e-26 107
MS.gene035117.t1 AT1G28660 30.483 269 169 7 31 290 33 292 2.13e-25 104
MS.gene035117.t1 AT3G48460 28.369 282 166 10 31 295 36 298 1.56e-23 99.4
MS.gene035117.t1 AT3G50400 29.114 316 175 14 6 298 10 299 2.55e-22 95.9
MS.gene035117.t1 AT5G08460 29.010 293 172 12 23 298 38 311 1.35e-21 94.0
MS.gene035117.t1 AT2G23540 28.165 316 179 13 6 295 16 309 1.75e-21 93.6
MS.gene035117.t1 AT1G20132 28.777 278 168 8 32 298 60 318 1.40e-20 91.3
MS.gene035117.t1 AT1G28600 30.882 204 124 6 12 207 10 204 2.20e-20 87.8
MS.gene035117.t1 AT3G14820 29.260 311 181 14 1 298 1 285 2.44e-20 90.1
MS.gene035117.t1 AT1G28610 30.374 214 125 7 12 213 10 211 3.97e-20 87.8
MS.gene035117.t1 AT1G23500 30.714 280 168 11 26 297 28 289 4.89e-20 89.4
MS.gene035117.t1 AT1G20135 27.451 306 180 10 3 295 6 282 7.46e-20 88.6
MS.gene035117.t1 AT4G10950 28.125 288 169 13 27 298 64 329 9.04e-20 89.0
MS.gene035117.t1 AT5G15720 27.698 278 168 11 32 295 29 287 2.01e-19 87.0
MS.gene035117.t1 AT1G71120 27.915 283 151 12 28 292 26 273 2.42e-19 87.4
MS.gene035117.t1 AT5G15720 27.698 278 168 11 32 295 29 287 4.29e-19 86.7
MS.gene035117.t1 AT4G26790 27.817 284 160 12 28 294 23 278 6.92e-19 85.9
MS.gene035117.t1 AT4G26790 27.817 284 160 12 28 294 23 278 6.92e-19 85.9
MS.gene035117.t1 AT1G06990 27.368 285 161 11 31 295 35 293 1.65e-18 85.1
MS.gene035117.t1 AT5G03820 27.273 297 178 12 6 286 6 280 2.31e-18 84.7
MS.gene035117.t1 AT5G40990 31.058 293 153 15 3 275 7 270 2.42e-18 84.7
MS.gene035117.t1 AT5G03820 27.273 297 178 12 6 286 34 308 3.92e-18 84.3
MS.gene035117.t1 AT2G03980 29.329 283 159 13 31 299 41 296 4.35e-18 84.0
MS.gene035117.t1 AT2G03980 29.329 283 159 13 31 299 41 296 4.35e-18 84.0
MS.gene035117.t1 AT2G03980 29.329 283 159 13 31 299 41 296 4.35e-18 84.0
MS.gene035117.t1 AT2G03980 29.329 283 159 13 31 299 41 296 4.35e-18 84.0
MS.gene035117.t1 AT1G73610 27.508 309 173 11 7 295 9 286 6.94e-18 83.2
MS.gene035117.t1 AT2G19050 26.937 271 157 9 32 289 30 272 1.12e-17 81.6
MS.gene035117.t1 AT2G40250 25.817 306 196 8 6 297 9 297 1.19e-17 82.4
MS.gene035117.t1 AT1G59406 26.974 304 185 12 5 297 6 283 1.44e-17 82.4
MS.gene035117.t1 AT1G59030 26.974 304 185 12 5 297 6 283 1.44e-17 82.4
MS.gene035117.t1 AT1G58725 26.974 304 185 12 5 297 6 283 1.44e-17 82.4
MS.gene035117.t1 AT1G71691 27.174 276 166 8 32 295 54 306 1.47e-17 81.6
MS.gene035117.t1 AT5G03810 25.987 304 190 11 6 295 3 285 1.74e-17 82.0
MS.gene035117.t1 AT5G42170 27.758 281 174 9 27 298 44 304 1.80e-17 82.0
MS.gene035117.t1 AT2G19050 26.937 271 157 9 32 289 30 272 1.91e-17 82.0
MS.gene035117.t1 AT2G30220 26.710 307 188 10 4 295 6 290 2.14e-17 81.6
MS.gene035117.t1 AT1G71691 27.174 276 166 8 32 295 54 306 2.42e-17 82.0
MS.gene035117.t1 AT5G22810 26.909 275 168 10 32 292 33 288 3.84e-17 81.3
MS.gene035117.t1 AT2G30310 26.230 305 188 9 8 295 7 291 1.42e-16 79.3
MS.gene035117.t1 AT3G43550 27.419 310 185 13 1 297 1 283 1.69e-16 78.6
MS.gene035117.t1 AT2G19060 26.740 273 157 9 32 289 29 273 1.73e-16 79.0
MS.gene035117.t1 AT4G10950 27.778 288 166 14 27 298 64 325 2.47e-16 79.0
MS.gene035117.t1 AT1G75920 26.241 282 174 12 30 297 26 287 5.65e-16 77.4
MS.gene035117.t1 AT1G28580 26.728 217 148 5 79 292 8 216 8.34e-16 76.6
MS.gene035117.t1 AT2G19010 26.493 268 160 8 32 288 59 300 1.06e-15 77.0
MS.gene035117.t1 AT1G53940 30.350 257 142 10 33 275 39 272 1.27e-15 76.3
MS.gene035117.t1 AT2G19010 26.493 268 160 8 32 288 29 270 1.40e-15 76.6
MS.gene035117.t1 AT1G53940 30.350 257 142 10 33 275 39 272 1.96e-15 76.3
MS.gene035117.t1 AT1G20120 25.442 283 173 10 30 297 75 334 2.03e-15 76.3
MS.gene035117.t1 AT3G14225 29.098 244 150 9 33 265 37 268 2.84e-15 75.9
MS.gene035117.t1 AT1G58520 27.599 279 169 11 30 297 27 283 5.80e-15 74.7
MS.gene035117.t1 AT1G58525 27.599 279 169 11 30 297 27 283 5.80e-15 74.7
MS.gene035117.t1 AT1G53920 25.758 264 162 8 33 285 48 288 6.60e-15 74.7
MS.gene035117.t1 AT2G24560 24.590 305 193 10 8 295 7 291 7.23e-15 73.9
MS.gene035117.t1 AT3G14225 29.098 244 146 8 33 265 37 264 7.31e-15 74.7
MS.gene035117.t1 AT5G03980 24.915 293 156 9 4 288 6 242 9.46e-15 73.9
MS.gene035117.t1 AT2G24560 24.590 305 193 10 8 295 7 291 1.19e-14 73.9
MS.gene035117.t1 AT2G31540 23.871 310 195 9 4 295 6 292 2.49e-14 72.8
MS.gene035117.t1 AT1G54030 26.667 270 142 11 34 288 53 281 4.00e-14 72.0
MS.gene035117.t1 AT1G71250 25.448 279 171 9 32 295 40 296 6.46e-14 71.6
MS.gene035117.t1 AT1G58430 25.407 307 189 11 5 295 10 292 6.77e-14 71.6
MS.gene035117.t1 AT1G54030 27.626 257 130 11 34 275 53 268 8.67e-14 71.6
MS.gene035117.t1 AT2G04570 25.357 280 169 11 32 295 27 282 9.18e-14 71.2
MS.gene035117.t1 AT5G33370 26.909 275 166 12 37 297 34 287 1.40e-13 70.9
MS.gene035117.t1 AT5G33370 26.855 283 172 12 27 295 24 285 1.47e-13 70.5
MS.gene035117.t1 AT3G04290 25.987 304 181 14 7 295 10 284 1.67e-13 70.5
MS.gene035117.t1 AT1G75910 26.316 285 171 12 30 297 25 287 1.74e-13 70.5
MS.gene035117.t1 AT1G29660 25.547 274 176 9 32 295 31 286 2.85e-13 69.7
MS.gene035117.t1 AT5G03610 26.894 264 151 10 34 288 44 274 4.40e-13 69.3
MS.gene035117.t1 AT1G54000 25.746 268 155 10 33 288 36 271 5.19e-13 69.3
MS.gene035117.t1 AT5G45950 25.830 271 177 8 33 297 40 292 9.67e-13 68.2
MS.gene035117.t1 AT1G75880 28.261 276 167 11 32 295 51 307 1.13e-12 68.2
MS.gene035117.t1 AT1G53990 24.828 290 171 10 3 275 2 261 1.14e-12 68.2
MS.gene035117.t1 AT2G04020 27.876 226 128 9 31 242 41 245 1.32e-12 67.0
MS.gene035117.t1 AT1G75920 25.483 259 159 12 53 297 21 259 1.50e-12 67.4
MS.gene035117.t1 AT2G04020 27.103 214 123 7 31 230 41 235 1.66e-12 67.4
MS.gene035117.t1 AT5G45960 25.874 286 167 13 33 297 47 308 3.52e-12 66.6
MS.gene035117.t1 AT5G15720 25.778 225 142 8 80 295 48 256 4.33e-12 66.2
MS.gene035117.t1 AT3G53100 24.415 299 185 11 11 295 12 283 5.80e-12 65.9
MS.gene035117.t1 AT5G45670 24.183 306 197 10 3 295 1 284 6.25e-12 65.9
MS.gene035117.t1 AT1G75890 25.974 308 180 12 7 293 20 300 1.06e-11 65.1
MS.gene035117.t1 AT1G75890 25.974 308 180 12 7 293 49 329 1.07e-11 65.5
MS.gene035117.t1 AT3G14220 24.603 252 152 9 32 275 31 252 1.08e-11 65.1
MS.gene035117.t1 AT1G75880 27.536 276 168 11 32 295 51 306 1.27e-11 65.1
MS.gene035117.t1 AT5G55050 29.066 289 156 13 30 295 36 298 2.09e-11 64.3
MS.gene035117.t1 AT4G16230 26.562 256 138 11 5 241 11 235 3.19e-11 62.8
MS.gene035117.t1 AT1G75890 25.890 309 192 12 7 293 20 313 3.47e-11 63.5
MS.gene035117.t1 AT1G33811 24.549 277 181 9 32 295 33 294 4.74e-11 63.2

Find 65 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAAGGAGGGAGGTCATTT+TGG 0.223386 7.4:-69137446 MS.gene035117:CDS
CCGGCATGGTTTCACGAATT+TGG 0.231772 7.4:+69137938 None:intergenic
ATTCGCCCCATGTCTATAAT+TGG 0.236600 7.4:+69138320 None:intergenic
GTACATCGTGCTTGTAAAAT+AGG 0.257325 7.4:+69137385 None:intergenic
TTTCCTGCAATCTACAACTT+TGG 0.288216 7.4:-69139310 MS.gene035117:CDS
TTCAAATAAGCACTTAAATA+TGG 0.292686 7.4:+69138354 None:intergenic
CAGTGTCCAATTCACCTTCT+TGG 0.302880 7.4:+69138169 None:intergenic
CTTTGACTGCAGAGGCTAAC+TGG 0.317589 7.4:+69137905 None:intergenic
GCTTCTTTCAAGTGAATTGC+TGG 0.327618 7.4:+69138056 None:intergenic
TGTCTCATTCTGCTTTCTAA+TGG 0.328681 7.4:+69138278 None:intergenic
GCGCTCTACACGTTCGATAT+TGG 0.338613 7.4:-69138003 MS.gene035117:CDS
GCTTGGTTCTTGCTTTGAAC+TGG 0.346920 7.4:+69138199 None:intergenic
GATGTTTATGCTGCAAAATA+TGG 0.354894 7.4:-69137231 MS.gene035117:CDS
GTTCCAATTCCTTCACCATA+TGG 0.367872 7.4:-69139247 MS.gene035117:CDS
TGACCATATGGTGAAGGAAT+TGG 0.369059 7.4:+69139244 None:intergenic
CGGCCCCATTGGATGTTTGC+CGG 0.370784 7.4:-69137412 MS.gene035117:CDS
TGAATTCAACAAGAAGCTTA+AGG 0.382113 7.4:-69137307 MS.gene035117:CDS
ACCTTCTTGGTAAAGTTGCT+TGG 0.393923 7.4:+69138182 None:intergenic
CTCATTCTGCTTTCTAATGG+TGG 0.400502 7.4:+69138281 None:intergenic
GTCAAAATGATCTCTCTGTT+GGG 0.407663 7.4:-69137981 MS.gene035117:CDS
TCTCCAAAGTTGTAGATTGC+AGG 0.411215 7.4:+69139307 None:intergenic
AATGAGACAATATTTCAATA+TGG 0.420807 7.4:-69138264 MS.gene035117:CDS
TACATATGTAATTGCAGCCT+CGG 0.424226 7.4:+69137254 None:intergenic
GGTCAAAATGATCTCTCTGT+TGG 0.447482 7.4:-69137982 MS.gene035117:CDS
GCTAACTGGTTAACTATATC+CGG 0.449387 7.4:+69137919 None:intergenic
TGTCTCTACCAAAAGGTTTG+TGG 0.461301 7.4:+69139212 None:intergenic
TTAGCGAACTCCTCGGGCAC+AGG 0.479569 7.4:+69138027 None:intergenic
TGATCTTTAACGCATCCGTA+CGG 0.480273 7.4:+69137345 None:intergenic
GATCTTTAACGCATCCGTAC+GGG 0.481954 7.4:+69137346 None:intergenic
ATACACAACACCGGCCCCAT+TGG 0.488219 7.4:-69137423 MS.gene035117:CDS
TTCACCGGCAAACATCCAAT+GGG 0.494059 7.4:+69137408 None:intergenic
TCAACAAGAAGCTTAAGGAC+AGG 0.503947 7.4:-69137302 MS.gene035117:CDS
ATTTGAATATCAAGAGAGAA+TGG 0.510430 7.4:+69138234 None:intergenic
AGCGCCTTAGCGAACTCCTC+GGG 0.512627 7.4:+69138021 None:intergenic
CGTTAAAGATCAAAATATGA+TGG 0.514282 7.4:-69137334 MS.gene035117:CDS
AGTGCTTATTTGAATTCACT+TGG 0.519001 7.4:-69138345 MS.gene035117:CDS
CCATCACTGTCTCTACCAAA+AGG 0.532120 7.4:+69139205 None:intergenic
TGCTTGTAAAATAGGTTCAC+CGG 0.533640 7.4:+69137393 None:intergenic
CGGCAAACATCCAATGGGGC+CGG 0.546560 7.4:+69137413 None:intergenic
CAACAAGAAGCTTAAGGACA+GGG 0.551832 7.4:-69137301 MS.gene035117:CDS
ACATATGTAATTGCAGCCTC+GGG 0.556326 7.4:+69137255 None:intergenic
CTTGGAACCAATTATAGACA+TGG 0.557960 7.4:-69138327 MS.gene035117:CDS
TACAAGCACGATGTACCAGC+TGG 0.559249 7.4:-69137378 MS.gene035117:CDS
ACCAAGCAACTTTACCAAGA+AGG 0.570918 7.4:-69138183 MS.gene035117:intron
GTTCACCGGCAAACATCCAA+TGG 0.572369 7.4:+69137407 None:intergenic
GGAGACTCAAACTCAGACAC+TGG 0.576619 7.4:-69139289 MS.gene035117:CDS
CCAAATTCGTGAAACCATGC+CGG 0.581203 7.4:-69137938 MS.gene035117:CDS
CTGGTTAACTATATCCGGCA+TGG 0.589293 7.4:+69137924 None:intergenic
GAGCGCCTTAGCGAACTCCT+CGG 0.589809 7.4:+69138020 None:intergenic
ATTCCTTCACCATATGGTCA+AGG 0.594289 7.4:-69139241 MS.gene035117:CDS
AAGCCTTGACCATATGGTGA+AGG 0.598287 7.4:+69139238 None:intergenic
TTGGAACCAATTATAGACAT+GGG 0.615493 7.4:-69138326 MS.gene035117:CDS
TGTGCCCGAGGAGTTCGCTA+AGG 0.616818 7.4:-69138025 MS.gene035117:CDS
TACGGGTCAAAATAGCCAGC+TGG 0.620364 7.4:+69137363 None:intergenic
GCTACTTACTTTGACTGCAG+AGG 0.621603 7.4:+69137897 None:intergenic
AAGCAAGCTTCCTGTGCCCG+AGG 0.621863 7.4:-69138037 MS.gene035117:CDS
ATTGCAGGAAAAGCACAAGA+AGG 0.642451 7.4:+69139322 None:intergenic
AGAATATATACGAACAAGGA+GGG 0.642628 7.4:-69137458 MS.gene035117:CDS
GACTCAAACTCAGACACTGG+TGG 0.659054 7.4:-69139286 MS.gene035117:CDS
CAGAATATATACGAACAAGG+AGG 0.667877 7.4:-69137459 MS.gene035117:CDS
GCTGAGAACAGAACTTCCCG+AGG 0.676539 7.4:-69137271 MS.gene035117:CDS
TTGCAGAATATATACGAACA+AGG 0.685260 7.4:-69137462 MS.gene035117:intron
TGGAACCAATTATAGACATG+GGG 0.695667 7.4:-69138325 MS.gene035117:CDS
ATATATACGAACAAGGAGGG+AGG 0.707854 7.4:-69137455 MS.gene035117:CDS
TCACCGGCAAACATCCAATG+GGG 0.735990 7.4:+69137409 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTGTCATATTTATAAT+AGG + chr7.4:69137569-69137588 None:intergenic 10.0%
!! AAATTGTCATATTTATAATA+GGG + chr7.4:69137568-69137587 None:intergenic 10.0%
!!! ATTATAAATATGACAATTTT+GGG - chr7.4:69137569-69137588 MS.gene035117:intron 10.0%
!!! TATTATAAATATGACAATTT+TGG - chr7.4:69137568-69137587 MS.gene035117:intron 10.0%
!! ATAATTGGAATAAATGTTTA+AGG - chr7.4:69138844-69138863 MS.gene035117:intron 15.0%
!! ATGAAATAAAATAAACTTTG+TGG + chr7.4:69138470-69138489 None:intergenic 15.0%
!! ATTTAGTTAAAAAAATATGG+AGG + chr7.4:69137596-69137615 None:intergenic 15.0%
!! TTTAGTTAAAAAAATATGGA+GGG + chr7.4:69137595-69137614 None:intergenic 15.0%
!!! ATTTGATACTATCTATTTTA+TGG - chr7.4:69137886-69137905 MS.gene035117:intron 15.0%
!!! TATATTTTCATAATCTTTCT+AGG - chr7.4:69137821-69137840 MS.gene035117:intron 15.0%
!! AAACTTAAAATAGCTTATAG+AGG + chr7.4:69137493-69137512 None:intergenic 20.0%
!! AAATAATCAAACGAGTAATA+AGG - chr7.4:69138977-69138996 MS.gene035117:intron 20.0%
!! AACACATTAAATAAAAGGAA+TGG + chr7.4:69138502-69138521 None:intergenic 20.0%
!! AATGAGACAATATTTCAATA+TGG - chr7.4:69138341-69138360 MS.gene035117:CDS 20.0%
!! TTCAAATAAGCACTTAAATA+TGG + chr7.4:69138254-69138273 None:intergenic 20.0%
!!! ACTGTCAAATTTTAAAATAG+AGG - chr7.4:69137741-69137760 MS.gene035117:intron 20.0%
!!! CTGTCAAATTTTAAAATAGA+GGG - chr7.4:69137742-69137761 MS.gene035117:intron 20.0%
!!! TACTTTAAGAAGTATTCTAT+TGG + chr7.4:69138764-69138783 None:intergenic 20.0%
!!! TCTATAAGCTATTTTAAGTT+TGG - chr7.4:69137492-69137511 MS.gene035117:intron 20.0%
!!! TTCCTTTTATTTAATGTGTT+TGG - chr7.4:69138502-69138521 MS.gene035117:intron 20.0%
! ATTTGAATATCAAGAGAGAA+TGG + chr7.4:69138374-69138393 None:intergenic 25.0%
! CATTTATTCCAATTATTCAG+CGG + chr7.4:69138840-69138859 None:intergenic 25.0%
! CGTTAAAGATCAAAATATGA+TGG - chr7.4:69139271-69139290 MS.gene035117:CDS 25.0%
! GACCAAACACATTAAATAAA+AGG + chr7.4:69138507-69138526 None:intergenic 25.0%
! GCATAAGTTTAATATCTTGT+TGG - chr7.4:69138001-69138020 MS.gene035117:CDS 25.0%
! TAAACTCAATAACTGAAATC+CGG - chr7.4:69137962-69137981 MS.gene035117:CDS 25.0%
!! ACATGTTATTCACAACTTTT+CGG + chr7.4:69138814-69138833 None:intergenic 25.0%
!! ATCAATAAGCTAGAAGTATA+TGG - chr7.4:69138094-69138113 MS.gene035117:intron 25.0%
!! ATGGTAGATTATTTGATGAT+GGG - chr7.4:69137647-69137666 MS.gene035117:intron 25.0%
!!! AAGTTTTTTTAGTTCCAATC+TGG - chr7.4:69138919-69138938 MS.gene035117:intron 25.0%
!!! CGTGTTATTCTTGATTTTAT+AGG - chr7.4:69137424-69137443 MS.gene035117:CDS 25.0%
AAATTACACTTTCATCCCTT+AGG - chr7.4:69138869-69138888 MS.gene035117:intron 30.0%
AACTACTAAGTAAAATGAGC+CGG - chr7.4:69138145-69138164 MS.gene035117:intron 30.0%
AGAATATATACGAACAAGGA+GGG - chr7.4:69139147-69139166 MS.gene035117:intron 30.0%
AGTGCTTATTTGAATTCACT+TGG - chr7.4:69138260-69138279 MS.gene035117:CDS 30.0%
ATTTCAAAACCATTCCAGTA+AGG + chr7.4:69139106-69139125 None:intergenic 30.0%
CATGGTAGATTATTTGATGA+TGG - chr7.4:69137646-69137665 MS.gene035117:intron 30.0%
GATGTTTATGCTGCAAAATA+TGG - chr7.4:69139374-69139393 MS.gene035117:CDS 30.0%
TGAATTCAACAAGAAGCTTA+AGG - chr7.4:69139298-69139317 MS.gene035117:CDS 30.0%
TTGCAGAATATATACGAACA+AGG - chr7.4:69139143-69139162 MS.gene035117:intron 30.0%
TTGGAACCAATTATAGACAT+GGG - chr7.4:69138279-69138298 MS.gene035117:CDS 30.0%
TTTCAAAACCATTCCAGTAA+GGG + chr7.4:69139105-69139124 None:intergenic 30.0%
! AAGCTAGAAGTATATGGTTA+TGG - chr7.4:69138100-69138119 MS.gene035117:intron 30.0%
! ATTTTCGCCATTATCAGATT+TGG - chr7.4:69137539-69137558 MS.gene035117:intron 30.0%
! GAAGTATTCTATTGGAACAT+TGG + chr7.4:69138756-69138775 None:intergenic 30.0%
! GCTCATTTTACTTAGTAGTT+AGG + chr7.4:69138145-69138164 None:intergenic 30.0%
! TCCTTATTCTCACAATTTTG+CGG + chr7.4:69137775-69137794 None:intergenic 30.0%
! TGAAAACTTAGTTGCAGTTT+TGG + chr7.4:69137799-69137818 None:intergenic 30.0%
!! GCGATATGTTTTAAATGACA+TGG - chr7.4:69137628-69137647 MS.gene035117:intron 30.0%
ACTACTAAGTAAAATGAGCC+GGG - chr7.4:69138146-69138165 MS.gene035117:intron 35.0%
ACTTTACCAAGAAGGTGAAT+TGG - chr7.4:69138430-69138449 MS.gene035117:intron 35.0%
AGAGGCAGAATAAGAGATAA+GGG + chr7.4:69137475-69137494 None:intergenic 35.0%
ATCCGGTCTGATATATATTG+AGG - chr7.4:69137979-69137998 MS.gene035117:CDS 35.0%
CAGAATATATACGAACAAGG+AGG - chr7.4:69139146-69139165 MS.gene035117:intron 35.0%
CTTGGAACCAATTATAGACA+TGG - chr7.4:69138278-69138297 MS.gene035117:CDS 35.0%
GAAACCCAAACATAACCTAA+GGG + chr7.4:69138887-69138906 None:intergenic 35.0%
GCTAACTGGTTAACTATATC+CGG + chr7.4:69138689-69138708 None:intergenic 35.0%
GTACATCGTGCTTGTAAAAT+AGG + chr7.4:69139223-69139242 None:intergenic 35.0%
GTCAAAATGATCTCTCTGTT+GGG - chr7.4:69138624-69138643 MS.gene035117:intron 35.0%
TACATATGTAATTGCAGCCT+CGG + chr7.4:69139354-69139373 None:intergenic 35.0%
TAGAGGCAGAATAAGAGATA+AGG + chr7.4:69137476-69137495 None:intergenic 35.0%
TATTCTGCAATGAAGTTCAC+TGG + chr7.4:69139133-69139152 None:intergenic 35.0%
TCAACAATCAGTTTCAAGAC+TGG + chr7.4:69138071-69138090 None:intergenic 35.0%
TCATCCCTTAGGTTATGTTT+GGG - chr7.4:69138880-69138899 MS.gene035117:intron 35.0%
TCCGCAAAATTGTGAGAATA+AGG - chr7.4:69137771-69137790 MS.gene035117:intron 35.0%
TGAAACCCAAACATAACCTA+AGG + chr7.4:69138888-69138907 None:intergenic 35.0%
TGCCTCAATATATATCAGAC+CGG + chr7.4:69137984-69138003 None:intergenic 35.0%
TGCTTGTAAAATAGGTTCAC+CGG + chr7.4:69139215-69139234 None:intergenic 35.0%
TGGAACCAATTATAGACATG+GGG - chr7.4:69138280-69138299 MS.gene035117:CDS 35.0%
TGTCATATCACCGTATTTGA+TGG - chr7.4:69137709-69137728 MS.gene035117:intron 35.0%
TGTCTCATTCTGCTTTCTAA+TGG + chr7.4:69138330-69138349 None:intergenic 35.0%
TTCAGATCCTCCATCAAATA+CGG + chr7.4:69137722-69137741 None:intergenic 35.0%
TTCATCCCTTAGGTTATGTT+TGG - chr7.4:69138879-69138898 MS.gene035117:intron 35.0%
TTTCCTGCAATCTACAACTT+TGG - chr7.4:69137295-69137314 MS.gene035117:CDS 35.0%
! AAGCTATCAGTTTTCCGAAA+AGG + chr7.4:69138948-69138967 None:intergenic 35.0%
! GTTATGTTTGGGTTTCACTT+TGG - chr7.4:69138891-69138910 MS.gene035117:intron 35.0%
! TCATTTTGGATACACAACAC+CGG - chr7.4:69139173-69139192 MS.gene035117:intron 35.0%
! TTGTTGGCTAAGAAGTTGTA+AGG - chr7.4:69138017-69138036 MS.gene035117:CDS 35.0%
!! CCATTCTTTAAAACCCTTAC+TGG - chr7.4:69139089-69139108 MS.gene035117:intron 35.0%
!! CTTTAAAACCCTTACTGGAA+TGG - chr7.4:69139094-69139113 MS.gene035117:intron 35.0%
!! GTTTGGCTTAATTGCAGTTT+TGG - chr7.4:69137509-69137528 MS.gene035117:intron 35.0%
!!! CCAGTAAGGGTTTTAAAGAA+TGG + chr7.4:69139092-69139111 None:intergenic 35.0%
ACATATGTAATTGCAGCCTC+GGG + chr7.4:69139353-69139372 None:intergenic 40.0%
ACCAAGCAACTTTACCAAGA+AGG - chr7.4:69138422-69138441 MS.gene035117:intron 40.0%
ACCTTCTTGGTAAAGTTGCT+TGG + chr7.4:69138426-69138445 None:intergenic 40.0%
AGGGAGACCAAATCTGATAA+TGG + chr7.4:69137549-69137568 None:intergenic 40.0%
ATATATACGAACAAGGAGGG+AGG - chr7.4:69139150-69139169 MS.gene035117:intron 40.0%
ATTCCTTCACCATATGGTCA+AGG - chr7.4:69137364-69137383 MS.gene035117:CDS 40.0%
ATTCGCCCCATGTCTATAAT+TGG + chr7.4:69138288-69138307 None:intergenic 40.0%
CAACAAGAAGCTTAAGGACA+GGG - chr7.4:69139304-69139323 MS.gene035117:CDS 40.0%
CATATCACCGTATTTGATGG+AGG - chr7.4:69137712-69137731 MS.gene035117:intron 40.0%
CATGTTCACCGCTGAATAAT+TGG - chr7.4:69138829-69138848 MS.gene035117:intron 40.0%
CTACTAAGTAAAATGAGCCG+GGG - chr7.4:69138147-69138166 MS.gene035117:intron 40.0%
CTCATTCTGCTTTCTAATGG+TGG + chr7.4:69138327-69138346 None:intergenic 40.0%
GGTCAAAATGATCTCTCTGT+TGG - chr7.4:69138623-69138642 MS.gene035117:intron 40.0%
GTTCCAATTCCTTCACCATA+TGG - chr7.4:69137358-69137377 MS.gene035117:CDS 40.0%
TAAATCCACATAGCCAAAGC+CGG + chr7.4:69138186-69138205 None:intergenic 40.0%
TCAACAAGAAGCTTAAGGAC+AGG - chr7.4:69139303-69139322 MS.gene035117:CDS 40.0%
TCTCCAAAGTTGTAGATTGC+AGG + chr7.4:69137301-69137320 None:intergenic 40.0%
TGACCATATGGTGAAGGAAT+TGG + chr7.4:69137364-69137383 None:intergenic 40.0%
TGATCTTTAACGCATCCGTA+CGG + chr7.4:69139263-69139282 None:intergenic 40.0%
TGGAAAAAGCCTTGACCATA+TGG + chr7.4:69137376-69137395 None:intergenic 40.0%
TGTCTCTACCAAAAGGTTTG+TGG + chr7.4:69137396-69137415 None:intergenic 40.0%
! ATTGCAGGAAAAGCACAAGA+AGG + chr7.4:69137286-69137305 None:intergenic 40.0%
! CATTATGTTTAGACCGGCTT+TGG - chr7.4:69138170-69138189 MS.gene035117:intron 40.0%
! GCTTCTTTCAAGTGAATTGC+TGG + chr7.4:69138552-69138571 None:intergenic 40.0%
! TTCCAATCTGGTCTCCTTTT+CGG - chr7.4:69138931-69138950 MS.gene035117:intron 40.0%
!! GGCTTTTTCCACAAACCTTT+TGG - chr7.4:69137385-69137404 MS.gene035117:CDS 40.0%
AAGCCTTGACCATATGGTGA+AGG + chr7.4:69137370-69137389 None:intergenic 45.0%
CAGTGTCCAATTCACCTTCT+TGG + chr7.4:69138439-69138458 None:intergenic 45.0%
CCAAATTCGTGAAACCATGC+CGG - chr7.4:69138667-69138686 MS.gene035117:intron 45.0%
CCATCACTGTCTCTACCAAA+AGG + chr7.4:69137403-69137422 None:intergenic 45.0%
CTGGTTAACTATATCCGGCA+TGG + chr7.4:69138684-69138703 None:intergenic 45.0%
GATCTTTAACGCATCCGTAC+GGG + chr7.4:69139262-69139281 None:intergenic 45.0%
GCTACTTACTTTGACTGCAG+AGG + chr7.4:69138711-69138730 None:intergenic 45.0%
TCAAATGCATTGTGTGGCCT+CGG - chr7.4:69139010-69139029 MS.gene035117:intron 45.0%
TCGCAGTCAAATGCATTGTG+TGG - chr7.4:69139004-69139023 MS.gene035117:intron 45.0%
TTCACCGGCAAACATCCAAT+GGG + chr7.4:69139200-69139219 None:intergenic 45.0%
TTCCGAAAAGGAGACCAGAT+TGG + chr7.4:69138936-69138955 None:intergenic 45.0%
! AACAAGGAGGGAGGTCATTT+TGG - chr7.4:69139159-69139178 MS.gene035117:intron 45.0%
! CCTTTTGGTAGAGACAGTGA+TGG - chr7.4:69137400-69137419 MS.gene035117:CDS 45.0%
! GCTTGGTTCTTGCTTTGAAC+TGG + chr7.4:69138409-69138428 None:intergenic 45.0%
!! TATAATTTATATAATACAAT+TGG - chr7.4:69137863-69137882 MS.gene035117:intron 5.0%
!! TTTATTTAGTTAAAAAAATA+TGG + chr7.4:69137599-69137618 None:intergenic 5.0%
CCGGCATGGTTTCACGAATT+TGG + chr7.4:69138670-69138689 None:intergenic 50.0%
CCGGTCTAAACATAATGCCC+CGG + chr7.4:69138167-69138186 None:intergenic 50.0%
CTTTGACTGCAGAGGCTAAC+TGG + chr7.4:69138703-69138722 None:intergenic 50.0%
GACTCAAACTCAGACACTGG+TGG - chr7.4:69137319-69137338 MS.gene035117:CDS 50.0%
GCGCTCTACACGTTCGATAT+TGG - chr7.4:69138602-69138621 MS.gene035117:intron 50.0%
GGAGACTCAAACTCAGACAC+TGG - chr7.4:69137316-69137335 MS.gene035117:CDS 50.0%
GTTCACCGGCAAACATCCAA+TGG + chr7.4:69139201-69139220 None:intergenic 50.0%
TACAAGCACGATGTACCAGC+TGG - chr7.4:69139227-69139246 MS.gene035117:CDS 50.0%
TACGGGTCAAAATAGCCAGC+TGG + chr7.4:69139245-69139264 None:intergenic 50.0%
TCACCGGCAAACATCCAATG+GGG + chr7.4:69139199-69139218 None:intergenic 50.0%
! CATGGGGCGAATTTTGCAAC+TGG - chr7.4:69138296-69138315 MS.gene035117:CDS 50.0%
! CCGGGGCATTATGTTTAGAC+CGG - chr7.4:69138164-69138183 MS.gene035117:intron 50.0%
! TTAGACCGGCTTTGGCTATG+TGG - chr7.4:69138178-69138197 MS.gene035117:intron 50.0%
!!! GCTGGCTATTTTGACCCGTA+CGG - chr7.4:69139245-69139264 MS.gene035117:CDS 50.0%
ATACACAACACCGGCCCCAT+TGG - chr7.4:69139182-69139201 MS.gene035117:CDS 55.0%
GCTGAGAACAGAACTTCCCG+AGG - chr7.4:69139334-69139353 MS.gene035117:CDS 55.0%
GTAGCGGTCACAGTGTGGTA+GGG - chr7.4:69139032-69139051 MS.gene035117:intron 55.0%
TAGCGGTCACAGTGTGGTAG+GGG - chr7.4:69139033-69139052 MS.gene035117:intron 55.0%
! GGGGCGAATTTTGCAACTGG+TGG - chr7.4:69138299-69138318 MS.gene035117:CDS 55.0%
AAGCAAGCTTCCTGTGCCCG+AGG - chr7.4:69138568-69138587 MS.gene035117:intron 60.0%
AGCGCCTTAGCGAACTCCTC+GGG + chr7.4:69138587-69138606 None:intergenic 60.0%
CGGCAAACATCCAATGGGGC+CGG + chr7.4:69139195-69139214 None:intergenic 60.0%
CGGCCCCATTGGATGTTTGC+CGG - chr7.4:69139193-69139212 MS.gene035117:CDS 60.0%
GAGCGCCTTAGCGAACTCCT+CGG + chr7.4:69138588-69138607 None:intergenic 60.0%
GCATTGTGTGGCCTCGGTAG+CGG - chr7.4:69139016-69139035 MS.gene035117:intron 60.0%
TGTGCCCGAGGAGTTCGCTA+AGG - chr7.4:69138580-69138599 MS.gene035117:intron 60.0%
TTAGCGAACTCCTCGGGCAC+AGG + chr7.4:69138581-69138600 None:intergenic 60.0%
! GGTAGCGGTCACAGTGTGGT+AGG - chr7.4:69139031-69139050 MS.gene035117:intron 60.0%
CCACACTGTGACCGCTACCG+AGG + chr7.4:69139030-69139049 None:intergenic 65.0%
! CCTCGGTAGCGGTCACAGTG+TGG - chr7.4:69139027-69139046 MS.gene035117:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 69137205 69139422 69137205 ID=MS.gene035117
chr7.4 mRNA 69137205 69139422 69137205 ID=MS.gene035117.t1;Parent=MS.gene035117
chr7.4 exon 69139182 69139422 69139182 ID=MS.gene035117.t1.exon1;Parent=MS.gene035117.t1
chr7.4 CDS 69139182 69139422 69139182 ID=cds.MS.gene035117.t1;Parent=MS.gene035117.t1
chr7.4 exon 69138184 69138393 69138184 ID=MS.gene035117.t1.exon2;Parent=MS.gene035117.t1
chr7.4 CDS 69138184 69138393 69138184 ID=cds.MS.gene035117.t1;Parent=MS.gene035117.t1
chr7.4 exon 69137906 69138078 69137906 ID=MS.gene035117.t1.exon3;Parent=MS.gene035117.t1
chr7.4 CDS 69137906 69138078 69137906 ID=cds.MS.gene035117.t1;Parent=MS.gene035117.t1
chr7.4 exon 69137205 69137478 69137205 ID=MS.gene035117.t1.exon4;Parent=MS.gene035117.t1
chr7.4 CDS 69137205 69137478 69137205 ID=cds.MS.gene035117.t1;Parent=MS.gene035117.t1
Gene Sequence

>MS.gene035117

ATGGGGTTAAGTGTAGTGTTTGTTGTGTTCTTCTTCTTTCTATCTTGTGTGAAGTGTGTTGAACTCAAAGACACATCACCTTCTTGTGCTTTTCCTGCAATCTACAACTTTGGAGACTCAAACTCAGACACTGGTGGCATATCAGCTGCATTTGTTCCAATTCCTTCACCATATGGTCAAGGCTTTTTCCACAAACCTTTTGGTAGAGACAGTGATGGTCGTGTTATTCTTGATTTTATAGGTAATAATCTAACTTTTAATACAACACCCTTATCTCTTATTCTGCCTCTATAAGCTATTTTAAGTTTGGCTTAATTGCAGTTTTGGTCTTCATATTTTCGCCATTATCAGATTTGGTCTCCCTATTATAAATATGACAATTTTGGGCCCTCCATATTTTTTTAACTAAATAAAAATCGTGATGCGATATGTTTTAAATGACATGGTAGATTATTTGATGATGGGAAAGATCAACGTTAATGAAATGACATTTCATTTAAAACATGTCATATCACCGTATTTGATGGAGGATCTGAACTGTCAAATTTTAAAATAGAGGGATCAATTCCGCAAAATTGTGAGAATAAGGAGCCAAAACTGCAACTAAGTTTTCAAGTATATTTTCATAATCTTTCTAGGATAGTTTATGAAAACAGCTTATAATTTATATAATACAATTGGATTTGATACTATCTATTTTATGGCGATAGCGATATGCAAATACTATATGCTTGTGCTATGTGAACTGTTATTTTCTTAAACTCAATAACTGAAATCCGGTCTGATATATATTGAGGCATAAGTTTAATATCTTGTTGGCTAAGAAGTTGTAAGGAAACTAAACTGATTGTAGAGTTTAATAACCAGTCTTGAAACTGATTGTTGAAATATCAATAAGCTAGAAGTATATGGTTATGGATGTTGTTAAGCGACGAAACCTAACTACTAAGTAAAATGAGCCGGGGCATTATGTTTAGACCGGCTTTGGCTATGTGGATTTAATTAAAGCTTTGTATTAAAATTGTGCAGCTGAGAAGCTAAAGTTGCCATATTTAAGTGCTTATTTGAATTCACTTGGAACCAATTATAGACATGGGGCGAATTTTGCAACTGGTGGATCCACCATTAGAAAGCAGAATGAGACAATATTTCAATATGGTATAAGTCCATTCTCTCTTGATATTCAAATTGTGCAGTTCAACCAGTTCAAAGCAAGAACCAAGCAACTTTACCAAGAAGGTGAATTGGACACTGCTATGATTCCACAAAGTTTATTTTATTTCATATCTTATAACCATTCCTTTTATTTAATGTGTTTGGTCTTTGTCTGTTTGAAAATTTTAGCCAGCAATTCACTTGAAAGAAGCAAGCTTCCTGTGCCCGAGGAGTTCGCTAAGGCGCTCTACACGTTCGATATTGGTCAAAATGATCTCTCTGTTGGGTTTAGAAAGATGAATTTTGACCAAATTCGTGAAACCATGCCGGATATAGTTAACCAGTTAGCCTCTGCAGTCAAAGTAAGTAGCACTTGTGTGTCTCTACTCTCTACCAATGTTCCAATAGAATACTTCTTAAAGTACTTGTAATTAACTGTGACTTTTGAGCACCGAAAAGTTGTGAATAACATGTTCACCGCTGAATAATTGGAATAAATGTTTAAGGTTAAATTACACTTTCATCCCTTAGGTTATGTTTGGGTTTCACTTTGGCTCTTAAGTTTTTTTAGTTCCAATCTGGTCTCCTTTTCGGAAAACTGATAGCTTAAGTCTCTAAAATAATCAAACGAGTAATAAGGAGAATCGCAGTCAAATGCATTGTGTGGCCTCGGTAGCGGTCACAGTGTGGTAGGGGAGACAACGAAAATCTTGATGTCGCACTCACAGACCATTCTTTAAAACCCTTACTGGAATGGTTTTGAAATCTGACCAGTGAACTTCATTGCAGAATATATACGAACAAGGAGGGAGGTCATTTTGGATACACAACACCGGCCCCATTGGATGTTTGCCGGTGAACCTATTTTACAAGCACGATGTACCAGCTGGCTATTTTGACCCGTACGGATGCGTTAAAGATCAAAATATGATGGCTGTTGAATTCAACAAGAAGCTTAAGGACAGGGTTGTCAAGCTGAGAACAGAACTTCCCGAGGCTGCAATTACATATGTAGATGTTTATGCTGCAAAATATGGACTAATCAGCAATACGAAAAATGAAG

Protein sequence

>MS.gene035117.t1

MGLSVVFVVFFFFLSCVKCVELKDTSPSCAFPAIYNFGDSNSDTGGISAAFVPIPSPYGQGFFHKPFGRDSDGRVILDFIAEKLKLPYLSAYLNSLGTNYRHGANFATGGSTIRKQNETIFQYGISPFSLDIQIVQFNQFKARTKQLYQEASNSLERSKLPVPEEFAKALYTFDIGQNDLSVGFRKMNFDQIRETMPDIVNQLASAVKNIYEQGGRSFWIHNTGPIGCLPVNLFYKHDVPAGYFDPYGCVKDQNMMAVEFNKKLKDRVVKLRTELPEAAITYVDVYAAKYGLISNTKNE