AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene024474


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024474.t1 MTR_7g116870 97.382 382 9 1 1 382 1 381 0.0 765
MS.gene024474.t1 MTR_8g028160 64.675 385 112 5 13 381 11 387 0.0 511
MS.gene024474.t1 MTR_1g030220 41.444 374 207 5 10 376 16 384 1.95e-103 311
MS.gene024474.t1 MTR_1g030340 42.677 396 208 7 1 381 1 392 1.02e-101 306
MS.gene024474.t1 MTR_8g089805 42.779 367 203 4 9 369 15 380 2.06e-100 303
MS.gene024474.t1 MTR_7g033165 41.573 356 193 4 30 376 29 378 7.32e-99 299
MS.gene024474.t1 MTR_7g087190 40.945 381 210 8 9 376 13 391 8.67e-98 296
MS.gene024474.t1 MTR_1g030230 41.979 374 205 5 10 376 8 376 7.48e-97 293
MS.gene024474.t1 MTR_7g033150 39.844 384 203 7 15 378 11 386 7.82e-97 294
MS.gene024474.t1 MTR_1g030275 42.246 374 202 6 10 376 15 381 1.83e-96 293
MS.gene024474.t1 MTR_1g030268 42.328 378 199 9 7 376 16 382 3.88e-96 292
MS.gene024474.t1 MTR_7g033155 40.374 374 191 5 30 378 34 400 3.52e-95 290
MS.gene024474.t1 MTR_7g113860 39.779 362 203 6 16 370 15 368 1.15e-84 262
MS.gene024474.t1 MTR_7g113860 37.831 378 223 6 1 370 1 374 1.28e-83 260
MS.gene024474.t1 MTR_6g007090 36.480 392 219 6 1 376 1 378 2.56e-80 251
MS.gene024474.t1 MTR_1g082390 38.211 369 212 6 5 367 8 366 1.89e-79 248
MS.gene024474.t1 MTR_8g038680 37.403 385 213 10 7 376 1 372 1.69e-76 241
MS.gene024474.t1 MTR_6g007095 36.842 380 209 5 10 371 9 375 4.85e-76 249
MS.gene024474.t1 MTR_6g007095 33.815 346 191 6 42 376 378 696 7.20e-58 200
MS.gene024474.t1 MTR_7g111780 41.341 358 178 12 29 376 29 364 7.99e-76 239
MS.gene024474.t1 MTR_6g007100 36.729 373 210 6 10 376 9 361 6.44e-75 237
MS.gene024474.t1 MTR_1g030265 41.060 302 166 5 82 376 53 349 1.61e-73 233
MS.gene024474.t1 MTR_7g033165 41.606 274 149 3 30 294 29 300 3.51e-73 231
MS.gene024474.t1 MTR_8g089805 40.273 293 168 4 83 369 21 312 4.34e-71 226
MS.gene024474.t1 MTR_1g030268 42.230 296 155 7 7 294 16 303 1.99e-69 221
MS.gene024474.t1 MTR_7g113860 37.037 297 177 4 80 370 8 300 6.38e-63 204
MS.gene024474.t1 MTR_2g015590 35.389 373 211 12 14 372 13 369 1.09e-62 205
MS.gene024474.t1 MTR_2g015580 36.096 374 204 13 14 370 27 382 1.61e-59 198
MS.gene024474.t1 MTR_8g012540 34.571 350 201 10 7 341 1 337 1.21e-57 191
MS.gene024474.t1 MTR_2g015630 35.920 348 188 13 39 368 36 366 9.28e-57 190
MS.gene024474.t1 MTR_2g015650 36.901 355 189 12 32 369 29 365 2.18e-56 189
MS.gene024474.t1 MTR_3g463960 34.091 352 202 10 32 368 42 378 3.13e-53 181
MS.gene024474.t1 MTR_3g463950 34.091 352 202 10 32 368 42 378 3.13e-53 181
MS.gene024474.t1 MTR_3g463970 34.091 352 202 10 32 368 42 378 3.13e-53 181
MS.gene024474.t1 MTR_3g463940 34.091 352 202 10 32 368 42 378 3.13e-53 181
MS.gene024474.t1 MTR_2g043980 32.898 383 212 11 1 369 1 352 4.32e-53 180
MS.gene024474.t1 MTR_7g111780 38.732 284 148 8 98 376 3 265 8.00e-53 176
MS.gene024474.t1 MTR_3g463930 34.540 359 198 12 32 368 42 385 1.92e-52 179
MS.gene024474.t1 MTR_3g069780 34.239 368 206 13 24 373 20 369 8.84e-52 177
MS.gene024474.t1 MTR_0029s0050 33.894 357 197 10 24 368 20 349 1.34e-51 176
MS.gene024474.t1 MTR_2g079090 33.894 357 197 10 24 368 20 349 2.02e-51 176
MS.gene024474.t1 MTR_2g079080 33.894 357 197 10 24 368 20 349 2.57e-51 175
MS.gene024474.t1 MTR_3g438030 33.967 368 207 13 24 373 20 369 2.85e-51 176
MS.gene024474.t1 MTR_3g448360 33.687 377 214 13 10 368 3 361 4.40e-51 175
MS.gene024474.t1 MTR_0029s0100 33.894 357 197 10 24 368 20 349 5.12e-51 174
MS.gene024474.t1 MTR_2g015670 35.057 348 193 11 32 370 29 352 1.30e-50 174
MS.gene024474.t1 MTR_3g069520 34.358 358 201 13 32 373 28 367 4.41e-50 172
MS.gene024474.t1 MTR_4g104240 31.073 354 212 11 32 372 37 371 4.25e-47 165
MS.gene024474.t1 MTR_8g031420 29.787 376 225 11 3 366 2 350 2.95e-42 151
MS.gene024474.t1 MTR_8g022810 31.989 372 201 15 4 354 9 349 7.58e-42 151
MS.gene024474.t1 MTR_2g044100 30.484 351 209 11 28 366 37 364 2.88e-38 142
MS.gene024474.t1 MTR_2g015590 32.313 294 179 9 14 294 13 299 3.22e-38 140
MS.gene024474.t1 MTR_5g009100 26.705 352 217 9 36 373 48 372 7.25e-38 140
MS.gene024474.t1 MTR_8g031390 28.198 344 207 9 34 366 37 351 1.05e-37 140
MS.gene024474.t1 MTR_8g031430 29.532 342 202 10 34 364 37 350 2.22e-37 139
MS.gene024474.t1 MTR_8g031400 28.529 340 212 9 34 366 37 352 1.94e-36 136
MS.gene024474.t1 MTR_8g022790 31.700 347 188 10 34 366 37 348 2.27e-36 135
MS.gene024474.t1 MTR_8g079050 28.307 378 222 14 8 363 10 360 2.93e-36 136
MS.gene024474.t1 MTR_5g074270 30.978 368 195 17 32 376 31 362 6.81e-35 132
MS.gene024474.t1 MTR_1g060490 28.615 325 195 10 33 351 36 329 4.95e-33 126
MS.gene024474.t1 MTR_2g033920 27.714 350 211 9 33 367 34 356 6.06e-33 127
MS.gene024474.t1 MTR_3g024510 27.429 350 214 10 36 372 40 362 8.89e-32 124
MS.gene024474.t1 MTR_3g098270 27.763 371 226 10 9 363 9 353 1.84e-31 123
MS.gene024474.t1 MTR_2g043990 31.803 305 166 10 1 293 63 337 2.45e-31 122
MS.gene024474.t1 MTR_2g033930 27.056 377 233 13 7 367 1 351 8.70e-31 120
MS.gene024474.t1 MTR_4g122200 26.455 378 233 10 5 367 9 356 3.70e-30 119
MS.gene024474.t1 MTR_8g031390 27.483 302 183 8 34 324 37 313 8.02e-30 117
MS.gene024474.t1 MTR_4g035353 27.151 372 228 13 11 367 8 351 1.72e-29 117
MS.gene024474.t1 MTR_0565s0010 25.964 389 223 13 7 371 9 356 1.97e-29 117
MS.gene024474.t1 MTR_2g084585 27.151 372 232 11 1 361 1 344 1.99e-29 117
MS.gene024474.t1 MTR_3g005650 25.995 377 230 11 13 375 11 352 2.41e-29 117
MS.gene024474.t1 MTR_3g052580 26.225 347 222 10 34 368 28 352 3.90e-29 117
MS.gene024474.t1 MTR_3g052580 26.211 351 217 11 34 368 27 351 4.09e-29 117
MS.gene024474.t1 MTR_8g087890 26.053 380 234 13 9 372 7 355 1.45e-28 114
MS.gene024474.t1 MTR_5g022630 28.367 349 209 12 34 367 43 365 1.62e-28 114
MS.gene024474.t1 MTR_7g116520 26.882 372 226 12 7 364 12 351 2.01e-28 114
MS.gene024474.t1 MTR_3g082830 29.254 335 200 15 34 356 38 347 4.36e-28 113
MS.gene024474.t1 MTR_1g060500 26.347 334 201 10 33 352 39 341 4.96e-28 113
MS.gene024474.t1 MTR_8g022810 33.613 238 129 9 4 225 9 233 8.21e-28 112
MS.gene024474.t1 MTR_8g014910 26.975 367 231 12 1 356 2 342 1.33e-27 112
MS.gene024474.t1 MTR_5g087690 25.620 363 216 12 25 371 40 364 1.80e-27 112
MS.gene024474.t1 MTR_2g100620 26.844 339 214 10 34 361 31 346 1.81e-27 111
MS.gene024474.t1 MTR_5g084790 26.844 339 203 13 34 356 32 341 2.71e-27 111
MS.gene024474.t1 MTR_3g052490 25.135 370 236 10 16 368 12 357 3.02e-27 111
MS.gene024474.t1 MTR_1g025760 26.893 383 224 14 2 361 45 394 3.28e-27 111
MS.gene024474.t1 MTR_1g025680 27.297 381 232 14 4 367 2 354 4.03e-27 112
MS.gene024474.t1 MTR_4g056280 26.647 334 210 9 34 356 30 339 7.18e-27 110
MS.gene024474.t1 MTR_3g464730 25.745 369 226 12 7 357 1 339 1.80e-26 108
MS.gene024474.t1 MTR_2g461580 24.935 385 234 11 9 377 6 351 2.34e-26 108
MS.gene024474.t1 MTR_3g052480 24.932 369 227 13 16 363 13 352 2.41e-26 108
MS.gene024474.t1 MTR_1g024890 26.849 365 226 11 14 364 12 349 2.50e-26 108
MS.gene024474.t1 MTR_5g093090 26.629 353 214 11 34 368 28 353 3.10e-26 108
MS.gene024474.t1 MTR_7g116570 26.420 352 216 12 33 368 33 357 3.47e-26 108
MS.gene024474.t1 MTR_3g435540 27.824 363 219 14 14 361 3 337 3.81e-26 108
MS.gene024474.t1 MTR_8g075230 27.378 347 213 12 34 367 36 356 5.20e-26 107
MS.gene024474.t1 MTR_4g087985 27.321 377 223 14 13 363 15 366 6.24e-26 107
MS.gene024474.t1 MTR_1g069175 28.010 382 222 13 5 364 2 352 6.55e-26 107
MS.gene024474.t1 MTR_0009s0250 29.032 310 186 10 8 303 4 293 6.94e-26 107
MS.gene024474.t1 MTR_1g079540 25.876 371 232 13 14 368 11 354 8.19e-26 107
MS.gene024474.t1 MTR_1g025720 27.326 344 200 13 32 357 35 346 8.29e-26 107
MS.gene024474.t1 MTR_1g082410 27.394 376 161 12 22 371 16 305 1.97e-25 105
MS.gene024474.t1 MTR_7g104220 26.994 326 198 12 35 352 43 336 3.80e-25 105
MS.gene024474.t1 MTR_4g056160 27.976 336 202 11 34 354 27 337 5.79e-25 104
MS.gene024474.t1 MTR_4g019880 27.532 385 224 18 1 364 1 351 7.25e-25 104
MS.gene024474.t1 MTR_5g083040 26.667 330 208 12 34 350 32 340 1.28e-24 103
MS.gene024474.t1 MTR_8g075220 26.301 346 217 11 32 362 38 360 1.55e-24 103
MS.gene024474.t1 MTR_1g092740 24.776 335 213 9 23 350 27 329 1.61e-24 103
MS.gene024474.t1 MTR_7g116510 25.490 357 215 13 29 364 17 343 3.72e-24 102
MS.gene024474.t1 MTR_8g087870 26.542 373 209 12 1 355 1 326 3.72e-24 102
MS.gene024474.t1 MTR_5g022640 27.095 358 201 15 34 367 43 364 3.88e-24 102
MS.gene024474.t1 MTR_2g015080 25.858 379 218 16 4 352 7 352 4.59e-24 102
MS.gene024474.t1 MTR_1g025780 27.405 343 204 13 34 361 41 353 6.43e-24 102
MS.gene024474.t1 MTR_1g025700 26.100 341 212 11 34 361 50 363 1.15e-23 101
MS.gene024474.t1 MTR_5g084750 24.471 331 209 12 34 350 30 333 1.73e-23 100
MS.gene024474.t1 MTR_3g114090 29.032 341 198 13 32 356 34 346 1.84e-23 100
MS.gene024474.t1 MTR_5g084770 24.779 339 213 12 34 357 28 339 2.53e-23 100
MS.gene024474.t1 MTR_7g116500 26.648 349 209 12 33 364 32 350 2.56e-23 100
MS.gene024474.t1 MTR_4g108690 25.723 346 217 11 30 361 22 341 3.74e-23 99.8
MS.gene024474.t1 MTR_1g092760 25.588 340 207 13 35 364 40 343 3.96e-23 99.4
MS.gene024474.t1 MTR_1g092750 24.217 351 199 11 35 364 41 345 4.06e-23 99.4
MS.gene024474.t1 MTR_1g025910 28.739 341 195 14 34 361 43 348 7.95e-23 99.0
MS.gene024474.t1 MTR_5g078210 26.205 332 204 12 38 356 29 332 8.83e-23 98.6
MS.gene024474.t1 MTR_2g033920 28.159 277 169 7 33 294 34 295 9.59e-23 97.8
MS.gene024474.t1 MTR_3g023220 24.850 334 199 10 35 355 34 328 1.06e-22 98.2
MS.gene024474.t1 MTR_3g005660 25.138 362 235 9 26 374 28 366 1.13e-22 98.6
MS.gene024474.t1 MTR_3g114120 28.242 347 197 13 34 361 47 360 1.55e-22 98.2
MS.gene024474.t1 MTR_7g008060 25.789 380 219 14 2 364 4 337 2.00e-21 94.7
MS.gene024474.t1 MTR_6g021530 24.425 348 219 10 38 368 33 353 2.46e-21 94.7
MS.gene024474.t1 MTR_3g021460 24.737 380 227 12 9 372 6 342 8.37e-21 92.8
MS.gene024474.t1 MTR_8g074570 25.916 382 234 15 2 363 4 356 1.81e-20 92.0
MS.gene024474.t1 MTR_8g075200 25.073 343 218 11 32 361 39 355 1.98e-20 92.4
MS.gene024474.t1 MTR_1g079530 26.316 380 224 19 12 372 5 347 4.00e-20 90.9
MS.gene024474.t1 MTR_2g017925 27.893 337 195 15 35 360 34 333 1.43e-19 89.7
MS.gene024474.t1 MTR_2g017955 24.619 394 239 13 9 381 13 369 2.33e-19 89.0
MS.gene024474.t1 MTR_2g017965 25.672 335 206 10 35 357 34 337 3.32e-19 88.6
MS.gene024474.t1 MTR_1g060520 23.739 337 170 12 33 352 39 305 4.24e-19 87.4
MS.gene024474.t1 MTR_1g092690 23.148 324 207 12 35 350 52 341 1.34e-18 86.7
MS.gene024474.t1 MTR_5g093090 26.715 277 179 8 34 297 28 293 4.26e-18 84.3
MS.gene024474.t1 MTR_5g074210 31.429 175 99 6 203 376 64 218 4.60e-18 82.8
MS.gene024474.t1 MTR_8g074560 26.053 380 221 15 12 363 5 352 1.60e-17 83.6
MS.gene024474.t1 MTR_2g017875 23.988 346 215 13 35 366 35 346 5.09e-17 82.0
MS.gene024474.t1 MTR_5g078210 26.667 270 171 9 38 294 29 284 6.14e-17 81.3
MS.gene024474.t1 MTR_1g030262 60.345 58 23 0 28 85 30 87 1.51e-16 74.7
MS.gene024474.t1 MTR_0127s0040 23.482 247 161 5 136 374 8 234 1.55e-16 78.6
MS.gene024474.t1 MTR_1108s0010 24.889 225 139 5 135 356 1 198 6.02e-16 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024474.t1 AT4G01130 63.158 380 136 2 1 376 1 380 6.68e-178 500
MS.gene024474.t1 AT4G01130 63.758 298 104 2 1 294 1 298 1.11e-136 393
MS.gene024474.t1 AT4G01130 63.265 294 104 1 87 376 1 294 2.78e-135 388
MS.gene024474.t1 AT3G26430 41.755 376 211 5 8 376 4 378 4.84e-100 302
MS.gene024474.t1 AT5G14450 40.263 380 208 7 13 379 16 389 9.11e-97 294
MS.gene024474.t1 AT1G67830 42.941 340 187 4 30 363 26 364 3.81e-94 286
MS.gene024474.t1 AT1G54790 38.564 376 215 6 6 373 7 374 3.27e-83 259
MS.gene024474.t1 AT1G54790 37.401 377 222 6 7 373 1 373 2.02e-77 244
MS.gene024474.t1 AT1G56670 36.815 383 214 9 3 376 8 371 6.71e-77 242
MS.gene024474.t1 AT3G27950 36.554 383 214 8 9 378 6 372 1.58e-75 239
MS.gene024474.t1 AT1G09390 35.620 379 218 8 6 376 8 368 1.84e-73 233
MS.gene024474.t1 AT1G54790 35.732 403 219 9 7 373 1 399 4.75e-72 231
MS.gene024474.t1 AT3G05180 36.628 344 207 5 31 367 33 372 3.26e-70 225
MS.gene024474.t1 AT3G62280 35.777 341 192 6 35 368 37 357 6.66e-62 203
MS.gene024474.t1 AT1G28580 33.938 386 211 13 7 370 10 373 6.81e-60 199
MS.gene024474.t1 AT1G31550 36.126 382 197 14 11 370 15 371 1.47e-59 198
MS.gene024474.t1 AT5G45910 34.031 382 221 9 7 370 3 371 1.92e-59 197
MS.gene024474.t1 AT1G28600 34.694 392 208 14 1 370 1 366 5.84e-59 196
MS.gene024474.t1 AT1G31550 35.958 381 196 14 11 370 15 368 6.67e-58 193
MS.gene024474.t1 AT2G27360 36.387 382 206 11 8 370 7 370 1.45e-57 192
MS.gene024474.t1 AT1G28590 34.430 395 212 13 1 372 4 374 1.48e-57 193
MS.gene024474.t1 AT1G28640 33.505 388 221 13 5 372 3 373 6.98e-57 191
MS.gene024474.t1 AT1G28650 33.842 393 221 13 1 372 1 375 7.40e-57 191
MS.gene024474.t1 AT1G28610 33.071 381 222 11 6 370 3 366 2.22e-54 184
MS.gene024474.t1 AT1G28670 33.333 387 224 13 5 372 3 374 2.36e-53 181
MS.gene024474.t1 AT1G28570 33.506 385 215 15 7 370 6 370 1.21e-52 180
MS.gene024474.t1 AT1G56670 36.877 301 170 8 3 294 8 297 1.67e-52 177
MS.gene024474.t1 AT1G28660 32.905 389 222 14 5 372 3 373 1.57e-51 177
MS.gene024474.t1 AT1G28660 32.905 389 221 15 5 372 3 372 4.25e-50 173
MS.gene024474.t1 AT3G48460 31.111 360 202 13 32 370 36 370 1.93e-45 160
MS.gene024474.t1 AT3G62280 35.907 259 147 5 35 286 37 283 6.01e-44 154
MS.gene024474.t1 AT1G28580 31.818 308 180 11 77 372 5 294 5.93e-41 147
MS.gene024474.t1 AT3G14225 30.321 343 208 9 34 363 37 361 4.67e-36 135
MS.gene024474.t1 AT5G40990 29.598 348 200 10 34 363 37 357 1.36e-35 134
MS.gene024474.t1 AT3G14225 29.769 346 202 10 34 363 37 357 7.87e-35 132
MS.gene024474.t1 AT1G06990 29.429 350 195 12 32 361 35 352 8.31e-35 132
MS.gene024474.t1 AT1G53920 27.390 387 232 11 1 365 7 366 8.82e-35 132
MS.gene024474.t1 AT5G15720 29.839 372 206 13 22 368 14 355 3.70e-33 127
MS.gene024474.t1 AT5G22810 29.118 340 207 11 34 361 34 351 4.45e-33 127
MS.gene024474.t1 AT2G23540 28.947 380 218 14 10 363 18 371 2.23e-32 125
MS.gene024474.t1 AT4G10950 26.000 350 222 11 34 371 71 395 2.41e-32 126
MS.gene024474.t1 AT1G71691 27.424 361 218 9 19 366 41 370 2.58e-32 125
MS.gene024474.t1 AT3G50400 28.649 370 214 14 25 372 25 366 9.00e-32 124
MS.gene024474.t1 AT2G31540 27.895 380 216 13 1 356 1 346 1.12e-30 120
MS.gene024474.t1 AT1G58430 27.957 372 226 13 1 356 1 346 4.19e-30 119
MS.gene024474.t1 AT2G42990 26.796 362 215 14 13 357 10 338 1.03e-29 117
MS.gene024474.t1 AT1G53940 28.280 343 211 11 34 363 39 359 1.17e-29 118
MS.gene024474.t1 AT4G10950 25.714 350 219 12 34 371 71 391 1.60e-29 118
MS.gene024474.t1 AT5G41890 28.142 366 216 13 21 363 18 359 4.11e-29 116
MS.gene024474.t1 AT5G08460 26.873 387 236 14 1 367 14 373 4.49e-29 116
MS.gene024474.t1 AT1G28570 32.710 214 114 7 166 372 19 209 4.76e-29 113
MS.gene024474.t1 AT1G29670 27.794 349 211 12 36 371 34 354 6.81e-29 115
MS.gene024474.t1 AT5G03610 28.000 350 194 13 35 366 44 353 7.97e-29 115
MS.gene024474.t1 AT1G71120 26.934 349 201 12 34 364 31 343 1.13e-28 115
MS.gene024474.t1 AT1G29670 27.714 350 212 12 36 372 102 423 1.17e-28 116
MS.gene024474.t1 AT1G53990 27.988 343 205 11 34 363 35 348 1.67e-28 114
MS.gene024474.t1 AT4G26790 26.100 341 217 11 32 361 27 343 2.41e-28 114
MS.gene024474.t1 AT4G26790 26.100 341 217 11 32 361 27 343 2.41e-28 114
MS.gene024474.t1 AT1G28570 33.019 212 112 7 166 370 110 298 3.67e-28 112
MS.gene024474.t1 AT2G24560 27.248 367 224 11 1 351 1 340 4.71e-28 113
MS.gene024474.t1 AT2G30310 27.807 374 223 14 1 356 1 345 5.25e-28 113
MS.gene024474.t1 AT2G04570 27.457 346 210 15 34 365 28 346 1.69e-27 111
MS.gene024474.t1 AT1G54030 29.254 335 175 14 33 353 51 337 3.80e-27 112
MS.gene024474.t1 AT5G03980 26.016 369 199 14 1 357 1 307 4.19e-27 110
MS.gene024474.t1 AT2G30220 27.901 362 217 14 11 356 11 344 8.94e-26 107
MS.gene024474.t1 AT1G71691 28.966 290 179 8 19 299 41 312 1.15e-25 105
MS.gene024474.t1 AT3G16370 26.801 347 214 13 34 366 30 350 1.27e-25 106
MS.gene024474.t1 AT1G75880 25.397 378 237 12 4 362 17 368 1.91e-25 106
MS.gene024474.t1 AT1G59406 26.203 374 226 14 6 362 2 342 2.74e-25 105
MS.gene024474.t1 AT1G59030 26.203 374 226 14 6 362 2 342 2.74e-25 105
MS.gene024474.t1 AT1G58725 26.203 374 226 14 6 362 2 342 2.74e-25 105
MS.gene024474.t1 AT1G54020 27.451 357 212 11 15 361 12 331 4.96e-25 105
MS.gene024474.t1 AT5G15720 28.105 306 173 9 81 368 48 324 5.05e-25 104
MS.gene024474.t1 AT3G14820 28.652 356 181 16 34 361 32 342 5.15e-25 104
MS.gene024474.t1 AT1G75880 25.849 383 228 13 4 362 17 367 8.65e-25 104
MS.gene024474.t1 AT5G45670 27.164 335 203 14 36 356 31 338 1.06e-24 103
MS.gene024474.t1 AT5G03820 28.042 378 211 18 11 361 6 349 1.09e-24 103
MS.gene024474.t1 AT4G28780 28.249 354 207 14 33 368 30 354 1.17e-24 103
MS.gene024474.t1 AT1G75890 28.457 376 210 16 13 365 22 361 1.41e-24 103
MS.gene024474.t1 AT2G03980 28.198 344 206 14 29 360 38 352 1.41e-24 103
MS.gene024474.t1 AT2G03980 28.198 344 206 14 29 360 38 352 1.41e-24 103
MS.gene024474.t1 AT2G03980 28.198 344 206 14 29 360 38 352 1.41e-24 103
MS.gene024474.t1 AT2G03980 28.198 344 206 14 29 360 38 352 1.41e-24 103
MS.gene024474.t1 AT1G75890 27.957 372 217 14 13 365 51 390 1.78e-24 103
MS.gene024474.t1 AT5G45950 26.923 338 200 13 34 357 40 344 2.66e-24 102
MS.gene024474.t1 AT1G75900 27.273 341 210 12 34 362 43 357 3.04e-24 102
MS.gene024474.t1 AT1G29660 25.215 349 221 10 36 371 34 355 3.13e-24 102
MS.gene024474.t1 AT1G75890 27.937 383 216 15 13 365 22 374 3.23e-24 103
MS.gene024474.t1 AT5G63170 26.975 367 201 12 7 352 1 321 3.62e-24 102
MS.gene024474.t1 AT5G03820 28.042 378 211 18 11 361 34 377 4.09e-24 102
MS.gene024474.t1 AT3G04290 26.934 349 208 12 33 364 28 346 4.48e-24 102
MS.gene024474.t1 AT5G03600 27.105 380 218 16 3 367 17 352 4.76e-24 102
MS.gene024474.t1 AT5G45960 27.246 345 198 13 28 350 41 354 9.02e-24 101
MS.gene024474.t1 AT1G71250 26.377 345 219 11 34 367 41 361 1.21e-23 101
MS.gene024474.t1 AT1G53940 28.421 285 172 10 34 305 39 304 1.54e-23 99.8
MS.gene024474.t1 AT5G15720 29.252 294 172 10 22 294 14 292 1.59e-23 100
MS.gene024474.t1 AT3G53100 24.798 371 232 13 7 361 4 343 1.61e-23 100
MS.gene024474.t1 AT1G71691 25.253 297 182 7 80 366 3 269 2.77e-23 98.6
MS.gene024474.t1 AT4G18970 24.438 356 232 12 36 378 30 361 3.42e-23 99.8
MS.gene024474.t1 AT5G33370 26.301 346 214 13 33 364 29 347 3.57e-23 99.8
MS.gene024474.t1 AT4G18970 24.438 356 232 12 36 378 30 361 3.81e-23 100
MS.gene024474.t1 AT2G24560 27.964 329 207 9 1 313 1 315 8.01e-23 98.2
MS.gene024474.t1 AT2G19060 27.528 356 205 15 28 368 24 341 9.78e-23 98.6
MS.gene024474.t1 AT1G75930 27.027 370 217 13 13 363 6 341 1.22e-22 98.2
MS.gene024474.t1 AT3G09930 26.686 341 203 14 35 362 40 346 2.28e-22 97.4
MS.gene024474.t1 AT3G09930 26.686 341 203 14 35 362 40 346 2.28e-22 97.4
MS.gene024474.t1 AT1G75920 27.224 371 205 15 15 361 6 335 2.95e-22 97.1
MS.gene024474.t1 AT5G42170 26.163 344 211 13 35 365 51 364 3.97e-22 97.1
MS.gene024474.t1 AT5G03810 25.882 340 209 12 34 361 37 345 4.80e-22 96.7
MS.gene024474.t1 AT5G03600 27.089 347 195 15 35 367 15 317 6.45e-22 95.5
MS.gene024474.t1 AT1G20135 23.118 372 219 11 4 356 3 326 1.45e-21 94.7
MS.gene024474.t1 AT5G18430 26.190 378 224 15 10 368 12 353 1.49e-21 95.1
MS.gene024474.t1 AT2G40250 23.599 339 218 13 34 356 36 349 1.97e-21 94.7
MS.gene024474.t1 AT1G20120 25.588 340 212 12 32 357 76 388 2.36e-21 95.1
MS.gene024474.t1 AT1G74460 26.087 368 219 16 11 361 6 337 4.14e-21 94.0
MS.gene024474.t1 AT1G33811 23.737 396 252 14 7 378 1 370 1.27e-20 92.8
MS.gene024474.t1 AT5G37690 25.680 331 207 11 38 356 31 334 1.75e-20 92.0
MS.gene024474.t1 AT1G54030 34.783 207 96 10 33 226 51 231 1.76e-20 91.3
MS.gene024474.t1 AT1G54000 26.260 377 223 19 1 361 2 339 1.92e-20 92.4
MS.gene024474.t1 AT1G28600 32.420 219 116 9 1 202 1 204 2.17e-20 89.4
MS.gene024474.t1 AT1G54010 25.464 377 226 14 1 361 2 339 3.11e-20 91.7
MS.gene024474.t1 AT2G19050 25.434 346 207 12 36 368 33 340 3.31e-20 91.3
MS.gene024474.t1 AT1G28610 31.250 208 126 6 6 202 3 204 6.83e-20 88.6
MS.gene024474.t1 AT1G75920 26.911 327 181 13 52 361 22 307 1.08e-19 89.4
MS.gene024474.t1 AT1G20130 24.501 351 215 13 34 362 204 526 1.90e-19 90.5
MS.gene024474.t1 AT1G20130 24.501 351 215 13 34 362 184 506 2.46e-19 90.1
MS.gene024474.t1 AT1G58520 25.770 357 208 15 23 362 19 335 9.61e-19 87.0
MS.gene024474.t1 AT1G58525 25.770 357 208 15 23 362 19 335 9.61e-19 87.0
MS.gene024474.t1 AT2G36325 24.419 344 209 12 35 364 48 354 1.16e-18 86.7
MS.gene024474.t1 AT3G43570 23.450 371 211 13 6 362 2 313 1.31e-18 86.3
MS.gene024474.t1 AT1G75920 25.916 382 211 15 15 361 1 345 1.39e-18 86.7
MS.gene024474.t1 AT1G23500 24.852 338 213 11 34 363 35 339 2.55e-18 85.5
MS.gene024474.t1 AT2G19010 25.356 351 201 12 36 368 32 339 3.81e-18 85.1
MS.gene024474.t1 AT2G19010 25.071 351 202 11 36 368 62 369 7.01e-18 84.7
MS.gene024474.t1 AT4G30140 26.239 343 206 13 36 368 35 340 9.46e-18 84.0
MS.gene024474.t1 AT3G43550 26.797 306 186 12 6 294 2 286 1.12e-17 82.8
MS.gene024474.t1 AT2G31550 25.728 206 125 5 159 356 20 205 1.21e-17 81.6
MS.gene024474.t1 AT3G14220 25.369 339 209 10 35 363 33 337 2.06e-17 83.2
MS.gene024474.t1 AT1G20132 24.927 341 209 13 34 357 61 371 2.39e-17 83.2
MS.gene024474.t1 AT3G14210 26.437 348 206 13 27 360 29 340 5.63e-17 82.0
MS.gene024474.t1 AT1G75910 25.434 346 206 14 32 361 26 335 1.13e-16 80.9
MS.gene024474.t1 AT5G37690 24.848 330 203 12 38 356 31 326 4.82e-16 79.0
MS.gene024474.t1 AT5G55050 26.796 362 219 16 27 368 32 367 8.82e-16 78.6
MS.gene024474.t1 AT5G33370 25.352 284 184 11 33 302 29 298 2.05e-15 77.0
MS.gene024474.t1 AT2G19050 26.172 256 161 8 36 281 33 270 2.49e-14 73.2
MS.gene024474.t1 AT1G54020 24.199 281 173 8 85 361 1 245 1.71e-11 64.7
MS.gene024474.t1 AT1G54020 24.199 281 173 8 85 361 1 245 1.71e-11 64.7
MS.gene024474.t1 AT1G54020 24.199 281 173 8 85 361 1 245 1.71e-11 64.7

Find 90 sgRNAs with CRISPR-Local

Find 148 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAACCTATGCTATTCTTAA+TGG 0.135679 7.2:+1219064 MS.gene024474:CDS
AGTTCAGACCTTGACGAATT+TGG 0.191181 7.2:+1218614 MS.gene024474:CDS
CCTGCTGAATCTGGTCCTTA+TGG 0.213684 7.2:+1216979 MS.gene024474:CDS
TCTTGGTGGGAGAACATTTA+TGG 0.217034 7.2:+1218532 MS.gene024474:CDS
ATAAGTTACTCTTACTTTAA+TGG 0.231194 7.2:-1218394 None:intergenic
GTATTTCCACAGTAAACTTT+AGG 0.285895 7.2:-1218938 None:intergenic
CATGCTTGTGTTGCCTTGTT+TGG 0.295105 7.2:+1216864 MS.gene024474:CDS
GGTTGGAAGTGAAATCATTT+TGG 0.297243 7.2:-1218305 None:intergenic
CTGATCAGCTTCTTTAACTT+TGG 0.306393 7.2:-1218064 None:intergenic
AATACTTCTTTGTTTGTCAC+TGG 0.313550 7.2:+1217988 MS.gene024474:CDS
GGAAATACAAAGGAGATAAA+TGG 0.320143 7.2:+1218953 MS.gene024474:CDS
ATTCTGTCAGCTCAAGCTAT+TGG 0.321669 7.2:+1217871 MS.gene024474:intron
GGAGATTCAAATTCAGATAC+TGG 0.325361 7.2:+1216937 MS.gene024474:CDS
GTGACAAACAAAGAAGTATT+AGG 0.332102 7.2:-1217985 None:intergenic
GATCCTATTGATTGTAGATA+TGG 0.334553 7.2:-1217910 None:intergenic
CATTGTGATCTTCAACCTAT+AGG 0.348100 7.2:+1219121 MS.gene024474:CDS
CTTCAAATGGATCAACCTAT+AGG 0.355948 7.2:-1219136 None:intergenic
TATATCTGGTGATGGAAGTT+TGG 0.358262 7.2:-1218250 None:intergenic
TATAAGCTTGCTTGCAGCTT+CGG 0.371154 7.2:-1219044 None:intergenic
TGGTTGCAAATTGTTTCATT+TGG 0.386261 7.2:-1218044 None:intergenic
ACAAAAGCATGTTGTGGATA+TGG 0.389909 7.2:+1218893 MS.gene024474:CDS
AATGAACAATAATATATTCA+TGG 0.395938 7.2:-1216839 None:intergenic
AGATCACAATGTTCCTGAAA+TGG 0.396329 7.2:-1219109 None:intergenic
TATGAAACAGGTCTTCAATA+TGG 0.402022 7.2:+1218869 MS.gene024474:intron
TTCCGGCATCCTACTTCTCA+TGG 0.414441 7.2:+1218770 MS.gene024474:CDS
CTTGTGTTGCCTTGTTTGGT+TGG 0.426360 7.2:+1216868 MS.gene024474:CDS
AGTCCATATCTACAATCAAT+AGG 0.429091 7.2:+1217907 MS.gene024474:CDS
ACTTCCAACCTAGCAGTCAT+TGG 0.432851 7.2:+1218318 MS.gene024474:CDS
TTGAAGTAAGTCATTCCATA+AGG 0.437386 7.2:-1216994 None:intergenic
TCCCAACTCACATAGTTGTA+AGG 0.444412 7.2:-1219007 None:intergenic
CTTCCATCACCAGATATACT+TGG 0.446578 7.2:+1218255 MS.gene024474:CDS
AGCTGAATAGCAAGGGAGAA+AGG 0.454745 7.2:-1218018 None:intergenic
ATACTTCTTTGTTTGTCACT+GGG 0.469378 7.2:+1217989 MS.gene024474:CDS
CCAGCTGGTCGTGCTTCTGA+TGG 0.476933 7.2:+1217021 MS.gene024474:CDS
TTGTAGGAGCTATATAATCT+TGG 0.478024 7.2:+1218515 MS.gene024474:intron
CCTTGACGAATTTGGATGCA+TGG 0.485707 7.2:+1218622 MS.gene024474:CDS
TACAACTATGTGAGTTGGGA+TGG 0.486217 7.2:+1219010 MS.gene024474:CDS
CCCTTACAACTATGTGAGTT+GGG 0.488599 7.2:+1219006 MS.gene024474:CDS
TGTTTGGTTGGTTTGAGTCA+AGG 0.490554 7.2:+1216880 MS.gene024474:CDS
GGAAGTTCTACTAAGAATGA+AGG 0.495691 7.2:-1218584 None:intergenic
CAATGTTCCTGAAATGGAAA+AGG 0.495858 7.2:-1219103 None:intergenic
GGATGCCAATGTAGCATAGT+TGG 0.496579 7.2:-1217950 None:intergenic
TGTGCCAATGACTGCTAGGT+TGG 0.505293 7.2:-1218322 None:intergenic
ACCCTTACAACTATGTGAGT+TGG 0.506490 7.2:+1219005 MS.gene024474:CDS
AGCATCTGAGAGACTCTCTC+TGG 0.511050 7.2:-1218705 None:intergenic
TAGGAGCTATATAATCTTGG+TGG 0.518098 7.2:+1218518 MS.gene024474:intron
AGGACGTGGATGTGATTTCA+AGG 0.520754 7.2:+1216900 MS.gene024474:CDS
ACAACTATGTGAGTTGGGAT+GGG 0.528306 7.2:+1219011 MS.gene024474:CDS
TCAAGGTCTGAACTATTATG+AGG 0.530045 7.2:-1218605 None:intergenic
CCATCAGAAGCACGACCAGC+TGG 0.531119 7.2:-1217021 None:intergenic
AATGAAGGGTAGCACCCTAC+TGG 0.532982 7.2:-1218569 None:intergenic
TACTTAATCTTGCACCAGTA+GGG 0.541138 7.2:+1218555 MS.gene024474:CDS
AAGCTTGCTTGCAGCTTCGG+TGG 0.542742 7.2:-1219041 None:intergenic
GAAATTTGTGAAACTACTTG+TGG 0.543071 7.2:-1218366 None:intergenic
CGGAGCCAACTATGCTACAT+TGG 0.547703 7.2:+1217945 MS.gene024474:CDS
AAATTTGTGAAACTACTTGT+GGG 0.547709 7.2:-1218365 None:intergenic
TTCTTACAACAATGCAGTAG+TGG 0.550306 7.2:+1218646 MS.gene024474:CDS
CAGCTGGTCGTGCTTCTGAT+GGG 0.550469 7.2:+1217022 MS.gene024474:CDS
TTTGATCCTAAAGTTTACTG+TGG 0.552886 7.2:+1218932 MS.gene024474:CDS
TTTCCAAGTATATCTGGTGA+TGG 0.553970 7.2:-1218258 None:intergenic
GCTGAATAGCAAGGGAGAAA+GGG 0.557520 7.2:-1218017 None:intergenic
AACCATGAGAAGTAGGATGC+CGG 0.560111 7.2:-1218772 None:intergenic
CGATACCTACACTGTTCTGT+TGG 0.565280 7.2:+1218742 MS.gene024474:CDS
CCATAAGGACCAGATTCAGC+AGG 0.567818 7.2:-1216979 None:intergenic
GTACTTAATCTTGCACCAGT+AGG 0.570862 7.2:+1218554 MS.gene024474:CDS
CCCAACTCACATAGTTGTAA+GGG 0.576209 7.2:-1219006 None:intergenic
TGTTCCTGAAATGGAAAAGG+AGG 0.581672 7.2:-1219100 None:intergenic
TTTGGTTGAGCTGAATAGCA+AGG 0.582254 7.2:-1218026 None:intergenic
AACCTAGCAGTCATTGGCAC+AGG 0.585417 7.2:+1218324 MS.gene024474:CDS
TGACTCAAACCAACCAAACA+AGG 0.585659 7.2:-1216877 None:intergenic
ACTTACTTCAATAAACCAGC+TGG 0.586084 7.2:+1217006 MS.gene024474:CDS
GAAGTTCTACTAAGAATGAA+GGG 0.588435 7.2:-1218583 None:intergenic
GTGTTTGAACCATGAGAAGT+AGG 0.588802 7.2:-1218779 None:intergenic
CTAGCAGTCATTGGCACAGG+TGG 0.589232 7.2:+1218327 MS.gene024474:CDS
GTTAAAGAAGCTGATCAGCA+AGG 0.598763 7.2:+1218069 MS.gene024474:CDS
GTTGGTTTGAGTCAAGGACG+TGG 0.601280 7.2:+1216886 MS.gene024474:CDS
GCATGTTGTGGATATGGTGG+AGG 0.601305 7.2:+1218899 MS.gene024474:CDS
TATGGTACAAAAGCATGTTG+TGG 0.602150 7.2:+1218887 MS.gene024474:CDS
TTGGTTGAGCTGAATAGCAA+GGG 0.602445 7.2:-1218025 None:intergenic
AGATCCATTAAGAATAGCAT+AGG 0.606063 7.2:-1219068 None:intergenic
AGGAGCTATATAATCTTGGT+GGG 0.609668 7.2:+1218519 MS.gene024474:intron
GATTCAAATTCAGATACTGG+TGG 0.612266 7.2:+1216940 MS.gene024474:CDS
AGACTCGTGATTGATTTCAT+CGG 0.617834 7.2:+1217045 MS.gene024474:CDS
CACCTGTGCCAATGACTGCT+AGG 0.626922 7.2:-1218326 None:intergenic
AAGCTCCAACAGAACAGTGT+AGG 0.634682 7.2:-1218747 None:intergenic
CCATGCATCCAAATTCGTCA+AGG 0.645133 7.2:-1218622 None:intergenic
AAAGCATGTTGTGGATATGG+TGG 0.654269 7.2:+1218896 MS.gene024474:CDS
AGTTTACTGTGGAAATACAA+AGG 0.664418 7.2:+1218943 MS.gene024474:CDS
ATAGGATCTGATTATAAACA+CGG 0.689852 7.2:+1217925 MS.gene024474:CDS
AGTATTAGGAAGAAGCACAG+TGG 0.690045 7.2:-1217971 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACAAAAATAAACATTAA+GGG - chr7.2:1218850-1218869 None:intergenic 10.0%
!! ATTAGAATGTTAATATATTA+AGG - chr7.2:1218207-1218226 None:intergenic 10.0%
!! TATAACAAAAATAAACATTA+AGG - chr7.2:1218851-1218870 None:intergenic 10.0%
!! AATGAACAATAATATATTCA+TGG - chr7.2:1216842-1216861 None:intergenic 15.0%
!! ATATAAATCAACTTATTGAT+TGG + chr7.2:1217291-1217310 MS.gene024474:intron 15.0%
!! GTTAAAATCTTGAAAATTAT+AGG + chr7.2:1217416-1217435 MS.gene024474:intron 15.0%
!!! AAATAGTAAGTTGAAATTAA+CGG - chr7.2:1217673-1217692 None:intergenic 15.0%
!!! AATCAATAAGTTGATTTATA+TGG - chr7.2:1217292-1217311 None:intergenic 15.0%
!!! AGAGTTAATATTTATTTTCT+TGG - chr7.2:1217703-1217722 None:intergenic 15.0%
!!! ATAATTATGATTTTTATTGC+AGG + chr7.2:1217329-1217348 MS.gene024474:intron 15.0%
!!! ATTTCAACTTACTATTTTTA+TGG + chr7.2:1217676-1217695 MS.gene024474:intron 15.0%
!!! TAATTATGATTTTTATTGCA+GGG + chr7.2:1217330-1217349 MS.gene024474:intron 15.0%
!!! TCTTTGTATACATTTTATAT+TGG + chr7.2:1218282-1218301 MS.gene024474:CDS 15.0%
!!! TTATTTTTGTTATATGAAAC+AGG + chr7.2:1218857-1218876 MS.gene024474:intron 15.0%
!! ATAAGTTACTCTTACTTTAA+TGG - chr7.2:1218397-1218416 None:intergenic 20.0%
!! GAATGTTAATATATTAAGGA+AGG - chr7.2:1218203-1218222 None:intergenic 20.0%
!! TGATTAGACACATAATTTAA+TGG + chr7.2:1217797-1217816 MS.gene024474:intron 20.0%
!!! ACATTTTACAATAGTTAGTA+AGG - chr7.2:1217135-1217154 None:intergenic 20.0%
! AAATTTGTGAAACTACTTGT+GGG - chr7.2:1218368-1218387 None:intergenic 25.0%
! AGTGATATCATTAGAGTTAA+GGG - chr7.2:1217112-1217131 None:intergenic 25.0%
! ATAACCTATGCTATTCTTAA+TGG + chr7.2:1219064-1219083 MS.gene024474:CDS 25.0%
! ATAGGATCTGATTATAAACA+CGG + chr7.2:1217925-1217944 MS.gene024474:CDS 25.0%
! GTTAATATATTAAGGAAGGA+AGG - chr7.2:1218199-1218218 None:intergenic 25.0%
! TATTAACTCTATCAACTGTT+AGG + chr7.2:1217713-1217732 MS.gene024474:intron 25.0%
! TGGAAATATTTGTTTGGTTA+TGG + chr7.2:1217587-1217606 MS.gene024474:intron 25.0%
!! AAAGATTTTCCAAGTATATC+TGG - chr7.2:1218267-1218286 None:intergenic 25.0%
!! AGGAAAATTTTACACAATGT+AGG - chr7.2:1217509-1217528 None:intergenic 25.0%
!! ATAGTATTTTCTCATTCACT+CGG + chr7.2:1217206-1217225 MS.gene024474:intron 25.0%
!! ATGATTTGCAAACAGATATT+AGG - chr7.2:1217481-1217500 None:intergenic 25.0%
!! TGATTTGCAAACAGATATTA+GGG - chr7.2:1217480-1217499 None:intergenic 25.0%
AAGGAAGGAAGGAAAATAAA+AGG - chr7.2:1218188-1218207 None:intergenic 30.0%
AGATCCATTAAGAATAGCAT+AGG - chr7.2:1219071-1219090 None:intergenic 30.0%
AGTCCATATCTACAATCAAT+AGG + chr7.2:1217907-1217926 MS.gene024474:CDS 30.0%
AGTTTACTGTGGAAATACAA+AGG + chr7.2:1218943-1218962 MS.gene024474:CDS 30.0%
ATTTGCAAACAGATATTAGG+GGG - chr7.2:1217478-1217497 None:intergenic 30.0%
GAAATTTGTGAAACTACTTG+TGG - chr7.2:1218369-1218388 None:intergenic 30.0%
GAAGTTCTACTAAGAATGAA+GGG - chr7.2:1218586-1218605 None:intergenic 30.0%
GAGTGATATCATTAGAGTTA+AGG - chr7.2:1217113-1217132 None:intergenic 30.0%
GATGCAAATAATCACAGATT+AGG - chr7.2:1217529-1217548 None:intergenic 30.0%
GATTTGCAAACAGATATTAG+GGG - chr7.2:1217479-1217498 None:intergenic 30.0%
GGAAATACAAAGGAGATAAA+TGG + chr7.2:1218953-1218972 MS.gene024474:CDS 30.0%
GTATTTCCACAGTAAACTTT+AGG - chr7.2:1218941-1218960 None:intergenic 30.0%
TATGAAACAGGTCTTCAATA+TGG + chr7.2:1218869-1218888 MS.gene024474:intron 30.0%
TCTAGCTGGAAATATTTGTT+TGG + chr7.2:1217581-1217600 MS.gene024474:intron 30.0%
TGGTTGCAAATTGTTTCATT+TGG - chr7.2:1218047-1218066 None:intergenic 30.0%
TGTAGATATGGACTCAAAAA+TGG - chr7.2:1217901-1217920 None:intergenic 30.0%
TTGAAGTAAGTCATTCCATA+AGG - chr7.2:1216997-1217016 None:intergenic 30.0%
TTGTAGGAGCTATATAATCT+TGG + chr7.2:1218515-1218534 MS.gene024474:intron 30.0%
TTTGATCCTAAAGTTTACTG+TGG + chr7.2:1218932-1218951 MS.gene024474:CDS 30.0%
! AATACTTCTTTGTTTGTCAC+TGG + chr7.2:1217988-1218007 MS.gene024474:CDS 30.0%
! ACTTAGCACTACATTTTAAG+TGG - chr7.2:1217454-1217473 None:intergenic 30.0%
! ATACTTCTTTGTTTGTCACT+GGG + chr7.2:1217989-1218008 MS.gene024474:CDS 30.0%
! GATCCTATTGATTGTAGATA+TGG - chr7.2:1217913-1217932 None:intergenic 30.0%
! TAGTAAGTTGAAATTAACGG+TGG - chr7.2:1217670-1217689 None:intergenic 30.0%
! TAGTATTTTCTCATTCACTC+GGG + chr7.2:1217207-1217226 MS.gene024474:intron 30.0%
! TTTTGCTCACTGAAATTTGT+AGG + chr7.2:1218499-1218518 MS.gene024474:intron 30.0%
!! GTGACAAACAAAGAAGTATT+AGG - chr7.2:1217988-1218007 None:intergenic 30.0%
!! TTCAAGGCTATTTTCAACTT+TGG + chr7.2:1216916-1216935 MS.gene024474:CDS 30.0%
!!! AACCATTTTAAAACTGTTGG+TGG - chr7.2:1218129-1218148 None:intergenic 30.0%
!!! CCAACAGTTTTAAAATGGTT+CGG + chr7.2:1218129-1218148 MS.gene024474:intron 30.0%
AACTCTATCAACTGTTAGGA+TGG + chr7.2:1217717-1217736 MS.gene024474:intron 35.0%
ACTCTATCAACTGTTAGGAT+GGG + chr7.2:1217718-1217737 MS.gene024474:intron 35.0%
ACTTACTTCAATAAACCAGC+TGG + chr7.2:1217006-1217025 MS.gene024474:CDS 35.0%
AGATCACAATGTTCCTGAAA+TGG - chr7.2:1219112-1219131 None:intergenic 35.0%
AGCAGGTGAATTGAATTGAT+TGG + chr7.2:1217367-1217386 MS.gene024474:intron 35.0%
AGGAGCTATATAATCTTGGT+GGG + chr7.2:1218519-1218538 MS.gene024474:intron 35.0%
CAATGTTCCTGAAATGGAAA+AGG - chr7.2:1219106-1219125 None:intergenic 35.0%
CATTGTGATCTTCAACCTAT+AGG + chr7.2:1219121-1219140 MS.gene024474:CDS 35.0%
CTAAAGGTTATAAGAGTCGA+AGG - chr7.2:1217246-1217265 None:intergenic 35.0%
CTAGATGTCTTTGTCTTGTA+AGG - chr7.2:1217566-1217585 None:intergenic 35.0%
CTTCGACTCTTATAACCTTT+AGG + chr7.2:1217244-1217263 MS.gene024474:intron 35.0%
GATTCAAATTCAGATACTGG+TGG + chr7.2:1216940-1216959 MS.gene024474:CDS 35.0%
GGAAGTTCTACTAAGAATGA+AGG - chr7.2:1218587-1218606 None:intergenic 35.0%
GGAGATTCAAATTCAGATAC+TGG + chr7.2:1216937-1216956 MS.gene024474:CDS 35.0%
TACTTAATCTTGCACCAGTA+GGG + chr7.2:1218555-1218574 MS.gene024474:CDS 35.0%
TAGGAGCTATATAATCTTGG+TGG + chr7.2:1218518-1218537 MS.gene024474:intron 35.0%
TCAAGGTCTGAACTATTATG+AGG - chr7.2:1218608-1218627 None:intergenic 35.0%
TGGTTCAAACACATATCTCT+TGG + chr7.2:1218790-1218809 MS.gene024474:intron 35.0%
TTCTTACAACAATGCAGTAG+TGG + chr7.2:1218646-1218665 MS.gene024474:CDS 35.0%
TTTCCAAGTATATCTGGTGA+TGG - chr7.2:1218261-1218280 None:intergenic 35.0%
! ACAAAAGCATGTTGTGGATA+TGG + chr7.2:1218893-1218912 MS.gene024474:CDS 35.0%
! AGACTCGTGATTGATTTCAT+CGG + chr7.2:1217045-1217064 MS.gene024474:CDS 35.0%
! ATATGGTTAGTTAACTCAGC+TGG - chr7.2:1217275-1217294 None:intergenic 35.0%
! ATGGTTCGGAAAATTACGTA+TGG + chr7.2:1218143-1218162 MS.gene024474:intron 35.0%
! CTGATCAGCTTCTTTAACTT+TGG - chr7.2:1218067-1218086 None:intergenic 35.0%
! GGTTGGAAGTGAAATCATTT+TGG - chr7.2:1218308-1218327 None:intergenic 35.0%
! TATGGTACAAAAGCATGTTG+TGG + chr7.2:1218887-1218906 MS.gene024474:CDS 35.0%
!! TATATCTGGTGATGGAAGTT+TGG - chr7.2:1218253-1218272 None:intergenic 35.0%
!!! CCGAACCATTTTAAAACTGT+TGG - chr7.2:1218132-1218151 None:intergenic 35.0%
!!! TGCCACCAACAGTTTTAAAA+TGG + chr7.2:1218124-1218143 MS.gene024474:intron 35.0%
AAAGCATGTTGTGGATATGG+TGG + chr7.2:1218896-1218915 MS.gene024474:CDS 40.0%
ACAAGACAAAGACATCTAGC+TGG + chr7.2:1217567-1217586 MS.gene024474:intron 40.0%
ACCCTTACAACTATGTGAGT+TGG + chr7.2:1219005-1219024 MS.gene024474:CDS 40.0%
AGTTCAGACCTTGACGAATT+TGG + chr7.2:1218614-1218633 MS.gene024474:CDS 40.0%
ATAGTGTGTGTTCAGTTCTG+TGG + chr7.2:1218450-1218469 MS.gene024474:intron 40.0%
ATTCTGTCAGCTCAAGCTAT+TGG + chr7.2:1217871-1217890 MS.gene024474:intron 40.0%
CCCAACTCACATAGTTGTAA+GGG - chr7.2:1219009-1219028 None:intergenic 40.0%
CCCTTACAACTATGTGAGTT+GGG + chr7.2:1219006-1219025 MS.gene024474:CDS 40.0%
CTTCCATCACCAGATATACT+TGG + chr7.2:1218255-1218274 MS.gene024474:CDS 40.0%
GAACTGAACACACACTATGT+TGG - chr7.2:1218448-1218467 None:intergenic 40.0%
GTACTTAATCTTGCACCAGT+AGG + chr7.2:1218554-1218573 MS.gene024474:CDS 40.0%
GTGTTTGAACCATGAGAAGT+AGG - chr7.2:1218782-1218801 None:intergenic 40.0%
GTTAAAGAAGCTGATCAGCA+AGG + chr7.2:1218069-1218088 MS.gene024474:CDS 40.0%
TCCCAACTCACATAGTTGTA+AGG - chr7.2:1219010-1219029 None:intergenic 40.0%
TCTTGGTGGGAGAACATTTA+TGG + chr7.2:1218532-1218551 MS.gene024474:CDS 40.0%
TGACTCAAACCAACCAAACA+AGG - chr7.2:1216880-1216899 None:intergenic 40.0%
TGTTCCTGAAATGGAAAAGG+AGG - chr7.2:1219103-1219122 None:intergenic 40.0%
TTATAAGAGTCGAAGGATCG+TGG - chr7.2:1217239-1217258 None:intergenic 40.0%
TTGGTTGAGCTGAATAGCAA+GGG - chr7.2:1218028-1218047 None:intergenic 40.0%
TTTGGTTGAGCTGAATAGCA+AGG - chr7.2:1218029-1218048 None:intergenic 40.0%
! ACAACTATGTGAGTTGGGAT+GGG + chr7.2:1219011-1219030 MS.gene024474:CDS 40.0%
! AGTATTAGGAAGAAGCACAG+TGG - chr7.2:1217974-1217993 None:intergenic 40.0%
! TACAACTATGTGAGTTGGGA+TGG + chr7.2:1219010-1219029 MS.gene024474:CDS 40.0%
! TATAAGCTTGCTTGCAGCTT+CGG - chr7.2:1219047-1219066 None:intergenic 40.0%
! TGATCCTCCTTTTCCATTTC+AGG + chr7.2:1219096-1219115 MS.gene024474:CDS 40.0%
!! TGTTTGGTTGGTTTGAGTCA+AGG + chr7.2:1216880-1216899 MS.gene024474:CDS 40.0%
AACCATGAGAAGTAGGATGC+CGG - chr7.2:1218775-1218794 None:intergenic 45.0%
AAGCTCCAACAGAACAGTGT+AGG - chr7.2:1218750-1218769 None:intergenic 45.0%
ACTTCCAACCTAGCAGTCAT+TGG + chr7.2:1218318-1218337 MS.gene024474:CDS 45.0%
AGCTGAATAGCAAGGGAGAA+AGG - chr7.2:1218021-1218040 None:intergenic 45.0%
AGGACGTGGATGTGATTTCA+AGG + chr7.2:1216900-1216919 MS.gene024474:CDS 45.0%
CCATGCATCCAAATTCGTCA+AGG - chr7.2:1218625-1218644 None:intergenic 45.0%
CCTTGACGAATTTGGATGCA+TGG + chr7.2:1218622-1218641 MS.gene024474:CDS 45.0%
CGATACCTACACTGTTCTGT+TGG + chr7.2:1218742-1218761 MS.gene024474:CDS 45.0%
GCTGAATAGCAAGGGAGAAA+GGG - chr7.2:1218020-1218039 None:intergenic 45.0%
GGATGCCAATGTAGCATAGT+TGG - chr7.2:1217953-1217972 None:intergenic 45.0%
GGGTGCTAAAATAAGCAAGC+AGG + chr7.2:1217350-1217369 MS.gene024474:intron 45.0%
! CATGCTTGTGTTGCCTTGTT+TGG + chr7.2:1216864-1216883 MS.gene024474:CDS 45.0%
! CTGTTCTGTTGGAGCTTTTC+CGG + chr7.2:1218753-1218772 MS.gene024474:CDS 45.0%
!! CTTGTGTTGCCTTGTTTGGT+TGG + chr7.2:1216868-1216887 MS.gene024474:CDS 45.0%
AACCTAGCAGTCATTGGCAC+AGG + chr7.2:1218324-1218343 MS.gene024474:CDS 50.0%
AATGAAGGGTAGCACCCTAC+TGG - chr7.2:1218572-1218591 None:intergenic 50.0%
AGCATCTGAGAGACTCTCTC+TGG - chr7.2:1218708-1218727 None:intergenic 50.0%
CCATAAGGACCAGATTCAGC+AGG - chr7.2:1216982-1217001 None:intergenic 50.0%
CCTGCTGAATCTGGTCCTTA+TGG + chr7.2:1216979-1216998 MS.gene024474:CDS 50.0%
CGGAGCCAACTATGCTACAT+TGG + chr7.2:1217945-1217964 MS.gene024474:CDS 50.0%
GCATGTTGTGGATATGGTGG+AGG + chr7.2:1218899-1218918 MS.gene024474:CDS 50.0%
TGTGCCAATGACTGCTAGGT+TGG - chr7.2:1218325-1218344 None:intergenic 50.0%
TTCCGGCATCCTACTTCTCA+TGG + chr7.2:1218770-1218789 MS.gene024474:CDS 50.0%
! GCAGCTTTTCCTGCTGAATC+TGG + chr7.2:1216970-1216989 MS.gene024474:CDS 50.0%
!! ACTCAGCTGGCTTGACCTAA+AGG - chr7.2:1217262-1217281 None:intergenic 50.0%
!! GTTGGTTTGAGTCAAGGACG+TGG + chr7.2:1216886-1216905 MS.gene024474:CDS 50.0%
CACCTGTGCCAATGACTGCT+AGG - chr7.2:1218329-1218348 None:intergenic 55.0%
CAGCTGGTCGTGCTTCTGAT+GGG + chr7.2:1217022-1217041 MS.gene024474:CDS 55.0%
CTAGCAGTCATTGGCACAGG+TGG + chr7.2:1218327-1218346 MS.gene024474:CDS 55.0%
! AAGCTTGCTTGCAGCTTCGG+TGG - chr7.2:1219044-1219063 None:intergenic 55.0%
CCAGCTGGTCGTGCTTCTGA+TGG + chr7.2:1217021-1217040 MS.gene024474:CDS 60.0%
! CCATCAGAAGCACGACCAGC+TGG - chr7.2:1217024-1217043 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 1216823 1219147 1216823 ID=MS.gene024474
chr7.2 mRNA 1216823 1219147 1216823 ID=MS.gene024474.t1;Parent=MS.gene024474
chr7.2 exon 1216823 1217066 1216823 ID=MS.gene024474.t1.exon1;Parent=MS.gene024474.t1
chr7.2 CDS 1216823 1217066 1216823 ID=cds.MS.gene024474.t1;Parent=MS.gene024474.t1
chr7.2 exon 1217881 1218090 1217881 ID=MS.gene024474.t1.exon2;Parent=MS.gene024474.t1
chr7.2 CDS 1217881 1218090 1217881 ID=cds.MS.gene024474.t1;Parent=MS.gene024474.t1
chr7.2 exon 1218247 1218401 1218247 ID=MS.gene024474.t1.exon3;Parent=MS.gene024474.t1
chr7.2 CDS 1218247 1218401 1218247 ID=cds.MS.gene024474.t1;Parent=MS.gene024474.t1
chr7.2 exon 1218521 1218791 1218521 ID=MS.gene024474.t1.exon4;Parent=MS.gene024474.t1
chr7.2 CDS 1218521 1218791 1218521 ID=cds.MS.gene024474.t1;Parent=MS.gene024474.t1
chr7.2 exon 1218879 1219147 1218879 ID=MS.gene024474.t1.exon5;Parent=MS.gene024474.t1
chr7.2 CDS 1218879 1219147 1218879 ID=cds.MS.gene024474.t1;Parent=MS.gene024474.t1
Gene Sequence

>MS.gene024474

ATGAGTTCAAACACATCCATGAATATATTATTGTTCATTTTCATGCTTGTGTTGCCTTGTTTGGTTGGTTTGAGTCAAGGACGTGGATGTGATTTCAAGGCTATTTTCAACTTTGGAGATTCAAATTCAGATACTGGTGGATTTTATGCAGCTTTTCCTGCTGAATCTGGTCCTTATGGAATGACTTACTTCAATAAACCAGCTGGTCGTGCTTCTGATGGGAGACTCGTGATTGATTTCATCGGTAATCAACAATCTATATCATTTTTTACATTAATCGATGCTTCCCTTAACTCTAATGATATCACTCCTTACTAACTATTGTAAAATGTACATTATGTTTGTTGTGAACAAGATTTTTCTTTTGAATAATTGTTAGTATGATAGTATTTTCTCATTCACTCGGGCTTGAACCACGATCCTTCGACTCTTATAACCTTTAGGTCAAGCCAGCTGAGTTAACTAACCATATAAATCAACTTATTGATTGGTTTCTCTGATGAGATATAATTATGATTTTTATTGCAGGGTGCTAAAATAAGCAAGCAGGTGAATTGAATTGATTGGATGATATAGATAAATTCTTTTCAACTGTTAAAATCTTGAAAATTATAGGTGTATTAGAGAACCACTTAAAATGTAGTGCTAAGTGCCCCCTAATATCTGTTTGCAAATCATGCAATCCTACATTGTGTAAAATTTTCCTAATCTGTGATTATTTGCATCTTTAGTATAGTTTTCCTTACAAGACAAAGACATCTAGCTGGAAATATTTGTTTGGTTATGGAATAGTCAGTATTTTATCAGTCATAAATATGCATGACATGACATGACATTTTTGTCTCCACCGTTAATTTCAACTTACTATTTTTATGGTCCAAGAAAATAAATATTAACTCTATCAACTGTTAGGATGGGCTGTATCTGTATATCTTGTTATGTGATGTCATTCACTCATCTTTCATATTTTACTATGATTAGACACATAATTTAATGGTTGAGAGCTATAATATCATGTATCAAACAATCATACATTTTTATTTATTTGATTCTGTCAGCTCAAGCTATTGGAATTCCATTTTTGAGTCCATATCTACAATCAATAGGATCTGATTATAAACACGGAGCCAACTATGCTACATTGGCATCCACTGTGCTTCTTCCTAATACTTCTTTGTTTGTCACTGGGATCAGCCCTTTCTCCCTTGCTATTCAGCTCAACCAAATGAAACAATTTGCAACCAAAGTTAAAGAAGCTGATCAGCAAGGTACAAAATGCACAAACTTTCTACTCTTATAACTGCCACCAACAGTTTTAAAATGGTTCGGAAAATTACGTATGGTACTGCATCTAAGTTTAGTCCTTTTATTTTCCTTCCTTCCTTAATATATTAACATTCTAATTTCTTTTAATTGTTGCTCAGAAACCAAACTTCCATCACCAGATATACTTGGAAAATCTTTGTATACATTTTATATTGGCCAAAATGATTTCACTTCCAACCTAGCAGTCATTGGCACAGGTGGTGTGCAAGAGTTTCTCCCACAAGTAGTTTCACAAATTTCTGCTACCATTAAAGTAAGAGTAACTTATGTCTATTAGTTAGTCACGAGACTCGACACCAACATAGTGTGTGTTCAGTTCTGTGGTGACAAAAATTGTTATTAACTTGAAATTTTGCTCACTGAAATTTGTAGGAGCTATATAATCTTGGTGGGAGAACATTTATGGTACTTAATCTTGCACCAGTAGGGTGCTACCCTTCATTCTTAGTAGAACTTCCTCATAATAGTTCAGACCTTGACGAATTTGGATGCATGGTTTCTTACAACAATGCAGTAGTGGACTATAACAACATGTTGAAAGAGTCATTGAAACAAACCAGAGAGAGTCTCTCAGATGCTTCTGTCATTTATGTCGATACCTACACTGTTCTGTTGGAGCTTTTCCGGCATCCTACTTCTCATGGTTCAAACACATATCTCTTGGCTTGTTTTAAAAGAACATTGCTAATTGTTATGTTCCCTTAATGTTTATTTTTGTTATATGAAACAGGTCTTCAATATGGTACAAAAGCATGTTGTGGATATGGTGGAGGTGAATACAACTTTGATCCTAAAGTTTACTGTGGAAATACAAAGGAGATAAATGGAAAAAGAGTGACAGCAACAGCATGTGATGACCCTTACAACTATGTGAGTTGGGATGGGATTCATGCCACCGAAGCTGCAAGCAAGCTTATAACCTATGCTATTCTTAATGGATCTTACTCTGATCCTCCTTTTCCATTTCAGGAACATTGTGATCTTCAACCTATAGGTTGA

Protein sequence

>MS.gene024474.t1

MSSNTSMNILLFIFMLVLPCLVGLSQGRGCDFKAIFNFGDSNSDTGGFYAAFPAESGPYGMTYFNKPAGRASDGRLVIDFIAQAIGIPFLSPYLQSIGSDYKHGANYATLASTVLLPNTSLFVTGISPFSLAIQLNQMKQFATKVKEADQQETKLPSPDILGKSLYTFYIGQNDFTSNLAVIGTGGVQEFLPQVVSQISATIKELYNLGGRTFMVLNLAPVGCYPSFLVELPHNSSDLDEFGCMVSYNNAVVDYNNMLKESLKQTRESLSDASVIYVDTYTVLLELFRHPTSHGLQYGTKACCGYGGGEYNFDPKVYCGNTKEINGKRVTATACDDPYNYVSWDGIHATEAASKLITYAILNGSYSDPPFPFQEHCDLQPIG