AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03697

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03697.t1 MTR_2g027560 98.018 454 9 0 1 454 22 475 0.0 917
MS.gene03697.t1 MTR_4g134280 75.414 362 83 3 96 454 2 360 0.0 579
MS.gene03697.t1 MTR_1g010120 52.667 450 209 2 7 454 26 473 3.35e-168 482
MS.gene03697.t1 MTR_4g124440 52.273 440 202 5 10 445 31 466 3.73e-157 454
MS.gene03697.t1 MTR_7g085390 50.808 433 205 5 7 434 26 455 6.48e-156 451
MS.gene03697.t1 MTR_3g108600 52.064 436 185 4 1 433 25 439 1.39e-155 449
MS.gene03697.t1 MTR_6g032820 52.038 417 189 6 5 413 24 437 4.57e-151 437
MS.gene03697.t1 MTR_1g053320 50.230 434 208 5 2 429 25 456 8.71e-150 435
MS.gene03697.t1 MTR_4g112025 48.380 432 216 4 7 433 31 460 2.75e-145 425
MS.gene03697.t1 MTR_3g031770 46.578 453 234 3 6 454 26 474 1.58e-144 422
MS.gene03697.t1 MTR_8g092070 45.538 437 233 4 6 439 33 467 3.51e-140 414
MS.gene03697.t1 MTR_3g095050 47.196 428 219 6 7 431 34 457 4.36e-136 400
MS.gene03697.t1 MTR_5g085580 34.649 456 257 14 7 432 25 469 9.89e-71 231
MS.gene03697.t1 MTR_4g088155 34.298 449 263 17 3 429 19 457 2.69e-66 219
MS.gene03697.t1 MTR_8g012400 33.634 443 259 15 8 429 30 458 1.27e-64 215
MS.gene03697.t1 MTR_1g056640 32.903 465 266 14 6 432 37 493 1.55e-64 216
MS.gene03697.t1 MTR_4g069940 31.991 447 278 14 3 432 25 462 8.95e-63 211
MS.gene03697.t1 MTR_3g116510 32.432 444 276 14 3 432 24 457 1.46e-62 210
MS.gene03697.t1 MTR_1g031900 33.333 438 267 14 4 429 21 445 9.13e-62 209
MS.gene03697.t1 MTR_1g031900 33.333 438 267 14 4 429 21 445 9.54e-62 209
MS.gene03697.t1 MTR_8g085720 32.723 437 266 15 7 429 26 448 1.37e-60 206
MS.gene03697.t1 MTR_6g088885 30.296 439 285 12 5 430 25 455 7.48e-60 204
MS.gene03697.t1 MTR_5g078200 33.787 441 265 14 1 427 15 442 2.94e-59 205
MS.gene03697.t1 MTR_3g065460 32.420 438 271 13 4 429 21 445 3.27e-59 202
MS.gene03697.t1 MTR_4g132280 32.184 435 270 13 7 429 45 466 4.15e-59 202
MS.gene03697.t1 MTR_3g080410 38.329 347 198 10 1 341 20 356 6.04e-58 195
MS.gene03697.t1 MTR_7g053500 31.591 440 275 15 8 429 27 458 1.03e-56 194
MS.gene03697.t1 MTR_3g083580 31.193 436 268 17 7 427 26 444 1.65e-56 195
MS.gene03697.t1 MTR_5g078200 33.095 420 256 13 20 427 3 409 2.82e-56 196
MS.gene03697.t1 MTR_4g076570 34.472 322 200 7 6 326 21 332 3.89e-56 190
MS.gene03697.t1 MTR_1g052430 34.049 326 204 7 2 326 27 342 2.40e-55 189
MS.gene03697.t1 MTR_2g034440 34.688 320 198 6 5 323 20 329 3.08e-55 187
MS.gene03697.t1 MTR_1g077990 35.650 331 197 11 6 330 30 350 6.12e-55 188
MS.gene03697.t1 MTR_7g026340 31.390 446 265 19 5 428 21 447 1.24e-54 189
MS.gene03697.t1 MTR_2g034470 34.891 321 198 6 5 324 28 338 4.82e-54 184
MS.gene03697.t1 MTR_4g083500 28.659 492 299 14 2 452 39 519 1.25e-53 188
MS.gene03697.t1 MTR_2g034480 34.451 328 204 6 3 329 23 340 3.06e-53 182
MS.gene03697.t1 MTR_2g034470 35.880 301 182 6 25 324 13 303 2.34e-52 179
MS.gene03697.t1 MTR_1g022160 29.741 464 278 16 7 432 24 477 4.60e-52 182
MS.gene03697.t1 MTR_4g076255 36.086 327 185 11 6 328 24 330 4.88e-52 178
MS.gene03697.t1 MTR_1g022160 29.935 461 275 16 7 429 24 474 6.57e-52 182
MS.gene03697.t1 MTR_1g022160 29.736 454 271 16 7 422 24 467 2.82e-50 177
MS.gene03697.t1 MTR_4g084480 32.537 335 211 10 2 331 20 344 1.22e-49 174
MS.gene03697.t1 MTR_4g084480 32.537 335 211 10 2 331 27 351 1.32e-49 174
MS.gene03697.t1 MTR_4g084480 32.537 335 211 10 2 331 27 351 1.55e-49 174
MS.gene03697.t1 MTR_1g007810 35.962 317 184 12 7 316 16 320 2.89e-49 172
MS.gene03697.t1 MTR_4g010200 33.333 324 204 9 8 326 34 350 8.05e-49 172
MS.gene03697.t1 MTR_7g081350 33.639 327 196 9 5 326 25 335 8.33e-49 170
MS.gene03697.t1 MTR_4g114850 34.049 326 199 10 8 326 27 343 2.63e-48 170
MS.gene03697.t1 MTR_8g012400 32.225 391 230 15 60 429 2 378 3.40e-48 170
MS.gene03697.t1 MTR_4g114850 34.049 326 199 10 8 326 27 343 4.51e-48 169
MS.gene03697.t1 MTR_4g114850 34.049 326 199 10 8 326 27 343 6.39e-48 169
MS.gene03697.t1 MTR_4g052970 33.435 329 204 10 6 328 28 347 6.70e-48 169
MS.gene03697.t1 MTR_8g102340 31.694 366 232 12 75 430 62 419 1.19e-47 171
MS.gene03697.t1 MTR_4g076470 33.230 322 193 10 6 324 22 324 2.49e-46 163
MS.gene03697.t1 MTR_4g076430 32.523 329 200 10 3 328 19 328 3.48e-46 163
MS.gene03697.t1 MTR_7g053500 31.959 388 238 15 60 429 2 381 4.95e-46 164
MS.gene03697.t1 MTR_4g076490 33.235 340 204 11 5 341 95 414 6.78e-46 164
MS.gene03697.t1 MTR_4g076500 33.841 328 197 10 6 328 77 389 2.64e-45 162
MS.gene03697.t1 MTR_4g076440 32.024 331 203 11 1 328 17 328 4.52e-45 160
MS.gene03697.t1 MTR_1g022160 32.523 329 207 9 7 328 24 344 1.27e-44 161
MS.gene03697.t1 MTR_7g081370 33.645 321 187 9 7 326 28 323 1.75e-43 155
MS.gene03697.t1 MTR_2g086530 31.343 335 205 13 8 333 9 327 5.51e-43 155
MS.gene03697.t1 MTR_2g086530 31.343 335 205 13 8 333 30 348 1.12e-42 155
MS.gene03697.t1 MTR_3g116510 32.424 330 202 12 117 432 1 323 1.01e-41 151
MS.gene03697.t1 MTR_2g019345 31.193 327 205 12 8 326 25 339 2.96e-40 149
MS.gene03697.t1 MTR_5g081720 32.308 325 195 13 24 338 54 363 9.47e-34 130
MS.gene03697.t1 MTR_4g036680 32.031 128 81 4 201 327 54 176 4.36e-16 77.4
MS.gene03697.t1 MTR_4g036775 32.031 128 81 4 201 327 54 176 8.29e-16 76.6
MS.gene03697.t1 MTR_2g072500 39.506 81 48 1 348 427 8 88 1.12e-11 61.2
MS.gene03697.t1 MTR_8g085440 37.634 93 55 3 340 429 23 115 8.45e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03697.t1 AT4G17180 73.438 448 109 3 4 451 22 459 0.0 696
MS.gene03697.t1 AT4G31140 52.703 444 199 4 7 448 27 461 7.09e-166 476
MS.gene03697.t1 AT5G58090 52.778 432 199 3 5 433 20 449 5.54e-160 461
MS.gene03697.t1 AT3G24330 50.913 438 207 7 5 437 37 471 9.42e-154 446
MS.gene03697.t1 AT1G64760 50.575 435 206 7 5 434 23 453 1.53e-152 442
MS.gene03697.t1 AT1G64760 50.575 435 206 7 5 434 23 453 1.53e-152 442
MS.gene03697.t1 AT2G19440 51.039 433 203 7 7 434 21 449 1.84e-152 442
MS.gene03697.t1 AT2G19440 51.039 433 203 7 7 434 21 449 1.84e-152 442
MS.gene03697.t1 AT3G04010 49.885 435 208 7 5 433 31 461 1.59e-150 437
MS.gene03697.t1 AT5G18220 49.091 440 209 8 5 435 28 461 9.53e-150 435
MS.gene03697.t1 AT5G20870 47.826 460 221 6 7 450 30 486 1.73e-142 417
MS.gene03697.t1 AT5G58480 47.775 427 217 3 6 431 25 446 4.24e-139 407
MS.gene03697.t1 AT5G64790 45.708 431 229 3 7 434 28 456 1.16e-138 407
MS.gene03697.t1 AT2G05790 34.858 459 256 14 6 432 24 471 7.05e-72 234
MS.gene03697.t1 AT5G55180 34.842 442 263 14 7 432 27 459 4.73e-71 232
MS.gene03697.t1 AT5G55180 34.873 433 257 14 7 423 27 450 5.68e-68 224
MS.gene03697.t1 AT2G01630 34.018 438 264 13 4 429 20 444 1.28e-67 224
MS.gene03697.t1 AT5G24318 33.857 446 260 18 3 429 26 455 8.68e-67 221
MS.gene03697.t1 AT2G01630 33.718 433 262 13 4 424 20 439 2.45e-66 219
MS.gene03697.t1 AT4G26830 32.955 440 271 13 7 432 29 458 5.73e-65 216
MS.gene03697.t1 AT4G26830 33.258 442 267 14 7 432 25 454 6.15e-65 216
MS.gene03697.t1 AT5G24318 33.787 441 257 18 3 424 26 450 3.16e-64 214
MS.gene03697.t1 AT3G07320 34.396 439 262 17 8 429 26 455 7.36e-63 211
MS.gene03697.t1 AT3G23770 34.146 451 265 18 1 429 31 471 1.01e-62 211
MS.gene03697.t1 AT1G66250 32.273 440 266 13 5 429 30 452 1.73e-62 211
MS.gene03697.t1 AT4G34480 33.257 436 272 13 3 429 22 447 2.75e-61 207
MS.gene03697.t1 AT3G55430 35.520 442 255 21 2 429 24 449 7.74e-61 205
MS.gene03697.t1 AT1G11820 32.184 435 270 13 7 429 44 465 3.44e-60 205
MS.gene03697.t1 AT4G14080 32.658 444 270 17 5 429 40 473 4.25e-59 201
MS.gene03697.t1 AT3G13560 32.339 436 267 13 7 429 26 446 9.31e-59 201
MS.gene03697.t1 AT3G13560 32.339 436 267 13 7 429 26 446 9.31e-59 201
MS.gene03697.t1 AT3G13560 32.339 436 267 13 7 429 26 446 9.31e-59 201
MS.gene03697.t1 AT3G13560 32.339 436 267 13 7 429 26 446 9.31e-59 201
MS.gene03697.t1 AT3G13560 32.339 436 267 13 7 429 26 446 9.31e-59 201
MS.gene03697.t1 AT2G16230 31.050 438 282 13 3 429 21 449 1.29e-58 201
MS.gene03697.t1 AT1G11820 31.935 429 267 13 7 423 44 459 2.39e-58 199
MS.gene03697.t1 AT3G57270 34.365 323 201 7 7 328 27 339 1.03e-56 191
MS.gene03697.t1 AT3G57260 34.985 323 193 8 7 328 32 338 1.08e-55 188
MS.gene03697.t1 AT3G57260 34.985 323 193 8 7 328 48 354 1.64e-55 188
MS.gene03697.t1 AT2G39640 32.118 439 262 20 2 427 25 440 4.16e-55 192
MS.gene03697.t1 AT5G56590 28.118 441 292 12 7 432 26 456 1.78e-53 187
MS.gene03697.t1 AT2G01630 32.620 374 230 11 4 368 20 380 1.35e-52 182
MS.gene03697.t1 AT4G18340 33.043 345 216 10 5 343 32 367 3.45e-52 180
MS.gene03697.t1 AT4G18340 33.043 345 216 10 5 343 32 367 6.07e-52 180
MS.gene03697.t1 AT4G34480 36.228 334 197 10 3 329 22 346 1.15e-51 178
MS.gene03697.t1 AT4G16260 34.877 324 198 8 6 328 23 334 2.27e-51 177
MS.gene03697.t1 AT5G24318 34.270 356 216 14 3 352 26 369 1.41e-50 176
MS.gene03697.t1 AT4G29360 27.719 469 295 12 5 438 35 494 3.27e-50 179
MS.gene03697.t1 AT4G29360 27.719 469 295 12 5 438 25 484 3.39e-50 179
MS.gene03697.t1 AT4G16260 35.714 308 185 8 22 328 10 305 6.72e-50 172
MS.gene03697.t1 AT5G42720 34.848 330 198 10 7 328 26 346 2.36e-49 174
MS.gene03697.t1 AT2G26600 33.231 325 203 9 8 326 35 351 1.25e-47 168
MS.gene03697.t1 AT3G57240 33.127 323 198 7 7 328 35 340 9.13e-47 165
MS.gene03697.t1 AT2G27500 32.927 328 206 9 7 328 29 348 1.09e-46 166
MS.gene03697.t1 AT3G15800 32.927 328 205 10 8 328 44 363 2.01e-46 166
MS.gene03697.t1 AT1G30080 32.424 330 204 11 5 326 34 352 2.14e-46 165
MS.gene03697.t1 AT2G27500 32.927 328 206 9 7 328 29 348 2.31e-46 165
MS.gene03697.t1 AT1G30080 32.424 330 204 11 5 326 34 352 2.42e-46 166
MS.gene03697.t1 AT1G32860 32.239 335 210 11 6 332 28 353 3.88e-45 162
MS.gene03697.t1 AT5G24318 33.333 327 190 12 120 429 1 316 1.11e-44 159
MS.gene03697.t1 AT1G11820 31.420 331 211 9 7 329 44 366 1.12e-43 158
MS.gene03697.t1 AT5G42100 33.934 333 202 12 5 328 25 348 2.23e-43 158
MS.gene03697.t1 AT5G42100 33.934 333 202 12 5 328 25 348 2.30e-43 158
MS.gene03697.t1 AT3G61810 32.448 339 200 12 3 329 51 372 1.78e-42 154
MS.gene03697.t1 AT5G20340 33.125 320 194 9 3 317 39 343 2.35e-40 148
MS.gene03697.t1 AT1G33220 33.225 307 188 8 1 302 28 322 3.66e-40 147
MS.gene03697.t1 AT5G20330 32.609 322 197 9 1 317 28 334 3.72e-40 147
MS.gene03697.t1 AT4G34480 31.871 342 216 12 97 429 3 336 4.78e-40 148
MS.gene03697.t1 AT1G77780 31.410 312 197 8 8 316 25 322 4.69e-39 145
MS.gene03697.t1 AT5G20560 31.034 319 205 8 1 316 28 334 1.11e-38 143
MS.gene03697.t1 AT3G46570 33.626 342 205 13 1 333 21 349 1.27e-38 143
MS.gene03697.t1 AT5G20390 31.562 320 199 10 3 317 29 333 2.38e-38 142
MS.gene03697.t1 AT1G77790 30.868 311 197 9 21 326 44 341 2.57e-35 134
MS.gene03697.t1 AT2G27500 32.734 278 173 9 57 328 1 270 1.70e-34 131
MS.gene03697.t1 AT3G55780 27.035 344 224 10 7 336 31 361 3.64e-34 132
MS.gene03697.t1 AT2G26600 33.716 261 157 10 78 332 11 261 5.53e-33 126
MS.gene03697.t1 AT1G09460 37.931 87 52 2 347 432 136 221 2.41e-12 68.2
MS.gene03697.t1 AT2G43670 36.145 83 48 2 348 427 35 115 3.44e-12 63.9
MS.gene03697.t1 AT1G78520 36.842 95 59 1 336 429 20 114 3.37e-11 60.8

Find 124 sgRNAs with CRISPR-Local

Find 159 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGAGACTACGCATTCTTTC+AGG 0.139189 2.4:+43366249 MS.gene03697:CDS
CTTCTCTTGCTGCTGATTAT+TGG 0.156586 2.4:+43365099 MS.gene03697:CDS
CCAATAGTTATTGGCGAAAT+TGG 0.175001 2.4:+43366379 MS.gene03697:CDS
TAATGAAATGTTGTCTCTTT+TGG 0.177700 2.4:+43365070 MS.gene03697:CDS
TGCTATACTTAAGGCACTTA+TGG 0.189987 2.4:+43365016 MS.gene03697:CDS
TTCTCTTGCTGCTGATTATT+GGG 0.214879 2.4:+43365100 MS.gene03697:CDS
GAACAAGTTGAGTTATGATT+TGG 0.272885 2.4:-43366147 None:intergenic
GACTAAAGACTGTTGTATAT+TGG 0.276101 2.4:-43366017 None:intergenic
CCCTTCCTTACGAGTTATAA+TGG 0.285266 2.4:+43365962 MS.gene03697:CDS
GTTTACACCAATGCATTTGA+TGG 0.294076 2.4:+43366304 MS.gene03697:CDS
GGGTAGTGGCATTCAGGTTA+TGG 0.296268 2.4:+43365037 MS.gene03697:CDS
TATAGATAAAGGCTTGATTA+AGG 0.300529 2.4:+43366954 MS.gene03697:CDS
CAGTGTCTTTCAAAGTTTCC+TGG 0.320680 2.4:-43366571 None:intergenic
AATCAGCCATAGGTGTAAAC+TGG 0.346400 2.4:+43364898 MS.gene03697:CDS
CCAATTTCGCCAATAACTAT+TGG 0.350316 2.4:-43366379 None:intergenic
CTTGTTGGCGTTATAGATAA+AGG 0.352693 2.4:+43366943 MS.gene03697:CDS
GGAGGTTCGTGTAATGAAAT+TGG 0.352837 2.4:+43366790 MS.gene03697:CDS
GGGTAGATATTAACAACAAA+TGG 0.352876 2.4:-43366193 None:intergenic
AAAAGAGACAACATTTCATT+AGG 0.362438 2.4:-43365068 None:intergenic
AGCAGTGATGTTTGCACCTA+TGG 0.365056 2.4:-43366419 None:intergenic
TTAGTCAAAGCAAATCTTGC+TGG 0.366655 2.4:+43366034 MS.gene03697:CDS
GGAAATCTCCATTGTCATAA+AGG 0.372567 2.4:-43366225 None:intergenic
GGTCAGATGCCAATAGTTAT+TGG 0.377249 2.4:+43366370 MS.gene03697:CDS
GGAGCGAAAAGCACCCTTCC+AGG 0.378091 2.4:+43366553 MS.gene03697:CDS
CGCAAAGCTGCGAGTTTGAC+GGG 0.380578 2.4:+43366872 MS.gene03697:CDS
ACTTATGGGTAGTGGCATTC+AGG 0.391263 2.4:+43365031 MS.gene03697:CDS
TATTCATTAAACCTTGGACT+TGG 0.411447 2.4:+43366625 MS.gene03697:CDS
AACAAGTTGAGTTATGATTT+GGG 0.416896 2.4:-43366146 None:intergenic
GCTATACTTAAGGCACTTAT+GGG 0.423306 2.4:+43365017 MS.gene03697:CDS
GTTTCAGCCCTCGGTAAACT+TGG 0.426733 2.4:+43366343 MS.gene03697:CDS
AGCTGCGAGTTTGACGGGCT+TGG 0.429794 2.4:+43366877 MS.gene03697:CDS
GGTAGATATTAACAACAAAT+GGG 0.431716 2.4:-43366192 None:intergenic
TGTTGTATATTGGTTATTGC+GGG 0.432537 2.4:-43366007 None:intergenic
CGAGTTTGACGGGCTTGGTA+TGG 0.440982 2.4:+43366882 MS.gene03697:CDS
TTGAGTATCTTCCATCTAGA+TGG 0.442611 2.4:+43366677 MS.gene03697:CDS
GATATTCTCGTTTGACGGGC+AGG 0.445943 2.4:+43366597 MS.gene03697:CDS
GAGGCCAAACGCTCCTCCTA+TGG 0.447029 2.4:+43366501 MS.gene03697:CDS
AGCTGATCCTGCTATACTTA+AGG 0.456333 2.4:+43365007 MS.gene03697:CDS
GGAGACTACGCATTCTTTCA+GGG 0.456901 2.4:+43366250 MS.gene03697:CDS
GTTCAGTTCCTCAACTCAAA+TGG 0.462422 2.4:+43366166 MS.gene03697:CDS
CTGAAAGAATGCGTAGTCTC+CGG 0.466675 2.4:-43366248 None:intergenic
TGTCATAAAGGCTAAGAAAC+GGG 0.471983 2.4:-43366213 None:intergenic
TTTGCAACACACCATCTAGA+TGG 0.479659 2.4:-43366688 None:intergenic
ATTCATTAAACCTTGGACTT+GGG 0.480625 2.4:+43366626 MS.gene03697:CDS
CGCAGATGCCTACGAATCAT+CGG 0.480869 2.4:+43366084 MS.gene03697:CDS
TGAAAGAATGCGTAGTCTCC+GGG 0.482830 2.4:-43366247 None:intergenic
TAAAAGATTAACCACTGTAG+AGG 0.484785 2.4:-43364949 None:intergenic
TCGCAAAGCTGCGAGTTTGA+CGG 0.494154 2.4:+43366871 MS.gene03697:CDS
TTGTCATAAAGGCTAAGAAA+CGG 0.495803 2.4:-43366214 None:intergenic
TGCAAACATCACTGCTGCTC+GGG 0.498129 2.4:+43366426 MS.gene03697:CDS
CAGGAAACTTTGAAAGACAC+TGG 0.500250 2.4:+43366572 MS.gene03697:CDS
ACGTCCATAGGAGGAGCGTT+TGG 0.503328 2.4:-43366505 None:intergenic
ACCATTATAACTCGTAAGGA+AGG 0.506984 2.4:-43365963 None:intergenic
TGTGCCCCAGTTTACACCTA+TGG 0.508472 2.4:-43364904 None:intergenic
TGTAATGAAATTGGTGAGAA+GGG 0.509554 2.4:+43366799 MS.gene03697:CDS
TAGTTATTGGCGAAATTGGT+TGG 0.509669 2.4:+43366383 MS.gene03697:CDS
CTGTTGTATATTGGTTATTG+CGG 0.513368 2.4:-43366008 None:intergenic
TATGACAATGGAGATTTCCC+CGG 0.518797 2.4:+43366229 MS.gene03697:CDS
TGGCCTTCAGATGGAGCCAT+AGG 0.519415 2.4:+43366403 MS.gene03697:CDS
TACTATAACCAACCACTGAT+AGG 0.520323 2.4:-43366998 None:intergenic
CTTAAGGCACTTATGGGTAG+TGG 0.523915 2.4:+43365023 MS.gene03697:CDS
AGGAGGAGCGTTTGGCCTCA+AGG 0.525104 2.4:-43366497 None:intergenic
GTGCAAACATCACTGCTGCT+CGG 0.525812 2.4:+43366425 MS.gene03697:CDS
AGTGGCATTCAGGTTATGGT+TGG 0.526316 2.4:+43365041 MS.gene03697:CDS
GCTAAGTATTCATTAAACCT+TGG 0.530961 2.4:+43366619 MS.gene03697:CDS
ATAAGTGCCTTAAGTATAGC+AGG 0.532042 2.4:-43365014 None:intergenic
TCTTTCAAAGTTTCCTGGAA+GGG 0.532140 2.4:-43366566 None:intergenic
TTTCTTAGCCTTTATGACAA+TGG 0.533357 2.4:+43366217 MS.gene03697:CDS
GAAATTGGTTGGCCTTCAGA+TGG 0.533521 2.4:+43366394 MS.gene03697:CDS
GACACTTTAGTTTCAGCCCT+CGG 0.534449 2.4:+43366334 MS.gene03697:CDS
GTGTAATGAAATTGGTGAGA+AGG 0.536712 2.4:+43366798 MS.gene03697:CDS
ATCAGCCATAGGTGTAAACT+GGG 0.537370 2.4:+43364899 MS.gene03697:CDS
GTCTTTCAAAGTTTCCTGGA+AGG 0.539981 2.4:-43366567 None:intergenic
CCGAAAAGATAAACGTCCAT+AGG 0.542846 2.4:-43366517 None:intergenic
ATTGACCATTATAACTCGTA+AGG 0.542975 2.4:-43365967 None:intergenic
AAAAGATTAACCACTGTAGA+GGG 0.544738 2.4:-43364948 None:intergenic
GCACCTATGGCTCCATCTGA+AGG 0.546272 2.4:-43366406 None:intergenic
GCAGATGCCTACGAATCATC+GGG 0.547627 2.4:+43366085 MS.gene03697:CDS
ATGGCTGATTCTGCAGCCAT+AGG 0.547876 2.4:-43364885 None:intergenic
TCGGGAGGACTTCCTTCTCA+AGG 0.550523 2.4:+43366103 MS.gene03697:CDS
ATTCCTTGTTCCCAAGTCCA+AGG 0.554908 2.4:-43366636 None:intergenic
GTAGTTTCCATCAAATGCAT+TGG 0.557042 2.4:-43366311 None:intergenic
TCGTAGGCATCTGCGTTGCA+AGG 0.557060 2.4:-43366076 None:intergenic
TGTTACAGGTATATTGCTGT+AGG 0.557209 2.4:+43365932 MS.gene03697:intron
CGGGAGGACTTCCTTCTCAA+GGG 0.560677 2.4:+43366104 MS.gene03697:CDS
ACTTTCCTAGACCCTTCAGT+TGG 0.563537 2.4:+43366907 MS.gene03697:CDS
AAACCTTGGACTTGGGAACA+AGG 0.565820 2.4:+43366633 MS.gene03697:CDS
AATCACCAACTGAAGGGTCT+AGG 0.569011 2.4:-43366912 None:intergenic
AAATGACAATCACCAACTGA+AGG 0.574523 2.4:-43366919 None:intergenic
ATGGGGAGCCATTTGAGTTG+AGG 0.575008 2.4:-43366174 None:intergenic
GCCCTCGGTAAACTTGGATA+CGG 0.577360 2.4:+43366349 MS.gene03697:CDS
AGGAAACTTTGAAAGACACT+GGG 0.581111 2.4:+43366573 MS.gene03697:CDS
AAAAGATAAACGTCCATAGG+AGG 0.586337 2.4:-43366514 None:intergenic
TACATTAGTCAGATCACTCG+AGG 0.586393 2.4:-43366713 None:intergenic
GGAGGAGCGTTTGGCCTCAA+GGG 0.587537 2.4:-43366496 None:intergenic
CCATTATAACTCGTAAGGAA+GGG 0.599569 2.4:-43365962 None:intergenic
TGGTTATTGCGGGTATGACA+AGG 0.599811 2.4:-43365997 None:intergenic
TCAGAAAACCTATCAGTGGT+TGG 0.604617 2.4:+43366990 MS.gene03697:CDS
TATCACATTGCAAGTAACAA+AGG 0.610737 2.4:+43366469 MS.gene03697:CDS
AAGTCCTCCCGATGATTCGT+AGG 0.613873 2.4:-43366092 None:intergenic
ACTACTCATGCTGTAACAGA+TGG 0.614671 2.4:+43366274 MS.gene03697:CDS
TGATTTGGGTCAGTTCAGAA+CGG 0.618597 2.4:-43366132 None:intergenic
ATGGCTGCAGAATCAGCCAT+AGG 0.621586 2.4:+43364888 MS.gene03697:CDS
GAACGGAATACCCCTTGAGA+AGG 0.621717 2.4:-43366115 None:intergenic
CGTAGGCATCTGCGTTGCAA+GGG 0.621828 2.4:-43366075 None:intergenic
ACCGTATCCAAGTTTACCGA+GGG 0.624139 2.4:-43366350 None:intergenic
GATTGCACAACACTTAACTA+CGG 0.625675 2.4:+43366769 MS.gene03697:CDS
ACAAGGAATTGAGAAATGCA+AGG 0.629281 2.4:+43366650 MS.gene03697:CDS
AATGACAATCACCAACTGAA+GGG 0.629772 2.4:-43366918 None:intergenic
ACATTAGTCAGATCACTCGA+GGG 0.642426 2.4:-43366712 None:intergenic
GGGAGGACTTCCTTCTCAAG+GGG 0.649458 2.4:+43366105 MS.gene03697:CDS
CATCTCAGAAAACCTATCAG+TGG 0.661731 2.4:+43366986 MS.gene03697:CDS
TGCACAACACTTAACTACGG+AGG 0.666246 2.4:+43366772 MS.gene03697:CDS
GACCGTATCCAAGTTTACCG+AGG 0.670407 2.4:-43366351 None:intergenic
GAAAGAATGCGTAGTCTCCG+GGG 0.685887 2.4:-43366246 None:intergenic
GTAACAAAGGAACTCCCTTG+AGG 0.688480 2.4:+43366482 MS.gene03697:CDS
GTAGATATTAACAACAAATG+GGG 0.688981 2.4:-43366191 None:intergenic
CAGATTAAAACCCTCTACAG+TGG 0.689359 2.4:+43364938 MS.gene03697:CDS
CATTAGTCAGATCACTCGAG+GGG 0.704853 2.4:-43366711 None:intergenic
TACTTGCAATGTGATAGACA+AGG 0.721404 2.4:-43366462 None:intergenic
GATGCCTACGAATCATCGGG+AGG 0.723386 2.4:+43366088 MS.gene03697:CDS
GGAAACTTTGAAAGACACTG+GGG 0.751395 2.4:+43366574 MS.gene03697:CDS
GAAACTTTGAAAGACACTGG+GGG 0.761288 2.4:+43366575 MS.gene03697:CDS
TCAGCCATAGGTGTAAACTG+GGG 0.797812 2.4:+43364900 MS.gene03697:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGGTAAAATTTAATATTTAT+TGG + chr2.4:43365704-43365723 MS.gene03697:intron 10.0%
!! AATATTCTTATCTGAATCAT+TGG - chr2.4:43365641-43365660 None:intergenic 20.0%
!!! TAAATTTTACCACAATTATC+AGG - chr2.4:43365696-43365715 None:intergenic 20.0%
!!! TGGTTCTTTTTTTTTTTTGA+GGG + chr2.4:43365566-43365585 MS.gene03697:intron 20.0%
!!! TTGGTTCTTTTTTTTTTTTG+AGG + chr2.4:43365565-43365584 MS.gene03697:intron 20.0%
! AAAAGAGACAACATTTCATT+AGG - chr2.4:43365071-43365090 None:intergenic 25.0%
! AACACAAGTTAAAATGTAAG+AGG - chr2.4:43365916-43365935 None:intergenic 25.0%
! AATGTACGGTACTTATATAT+TGG + chr2.4:43365883-43365902 MS.gene03697:intron 25.0%
! ACTGAATCAACATTAAAATC+AGG - chr2.4:43365232-43365251 None:intergenic 25.0%
! ATAAACTTACCTGATAATTG+TGG + chr2.4:43365684-43365703 MS.gene03697:intron 25.0%
! CTAGATTCTCTTAAAATGTA+CGG + chr2.4:43365869-43365888 MS.gene03697:intron 25.0%
! CTGAATCAACATTAAAATCA+GGG - chr2.4:43365231-43365250 None:intergenic 25.0%
! GGTAGATATTAACAACAAAT+GGG - chr2.4:43366195-43366214 None:intergenic 25.0%
! GTAGATATTAACAACAAATG+GGG - chr2.4:43366194-43366213 None:intergenic 25.0%
! TATAGATAAAGGCTTGATTA+AGG + chr2.4:43366954-43366973 MS.gene03697:CDS 25.0%
! TTGAATATTGTGAAGAACTT+AGG + chr2.4:43365464-43365483 MS.gene03697:intron 25.0%
!! AACAAGTTGAGTTATGATTT+GGG - chr2.4:43366149-43366168 None:intergenic 25.0%
!! AATGAAATGTTGTCTCTTTT+GGG + chr2.4:43365071-43365090 MS.gene03697:CDS 25.0%
!! GTACTGTTAAATTTTTACCA+AGG + chr2.4:43365273-43365292 MS.gene03697:intron 25.0%
!! TAATGAAATGTTGTCTCTTT+TGG + chr2.4:43365070-43365089 MS.gene03697:CDS 25.0%
!!! ATCAGGTTTTGTTTTAATCT+TGG + chr2.4:43365167-43365186 MS.gene03697:intron 25.0%
!!! TACATTTTAACTTGTGTTAC+AGG + chr2.4:43365918-43365937 MS.gene03697:intron 25.0%
!!! TTTCTGCTTTTATGACTAAA+GGG + chr2.4:43365135-43365154 MS.gene03697:CDS 25.0%
AAAAGATTAACCACTGTAGA+GGG - chr2.4:43364951-43364970 None:intergenic 30.0%
ATTCATTAAACCTTGGACTT+GGG + chr2.4:43366626-43366645 MS.gene03697:CDS 30.0%
ATTGACCATTATAACTCGTA+AGG - chr2.4:43365970-43365989 None:intergenic 30.0%
CAAAATATTCATCTGCGTTA+CGG - chr2.4:43365813-43365832 None:intergenic 30.0%
GACTAAAGACTGTTGTATAT+TGG - chr2.4:43366020-43366039 None:intergenic 30.0%
GAGATCACATAAACTACAAA+AGG - chr2.4:43365848-43365867 None:intergenic 30.0%
GCTAAGTATTCATTAAACCT+TGG + chr2.4:43366619-43366638 MS.gene03697:CDS 30.0%
GGGTAGATATTAACAACAAA+TGG - chr2.4:43366196-43366215 None:intergenic 30.0%
TAAAAGATTAACCACTGTAG+AGG - chr2.4:43364952-43364971 None:intergenic 30.0%
TATCACATTGCAAGTAACAA+AGG + chr2.4:43366469-43366488 MS.gene03697:CDS 30.0%
TATTCATTAAACCTTGGACT+TGG + chr2.4:43366625-43366644 MS.gene03697:CDS 30.0%
TGTAATGAAATTGGTGAGAA+GGG + chr2.4:43366799-43366818 MS.gene03697:CDS 30.0%
TTGTCATAAAGGCTAAGAAA+CGG - chr2.4:43366217-43366236 None:intergenic 30.0%
! CTGTTGTATATTGGTTATTG+CGG - chr2.4:43366011-43366030 None:intergenic 30.0%
! GAACAAGTTGAGTTATGATT+TGG - chr2.4:43366150-43366169 None:intergenic 30.0%
! TGTTGTATATTGGTTATTGC+GGG - chr2.4:43366010-43366029 None:intergenic 30.0%
! TTTCTTAGCCTTTATGACAA+TGG + chr2.4:43366217-43366236 MS.gene03697:CDS 30.0%
!! CATAAACTACAAAAGGTGTT+TGG - chr2.4:43365841-43365860 None:intergenic 30.0%
!! GTTTCTGCTTTTATGACTAA+AGG + chr2.4:43365134-43365153 MS.gene03697:CDS 30.0%
!! TCGTAACAGTTTTGATCTTT+TGG + chr2.4:43365546-43365565 MS.gene03697:intron 30.0%
!! TTCTGCTTTTATGACTAAAG+GGG + chr2.4:43365136-43365155 MS.gene03697:CDS 30.0%
!!! TTTTTTGAGGGATGATCTTT+TGG + chr2.4:43365578-43365597 MS.gene03697:intron 30.0%
AAAAGATAAACGTCCATAGG+AGG - chr2.4:43366517-43366536 None:intergenic 35.0%
AAATGACAATCACCAACTGA+AGG - chr2.4:43366922-43366941 None:intergenic 35.0%
AATGACAATCACCAACTGAA+GGG - chr2.4:43366921-43366940 None:intergenic 35.0%
ACAAGGAATTGAGAAATGCA+AGG + chr2.4:43366650-43366669 MS.gene03697:CDS 35.0%
ACCATTATAACTCGTAAGGA+AGG - chr2.4:43365966-43365985 None:intergenic 35.0%
ATAAGTGCCTTAAGTATAGC+AGG - chr2.4:43365017-43365036 None:intergenic 35.0%
CAGTAACTATAACTACTCCT+TGG - chr2.4:43365293-43365312 None:intergenic 35.0%
CCAATAGTTATTGGCGAAAT+TGG + chr2.4:43366379-43366398 MS.gene03697:CDS 35.0%
CCAATTTCGCCAATAACTAT+TGG - chr2.4:43366382-43366401 None:intergenic 35.0%
CCATTATAACTCGTAAGGAA+GGG - chr2.4:43365965-43365984 None:intergenic 35.0%
CTTGTTGGCGTTATAGATAA+AGG + chr2.4:43366943-43366962 MS.gene03697:CDS 35.0%
GATTGCACAACACTTAACTA+CGG + chr2.4:43366769-43366788 MS.gene03697:CDS 35.0%
GGAAATCTCCATTGTCATAA+AGG - chr2.4:43366228-43366247 None:intergenic 35.0%
GTAGTTTCCATCAAATGCAT+TGG - chr2.4:43366314-43366333 None:intergenic 35.0%
GTGTAATGAAATTGGTGAGA+AGG + chr2.4:43366798-43366817 MS.gene03697:CDS 35.0%
GTTTACACCAATGCATTTGA+TGG + chr2.4:43366304-43366323 MS.gene03697:CDS 35.0%
TACTTGCAATGTGATAGACA+AGG - chr2.4:43366465-43366484 None:intergenic 35.0%
TAGTTATTGGCGAAATTGGT+TGG + chr2.4:43366383-43366402 MS.gene03697:CDS 35.0%
TCTTTCAAAGTTTCCTGGAA+GGG - chr2.4:43366569-43366588 None:intergenic 35.0%
TGTCATAAAGGCTAAGAAAC+GGG - chr2.4:43366216-43366235 None:intergenic 35.0%
TGTTACAGGTATATTGCTGT+AGG + chr2.4:43365932-43365951 MS.gene03697:intron 35.0%
TTAGTCAAAGCAAATCTTGC+TGG + chr2.4:43366034-43366053 MS.gene03697:CDS 35.0%
TTGAGTATCTTCCATCTAGA+TGG + chr2.4:43366677-43366696 MS.gene03697:CDS 35.0%
! AGGAAACTTTGAAAGACACT+GGG + chr2.4:43366573-43366592 MS.gene03697:CDS 35.0%
! CACTGCAAGCAATTTTCATA+TGG - chr2.4:43366744-43366763 None:intergenic 35.0%
! CCTATGGACGTTTATCTTTT+CGG + chr2.4:43366517-43366536 MS.gene03697:CDS 35.0%
! CTTTTCGGTCTATTTGATGA+AGG + chr2.4:43366532-43366551 MS.gene03697:CDS 35.0%
! GCTATACTTAAGGCACTTAT+GGG + chr2.4:43365017-43365036 MS.gene03697:CDS 35.0%
! TGCTATACTTAAGGCACTTA+TGG + chr2.4:43365016-43365035 MS.gene03697:CDS 35.0%
! TTCTCTTGCTGCTGATTATT+GGG + chr2.4:43365100-43365119 MS.gene03697:CDS 35.0%
! TTGGTTCTTAGTTGCAAGTT+TGG + chr2.4:43365597-43365616 MS.gene03697:intron 35.0%
!! GGTACTTATATATTGGCTTC+AGG + chr2.4:43365890-43365909 MS.gene03697:intron 35.0%
!! TCTGCTTTTATGACTAAAGG+GGG + chr2.4:43365137-43365156 MS.gene03697:CDS 35.0%
!!! GGTGATTGTCATTTTCTTGT+TGG + chr2.4:43366928-43366947 MS.gene03697:CDS 35.0%
AATCAGCCATAGGTGTAAAC+TGG + chr2.4:43364898-43364917 MS.gene03697:CDS 40.0%
ACATTAGTCAGATCACTCGA+GGG - chr2.4:43366715-43366734 None:intergenic 40.0%
ACTACTCATGCTGTAACAGA+TGG + chr2.4:43366274-43366293 MS.gene03697:CDS 40.0%
AGCTGATCCTGCTATACTTA+AGG + chr2.4:43365007-43365026 MS.gene03697:CDS 40.0%
ATCAGCCATAGGTGTAAACT+GGG + chr2.4:43364899-43364918 MS.gene03697:CDS 40.0%
CAGATTAAAACCCTCTACAG+TGG + chr2.4:43364938-43364957 MS.gene03697:CDS 40.0%
CAGTGTCTTTCAAAGTTTCC+TGG - chr2.4:43366574-43366593 None:intergenic 40.0%
CATCTCAGAAAACCTATCAG+TGG + chr2.4:43366986-43367005 MS.gene03697:CDS 40.0%
CCCTTCCTTACGAGTTATAA+TGG + chr2.4:43365962-43365981 MS.gene03697:CDS 40.0%
CCGAAAAGATAAACGTCCAT+AGG - chr2.4:43366520-43366539 None:intergenic 40.0%
GGAGGTTCGTGTAATGAAAT+TGG + chr2.4:43366790-43366809 MS.gene03697:CDS 40.0%
GGTCAGATGCCAATAGTTAT+TGG + chr2.4:43366370-43366389 MS.gene03697:CDS 40.0%
GTCTTTCAAAGTTTCCTGGA+AGG - chr2.4:43366570-43366589 None:intergenic 40.0%
GTTCAGTTCCTCAACTCAAA+TGG + chr2.4:43366166-43366185 MS.gene03697:CDS 40.0%
TACATTAGTCAGATCACTCG+AGG - chr2.4:43366716-43366735 None:intergenic 40.0%
TATGACAATGGAGATTTCCC+CGG + chr2.4:43366229-43366248 MS.gene03697:CDS 40.0%
TCAGAAAACCTATCAGTGGT+TGG + chr2.4:43366990-43367009 MS.gene03697:CDS 40.0%
TTTGCAACACACCATCTAGA+TGG - chr2.4:43366691-43366710 None:intergenic 40.0%
! CAGGAAACTTTGAAAGACAC+TGG + chr2.4:43366572-43366591 MS.gene03697:CDS 40.0%
! CTTCTCTTGCTGCTGATTAT+TGG + chr2.4:43365099-43365118 MS.gene03697:CDS 40.0%
! GAAACTTTGAAAGACACTGG+GGG + chr2.4:43366575-43366594 MS.gene03697:CDS 40.0%
! GAAATGTTGTCTCTTTTGGG+TGG + chr2.4:43365074-43365093 MS.gene03697:CDS 40.0%
! GGAAACTTTGAAAGACACTG+GGG + chr2.4:43366574-43366593 MS.gene03697:CDS 40.0%
! TGATTTGGGTCAGTTCAGAA+CGG - chr2.4:43366135-43366154 None:intergenic 40.0%
AAACCTTGGACTTGGGAACA+AGG + chr2.4:43366633-43366652 MS.gene03697:CDS 45.0%
AATCACCAACTGAAGGGTCT+AGG - chr2.4:43366915-43366934 None:intergenic 45.0%
ACCGTATCCAAGTTTACCGA+GGG - chr2.4:43366353-43366372 None:intergenic 45.0%
ACTTTCCTAGACCCTTCAGT+TGG + chr2.4:43366907-43366926 MS.gene03697:CDS 45.0%
AGCAGTGATGTTTGCACCTA+TGG - chr2.4:43366422-43366441 None:intergenic 45.0%
ATTCCTTGTTCCCAAGTCCA+AGG - chr2.4:43366639-43366658 None:intergenic 45.0%
CATTAGTCAGATCACTCGAG+GGG - chr2.4:43366714-43366733 None:intergenic 45.0%
CTGAAAGAATGCGTAGTCTC+CGG - chr2.4:43366251-43366270 None:intergenic 45.0%
GGAGACTACGCATTCTTTCA+GGG + chr2.4:43366250-43366269 MS.gene03697:CDS 45.0%
GTAACAAAGGAACTCCCTTG+AGG + chr2.4:43366482-43366501 MS.gene03697:CDS 45.0%
TCAGCCATAGGTGTAAACTG+GGG + chr2.4:43364900-43364919 MS.gene03697:CDS 45.0%
TGAAAGAATGCGTAGTCTCC+GGG - chr2.4:43366250-43366269 None:intergenic 45.0%
TGCACAACACTTAACTACGG+AGG + chr2.4:43366772-43366791 MS.gene03697:CDS 45.0%
TGGGGGATATTCTCGTTTGA+CGG + chr2.4:43366592-43366611 MS.gene03697:CDS 45.0%
TGGTTATTGCGGGTATGACA+AGG - chr2.4:43366000-43366019 None:intergenic 45.0%
! ACTTATGGGTAGTGGCATTC+AGG + chr2.4:43365031-43365050 MS.gene03697:CDS 45.0%
! AGTGGCATTCAGGTTATGGT+TGG + chr2.4:43365041-43365060 MS.gene03697:CDS 45.0%
! CTTAAGGCACTTATGGGTAG+TGG + chr2.4:43365023-43365042 MS.gene03697:CDS 45.0%
! GACACTTTAGTTTCAGCCCT+CGG + chr2.4:43366334-43366353 MS.gene03697:CDS 45.0%
!! GAAATTGGTTGGCCTTCAGA+TGG + chr2.4:43366394-43366413 MS.gene03697:CDS 45.0%
AAGTCCTCCCGATGATTCGT+AGG - chr2.4:43366095-43366114 None:intergenic 50.0%
ATGGCTGCAGAATCAGCCAT+AGG + chr2.4:43364888-43364907 MS.gene03697:CDS 50.0%
CGCAGATGCCTACGAATCAT+CGG + chr2.4:43366084-43366103 MS.gene03697:CDS 50.0%
CGGAGACTACGCATTCTTTC+AGG + chr2.4:43366249-43366268 MS.gene03697:CDS 50.0%
GAAAGAATGCGTAGTCTCCG+GGG - chr2.4:43366249-43366268 None:intergenic 50.0%
GAACGGAATACCCCTTGAGA+AGG - chr2.4:43366118-43366137 None:intergenic 50.0%
GACCGTATCCAAGTTTACCG+AGG - chr2.4:43366354-43366373 None:intergenic 50.0%
GCAGATGCCTACGAATCATC+GGG + chr2.4:43366085-43366104 MS.gene03697:CDS 50.0%
GCCCTCGGTAAACTTGGATA+CGG + chr2.4:43366349-43366368 MS.gene03697:CDS 50.0%
GGGGGATATTCTCGTTTGAC+GGG + chr2.4:43366593-43366612 MS.gene03697:CDS 50.0%
GTGCAAACATCACTGCTGCT+CGG + chr2.4:43366425-43366444 MS.gene03697:CDS 50.0%
GTTTCAGCCCTCGGTAAACT+TGG + chr2.4:43366343-43366362 MS.gene03697:CDS 50.0%
TCGCAAAGCTGCGAGTTTGA+CGG + chr2.4:43366871-43366890 MS.gene03697:CDS 50.0%
TGCAAACATCACTGCTGCTC+GGG + chr2.4:43366426-43366445 MS.gene03697:CDS 50.0%
TGTGCCCCAGTTTACACCTA+TGG - chr2.4:43364907-43364926 None:intergenic 50.0%
! GATATTCTCGTTTGACGGGC+AGG + chr2.4:43366597-43366616 MS.gene03697:CDS 50.0%
! GCTGCTCGGGTTTTCAATCA+AGG + chr2.4:43366439-43366458 MS.gene03697:CDS 50.0%
! GGGTAGTGGCATTCAGGTTA+TGG + chr2.4:43365037-43365056 MS.gene03697:CDS 50.0%
!! ATGGGGAGCCATTTGAGTTG+AGG - chr2.4:43366177-43366196 None:intergenic 50.0%
!! CTAAAGGGGGTGCTGATATC+AGG + chr2.4:43365150-43365169 MS.gene03697:CDS 50.0%
CGCAAAGCTGCGAGTTTGAC+GGG + chr2.4:43366872-43366891 MS.gene03697:CDS 55.0%
CGGGAGGACTTCCTTCTCAA+GGG + chr2.4:43366104-43366123 MS.gene03697:CDS 55.0%
CGTAGGCATCTGCGTTGCAA+GGG - chr2.4:43366078-43366097 None:intergenic 55.0%
GATGCCTACGAATCATCGGG+AGG + chr2.4:43366088-43366107 MS.gene03697:CDS 55.0%
GCACCTATGGCTCCATCTGA+AGG - chr2.4:43366409-43366428 None:intergenic 55.0%
GGGAGGACTTCCTTCTCAAG+GGG + chr2.4:43366105-43366124 MS.gene03697:CDS 55.0%
TCGGGAGGACTTCCTTCTCA+AGG + chr2.4:43366103-43366122 MS.gene03697:CDS 55.0%
TCGTAGGCATCTGCGTTGCA+AGG - chr2.4:43366079-43366098 None:intergenic 55.0%
TGGCCTTCAGATGGAGCCAT+AGG + chr2.4:43366403-43366422 MS.gene03697:CDS 55.0%
!! ACGTCCATAGGAGGAGCGTT+TGG - chr2.4:43366508-43366527 None:intergenic 55.0%
!! CGAGTTTGACGGGCTTGGTA+TGG + chr2.4:43366882-43366901 MS.gene03697:CDS 55.0%
GAGGCCAAACGCTCCTCCTA+TGG + chr2.4:43366501-43366520 MS.gene03697:CDS 60.0%
!! AGCTGCGAGTTTGACGGGCT+TGG + chr2.4:43366877-43366896 MS.gene03697:CDS 60.0%
!! AGGAGGAGCGTTTGGCCTCA+AGG - chr2.4:43366500-43366519 None:intergenic 60.0%
!! GGAGCGAAAAGCACCCTTCC+AGG + chr2.4:43366553-43366572 MS.gene03697:CDS 60.0%
!! GGAGGAGCGTTTGGCCTCAA+GGG - chr2.4:43366499-43366518 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 43364888 43367017 43364888 ID=MS.gene03697
chr2.4 mRNA 43364888 43367017 43364888 ID=MS.gene03697.t1;Parent=MS.gene03697
chr2.4 exon 43364888 43365171 43364888 ID=MS.gene03697.t1.exon1;Parent=MS.gene03697.t1
chr2.4 CDS 43364888 43365171 43364888 ID=cds.MS.gene03697.t1;Parent=MS.gene03697.t1
chr2.4 exon 43365940 43367017 43365940 ID=MS.gene03697.t1.exon2;Parent=MS.gene03697.t1
chr2.4 CDS 43365940 43367017 43365940 ID=cds.MS.gene03697.t1;Parent=MS.gene03697.t1
Gene Sequence

>MS.gene03697

ATGGCTGCAGAATCAGCCATAGGTGTAAACTGGGGCACACTATCTTCACACAGATTAAAACCCTCTACAGTGGTTAATCTTTTAAGAGATAACAAGATCTCAAAAGTGAAGCTTTTTGAAGCTGATCCTGCTATACTTAAGGCACTTATGGGTAGTGGCATTCAGGTTATGGTTGGTATACCTAATGAAATGTTGTCTCTTTTGGGTGGTTCTTCTCTTGCTGCTGATTATTGGGTTCAAAGAAATGTTTCTGCTTTTATGACTAAAGGGGGTGCTGATATCAGGTTTTGTTTTAATCTTGGCTCAGATTTAGTTTTGATCTGATTAGTTAACTTTTAAACCCTGATTTTAATGTTGATTCAGTATAATGAAGAATGTTTTATTTGTACTGTTAAATTTTTACCAAGGAGTAGTTATAGTTACTGTGTTTAAGTATCAGTTACTTACTCTATTTGTTTAATTTGTTTTAGTTTTAAATTTTTTGATAAATTGTTAATTAAGCTGATGACAGTGACTATGAGCATTGAGCAGATTTGTTTTACTCTAAAGTTGTTGATGTTAGCAGTTAGTGATTGTTTGAATATTGTGAAGAACTTAGGATGAATCATTCTGCAAAAAATATATAGTTTTGATCAAGACTTAAAAGTGTTTTGTGTTATCGTAACAGTTTTGATCTTTTGGTTCTTTTTTTTTTTTGAGGGATGATCTTTTGGTTCTTAGTTGCAAGTTTGGATTGATTATTAGTTGTGACCAATGATTCAGATAAGAATATTTGTCTTTTGTGCGATAAAAAGTTATAAACTTACCTGATAATTGTGGTAAAATTTAATATTTATTGGATTTTGATCTAGTTCTGAATTATAGCTTTCTAAAACAGAAACTATAGTAGACAGTAGCATAAGTTTTCATTATTGTTTTCTCTCCGTAACGCAGATGAATATTTTGTTCTACCAAACACCTTTTGTAGTTTATGTGATCTCGCTAGATTCTCTTAAAATGTACGGTACTTATATATTGGCTTCAGGCCTCTTACATTTTAACTTGTGTTACAGGTATATTGCTGTAGGAAATGAACCCTTCCTTACGAGTTATAATGGTCAATTTATAAACCTTGTCATACCCGCAATAACCAATATACAACAGTCTTTAGTCAAAGCAAATCTTGCTGGTTATGTAAAGATAGTTGTCCCTTGCAACGCAGATGCCTACGAATCATCGGGAGGACTTCCTTCTCAAGGGGTATTCCGTTCTGAACTGACCCAAATCATAACTCAACTTGTTCAGTTCCTCAACTCAAATGGCTCCCCATTTGTTGTTAATATCTACCCGTTTCTTAGCCTTTATGACAATGGAGATTTCCCCGGAGACTACGCATTCTTTCAGGGAACTACTCATGCTGTAACAGATGGTTCAAATGTTTACACCAATGCATTTGATGGAAACTACGACACTTTAGTTTCAGCCCTCGGTAAACTTGGATACGGTCAGATGCCAATAGTTATTGGCGAAATTGGTTGGCCTTCAGATGGAGCCATAGGTGCAAACATCACTGCTGCTCGGGTTTTCAATCAAGGCCTTGTCTATCACATTGCAAGTAACAAAGGAACTCCCTTGAGGCCAAACGCTCCTCCTATGGACGTTTATCTTTTCGGTCTATTTGATGAAGGAGCGAAAAGCACCCTTCCAGGAAACTTTGAAAGACACTGGGGGATATTCTCGTTTGACGGGCAGGCTAAGTATTCATTAAACCTTGGACTTGGGAACAAGGAATTGAGAAATGCAAGGAATGTTGAGTATCTTCCATCTAGATGGTGTGTTGCAAACCCCTCGAGTGATCTGACTAATGTAGTAAACCATATGAAAATTGCTTGCAGTGTTGCAGATTGCACAACACTTAACTACGGAGGTTCGTGTAATGAAATTGGTGAGAAGGGTAACATATCATATGCTTTTAACAGCTACTATCAGCTAAGAATGCAAGATTCGCAAAGCTGCGAGTTTGACGGGCTTGGTATGGTTACTTTCCTAGACCCTTCAGTTGGTGATTGTCATTTTCTTGTTGGCGTTATAGATAAAGGCTTGATTAAGGATTCATCTGCATCTCAGAAAACCTATCAGTGGTTGGTTATA
Protein sequence

>MS.gene03697.t1

MAAESAIGVNWGTLSSHRLKPSTVVNLLRDNKISKVKLFEADPAILKALMGSGIQVMVGIPNEMLSLLGGSSLAADYWVQRNVSAFMTKGGADIRYIAVGNEPFLTSYNGQFINLVIPAITNIQQSLVKANLAGYVKIVVPCNADAYESSGGLPSQGVFRSELTQIITQLVQFLNSNGSPFVVNIYPFLSLYDNGDFPGDYAFFQGTTHAVTDGSNVYTNAFDGNYDTLVSALGKLGYGQMPIVIGEIGWPSDGAIGANITAARVFNQGLVYHIASNKGTPLRPNAPPMDVYLFGLFDEGAKSTLPGNFERHWGIFSFDGQAKYSLNLGLGNKELRNARNVEYLPSRWCVANPSSDLTNVVNHMKIACSVADCTTLNYGGSCNEIGEKGNISYAFNSYYQLRMQDSQSCEFDGLGMVTFLDPSVGDCHFLVGVIDKGLIKDSSASQKTYQWLVI