Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037039.t1 | XP_024632321.1 | 94.9 | 391 | 12 | 2 | 1 | 389 | 1 | 385 | 3.80E-209 | 737.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037039.t1 | Q9SW00 | 54.4 | 390 | 166 | 5 | 1 | 387 | 1 | 381 | 4.2e-116 | 419.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037039.t1 | G7INK5 | 94.8 | 387 | 12 | 2 | 5 | 389 | 2 | 382 | 4.3e-207 | 729.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene032779 | MS.gene037039 | PPI |
| MS.gene037039 | MS.gene49595 | PPI |
| MS.gene066288 | MS.gene037039 | PPI |
| MS.gene99026 | MS.gene037039 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037039.t1 | MTR_2g037770 | 94.832 | 387 | 12 | 2 | 5 | 389 | 2 | 382 | 0.0 | 743 |
| MS.gene037039.t1 | MTR_2g037770 | 94.118 | 306 | 10 | 2 | 3 | 306 | 1 | 300 | 0.0 | 587 |
| MS.gene037039.t1 | MTR_2g037770 | 94.408 | 304 | 9 | 2 | 5 | 306 | 2 | 299 | 0.0 | 584 |
| MS.gene037039.t1 | MTR_2g037790 | 70.256 | 390 | 109 | 2 | 1 | 389 | 1 | 384 | 0.0 | 566 |
| MS.gene037039.t1 | MTR_2g037790 | 71.654 | 381 | 101 | 2 | 10 | 389 | 13 | 387 | 0.0 | 566 |
| MS.gene037039.t1 | MTR_4g127510 | 66.753 | 388 | 119 | 4 | 6 | 389 | 1 | 382 | 0.0 | 520 |
| MS.gene037039.t1 | MTR_2g037770 | 93.040 | 273 | 11 | 2 | 4 | 274 | 1 | 267 | 0.0 | 516 |
| MS.gene037039.t1 | MTR_4g127490 | 67.273 | 385 | 113 | 5 | 10 | 387 | 16 | 394 | 0.0 | 515 |
| MS.gene037039.t1 | MTR_4g127490 | 67.273 | 385 | 113 | 5 | 10 | 387 | 14 | 392 | 0.0 | 514 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037039.t1 | AT4G25850 | 54.359 | 390 | 166 | 5 | 1 | 387 | 1 | 381 | 8.58e-148 | 424 |
| MS.gene037039.t1 | AT4G25850 | 54.359 | 390 | 166 | 5 | 1 | 387 | 103 | 483 | 6.56e-146 | 423 |
| MS.gene037039.t1 | AT5G57240 | 52.208 | 385 | 172 | 5 | 6 | 387 | 1 | 376 | 2.74e-144 | 415 |
| MS.gene037039.t1 | AT5G57240 | 52.208 | 385 | 172 | 5 | 6 | 387 | 1 | 376 | 2.74e-144 | 415 |
| MS.gene037039.t1 | AT5G57240 | 52.208 | 385 | 172 | 5 | 6 | 387 | 1 | 376 | 2.74e-144 | 415 |
| MS.gene037039.t1 | AT5G57240 | 49.386 | 407 | 169 | 6 | 10 | 388 | 5 | 402 | 3.54e-139 | 402 |
| MS.gene037039.t1 | AT5G57240 | 49.386 | 407 | 169 | 6 | 10 | 388 | 5 | 402 | 3.54e-139 | 402 |
| MS.gene037039.t1 | AT4G25860 | 52.564 | 390 | 171 | 6 | 2 | 387 | 3 | 382 | 4.08e-138 | 399 |
| MS.gene037039.t1 | AT4G25860 | 53.403 | 382 | 164 | 6 | 10 | 387 | 5 | 376 | 2.32e-137 | 397 |
| MS.gene037039.t1 | AT4G25850 | 55.474 | 274 | 111 | 4 | 1 | 271 | 1 | 266 | 1.74e-101 | 301 |
| MS.gene037039.t1 | AT5G02100 | 27.463 | 335 | 211 | 12 | 47 | 362 | 51 | 372 | 1.78e-17 | 84.0 |
| MS.gene037039.t1 | AT5G02100 | 27.463 | 335 | 211 | 12 | 47 | 362 | 78 | 399 | 2.78e-17 | 83.6 |
| MS.gene037039.t1 | AT5G59420 | 27.219 | 338 | 214 | 12 | 47 | 365 | 78 | 402 | 1.67e-16 | 81.3 |
| MS.gene037039.t1 | AT3G09300 | 27.114 | 343 | 210 | 13 | 47 | 366 | 83 | 408 | 3.89e-16 | 80.1 |
Find 90 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGTTCTCTTTACAGTTAA+TGG | 0.170443 | 2.1:+52803201 | MS.gene037039:CDS |
| ATAAGAATTCTTCCTGTTAC+TGG | 0.231549 | 2.1:+52803036 | MS.gene037039:CDS |
| GAATCACTTCTTAACGAAAA+TGG | 0.254434 | 2.1:-52799970 | None:intergenic |
| CAACTGAATCGGCTCTTATT+TGG | 0.268015 | 2.1:+52804097 | MS.gene037039:CDS |
| GCTCCTTATAATCCAATTCT+TGG | 0.280213 | 2.1:+52801851 | MS.gene037039:CDS |
| AGAATTCTTATAAAGAGATT+TGG | 0.285918 | 2.1:-52803024 | None:intergenic |
| AGTCAATCATTCTTCGGATT+TGG | 0.289226 | 2.1:+52803129 | MS.gene037039:CDS |
| TCACCAAGAATTGGATTATA+AGG | 0.307580 | 2.1:-52801854 | None:intergenic |
| TGAGACAGTATGAAATGTTT+AGG | 0.317403 | 2.1:-52804243 | None:intergenic |
| TCCTGTTACTGGAGTTGATT+GGG | 0.344104 | 2.1:+52803047 | MS.gene037039:CDS |
| TGGTAATAGAAGATTAATAA+AGG | 0.358423 | 2.1:+52803152 | MS.gene037039:CDS |
| TTCCTGTTACTGGAGTTGAT+TGG | 0.361020 | 2.1:+52803046 | MS.gene037039:CDS |
| TTCCCAGTCTTTGCTCAAGA+TGG | 0.372216 | 2.1:-52804136 | None:intergenic |
| CTCAAAGCAAAGAAGGGTCT+TGG | 0.373124 | 2.1:+52804262 | MS.gene037039:CDS |
| GACTTTGGAAAGTTGAATAA+TGG | 0.375860 | 2.1:-52801683 | None:intergenic |
| ACAAATTACAAGGTTACAAT+AGG | 0.388938 | 2.1:-52804321 | None:intergenic |
| AATATACGTTGCAATAGATT+AGG | 0.395019 | 2.1:-52800018 | None:intergenic |
| TGATGAGTCTCACCAAGAAT+TGG | 0.396025 | 2.1:-52801863 | None:intergenic |
| TCTTTACAGTTAATGGTCAC+TGG | 0.403190 | 2.1:+52803208 | MS.gene037039:CDS |
| ACCCAATCAACTCCAGTAAC+AGG | 0.403466 | 2.1:-52803048 | None:intergenic |
| TACATAAGTCAATCATTCTT+CGG | 0.404845 | 2.1:+52803123 | MS.gene037039:CDS |
| AGTCTTTGCTCAAGATGGCT+TGG | 0.411471 | 2.1:-52804131 | None:intergenic |
| AGGAACCCAAGTTTCTCCTT+TGG | 0.413382 | 2.1:-52804223 | None:intergenic |
| TAGCATTGAAGTTGTGACTT+TGG | 0.417021 | 2.1:-52801698 | None:intergenic |
| GGTAATAGAAGATTAATAAA+GGG | 0.417175 | 2.1:+52803153 | MS.gene037039:CDS |
| TTACTGGAGTTGATTGGGTT+GGG | 0.426008 | 2.1:+52803052 | MS.gene037039:CDS |
| AACATCAGGTGTATAGAAAC+AGG | 0.435930 | 2.1:+52803081 | MS.gene037039:CDS |
| TCTTAATGTCCTACTAGAAC+AGG | 0.449092 | 2.1:+52801901 | MS.gene037039:CDS |
| TCAAAGCAAAGAAGGGTCTT+GGG | 0.449719 | 2.1:+52804263 | MS.gene037039:CDS |
| CAGTTAATGGTCACTGGGAT+AGG | 0.453037 | 2.1:+52803214 | MS.gene037039:CDS |
| ATGCTAAAGAAGTCATTTCA+AGG | 0.455627 | 2.1:+52803416 | MS.gene037039:CDS |
| TAGGACATTAAGATTTCCCT+TGG | 0.465061 | 2.1:-52801891 | None:intergenic |
| GTGCGTGTGGCCAACTGAAT+CGG | 0.466853 | 2.1:+52804086 | MS.gene037039:intron |
| CCGTCTCATCAGTTGCATGA+AGG | 0.468315 | 2.1:-52802571 | None:intergenic |
| CTTTACAGTTAATGGTCACT+GGG | 0.473952 | 2.1:+52803209 | MS.gene037039:CDS |
| GAGAGTCCAAAGGAGAAACT+TGG | 0.475652 | 2.1:+52804217 | MS.gene037039:CDS |
| CGGAAAACATAGAAATCATA+TGG | 0.479297 | 2.1:+52802591 | MS.gene037039:CDS |
| ATACAAGTAATGGTGAAGAA+AGG | 0.481881 | 2.1:+52803383 | MS.gene037039:CDS |
| CAATCATTCTTCGGATTTGG+TGG | 0.485877 | 2.1:+52803132 | MS.gene037039:CDS |
| TATCCTGCTGCAAAGTTCAA+TGG | 0.486814 | 2.1:+52802620 | MS.gene037039:CDS |
| CGTCTCATCAGTTGCATGAA+GGG | 0.488124 | 2.1:-52802570 | None:intergenic |
| AAGCTCAGGTGCACGGAAAA+CGG | 0.491909 | 2.1:+52802956 | MS.gene037039:CDS |
| CATATGTCTCTCCATGATTG+AGG | 0.492960 | 2.1:-52802990 | None:intergenic |
| ATACTGTCTCAAAGCAAAGA+AGG | 0.493843 | 2.1:+52804255 | MS.gene037039:CDS |
| GTTACTGGAGTTGATTGGGT+TGG | 0.494586 | 2.1:+52803051 | MS.gene037039:CDS |
| AAGCCATCTTGAGCAAAGAC+TGG | 0.494838 | 2.1:+52804133 | MS.gene037039:CDS |
| AAACTGAGGCTCCTCAATCA+TGG | 0.503738 | 2.1:+52802979 | MS.gene037039:CDS |
| TACAAGTAATGGTGAAGAAA+GGG | 0.504165 | 2.1:+52803384 | MS.gene037039:CDS |
| AGGTACTTCAGTGGAAGCTC+AGG | 0.510651 | 2.1:+52802942 | MS.gene037039:intron |
| GGGTTGGGAGTGTCAACATC+AGG | 0.514019 | 2.1:+52803067 | MS.gene037039:CDS |
| CATCCTTGACAGTAGGAGCT+TGG | 0.517595 | 2.1:-52803441 | None:intergenic |
| GCATGAAGGGCAGATACAGC+AGG | 0.518949 | 2.1:-52802557 | None:intergenic |
| AATTTGCTATATGGAGATGC+AGG | 0.519490 | 2.1:+52799918 | None:intergenic |
| TTACCATTGAACTTTGCAGC+AGG | 0.521587 | 2.1:-52802623 | None:intergenic |
| ACTGTTTACCTATTCAAAAG+TGG | 0.524403 | 2.1:+52804286 | MS.gene037039:CDS |
| AAACTATATGACAAATTACA+AGG | 0.530316 | 2.1:-52804331 | None:intergenic |
| AAACATGTACCTGTTCTAGT+AGG | 0.534118 | 2.1:-52801910 | None:intergenic |
| AAGTCACAACTTCAATGCTA+TGG | 0.555129 | 2.1:+52801701 | MS.gene037039:CDS |
| GACTCATATCTGTTGTAGCA+TGG | 0.556631 | 2.1:+52801792 | MS.gene037039:CDS |
| TGAGACTCATCATGTTTCCA+AGG | 0.561100 | 2.1:+52801874 | MS.gene037039:CDS |
| TACTGTCTCAAAGCAAAGAA+GGG | 0.565971 | 2.1:+52804256 | MS.gene037039:CDS |
| CAAATAAGAGCCGATTCAGT+TGG | 0.568756 | 2.1:-52804096 | None:intergenic |
| TTACTAAGCAAGTGTAACAC+TGG | 0.573676 | 2.1:+52801752 | MS.gene037039:CDS |
| GTAATAGAAGATTAATAAAG+GGG | 0.575521 | 2.1:+52803154 | MS.gene037039:CDS |
| AAGAAGTGATTCAGATTCAG+AGG | 0.580601 | 2.1:+52799981 | MS.gene037039:CDS |
| CCTTCATGCAACTGATGAGA+CGG | 0.583538 | 2.1:+52802571 | MS.gene037039:CDS |
| GCTTAGTAAGTCTGAAGATG+TGG | 0.584145 | 2.1:-52801738 | None:intergenic |
| CTGTTTACCTATTCAAAAGT+GGG | 0.584359 | 2.1:+52804287 | MS.gene037039:CDS |
| TCCTACTGTCAAGGATGCAG+AGG | 0.585602 | 2.1:+52803447 | MS.gene037039:CDS |
| AGCCATCTTGAGCAAAGACT+GGG | 0.590587 | 2.1:+52804134 | MS.gene037039:CDS |
| AAACTGAAGGATACAAGTAA+TGG | 0.596730 | 2.1:+52803373 | MS.gene037039:CDS |
| AGAGTCCAAAGGAGAAACTT+GGG | 0.596821 | 2.1:+52804218 | MS.gene037039:CDS |
| ATACAGTACTGTAAAACTGA+AGG | 0.600781 | 2.1:+52803360 | MS.gene037039:intron |
| TACAAGGTTACAATAGGAGA+GGG | 0.603103 | 2.1:-52804315 | None:intergenic |
| AAACGTGTGAGATCAGATCC+TGG | 0.604506 | 2.1:-52800063 | None:intergenic |
| GCTCCAAGCTCCTACTGTCA+AGG | 0.607943 | 2.1:+52803438 | MS.gene037039:CDS |
| AAGGTTACAATAGGAGAGGG+TGG | 0.609878 | 2.1:-52804312 | None:intergenic |
| TCAAGAGAAAGAGAGTCCAA+AGG | 0.612442 | 2.1:+52804207 | MS.gene037039:CDS |
| TCAGTGGAAGCTCAGGTGCA+CGG | 0.614792 | 2.1:+52802949 | MS.gene037039:CDS |
| ACCTCTGCATCCTTGACAGT+AGG | 0.617499 | 2.1:-52803448 | None:intergenic |
| TTTGGAAAGTTGAATAATGG+TGG | 0.620708 | 2.1:-52801680 | None:intergenic |
| GTTTGCTTCATCAGTGCGTG+TGG | 0.630703 | 2.1:+52804073 | MS.gene037039:intron |
| AGGTTACAATAGGAGAGGGT+GGG | 0.632365 | 2.1:-52804311 | None:intergenic |
| TACTAAGCAAGTGTAACACT+GGG | 0.639181 | 2.1:+52801753 | MS.gene037039:CDS |
| TTACAAGGTTACAATAGGAG+AGG | 0.643460 | 2.1:-52804316 | None:intergenic |
| GAGACTCATCATGTTTCCAA+GGG | 0.644355 | 2.1:+52801875 | MS.gene037039:CDS |
| TGCACGGAAAACGGAAACTG+AGG | 0.670770 | 2.1:+52802965 | MS.gene037039:CDS |
| CATGAAGGGCAGATACAGCA+GGG | 0.681197 | 2.1:-52802556 | None:intergenic |
| AAGAGAAGCAAAGAAAACTG+TGG | 0.683712 | 2.1:+52804164 | MS.gene037039:CDS |
| GAAGGGCAGATACAGCAGGG+TGG | 0.789321 | 2.1:-52802553 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATTTTTTATTTTTT+TGG | + | chr2.1:52800594-52800613 | MS.gene037039:intron | 0.0% |
| !! | ATAGATAAAAAAAAAATTGA+GGG | + | chr2.1:52801376-52801395 | MS.gene037039:intron | 10.0% |
| !! | ATCATATTATAGTATTAATT+AGG | - | chr2.1:52803342-52803361 | None:intergenic | 10.0% |
| !! | TATAGATAAAAAAAAAATTG+AGG | + | chr2.1:52801375-52801394 | MS.gene037039:intron | 10.0% |
| !!! | AATTTTACAGTTTTTTTTAT+TGG | + | chr2.1:52800183-52800202 | MS.gene037039:intron | 10.0% |
| !!! | TAATTTTTCTTTCATTTTAA+TGG | + | chr2.1:52801079-52801098 | MS.gene037039:intron | 10.0% |
| !! | ATAAAATAAACCAAATATGT+AGG | + | chr2.1:52802798-52802817 | MS.gene037039:intron | 15.0% |
| !! | ATTATCATATGAAGAAAATA+TGG | + | chr2.1:52800313-52800332 | MS.gene037039:intron | 15.0% |
| !! | TAATTAGGAACATATTATAT+AGG | - | chr2.1:52803327-52803346 | None:intergenic | 15.0% |
| !!! | AAAAAATTTAATTGCACTTT+TGG | - | chr2.1:52800685-52800704 | None:intergenic | 15.0% |
| !!! | ATAAGATATTTTTTAGTTGT+TGG | - | chr2.1:52800836-52800855 | None:intergenic | 15.0% |
| !!! | ATTTTTTGTTCAAAAAACTA+GGG | + | chr2.1:52800627-52800646 | MS.gene037039:intron | 15.0% |
| !!! | CAATTAAATTTTTTGTTTGA+AGG | + | chr2.1:52800691-52800710 | MS.gene037039:intron | 15.0% |
| !!! | TATTTTTTGTTCAAAAAACT+AGG | + | chr2.1:52800626-52800645 | MS.gene037039:intron | 15.0% |
| !!! | TGATTTTTTGTTGTATAAAT+TGG | - | chr2.1:52801028-52801047 | None:intergenic | 15.0% |
| !!! | TTTTTTATTTTTTTGGTCAA+CGG | + | chr2.1:52800601-52800620 | MS.gene037039:intron | 15.0% |
| !!! | TTTTTTTTTTTTGAAAGAAG+TGG | + | chr2.1:52800355-52800374 | MS.gene037039:intron | 15.0% |
| !! | AAAAGTAAAAGCTTATAAAG+TGG | - | chr2.1:52800496-52800515 | None:intergenic | 20.0% |
| !! | AAAGTGAACAAAAAAATGTA+CGG | - | chr2.1:52800870-52800889 | None:intergenic | 20.0% |
| !! | AGAATTCTTATAAAGAGATT+TGG | - | chr2.1:52803027-52803046 | None:intergenic | 20.0% |
| !! | ATAAAAACAAGCATATCTTT+CGG | - | chr2.1:52802192-52802211 | None:intergenic | 20.0% |
| !! | ATACTGACAATGTAAATTTA+CGG | + | chr2.1:52802358-52802377 | MS.gene037039:intron | 20.0% |
| !! | ATGTTAAATTATAGACCAAT+CGG | + | chr2.1:52802239-52802258 | MS.gene037039:intron | 20.0% |
| !! | CTAAATATTTATACTTCGAT+TGG | - | chr2.1:52803609-52803628 | None:intergenic | 20.0% |
| !! | GATTTGACTATAAAAAAAAC+AGG | - | chr2.1:52802274-52802293 | None:intergenic | 20.0% |
| !! | GGTAATAGAAGATTAATAAA+GGG | + | chr2.1:52803153-52803172 | MS.gene037039:CDS | 20.0% |
| !! | GTAATAGAAGATTAATAAAG+GGG | + | chr2.1:52803154-52803173 | MS.gene037039:CDS | 20.0% |
| !! | TAAATTGGATATTACAACTT+TGG | - | chr2.1:52801013-52801032 | None:intergenic | 20.0% |
| !! | TACAAGAATTCAATCATTTA+TGG | - | chr2.1:52802510-52802529 | None:intergenic | 20.0% |
| !! | TATCTAACAATGTTTCAATA+AGG | + | chr2.1:52800931-52800950 | MS.gene037039:intron | 20.0% |
| !! | TGGTAATAGAAGATTAATAA+AGG | + | chr2.1:52803152-52803171 | MS.gene037039:CDS | 20.0% |
| !!! | AAATTAAAACTTTGGCTTTA+CGG | - | chr2.1:52800796-52800815 | None:intergenic | 20.0% |
| !!! | AATTTCTTTTGTTTTTCCAT+AGG | - | chr2.1:52802077-52802096 | None:intergenic | 20.0% |
| !!! | AGAGATTTTGTCAAAAATAA+CGG | - | chr2.1:52800291-52800310 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTATTGGATTTAG+AGG | + | chr2.1:52800192-52800211 | MS.gene037039:intron | 20.0% |
| !!! | TACTTTTTTTCTTCTTTGTT+TGG | + | chr2.1:52800111-52800130 | MS.gene037039:intron | 20.0% |
| !!! | TTAGTTTTAAAAAGAATGAG+TGG | - | chr2.1:52800896-52800915 | None:intergenic | 20.0% |
| !!! | TTCTTCATTTCTTATGTTTT+GGG | + | chr2.1:52800142-52800161 | MS.gene037039:intron | 20.0% |
| !!! | TTTAAAATAACTGCATGAAA+GGG | - | chr2.1:52801149-52801168 | None:intergenic | 20.0% |
| !!! | TTTCTTCATTTCTTATGTTT+TGG | + | chr2.1:52800141-52800160 | MS.gene037039:intron | 20.0% |
| !!! | TTTTTATTTTTTTGGTCAAC+GGG | + | chr2.1:52800602-52800621 | MS.gene037039:intron | 20.0% |
| !!! | TTTTTCTTTCATTTTAATGG+TGG | + | chr2.1:52801082-52801101 | MS.gene037039:intron | 20.0% |
| ! | AAAGTTCTCTTTACAGTTAA+TGG | + | chr2.1:52803201-52803220 | MS.gene037039:CDS | 25.0% |
| ! | AATACTCAACATATGGTTAA+AGG | - | chr2.1:52800395-52800414 | None:intergenic | 25.0% |
| ! | AATATACGTTGCAATAGATT+AGG | - | chr2.1:52800021-52800040 | None:intergenic | 25.0% |
| ! | ACGAGAAAACAAAATTAAGT+TGG | - | chr2.1:52800972-52800991 | None:intergenic | 25.0% |
| ! | AGTACAAACATGCATAAATA+TGG | + | chr2.1:52801176-52801195 | MS.gene037039:intron | 25.0% |
| ! | ATACTCAACATATGGTTAAA+GGG | - | chr2.1:52800394-52800413 | None:intergenic | 25.0% |
| ! | ATACTTGTTCTAACTCAATT+GGG | - | chr2.1:52802717-52802736 | None:intergenic | 25.0% |
| ! | ATTATATATACCAAAGTTGC+CGG | + | chr2.1:52802094-52802113 | MS.gene037039:intron | 25.0% |
| ! | CAATGAATAATCTGTTAAGT+TGG | + | chr2.1:52802420-52802439 | MS.gene037039:intron | 25.0% |
| ! | GTCAAATCCATCTTAAAATA+TGG | + | chr2.1:52802286-52802305 | MS.gene037039:intron | 25.0% |
| ! | GTTTAAACATTGACATTACA+AGG | + | chr2.1:52803808-52803827 | MS.gene037039:intron | 25.0% |
| ! | TAAGTCTTCTTAAAAATGTG+CGG | + | chr2.1:52800040-52800059 | MS.gene037039:CDS | 25.0% |
| ! | TACATAAGTCAATCATTCTT+CGG | + | chr2.1:52803123-52803142 | MS.gene037039:CDS | 25.0% |
| ! | TATAAAAAAAACAGGTAAGC+CGG | - | chr2.1:52802266-52802285 | None:intergenic | 25.0% |
| ! | TGTCTATCCAAAAAAAATGT+AGG | + | chr2.1:52802922-52802941 | MS.gene037039:intron | 25.0% |
| ! | TGTTAAGAATAACAAATCAG+TGG | - | chr2.1:52803289-52803308 | None:intergenic | 25.0% |
| ! | TTAAAATAACTGCATGAAAG+GGG | - | chr2.1:52801148-52801167 | None:intergenic | 25.0% |
| !! | GTTTAAAATAACTGCATGAA+AGG | - | chr2.1:52801150-52801169 | None:intergenic | 25.0% |
| !!! | AACTTAATTTTGTTTTCTCG+TGG | + | chr2.1:52800971-52800990 | MS.gene037039:intron | 25.0% |
| !!! | ATATGTTGAGTATTGAATCT+GGG | + | chr2.1:52800401-52800420 | MS.gene037039:intron | 25.0% |
| !!! | ATATGTTTAGTTTGGTGTTA+CGG | + | chr2.1:52800429-52800448 | MS.gene037039:intron | 25.0% |
| !!! | GATTGGTCTATAATTTAACA+TGG | - | chr2.1:52802240-52802259 | None:intergenic | 25.0% |
| !!! | TGAAGTACCTACATTTTTTT+TGG | - | chr2.1:52802932-52802951 | None:intergenic | 25.0% |
| !!! | TTTTGGGATGAGTAAAAATA+GGG | + | chr2.1:52800158-52800177 | MS.gene037039:intron | 25.0% |
| !!! | TTTTTTGGATAGACAAATGA+TGG | - | chr2.1:52802917-52802936 | None:intergenic | 25.0% |
| AAAAAATGTAGGTACTTCAG+TGG | + | chr2.1:52802933-52802952 | MS.gene037039:intron | 30.0% | |
| AAACTGAAGGATACAAGTAA+TGG | + | chr2.1:52803373-52803392 | MS.gene037039:CDS | 30.0% | |
| ACTATGATTCAAACCAAAGT+TGG | - | chr2.1:52802018-52802037 | None:intergenic | 30.0% | |
| ACTCGATTAGAATGTTAAGT+TGG | - | chr2.1:52802156-52802175 | None:intergenic | 30.0% | |
| ACTGTTTACCTATTCAAAAG+TGG | + | chr2.1:52804286-52804305 | MS.gene037039:CDS | 30.0% | |
| ATAAGAATTCTTCCTGTTAC+TGG | + | chr2.1:52803036-52803055 | MS.gene037039:CDS | 30.0% | |
| ATACAAGTAATGGTGAAGAA+AGG | + | chr2.1:52803383-52803402 | MS.gene037039:CDS | 30.0% | |
| ATACAGTACTGTAAAACTGA+AGG | + | chr2.1:52803360-52803379 | MS.gene037039:intron | 30.0% | |
| ATGCTAAAGAAGTCATTTCA+AGG | + | chr2.1:52803416-52803435 | MS.gene037039:CDS | 30.0% | |
| ATTGGATTTAGAGGTGAAAT+AGG | + | chr2.1:52800201-52800220 | MS.gene037039:intron | 30.0% | |
| CAGATTCAATACTCAACATA+TGG | - | chr2.1:52800402-52800421 | None:intergenic | 30.0% | |
| CATACTTGTTCTAACTCAAT+TGG | - | chr2.1:52802718-52802737 | None:intergenic | 30.0% | |
| CATTGTCAGTATTACATTAG+AGG | - | chr2.1:52802350-52802369 | None:intergenic | 30.0% | |
| CGGAAAACATAGAAATCATA+TGG | + | chr2.1:52802591-52802610 | MS.gene037039:CDS | 30.0% | |
| CTCGATTAGAATGTTAAGTT+GGG | - | chr2.1:52802155-52802174 | None:intergenic | 30.0% | |
| CTGTTTACCTATTCAAAAGT+GGG | + | chr2.1:52804287-52804306 | MS.gene037039:CDS | 30.0% | |
| GAAAATTCATGTTAATGTCG+AGG | + | chr2.1:52800468-52800487 | MS.gene037039:intron | 30.0% | |
| GAATCACTTCTTAACGAAAA+TGG | - | chr2.1:52799973-52799992 | None:intergenic | 30.0% | |
| GCATCACATTACAATGTTAT+TGG | - | chr2.1:52801302-52801321 | None:intergenic | 30.0% | |
| GGGGATTATGAAATTATGAA+GGG | + | chr2.1:52800569-52800588 | MS.gene037039:intron | 30.0% | |
| TAAACATTGACATTACAAGG+AGG | + | chr2.1:52803811-52803830 | MS.gene037039:intron | 30.0% | |
| TACAAGTAATGGTGAAGAAA+GGG | + | chr2.1:52803384-52803403 | MS.gene037039:CDS | 30.0% | |
| TACATGCTTTATGCTTAGTT+TGG | + | chr2.1:52801946-52801965 | MS.gene037039:intron | 30.0% | |
| TCACCAAGAATTGGATTATA+AGG | - | chr2.1:52801857-52801876 | None:intergenic | 30.0% | |
| TCTTGTATTTGATTGTTTGC+AGG | + | chr2.1:52802523-52802542 | MS.gene037039:intron | 30.0% | |
| TGAGACAGTATGAAATGTTT+AGG | - | chr2.1:52804246-52804265 | None:intergenic | 30.0% | |
| TGTCTGATTATAGAAACCTA+TGG | + | chr2.1:52802058-52802077 | MS.gene037039:intron | 30.0% | |
| TTGACGTTCAATTAAAGTTG+TGG | + | chr2.1:52802771-52802790 | MS.gene037039:intron | 30.0% | |
| TTTGGAAAGTTGAATAATGG+TGG | - | chr2.1:52801683-52801702 | None:intergenic | 30.0% | |
| ! | GACTTTGGAAAGTTGAATAA+TGG | - | chr2.1:52801686-52801705 | None:intergenic | 30.0% |
| ! | GGGTTAGTATATGTTTAGTT+TGG | + | chr2.1:52800421-52800440 | MS.gene037039:intron | 30.0% |
| ! | TATTCATGCCTCAATTTTCA+TGG | - | chr2.1:52803671-52803690 | None:intergenic | 30.0% |
| ! | TTTGGGATGAGTAAAAATAG+GGG | + | chr2.1:52800159-52800178 | MS.gene037039:intron | 30.0% |
| ! | TTTTCACCCAAGAAATTATG+AGG | + | chr2.1:52800261-52800280 | MS.gene037039:intron | 30.0% |
| !! | ATTACATTAGAGGTGTCAAA+TGG | - | chr2.1:52802340-52802359 | None:intergenic | 30.0% |
| !! | ATTAGAATGTTAAGTTGGGT+TGG | - | chr2.1:52802151-52802170 | None:intergenic | 30.0% |
| !! | CATATGTTGAGTATTGAATC+TGG | + | chr2.1:52800400-52800419 | MS.gene037039:intron | 30.0% |
| !! | CTTTGGTTTGAATCATAGTT+AGG | + | chr2.1:52802019-52802038 | MS.gene037039:intron | 30.0% |
| !! | GACTAGTCCATATTTTAAGA+TGG | - | chr2.1:52802296-52802315 | None:intergenic | 30.0% |
| !! | TCTGTTAAGTTGGTGAAATA+TGG | + | chr2.1:52802430-52802449 | MS.gene037039:intron | 30.0% |
| !! | TTAAGTTGGTGAAATATGGT+TGG | + | chr2.1:52802434-52802453 | MS.gene037039:intron | 30.0% |
| !! | TTAGAGAATGAAAAGTGTTC+CGG | + | chr2.1:52803625-52803644 | MS.gene037039:intron | 30.0% |
| !! | TTTCATTTTAATGGTGGAGT+AGG | + | chr2.1:52801088-52801107 | MS.gene037039:intron | 30.0% |
| !!! | AAAAGTTTTAAGGAGGTCTA+GGG | + | chr2.1:52802870-52802889 | MS.gene037039:intron | 30.0% |
| !!! | AACGCAATGTTATTTTCGTA+TGG | - | chr2.1:52801639-52801658 | None:intergenic | 30.0% |
| !!! | GTTTTGGGATGAGTAAAAAT+AGG | + | chr2.1:52800157-52800176 | MS.gene037039:intron | 30.0% |
| !!! | TATAGTACTTTTTTGTGTGC+CGG | - | chr2.1:52803902-52803921 | None:intergenic | 30.0% |
| AAAAAATACTACCAGCCACT+TGG | - | chr2.1:52800340-52800359 | None:intergenic | 35.0% | |
| AAACATGTACCTGTTCTAGT+AGG | - | chr2.1:52801913-52801932 | None:intergenic | 35.0% | |
| AAACTGTGGAGCAAAAACAA+AGG | + | chr2.1:52804178-52804197 | MS.gene037039:CDS | 35.0% | |
| AAATTATAGACCAATCGGAC+CGG | + | chr2.1:52802244-52802263 | MS.gene037039:intron | 35.0% | |
| AACATCAGGTGTATAGAAAC+AGG | + | chr2.1:52803081-52803100 | MS.gene037039:CDS | 35.0% | |
| AACTGTGGAGCAAAAACAAA+GGG | + | chr2.1:52804179-52804198 | MS.gene037039:CDS | 35.0% | |
| AAGAAGTGATTCAGATTCAG+AGG | + | chr2.1:52799981-52800000 | MS.gene037039:CDS | 35.0% | |
| AAGAGAAGCAAAGAAAACTG+TGG | + | chr2.1:52804164-52804183 | MS.gene037039:CDS | 35.0% | |
| AAGTCACAACTTCAATGCTA+TGG | + | chr2.1:52801701-52801720 | MS.gene037039:CDS | 35.0% | |
| AATCAAGTAAAGCGGTACAT+CGG | + | chr2.1:52803931-52803950 | MS.gene037039:intron | 35.0% | |
| AGTCAATCATTCTTCGGATT+TGG | + | chr2.1:52803129-52803148 | MS.gene037039:CDS | 35.0% | |
| ATACTGTCTCAAAGCAAAGA+AGG | + | chr2.1:52804255-52804274 | MS.gene037039:CDS | 35.0% | |
| ATGCGCAATATGTGTGTATA+TGG | + | chr2.1:52803479-52803498 | MS.gene037039:intron | 35.0% | |
| CGAAAATAACATTGCGTTGT+TGG | + | chr2.1:52801641-52801660 | MS.gene037039:intron | 35.0% | |
| CGGGGATTATGAAATTATGA+AGG | + | chr2.1:52800568-52800587 | MS.gene037039:intron | 35.0% | |
| CTTTACAGTTAATGGTCACT+GGG | + | chr2.1:52803209-52803228 | MS.gene037039:CDS | 35.0% | |
| GACTGTAGTACCTACATATT+TGG | - | chr2.1:52802811-52802830 | None:intergenic | 35.0% | |
| GCTCCTTATAATCCAATTCT+TGG | + | chr2.1:52801851-52801870 | MS.gene037039:CDS | 35.0% | |
| GGTTGTCCTCATAATTTCTT+GGG | - | chr2.1:52800270-52800289 | None:intergenic | 35.0% | |
| TAAGGAGCAACACCAAAAAT+TGG | - | chr2.1:52801839-52801858 | None:intergenic | 35.0% | |
| TACAAGGTTACAATAGGAGA+GGG | - | chr2.1:52804318-52804337 | None:intergenic | 35.0% | |
| TACTAAGCAAGTGTAACACT+GGG | + | chr2.1:52801753-52801772 | MS.gene037039:CDS | 35.0% | |
| TACTGTCTCAAAGCAAAGAA+GGG | + | chr2.1:52804256-52804275 | MS.gene037039:CDS | 35.0% | |
| TAGGACATTAAGATTTCCCT+TGG | - | chr2.1:52801894-52801913 | None:intergenic | 35.0% | |
| TCTAGAGAACACGTATAAGT+TGG | + | chr2.1:52803545-52803564 | MS.gene037039:intron | 35.0% | |
| TCTTAATGTCCTACTAGAAC+AGG | + | chr2.1:52801901-52801920 | MS.gene037039:CDS | 35.0% | |
| TCTTTACAGTTAATGGTCAC+TGG | + | chr2.1:52803208-52803227 | MS.gene037039:CDS | 35.0% | |
| TGAAGAAAATATGGTCCAAG+TGG | + | chr2.1:52800322-52800341 | MS.gene037039:intron | 35.0% | |
| TGCGCAATATGTGTGTATAT+GGG | + | chr2.1:52803480-52803499 | MS.gene037039:intron | 35.0% | |
| TGGTGAAAAGAAAAAACGAG+CGG | + | chr2.1:52800548-52800567 | MS.gene037039:intron | 35.0% | |
| TGTGAATGTGTTTATCTCTC+TGG | + | chr2.1:52804028-52804047 | MS.gene037039:intron | 35.0% | |
| TTACAAGGTTACAATAGGAG+AGG | - | chr2.1:52804319-52804338 | None:intergenic | 35.0% | |
| TTACTAAGCAAGTGTAACAC+TGG | + | chr2.1:52801752-52801771 | MS.gene037039:CDS | 35.0% | |
| ! | AGACCTCCTTAAAACTTTTC+CGG | - | chr2.1:52802869-52802888 | None:intergenic | 35.0% |
| ! | CAGACAATACCTCTGAAAAT+TGG | + | chr2.1:52803770-52803789 | MS.gene037039:intron | 35.0% |
| ! | GTATATGTATCGATGTTGTG+CGG | + | chr2.1:52801511-52801530 | MS.gene037039:intron | 35.0% |
| ! | TAGCATTGAAGTTGTGACTT+TGG | - | chr2.1:52801701-52801720 | None:intergenic | 35.0% |
| !! | AAAATATGGACTAGTCGAAC+CGG | + | chr2.1:52802300-52802319 | MS.gene037039:intron | 35.0% |
| !! | ACCTCTGAAAATTGGTGTTA+CGG | + | chr2.1:52803778-52803797 | MS.gene037039:intron | 35.0% |
| !!! | CGATTTTTTCCTCAGTTTGA+AGG | - | chr2.1:52803729-52803748 | None:intergenic | 35.0% |
| !!! | GAAAAGTTTTAAGGAGGTCT+AGG | + | chr2.1:52802869-52802888 | MS.gene037039:intron | 35.0% |
| ACACACATATTGCGCATTAG+TGG | - | chr2.1:52803476-52803495 | None:intergenic | 40.0% | |
| ACTTGAACATGCCTCATATG+AGG | + | chr2.1:52801559-52801578 | MS.gene037039:intron | 40.0% | |
| AGAGTCCAAAGGAGAAACTT+GGG | + | chr2.1:52804218-52804237 | MS.gene037039:CDS | 40.0% | |
| ATATACCAAAGTTGCCGGAT+TGG | + | chr2.1:52802099-52802118 | MS.gene037039:intron | 40.0% | |
| CAATCATTCTTCGGATTTGG+TGG | + | chr2.1:52803132-52803151 | MS.gene037039:CDS | 40.0% | |
| CACTCACTCTATTTATCCCA+CGG | + | chr2.1:52803698-52803717 | MS.gene037039:intron | 40.0% | |
| CATATGTCTCTCCATGATTG+AGG | - | chr2.1:52802993-52803012 | None:intergenic | 40.0% | |
| CGGTTGTCCTCATAATTTCT+TGG | - | chr2.1:52800271-52800290 | None:intergenic | 40.0% | |
| CTGGCATTCCATGAAAATTG+AGG | + | chr2.1:52803660-52803679 | MS.gene037039:intron | 40.0% | |
| GACTCATATCTGTTGTAGCA+TGG | + | chr2.1:52801792-52801811 | MS.gene037039:CDS | 40.0% | |
| GAGACTCATCATGTTTCCAA+GGG | + | chr2.1:52801875-52801894 | MS.gene037039:CDS | 40.0% | |
| GAGCAACACCAAAAATTGGA+GGG | - | chr2.1:52801835-52801854 | None:intergenic | 40.0% | |
| GCTTAGTAAGTCTGAAGATG+TGG | - | chr2.1:52801741-52801760 | None:intergenic | 40.0% | |
| GGTGAAAAGAAAAAACGAGC+GGG | + | chr2.1:52800549-52800568 | MS.gene037039:intron | 40.0% | |
| GTGAAAAGAAAAAACGAGCG+GGG | + | chr2.1:52800550-52800569 | MS.gene037039:intron | 40.0% | |
| TATCCTGCTGCAAAGTTCAA+TGG | + | chr2.1:52802620-52802639 | MS.gene037039:CDS | 40.0% | |
| TCAAAGCAAAGAAGGGTCTT+GGG | + | chr2.1:52804263-52804282 | MS.gene037039:CDS | 40.0% | |
| TCAAGAGAAAGAGAGTCCAA+AGG | + | chr2.1:52804207-52804226 | MS.gene037039:CDS | 40.0% | |
| TGAGACTCATCATGTTTCCA+AGG | + | chr2.1:52801874-52801893 | MS.gene037039:CDS | 40.0% | |
| TGATGAGTCTCACCAAGAAT+TGG | - | chr2.1:52801866-52801885 | None:intergenic | 40.0% | |
| TGCATGAAAGGGGAAAACTT+TGG | - | chr2.1:52801138-52801157 | None:intergenic | 40.0% | |
| TGTTACGGTCTGTAAAATCG+CGG | + | chr2.1:52800444-52800463 | MS.gene037039:intron | 40.0% | |
| TTACCATTGAACTTTGCAGC+AGG | - | chr2.1:52802626-52802645 | None:intergenic | 40.0% | |
| TTCAAGTGTCAGACACGTAT+CGG | - | chr2.1:52801546-52801565 | None:intergenic | 40.0% | |
| ! | ATCTGATCTCACACGTTTTC+AGG | + | chr2.1:52800068-52800087 | MS.gene037039:CDS | 40.0% |
| ! | CAAATAAGAGCCGATTCAGT+TGG | - | chr2.1:52804099-52804118 | None:intergenic | 40.0% |
| ! | CAACTGAATCGGCTCTTATT+TGG | + | chr2.1:52804097-52804116 | MS.gene037039:CDS | 40.0% |
| ! | GGAACACCGGAAAAGTTTTA+AGG | + | chr2.1:52802860-52802879 | MS.gene037039:intron | 40.0% |
| ! | TCCGTAACACCAATTTTCAG+AGG | - | chr2.1:52803782-52803801 | None:intergenic | 40.0% |
| ! | TCCTGTTACTGGAGTTGATT+GGG | + | chr2.1:52803047-52803066 | MS.gene037039:CDS | 40.0% |
| ! | TTACTGGAGTTGATTGGGTT+GGG | + | chr2.1:52803052-52803071 | MS.gene037039:CDS | 40.0% |
| ! | TTCATGGAATGCCAGACTTT+TGG | - | chr2.1:52803655-52803674 | None:intergenic | 40.0% |
| ! | TTCCTGTTACTGGAGTTGAT+TGG | + | chr2.1:52803046-52803065 | MS.gene037039:CDS | 40.0% |
| !! | AAGAGATTGATTCGACTGCT+GGG | + | chr2.1:52801605-52801624 | MS.gene037039:intron | 40.0% |
| !! | CAGAGGTATTGTCTGATTTC+AGG | - | chr2.1:52803765-52803784 | None:intergenic | 40.0% |
| !! | GGATATTACAACTTTGGAGC+CGG | - | chr2.1:52801007-52801026 | None:intergenic | 40.0% |
| !!! | ACACCGGAAAAGTTTTAAGG+AGG | + | chr2.1:52802863-52802882 | MS.gene037039:intron | 40.0% |
| AAACGTGTGAGATCAGATCC+TGG | - | chr2.1:52800066-52800085 | None:intergenic | 45.0% | |
| AAACTGAGGCTCCTCAATCA+TGG | + | chr2.1:52802979-52802998 | MS.gene037039:CDS | 45.0% | |
| AAGCCATCTTGAGCAAAGAC+TGG | + | chr2.1:52804133-52804152 | MS.gene037039:CDS | 45.0% | |
| AAGGTTACAATAGGAGAGGG+TGG | - | chr2.1:52804315-52804334 | None:intergenic | 45.0% | |
| AATTCAGGGTAAGGGGCTAA+AGG | - | chr2.1:52803865-52803884 | None:intergenic | 45.0% | |
| ACCCAATCAACTCCAGTAAC+AGG | - | chr2.1:52803051-52803070 | None:intergenic | 45.0% | |
| AGCCATCTTGAGCAAAGACT+GGG | + | chr2.1:52804134-52804153 | MS.gene037039:CDS | 45.0% | |
| AGGAACCCAAGTTTCTCCTT+TGG | - | chr2.1:52804226-52804245 | None:intergenic | 45.0% | |
| AGGTTACAATAGGAGAGGGT+GGG | - | chr2.1:52804314-52804333 | None:intergenic | 45.0% | |
| AGTCTTTGCTCAAGATGGCT+TGG | - | chr2.1:52804134-52804153 | None:intergenic | 45.0% | |
| ATTCAGGGTAAGGGGCTAAA+GGG | - | chr2.1:52803864-52803883 | None:intergenic | 45.0% | |
| CAAGATACTGTGCAATCGTG+CGG | + | chr2.1:52800522-52800541 | MS.gene037039:intron | 45.0% | |
| CAAGCTACGAAGCACGAATA+CGG | + | chr2.1:52801428-52801447 | MS.gene037039:intron | 45.0% | |
| CAGTTAATGGTCACTGGGAT+AGG | + | chr2.1:52803214-52803233 | MS.gene037039:CDS | 45.0% | |
| CCTTCATGCAACTGATGAGA+CGG | + | chr2.1:52802571-52802590 | MS.gene037039:CDS | 45.0% | |
| CGTCTCATCAGTTGCATGAA+GGG | - | chr2.1:52802573-52802592 | None:intergenic | 45.0% | |
| CTCAAAGCAAAGAAGGGTCT+TGG | + | chr2.1:52804262-52804281 | MS.gene037039:CDS | 45.0% | |
| CTTCTTAAAAATGTGCGGCC+AGG | + | chr2.1:52800045-52800064 | MS.gene037039:CDS | 45.0% | |
| GAAAATATGGTCCAAGTGGC+TGG | + | chr2.1:52800326-52800345 | MS.gene037039:intron | 45.0% | |
| GAGAGTCCAAAGGAGAAACT+TGG | + | chr2.1:52804217-52804236 | MS.gene037039:CDS | 45.0% | |
| GCACATACACTCCTCATATG+AGG | - | chr2.1:52801573-52801592 | None:intergenic | 45.0% | |
| GGAGCAACACCAAAAATTGG+AGG | - | chr2.1:52801836-52801855 | None:intergenic | 45.0% | |
| GTGACAAGACTCTCTCAACT+TGG | + | chr2.1:52801992-52802011 | MS.gene037039:intron | 45.0% | |
| TCTAATCGATACGCACGTGT+CGG | - | chr2.1:52801470-52801489 | None:intergenic | 45.0% | |
| TCTCTCAACTTGGCCAACTT+TGG | + | chr2.1:52802002-52802021 | MS.gene037039:intron | 45.0% | |
| TGTGGAGCAAAAACAAAGGG+AGG | + | chr2.1:52804182-52804201 | MS.gene037039:CDS | 45.0% | |
| TTAGCCCCTTACCCTGAATT+GGG | + | chr2.1:52803865-52803884 | MS.gene037039:intron | 45.0% | |
| TTCCCAGTCTTTGCTCAAGA+TGG | - | chr2.1:52804139-52804158 | None:intergenic | 45.0% | |
| TTTAGCCCCTTACCCTGAAT+TGG | + | chr2.1:52803864-52803883 | MS.gene037039:intron | 45.0% | |
| ! | ACATTGCGTTGTTGGTTGCT+TGG | + | chr2.1:52801649-52801668 | MS.gene037039:intron | 45.0% |
| ! | GTTACTGGAGTTGATTGGGT+TGG | + | chr2.1:52803051-52803070 | MS.gene037039:CDS | 45.0% |
| ! | GTTGGCCTGACTGATTGAAT+GGG | + | chr2.1:52802121-52802140 | MS.gene037039:intron | 45.0% |
| !! | ATGCCAGACTTTTGGTGTAC+CGG | - | chr2.1:52803647-52803666 | None:intergenic | 45.0% |
| !! | CAAGAGATTGATTCGACTGC+TGG | + | chr2.1:52801604-52801623 | MS.gene037039:intron | 45.0% |
| !! | GAATGTTAAGTTGGGTTGGC+TGG | - | chr2.1:52802147-52802166 | None:intergenic | 45.0% |
| !! | ATAAAATAAAATTAAAACTT+TGG | - | chr2.1:52800804-52800823 | None:intergenic | 5.0% |
| AACAGCAGCCTCCCAATTCA+GGG | - | chr2.1:52803879-52803898 | None:intergenic | 50.0% | |
| AAGCTCAGGTGCACGGAAAA+CGG | + | chr2.1:52802956-52802975 | MS.gene037039:CDS | 50.0% | |
| AATGGCCTAGCCTAATGAGC+CGG | - | chr2.1:52802322-52802341 | None:intergenic | 50.0% | |
| ACAGTCCCCTCTAGGTAGTT+CGG | + | chr2.1:52802825-52802844 | MS.gene037039:intron | 50.0% | |
| ACCAACCGAACTACCTAGAG+GGG | - | chr2.1:52802833-52802852 | None:intergenic | 50.0% | |
| ACCTCTGCATCCTTGACAGT+AGG | - | chr2.1:52803451-52803470 | None:intergenic | 50.0% | |
| ACGAAGCACGAATACGGACA+TGG | + | chr2.1:52801434-52801453 | MS.gene037039:intron | 50.0% | |
| ACGGAGTAGCCTTCAAACTG+AGG | + | chr2.1:52803717-52803736 | MS.gene037039:intron | 50.0% | |
| AGCCTCCCAATTCAGGGTAA+GGG | - | chr2.1:52803873-52803892 | None:intergenic | 50.0% | |
| AGGTACTTCAGTGGAAGCTC+AGG | + | chr2.1:52802942-52802961 | MS.gene037039:intron | 50.0% | |
| ATCAGTCAGGCCAACCAATC+CGG | - | chr2.1:52802116-52802135 | None:intergenic | 50.0% | |
| CACCAACCGAACTACCTAGA+GGG | - | chr2.1:52802834-52802853 | None:intergenic | 50.0% | |
| CAGTTTGAAGGCTACTCCGT+GGG | - | chr2.1:52803717-52803736 | None:intergenic | 50.0% | |
| CATCCTTGACAGTAGGAGCT+TGG | - | chr2.1:52803444-52803463 | None:intergenic | 50.0% | |
| CATGAAGGGCAGATACAGCA+GGG | - | chr2.1:52802559-52802578 | None:intergenic | 50.0% | |
| CCGTCTCATCAGTTGCATGA+AGG | - | chr2.1:52802574-52802593 | None:intergenic | 50.0% | |
| CTAATCGATACGCACGTGTC+GGG | - | chr2.1:52801469-52801488 | None:intergenic | 50.0% | |
| GTTCCGGTACACCAAAAGTC+TGG | + | chr2.1:52803641-52803660 | MS.gene037039:intron | 50.0% | |
| GTTTGCTTCATCAGTGCGTG+TGG | + | chr2.1:52804073-52804092 | MS.gene037039:intron | 50.0% | |
| TAATCGATACGCACGTGTCG+GGG | - | chr2.1:52801468-52801487 | None:intergenic | 50.0% | |
| TAGGTACTACAGTCCCCTCT+AGG | + | chr2.1:52802817-52802836 | MS.gene037039:intron | 50.0% | |
| TCACCAACCGAACTACCTAG+AGG | - | chr2.1:52802835-52802854 | None:intergenic | 50.0% | |
| TCAGTTTGAAGGCTACTCCG+TGG | - | chr2.1:52803718-52803737 | None:intergenic | 50.0% | |
| TCCTACTGTCAAGGATGCAG+AGG | + | chr2.1:52803447-52803466 | MS.gene037039:CDS | 50.0% | |
| TGCACGGAAAACGGAAACTG+AGG | + | chr2.1:52802965-52802984 | MS.gene037039:CDS | 50.0% | |
| ! | ACCAAAAATTGGAGGGCGTG+TGG | - | chr2.1:52801828-52801847 | None:intergenic | 50.0% |
| ! | ACCACACGCCCTCCAATTTT+TGG | + | chr2.1:52801824-52801843 | MS.gene037039:CDS | 50.0% |
| ! | ACTAGTCGAACCGGCTCATT+AGG | + | chr2.1:52802309-52802328 | MS.gene037039:intron | 50.0% |
| ! | GTATCGATGTTGTGCGGTGT+CGG | + | chr2.1:52801517-52801536 | MS.gene037039:intron | 50.0% |
| ! | GTTGGTGAGCTAAGGAACAC+CGG | + | chr2.1:52802847-52802866 | MS.gene037039:intron | 50.0% |
| !! | ACCAAAGTTGCCGGATTGGT+TGG | + | chr2.1:52802103-52802122 | MS.gene037039:intron | 50.0% |
| !! | GGTGGGACCCACTTTTGAAT+AGG | - | chr2.1:52804297-52804316 | None:intergenic | 50.0% |
| !! | GGTTGGCCTGACTGATTGAA+TGG | + | chr2.1:52802120-52802139 | MS.gene037039:intron | 50.0% |
| !! | GTAGTTCGGTTGGTGAGCTA+AGG | + | chr2.1:52802839-52802858 | MS.gene037039:intron | 50.0% |
| AACAGGTAAGCCGGTCCGAT+TGG | - | chr2.1:52802257-52802276 | None:intergenic | 55.0% | |
| CAGCCTCCCAATTCAGGGTA+AGG | - | chr2.1:52803874-52803893 | None:intergenic | 55.0% | |
| GAACAGCAGCCTCCCAATTC+AGG | - | chr2.1:52803880-52803899 | None:intergenic | 55.0% | |
| GAATTGGGAGGCTGCTGTTC+CGG | + | chr2.1:52803880-52803899 | MS.gene037039:intron | 55.0% | |
| GATACTGTGCAATCGTGCGG+TGG | + | chr2.1:52800525-52800544 | MS.gene037039:intron | 55.0% | |
| GCATGAAGGGCAGATACAGC+AGG | - | chr2.1:52802560-52802579 | None:intergenic | 55.0% | |
| GCCAACCAATCCGGCAACTT+TGG | - | chr2.1:52802107-52802126 | None:intergenic | 55.0% | |
| GCCTCCCAATTCAGGGTAAG+GGG | - | chr2.1:52803872-52803891 | None:intergenic | 55.0% | |
| GCTCCAAGCTCCTACTGTCA+AGG | + | chr2.1:52803438-52803457 | MS.gene037039:CDS | 55.0% | |
| GCTGGCCCATTCAATCAGTC+AGG | - | chr2.1:52802129-52802148 | None:intergenic | 55.0% | |
| GTGCGTGTGGCCAACTGAAT+CGG | + | chr2.1:52804086-52804105 | MS.gene037039:intron | 55.0% | |
| TCAGTGGAAGCTCAGGTGCA+CGG | + | chr2.1:52802949-52802968 | MS.gene037039:CDS | 55.0% | |
| TCCCCTCTAGGTAGTTCGGT+TGG | + | chr2.1:52802829-52802848 | MS.gene037039:intron | 55.0% | |
| ! | TCGAACCGGCTCATTAGGCT+AGG | + | chr2.1:52802314-52802333 | MS.gene037039:intron | 55.0% |
| !! | GGGTTGGGAGTGTCAACATC+AGG | + | chr2.1:52803067-52803086 | MS.gene037039:CDS | 55.0% |
| !! | TACAACTTTGGAGCCGGTCG+AGG | - | chr2.1:52801001-52801020 | None:intergenic | 55.0% |
| ACTGTGCAATCGTGCGGTGG+TGG | + | chr2.1:52800528-52800547 | MS.gene037039:intron | 60.0% | |
| GAAGGGCAGATACAGCAGGG+TGG | - | chr2.1:52802556-52802575 | None:intergenic | 60.0% | |
| GCCCCTTACCCTGAATTGGG+AGG | + | chr2.1:52803868-52803887 | MS.gene037039:intron | 60.0% | |
| TTCTCGTGGTCCACCTCGAC+CGG | + | chr2.1:52800985-52801004 | MS.gene037039:intron | 60.0% | |
| !! | AACTTTGGAGCCGGTCGAGG+TGG | - | chr2.1:52800998-52801017 | None:intergenic | 60.0% |
| GAGGCCTAAGCCACGCACGA+GGG | + | chr2.1:52803830-52803849 | MS.gene037039:intron | 65.0% | |
| TCAGCCCTCGTGCGTGGCTT+AGG | - | chr2.1:52803837-52803856 | None:intergenic | 65.0% | |
| GGAGGCCTAAGCCACGCACG+AGG | + | chr2.1:52803829-52803848 | MS.gene037039:intron | 70.0% | |
| GGTCAGTCAGCCCTCGTGCG+TGG | - | chr2.1:52803843-52803862 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 52799928 | 52804338 | 52799928 | ID=MS.gene037039 |
| chr2.1 | mRNA | 52799928 | 52804338 | 52799928 | ID=MS.gene037039.t1;Parent=MS.gene037039 |
| chr2.1 | exon | 52799928 | 52800107 | 52799928 | ID=MS.gene037039.t1.exon1;Parent=MS.gene037039.t1 |
| chr2.1 | CDS | 52799928 | 52800107 | 52799928 | ID=cds.MS.gene037039.t1;Parent=MS.gene037039.t1 |
| chr2.1 | exon | 52801677 | 52801922 | 52801677 | ID=MS.gene037039.t1.exon2;Parent=MS.gene037039.t1 |
| chr2.1 | CDS | 52801677 | 52801922 | 52801677 | ID=cds.MS.gene037039.t1;Parent=MS.gene037039.t1 |
| chr2.1 | exon | 52802545 | 52802641 | 52802545 | ID=MS.gene037039.t1.exon3;Parent=MS.gene037039.t1 |
| chr2.1 | CDS | 52802545 | 52802641 | 52802545 | ID=cds.MS.gene037039.t1;Parent=MS.gene037039.t1 |
| chr2.1 | exon | 52802944 | 52803235 | 52802944 | ID=MS.gene037039.t1.exon4;Parent=MS.gene037039.t1 |
| chr2.1 | CDS | 52802944 | 52803235 | 52802944 | ID=cds.MS.gene037039.t1;Parent=MS.gene037039.t1 |
| chr2.1 | exon | 52803366 | 52803468 | 52803366 | ID=MS.gene037039.t1.exon5;Parent=MS.gene037039.t1 |
| chr2.1 | CDS | 52803366 | 52803468 | 52803366 | ID=cds.MS.gene037039.t1;Parent=MS.gene037039.t1 |
| chr2.1 | exon | 52804087 | 52804338 | 52804087 | ID=MS.gene037039.t1.exon6;Parent=MS.gene037039.t1 |
| chr2.1 | CDS | 52804087 | 52804338 | 52804087 | ID=cds.MS.gene037039.t1;Parent=MS.gene037039.t1 |
| Gene Sequence |
| Protein sequence |
