AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99026

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99026.t1 MTR_5g038220 97.409 386 10 0 1 386 1 386 0.0 766
MS.gene99026.t1 MTR_8g094410 31.445 353 216 11 18 360 36 372 1.12e-41 151
MS.gene99026.t1 MTR_8g094410 30.218 321 197 8 51 361 18 321 9.11e-39 143
MS.gene99026.t1 MTR_8g094410 32.389 247 153 6 13 252 136 375 1.42e-33 129
MS.gene99026.t1 MTR_8g094410 31.071 280 177 7 7 277 78 350 1.41e-28 115
MS.gene99026.t1 MTR_8g094410 31.837 245 134 9 152 384 14 237 1.69e-24 104
MS.gene99026.t1 MTR_8g094410 31.268 355 214 12 18 360 36 372 1.45e-41 152
MS.gene99026.t1 MTR_8g094410 30.218 321 197 8 51 361 18 321 8.59e-39 144
MS.gene99026.t1 MTR_8g094410 32.669 251 147 7 13 252 136 375 1.35e-33 130
MS.gene99026.t1 MTR_8g094410 31.071 280 177 7 7 277 78 350 1.96e-28 115
MS.gene99026.t1 MTR_8g094410 31.837 245 134 9 152 384 14 237 1.36e-24 105
MS.gene99026.t1 MTR_3g096780 30.435 345 210 10 51 385 20 344 1.57e-41 151
MS.gene99026.t1 MTR_3g096780 31.183 372 217 11 18 376 38 383 4.50e-40 147
MS.gene99026.t1 MTR_3g096780 35.484 279 161 9 9 277 83 352 3.13e-34 132
MS.gene99026.t1 MTR_3g096780 35.242 227 139 6 13 238 138 357 1.48e-32 127
MS.gene99026.t1 MTR_3g096780 32.794 247 131 9 151 384 15 239 1.15e-23 102
MS.gene99026.t1 MTR_5g089900 32.454 379 215 13 28 383 306 666 2.64e-38 147
MS.gene99026.t1 MTR_5g089900 30.675 163 109 2 15 177 516 674 7.09e-17 83.2
MS.gene99026.t1 MTR_8g094410 32.669 251 147 7 13 252 2 241 5.78e-35 131
MS.gene99026.t1 MTR_8g094410 28.685 251 152 9 120 360 5 238 1.27e-22 97.4
MS.gene99026.t1 MTR_8g094410 29.000 200 120 5 171 361 1 187 2.13e-18 85.5
MS.gene99026.t1 MTR_8g094410 41.250 80 43 1 305 384 28 103 4.37e-12 67.0
MS.gene99026.t1 MTR_8g094410 29.938 324 195 12 51 360 18 323 1.34e-33 129
MS.gene99026.t1 MTR_8g094410 32.653 245 143 7 19 252 93 326 1.20e-32 127
MS.gene99026.t1 MTR_8g094410 31.868 273 166 8 18 277 36 301 3.34e-27 111
MS.gene99026.t1 MTR_8g094410 33.684 190 120 3 16 205 142 325 1.01e-24 104
MS.gene99026.t1 MTR_8g094410 30.932 236 99 11 152 384 14 188 5.91e-17 82.0
MS.gene99026.t1 MTR_8g094410 30.124 322 197 11 51 360 18 323 1.46e-33 128
MS.gene99026.t1 MTR_8g094410 32.365 241 149 6 19 252 93 326 1.28e-32 125
MS.gene99026.t1 MTR_8g094410 31.868 273 166 8 18 277 36 301 3.40e-27 111
MS.gene99026.t1 MTR_8g094410 33.684 190 120 3 16 205 142 325 1.14e-24 103
MS.gene99026.t1 MTR_8g094410 30.508 236 100 10 152 384 14 188 1.30e-16 80.9
MS.gene99026.t1 MTR_1g099220 27.154 383 210 8 12 383 296 620 1.13e-32 130
MS.gene99026.t1 MTR_1g099220 28.743 167 108 4 15 177 469 628 1.54e-12 69.7
MS.gene99026.t1 MTR_3g064560 28.460 383 204 10 12 383 321 644 2.23e-32 129
MS.gene99026.t1 MTR_3g064560 26.829 164 117 2 4 166 483 644 3.72e-13 71.6
MS.gene99026.t1 MTR_3g064560 26.667 330 176 11 67 384 267 542 4.17e-11 65.1
MS.gene99026.t1 MTR_7g072410 29.921 381 195 13 12 380 281 601 1.40e-31 127
MS.gene99026.t1 MTR_7g072410 30.435 161 108 3 1 159 439 597 1.07e-12 70.1
MS.gene99026.t1 MTR_6g034795 27.320 388 203 9 12 383 293 617 5.93e-31 125
MS.gene99026.t1 MTR_6g034795 28.824 170 104 6 15 177 466 625 6.33e-12 67.8
MS.gene99026.t1 MTR_1g042800 26.842 380 209 10 16 383 280 602 1.88e-30 124
MS.gene99026.t1 MTR_1g042800 27.568 185 123 5 14 192 450 629 9.86e-13 70.5
MS.gene99026.t1 MTR_1g042800 26.727 333 165 11 70 384 228 499 4.13e-12 68.6
MS.gene99026.t1 MTR_4g029410 28.084 381 202 10 12 380 83 403 2.10e-28 117
MS.gene99026.t1 MTR_4g029410 31.765 170 107 4 15 182 255 417 5.07e-16 80.5
MS.gene99026.t1 MTR_7g063440 31.600 250 136 5 48 267 141 385 6.13e-28 113
MS.gene99026.t1 MTR_7g063440 30.453 243 119 8 153 361 141 367 1.01e-20 93.2
MS.gene99026.t1 MTR_0024s0070 27.889 398 238 12 18 385 7 385 7.77e-28 113
MS.gene99026.t1 MTR_0024s0070 27.246 334 208 11 67 385 5 318 3.98e-26 108
MS.gene99026.t1 MTR_0024s0070 32.051 234 138 6 15 238 109 331 1.79e-23 101
MS.gene99026.t1 MTR_0024s0070 33.898 177 96 4 11 168 211 385 4.71e-18 85.5
MS.gene99026.t1 MTR_8g094410 33.019 212 121 6 51 252 2 202 1.13e-27 110
MS.gene99026.t1 MTR_8g094410 33.684 190 120 3 16 205 18 201 1.21e-25 105
MS.gene99026.t1 MTR_8g094410 29.767 215 124 9 156 360 2 199 1.85e-19 87.8
MS.gene99026.t1 MTR_7g063440 31.600 250 136 5 48 267 233 477 1.23e-27 114
MS.gene99026.t1 MTR_7g063440 30.453 243 119 8 153 361 233 459 1.56e-20 93.6
MS.gene99026.t1 MTR_3g097060 27.941 408 241 14 9 383 29 416 1.30e-26 110
MS.gene99026.t1 MTR_3g097060 25.749 334 210 9 70 384 40 354 5.71e-20 91.3
MS.gene99026.t1 MTR_0095s0070 31.416 226 141 6 67 284 30 249 2.24e-26 107
MS.gene99026.t1 MTR_0095s0070 31.687 243 151 8 18 252 32 267 4.78e-24 100
MS.gene99026.t1 MTR_0095s0070 28.980 245 152 5 124 360 34 264 2.24e-22 95.9
MS.gene99026.t1 MTR_0095s0070 31.696 224 123 8 173 384 28 233 2.35e-22 95.9
MS.gene99026.t1 MTR_0095s0070 37.241 145 88 3 13 156 132 274 7.57e-22 94.7
MS.gene99026.t1 MTR_0095s0070 34.066 182 114 4 7 187 74 250 4.17e-20 89.7
MS.gene99026.t1 MTR_2g079610 27.714 350 226 9 12 346 127 464 7.06e-25 106
MS.gene99026.t1 MTR_3g069030 27.595 395 220 14 15 361 65 441 1.00e-23 102
MS.gene99026.t1 MTR_3g069030 33.987 153 94 5 18 166 310 459 9.80e-12 66.6
MS.gene99026.t1 MTR_3g097060 27.762 353 217 12 9 340 29 364 1.20e-22 98.6
MS.gene99026.t1 MTR_3g097060 25.749 334 210 9 70 384 40 354 4.23e-20 91.3
MS.gene99026.t1 MTR_7g086050 27.143 280 177 8 16 274 155 428 8.40e-22 98.2
MS.gene99026.t1 MTR_7g086050 28.041 296 170 12 66 337 154 430 3.56e-18 87.0
MS.gene99026.t1 MTR_7g086050 25.581 258 169 5 16 267 266 506 8.05e-14 73.6
MS.gene99026.t1 MTR_7g063440 31.000 200 110 3 48 224 233 427 2.46e-20 92.4
MS.gene99026.t1 MTR_7g063440 31.638 177 95 3 15 166 251 426 1.17e-15 78.6
MS.gene99026.t1 MTR_7g063440 27.897 233 129 8 153 384 233 427 6.41e-11 63.9
MS.gene99026.t1 MTR_7g016640 25.798 376 224 13 9 344 16 376 5.13e-19 88.2
MS.gene99026.t1 MTR_3g086300 25.199 377 240 13 16 361 167 532 7.50e-19 88.6
MS.gene99026.t1 MTR_3g086300 27.019 359 221 11 54 385 154 498 2.63e-17 84.0
MS.gene99026.t1 MTR_3g086300 28.745 247 152 9 12 238 269 511 2.42e-13 71.6
MS.gene99026.t1 MTR_7g016640 25.798 376 224 13 9 344 16 376 9.98e-19 87.8
MS.gene99026.t1 MTR_7g016640 27.606 355 201 12 24 344 136 468 3.38e-15 77.4
MS.gene99026.t1 MTR_3g113250 25.867 375 227 14 36 383 49 399 1.48e-18 87.8
MS.gene99026.t1 MTR_3g113250 27.675 271 161 9 13 262 76 332 5.55e-16 79.7
MS.gene99026.t1 MTR_1g006695 25.191 393 240 15 15 359 32 418 1.15e-14 75.5
MS.gene99026.t1 MTR_1g006695 30.859 256 148 10 153 384 14 264 8.47e-13 69.7
MS.gene99026.t1 MTR_5g020630 25.806 372 215 12 16 360 82 419 1.96e-14 74.7
MS.gene99026.t1 MTR_5g020630 25.826 333 203 12 67 385 26 328 4.77e-11 64.3
MS.gene99026.t1 MTR_3g109650 24.570 407 233 15 16 359 36 431 4.95e-13 70.9
MS.gene99026.t1 MTR_3g109650 27.660 235 134 10 7 210 216 445 6.65e-13 70.5
MS.gene99026.t1 MTR_3g109650 27.660 235 134 10 7 210 118 347 6.91e-13 70.1
MS.gene99026.t1 MTR_7g451760 36.810 163 94 4 12 166 111 272 7.70e-13 68.6
MS.gene99026.t1 MTR_7g047560 36.810 163 94 4 12 166 111 272 7.70e-13 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99026.t1 AT1G27060 60.982 387 136 5 2 385 3 377 6.49e-156 444
MS.gene99026.t1 AT5G63860 29.589 365 226 10 32 385 1 345 4.09e-43 156
MS.gene99026.t1 AT5G63860 31.549 355 212 10 18 359 38 374 3.43e-42 153
MS.gene99026.t1 AT5G63860 33.456 272 164 7 16 277 89 353 8.52e-33 128
MS.gene99026.t1 AT5G63860 30.769 247 158 5 13 252 138 378 6.30e-31 122
MS.gene99026.t1 AT5G63860 31.250 224 142 5 4 226 181 393 1.70e-28 115
MS.gene99026.t1 AT5G12350 33.333 372 208 12 34 383 295 648 1.32e-41 156
MS.gene99026.t1 AT5G12350 27.972 286 186 5 17 284 330 613 9.52e-26 110
MS.gene99026.t1 AT5G12350 31.973 147 96 3 15 159 497 641 3.26e-14 75.1
MS.gene99026.t1 AT5G19420 32.796 372 210 11 34 383 299 652 1.36e-41 156
MS.gene99026.t1 AT5G19420 27.273 286 188 5 17 284 334 617 5.44e-25 107
MS.gene99026.t1 AT5G19420 30.822 146 99 2 15 159 501 645 2.09e-13 72.4
MS.gene99026.t1 AT5G19420 32.796 372 210 11 34 383 333 686 1.57e-41 156
MS.gene99026.t1 AT5G19420 27.273 286 188 5 17 284 368 651 6.08e-25 107
MS.gene99026.t1 AT5G19420 30.822 146 99 2 15 159 535 679 2.39e-13 72.4
MS.gene99026.t1 AT5G19420 32.796 372 210 11 34 383 299 652 1.61e-41 156
MS.gene99026.t1 AT5G19420 27.148 291 192 5 12 284 329 617 5.75e-25 107
MS.gene99026.t1 AT5G19420 30.822 146 99 2 15 159 501 645 3.28e-13 71.6
MS.gene99026.t1 AT5G42140 30.469 384 196 11 12 383 294 618 5.15e-35 137
MS.gene99026.t1 AT5G42140 29.878 164 110 3 15 177 467 626 3.74e-13 71.6
MS.gene99026.t1 AT5G42140 24.781 343 174 10 65 384 234 515 5.85e-12 68.2
MS.gene99026.t1 AT5G42140 30.469 384 196 11 12 383 294 618 5.15e-35 137
MS.gene99026.t1 AT5G42140 29.878 164 110 3 15 177 467 626 3.74e-13 71.6
MS.gene99026.t1 AT5G42140 24.781 343 174 10 65 384 234 515 5.85e-12 68.2
MS.gene99026.t1 AT5G08710 28.256 407 250 11 4 383 39 430 1.03e-33 130
MS.gene99026.t1 AT5G08710 30.154 325 152 9 124 384 55 368 4.57e-18 85.9
MS.gene99026.t1 AT4G14368 30.946 391 229 14 16 383 238 610 8.95e-33 130
MS.gene99026.t1 AT4G14368 28.070 285 183 8 12 277 287 568 2.05e-22 100
MS.gene99026.t1 AT4G14368 30.625 160 109 2 1 159 445 603 3.62e-14 74.7
MS.gene99026.t1 AT4G14368 30.946 391 229 14 16 383 231 603 9.40e-33 130
MS.gene99026.t1 AT4G14368 28.082 292 188 8 12 284 280 568 1.75e-22 100
MS.gene99026.t1 AT4G14368 28.141 199 140 3 1 197 438 635 4.27e-14 74.7
MS.gene99026.t1 AT4G14368 30.946 391 229 14 16 383 236 608 1.01e-32 130
MS.gene99026.t1 AT4G14368 28.082 292 188 8 12 284 285 573 1.75e-22 100
MS.gene99026.t1 AT4G14368 28.141 199 140 3 1 197 443 640 3.94e-14 74.7
MS.gene99026.t1 AT4G14368 30.946 391 229 14 16 383 238 610 1.09e-32 130
MS.gene99026.t1 AT4G14368 28.082 292 188 8 12 284 287 575 1.92e-22 100
MS.gene99026.t1 AT4G14368 28.141 199 140 3 1 197 445 642 4.47e-14 74.7
MS.gene99026.t1 AT3G23270 30.711 394 226 13 16 383 219 591 2.65e-32 129
MS.gene99026.t1 AT3G23270 28.042 189 133 3 6 192 431 618 4.34e-14 74.7
MS.gene99026.t1 AT3G23270 30.711 394 226 13 16 383 223 595 2.89e-32 129
MS.gene99026.t1 AT3G23270 28.042 189 133 3 6 192 435 622 4.67e-14 74.3
MS.gene99026.t1 AT1G69710 31.362 389 188 13 12 383 304 630 3.18e-31 126
MS.gene99026.t1 AT1G69710 26.506 166 118 3 3 166 467 630 8.84e-12 67.4
MS.gene99026.t1 AT1G69710 31.362 389 188 13 12 383 317 643 3.86e-31 125
MS.gene99026.t1 AT1G69710 26.506 166 118 3 3 166 480 643 9.36e-12 67.4
MS.gene99026.t1 AT5G16040 30.172 348 207 11 18 348 9 337 5.71e-31 122
MS.gene99026.t1 AT5G16040 29.204 339 206 12 61 385 1 319 6.06e-28 114
MS.gene99026.t1 AT5G16040 31.760 233 139 6 15 238 111 332 1.75e-24 103
MS.gene99026.t1 AT5G16040 31.579 171 99 3 16 168 217 387 5.46e-17 82.4
MS.gene99026.t1 AT1G65920 30.256 390 224 15 19 383 218 584 1.34e-30 124
MS.gene99026.t1 AT1G65920 30.256 390 224 15 19 383 264 630 1.41e-30 124
MS.gene99026.t1 AT1G76950 28.760 379 225 14 29 383 267 624 8.16e-30 122
MS.gene99026.t1 AT1G76950 29.940 167 106 4 15 177 473 632 1.57e-14 75.9
MS.gene99026.t1 AT3G02510 28.701 331 206 11 67 385 7 319 3.74e-29 117
MS.gene99026.t1 AT3G02510 28.736 348 212 11 18 348 9 337 4.11e-28 114
MS.gene99026.t1 AT3G02510 30.472 233 142 5 15 238 111 332 8.86e-25 104
MS.gene99026.t1 AT3G02510 32.386 176 101 5 11 168 212 387 2.43e-15 77.4
MS.gene99026.t1 AT3G47660 28.010 407 229 17 16 386 113 491 2.82e-28 117
MS.gene99026.t1 AT3G47660 27.899 276 187 5 12 277 171 444 2.35e-24 105
MS.gene99026.t1 AT3G47660 29.412 170 108 5 15 182 340 499 1.89e-13 72.4
MS.gene99026.t1 AT3G47660 28.010 407 229 17 16 386 180 558 2.92e-28 117
MS.gene99026.t1 AT3G47660 27.899 276 187 5 12 277 238 511 2.47e-24 105
MS.gene99026.t1 AT3G47660 29.412 170 108 5 15 182 407 566 2.06e-13 72.4
MS.gene99026.t1 AT3G47660 28.010 407 229 17 16 386 258 636 3.66e-28 117
MS.gene99026.t1 AT3G47660 27.899 276 187 5 12 277 316 589 3.09e-24 105
MS.gene99026.t1 AT3G47660 29.412 170 108 5 15 182 485 644 1.49e-13 72.8
MS.gene99026.t1 AT3G47660 28.010 407 229 17 16 386 255 633 3.80e-28 117
MS.gene99026.t1 AT3G47660 27.899 276 187 5 12 277 313 586 2.95e-24 105
MS.gene99026.t1 AT3G47660 29.412 170 108 5 15 182 482 641 1.46e-13 72.8
MS.gene99026.t1 AT3G47660 28.010 407 229 17 16 386 255 633 3.80e-28 117
MS.gene99026.t1 AT3G47660 27.899 276 187 5 12 277 313 586 2.95e-24 105
MS.gene99026.t1 AT3G47660 29.412 170 108 5 15 182 482 641 1.46e-13 72.8
MS.gene99026.t1 AT3G47660 28.010 407 229 17 16 386 258 636 4.54e-28 116
MS.gene99026.t1 AT3G47660 27.899 276 187 5 12 277 316 589 3.15e-24 105
MS.gene99026.t1 AT3G47660 29.412 170 108 5 15 182 485 644 1.46e-13 72.8
MS.gene99026.t1 AT3G47660 28.010 407 229 17 16 386 294 672 5.88e-28 116
MS.gene99026.t1 AT3G47660 27.899 276 187 5 12 277 352 625 4.26e-24 105
MS.gene99026.t1 AT3G47660 29.412 170 108 5 15 182 521 680 2.13e-13 72.4
MS.gene99026.t1 AT3G02510 28.013 307 194 10 67 361 7 298 3.01e-26 107
MS.gene99026.t1 AT3G02510 27.703 296 185 9 18 296 9 292 3.16e-21 93.6
MS.gene99026.t1 AT3G02510 28.365 208 129 5 15 213 111 307 3.16e-17 82.0
MS.gene99026.t1 AT5G16040 28.704 324 202 11 61 370 1 309 7.82e-26 107
MS.gene99026.t1 AT5G16040 29.054 296 181 9 18 296 9 292 2.13e-22 97.4
MS.gene99026.t1 AT5G16040 29.384 211 129 7 15 216 111 310 1.42e-16 80.5
MS.gene99026.t1 AT3G02510 30.472 233 142 5 15 238 53 274 3.90e-25 105
MS.gene99026.t1 AT3G02510 28.777 278 169 10 120 385 1 261 2.93e-22 97.1
MS.gene99026.t1 AT3G02510 26.923 286 175 11 16 280 1 273 4.35e-19 87.8
MS.gene99026.t1 AT3G02510 27.852 298 180 10 67 348 1 279 4.88e-19 87.8
MS.gene99026.t1 AT3G02510 32.386 176 101 5 11 168 154 329 1.83e-15 77.4
MS.gene99026.t1 AT5G08710 29.392 296 191 6 4 284 39 331 4.83e-25 104
MS.gene99026.t1 AT5G08710 32.971 276 157 8 124 385 55 316 7.32e-22 95.9
MS.gene99026.t1 AT3G03790 25.128 390 234 12 6 373 142 495 1.69e-23 103
MS.gene99026.t1 AT3G03790 29.375 320 182 13 43 337 127 427 1.26e-18 88.6
MS.gene99026.t1 AT3G15430 28.571 315 193 11 48 346 165 463 7.87e-23 100
MS.gene99026.t1 AT3G15430 29.775 178 115 4 16 187 290 463 1.78e-16 81.3
MS.gene99026.t1 AT3G15430 26.190 294 190 10 103 385 115 392 5.59e-15 76.6
MS.gene99026.t1 AT3G15430 26.168 321 194 12 51 351 116 413 3.94e-14 73.9
MS.gene99026.t1 AT3G15430 28.571 315 193 11 48 346 165 463 7.87e-23 100
MS.gene99026.t1 AT3G15430 29.775 178 115 4 16 187 290 463 1.78e-16 81.3
MS.gene99026.t1 AT3G15430 26.190 294 190 10 103 385 115 392 5.59e-15 76.6
MS.gene99026.t1 AT3G15430 26.168 321 194 12 51 351 116 413 3.94e-14 73.9
MS.gene99026.t1 AT3G15430 28.571 315 193 11 48 346 165 463 7.87e-23 100
MS.gene99026.t1 AT3G15430 29.775 178 115 4 16 187 290 463 1.78e-16 81.3
MS.gene99026.t1 AT3G15430 26.190 294 190 10 103 385 115 392 5.59e-15 76.6
MS.gene99026.t1 AT3G15430 26.168 321 194 12 51 351 116 413 3.94e-14 73.9
MS.gene99026.t1 AT3G15430 28.571 315 193 11 48 346 165 463 7.87e-23 100
MS.gene99026.t1 AT3G15430 29.775 178 115 4 16 187 290 463 1.78e-16 81.3
MS.gene99026.t1 AT3G15430 26.190 294 190 10 103 385 115 392 5.59e-15 76.6
MS.gene99026.t1 AT3G15430 26.168 321 194 12 51 351 116 413 3.94e-14 73.9
MS.gene99026.t1 AT3G15430 28.571 315 193 11 48 346 165 463 7.87e-23 100
MS.gene99026.t1 AT3G15430 29.775 178 115 4 16 187 290 463 1.78e-16 81.3
MS.gene99026.t1 AT3G15430 26.190 294 190 10 103 385 115 392 5.59e-15 76.6
MS.gene99026.t1 AT3G15430 26.168 321 194 12 51 351 116 413 3.94e-14 73.9
MS.gene99026.t1 AT3G15430 28.571 315 193 11 48 346 165 463 7.87e-23 100
MS.gene99026.t1 AT3G15430 29.775 178 115 4 16 187 290 463 1.78e-16 81.3
MS.gene99026.t1 AT3G15430 26.190 294 190 10 103 385 115 392 5.59e-15 76.6
MS.gene99026.t1 AT3G15430 26.168 321 194 12 51 351 116 413 3.94e-14 73.9
MS.gene99026.t1 AT3G53830 30.502 259 134 8 48 267 216 467 1.49e-22 99.4
MS.gene99026.t1 AT3G53830 29.021 286 152 9 122 369 186 458 3.52e-21 95.5
MS.gene99026.t1 AT3G53830 29.439 214 115 6 15 196 234 443 2.98e-16 80.5
MS.gene99026.t1 AT5G60870 27.446 419 226 16 4 373 38 427 1.71e-22 99.0
MS.gene99026.t1 AT5G60870 26.549 339 206 14 16 329 121 441 3.74e-17 83.2
MS.gene99026.t1 AT5G60870 33.537 164 100 4 12 167 279 441 7.71e-16 79.3
MS.gene99026.t1 AT3G53830 30.370 270 141 9 38 267 233 495 2.00e-22 99.4
MS.gene99026.t1 AT3G53830 29.021 286 152 9 122 369 214 486 5.18e-21 95.1
MS.gene99026.t1 AT3G53830 29.439 214 115 6 15 196 262 471 3.99e-16 80.1
MS.gene99026.t1 AT3G03790 25.000 380 227 12 16 373 155 498 3.34e-22 99.4
MS.gene99026.t1 AT3G03790 29.392 296 166 12 66 337 154 430 1.22e-17 85.5
MS.gene99026.t1 AT3G03790 25.000 380 227 12 16 373 155 498 4.29e-22 99.0
MS.gene99026.t1 AT3G03790 29.730 296 165 12 66 337 154 430 1.32e-17 85.5
MS.gene99026.t1 AT5G48330 25.845 414 232 11 5 359 34 431 5.31e-22 97.4
MS.gene99026.t1 AT5G48330 25.783 415 232 11 5 359 34 432 7.44e-22 97.1
MS.gene99026.t1 AT3G55580 28.302 265 151 6 37 267 224 483 2.54e-21 95.9
MS.gene99026.t1 AT3G55580 28.520 277 151 9 142 386 225 486 2.56e-21 95.9
MS.gene99026.t1 AT5G60870 30.503 318 165 9 66 346 49 347 2.69e-21 95.1
MS.gene99026.t1 AT5G60870 26.790 377 199 15 1 329 35 382 2.50e-17 83.2
MS.gene99026.t1 AT5G60870 30.503 318 165 9 66 346 49 347 3.06e-21 95.5
MS.gene99026.t1 AT5G60870 26.995 426 226 17 4 373 38 434 2.79e-20 92.4
MS.gene99026.t1 AT5G60870 26.301 346 205 15 16 329 121 448 7.76e-16 79.3
MS.gene99026.t1 AT5G60870 32.749 171 99 5 12 167 279 448 1.76e-14 75.1
MS.gene99026.t1 AT1G19880 26.023 342 200 12 53 361 65 386 4.52e-19 89.4
MS.gene99026.t1 AT1G19880 25.356 351 218 11 13 334 76 411 3.12e-17 83.6
MS.gene99026.t1 AT1G19880 25.342 292 161 10 81 361 38 283 4.81e-12 67.8
MS.gene99026.t1 AT3G26100 27.322 366 221 13 49 385 146 495 1.72e-18 87.4
MS.gene99026.t1 AT3G26100 26.486 370 244 13 16 361 164 529 3.98e-18 86.3
MS.gene99026.t1 AT3G26100 27.322 366 221 13 49 385 146 495 1.72e-18 87.4
MS.gene99026.t1 AT3G26100 26.486 370 244 13 16 361 164 529 3.98e-18 86.3
MS.gene99026.t1 AT3G26100 27.322 366 221 13 49 385 146 495 1.72e-18 87.4
MS.gene99026.t1 AT3G26100 26.486 370 244 13 16 361 164 529 3.98e-18 86.3
MS.gene99026.t1 AT3G26100 27.322 366 221 13 49 385 46 395 2.34e-18 86.7
MS.gene99026.t1 AT3G26100 26.486 370 244 13 16 361 64 429 2.92e-18 86.3
MS.gene99026.t1 AT3G26100 27.322 366 221 13 49 385 46 395 2.34e-18 86.7
MS.gene99026.t1 AT3G26100 26.486 370 244 13 16 361 64 429 2.92e-18 86.3
MS.gene99026.t1 AT3G26100 27.322 366 221 13 49 385 46 395 2.34e-18 86.7
MS.gene99026.t1 AT3G26100 26.486 370 244 13 16 361 64 429 2.92e-18 86.3
MS.gene99026.t1 AT3G02300 27.198 364 220 13 16 344 22 375 3.91e-18 86.3
MS.gene99026.t1 AT3G02300 31.953 169 96 5 15 171 142 303 2.09e-14 75.1
MS.gene99026.t1 AT3G02300 25.559 313 195 7 56 342 11 311 2.84e-14 74.3
MS.gene99026.t1 AT3G02300 27.198 364 220 13 16 344 33 386 3.99e-18 86.3
MS.gene99026.t1 AT3G02300 31.953 169 96 5 15 171 153 314 1.94e-14 75.1
MS.gene99026.t1 AT3G02300 25.559 313 195 7 56 342 22 322 3.19e-14 74.3
MS.gene99026.t1 AT3G53830 30.952 210 106 6 48 225 216 418 3.36e-17 83.2
MS.gene99026.t1 AT3G53830 29.891 184 96 5 15 166 234 416 1.58e-14 75.1
MS.gene99026.t1 AT3G53830 30.769 221 113 7 38 225 233 446 3.54e-17 83.2
MS.gene99026.t1 AT3G53830 29.891 184 96 5 15 166 262 444 2.31e-14 74.7
MS.gene99026.t1 AT5G60870 33.537 164 100 4 12 167 110 272 1.17e-16 79.7
MS.gene99026.t1 AT5G60870 29.412 221 143 6 20 233 8 222 2.49e-15 75.9
MS.gene99026.t1 AT5G60870 26.289 194 130 4 37 223 84 271 7.46e-14 71.6
MS.gene99026.t1 AT5G11580 27.763 371 173 14 46 376 16 331 4.30e-13 71.2
MS.gene99026.t1 AT5G11580 28.571 287 151 12 140 384 5 279 5.56e-12 67.8

Find 118 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCTTTCAAATCAAGTTTA+TGG 0.192149 5.4:-27502315 MS.gene99026:CDS
TCAAATCAAGTTTATGGATT+TGG 0.242600 5.4:-27502309 MS.gene99026:CDS
AAGAGAAAGAAGAAAGATTA+TGG 0.256678 5.4:-27504854 MS.gene99026:CDS
AACCCATGTCTCTGCTGGTT+GGG 0.284730 5.4:-27503304 MS.gene99026:CDS
TAACCAAGATTTACAGTAAC+AGG 0.334861 5.4:+27501224 None:intergenic
GAGAAAGCCCCTGGCCTTGA+TGG 0.338139 5.4:-27501455 MS.gene99026:CDS
GATCATAGTGCTGCATTATC+TGG 0.362532 5.4:-27502171 MS.gene99026:intron
ACTTGTGGGGATGGTTCCTT+TGG 0.367581 5.4:-27503134 MS.gene99026:CDS
TCATGGGGTAGGGGAAATTC+TGG 0.369753 5.4:-27503402 MS.gene99026:CDS
TGCCTGTTCACTTGTGGGGA+TGG 0.382815 5.4:-27503143 MS.gene99026:CDS
GATGGTTCCTTTGGTCAACT+TGG 0.383105 5.4:-27503125 MS.gene99026:CDS
TTTGAAGATGAGGAAATAGT+TGG 0.385379 5.4:-27502210 MS.gene99026:CDS
AGAAGAAAGATTATGGAGTT+GGG 0.389214 5.4:-27504847 MS.gene99026:CDS
GCTGGAACAGATGGTCAATT+AGG 0.391068 5.4:-27504822 MS.gene99026:CDS
TCCAATGATGTTATAGCCTT+GGG 0.391517 5.4:+27503339 None:intergenic
AGTCCTGTTACTGTAAATCT+TGG 0.393349 5.4:-27501227 MS.gene99026:CDS
AAGAAGAAAGATTATGGAGT+TGG 0.398481 5.4:-27504848 MS.gene99026:CDS
ATAGTTGGAATTTCTGCAAA+TGG 0.405917 5.4:-27502195 MS.gene99026:CDS
CAAGTTTATGGATTTGGCTC+TGG 0.409915 5.4:-27502303 MS.gene99026:CDS
CTGGGTGCCTGTTCACTTGT+GGG 0.411326 5.4:-27503148 MS.gene99026:CDS
CTCTGGTAAGCGTGGTCAGT+TGG 0.416091 5.4:-27502286 MS.gene99026:CDS
GTCCAATGATGTTATAGCCT+TGG 0.416419 5.4:+27503338 None:intergenic
GAGCATGGTCAACTAGGGTT+AGG 0.420516 5.4:-27501269 MS.gene99026:CDS
AACAAAAGATGACACTTTGA+TGG 0.424790 5.4:+27503073 None:intergenic
TTGTTTGGTTTCTAGATACT+GGG 0.427216 5.4:-27503166 MS.gene99026:intron
CACCTGGGGAAGAGGCTTCA+AGG 0.427359 5.4:-27501978 MS.gene99026:CDS
AGTAGCAATATCAGTAATCT+TGG 0.427864 5.4:+27501430 None:intergenic
AACCATCCCCACAAGTGAAC+AGG 0.428266 5.4:+27503141 None:intergenic
ATGGTTCCTTTGGTCAACTT+GGG 0.431277 5.4:-27503124 MS.gene99026:CDS
CATTCTCTTGTCTTGTTGAA+AGG 0.435372 5.4:-27503014 MS.gene99026:intron
TCCCAAGGCTATAACATCAT+TGG 0.442483 5.4:-27503340 MS.gene99026:CDS
ACCCATGTCTCTGCTGGTTG+GGG 0.447327 5.4:-27503303 MS.gene99026:CDS
GCCCTTGAAGCCTCTTCCCC+AGG 0.448907 5.4:+27501976 None:intergenic
AGCATGGTCAACTAGGGTTA+GGG 0.449489 5.4:-27501268 MS.gene99026:CDS
TCAAATCCACTAGTAACTTC+AGG 0.454633 5.4:+27502228 None:intergenic
ATCAGAGTTTATTGTGGAAG+TGG 0.455881 5.4:-27501179 MS.gene99026:CDS
AGATTCAAGAGAAGCTAACT+TGG 0.456652 5.4:-27501477 MS.gene99026:CDS
AGATTATGGAGTTGGGGTGC+TGG 0.458775 5.4:-27504840 MS.gene99026:CDS
TCTGCTGGTTGGGGCCACTC+AGG 0.467775 5.4:-27503294 MS.gene99026:CDS
TAACCCATGTCTCTGCTGGT+TGG 0.470693 5.4:-27503305 MS.gene99026:CDS
AAGATTACTGATATTGCTAC+TGG 0.474658 5.4:-27501428 MS.gene99026:CDS
AAGGTATTATCATGGGGTAG+GGG 0.475548 5.4:-27503411 MS.gene99026:CDS
AGAAATAAAGACATGGGGAT+GGG 0.478219 5.4:-27501294 MS.gene99026:CDS
AGACCGGCTAAGTCGTTATT+CGG 0.478608 5.4:-27501706 MS.gene99026:intron
ACAGATGGTCAATTAGGAAC+AGG 0.479587 5.4:-27504816 MS.gene99026:CDS
CATCTGTACACCTGGGGAAG+AGG 0.479854 5.4:-27501986 MS.gene99026:CDS
GAAATAAAGACATGGGGATG+GGG 0.481351 5.4:-27501293 MS.gene99026:CDS
ACATGGGGATGGGGCGAGCA+TGG 0.482441 5.4:-27501284 MS.gene99026:CDS
TTACAGTAACAGGACTGATT+CGG 0.486307 5.4:+27501234 None:intergenic
TGGGGCGAGCATGGTCAACT+AGG 0.488900 5.4:-27501275 MS.gene99026:CDS
CAACTAGGGTTAGGGGATGA+TGG 0.489094 5.4:-27501260 MS.gene99026:CDS
CATGTCATCGCCTTAACCTC+TGG 0.489568 5.4:-27504714 MS.gene99026:intron
TTCATAACCCATGTCTCTGC+TGG 0.495164 5.4:-27503309 MS.gene99026:CDS
TCCTTTGGTCAACTTGGGCA+TGG 0.499608 5.4:-27503119 MS.gene99026:CDS
ACTGGGTGCCTGTTCACTTG+TGG 0.503316 5.4:-27503149 MS.gene99026:CDS
ATCTTGGTTCCATCAAGGCC+AGG 0.505192 5.4:+27501446 None:intergenic
AAATTTGTGTTTAGGTGAGG+GGG 0.512026 5.4:-27501785 MS.gene99026:intron
GAGCATTCTGTCCTTGTCAC+AGG 0.515862 5.4:-27501401 MS.gene99026:intron
TTGATGGACATCTGTACACC+TGG 0.516546 5.4:-27501994 MS.gene99026:CDS
AAATTTACTAAAGTCACTCT+AGG 0.522559 5.4:-27501911 MS.gene99026:CDS
CAGATGGGAAGGTATTATCA+TGG 0.524080 5.4:-27503419 MS.gene99026:CDS
GATGACATGAGCGCCGCCAC+AGG 0.526265 5.4:+27504728 None:intergenic
GCTAACTTGGAGAAAGCCCC+TGG 0.529070 5.4:-27501464 MS.gene99026:CDS
TGATCTTCACAATGCAAGAC+CGG 0.533680 5.4:-27501722 MS.gene99026:CDS
GGCCCCAACCAGCAGAGACA+TGG 0.534807 5.4:+27503301 None:intergenic
TGTTGATCAACATGTTGCAC+AGG 0.538380 5.4:-27503054 MS.gene99026:CDS
TCTGGTAAGCGTGGTCAGTT+GGG 0.538387 5.4:-27502285 MS.gene99026:CDS
GAAGGTATTATCATGGGGTA+GGG 0.540697 5.4:-27503412 MS.gene99026:CDS
GGAAGGTATTATCATGGGGT+AGG 0.544375 5.4:-27503413 MS.gene99026:CDS
AATCTTCCTGAAGTTACTAG+TGG 0.550183 5.4:-27502234 MS.gene99026:CDS
AGGGGAAATTCTGGTCAACT+AGG 0.550647 5.4:-27503393 MS.gene99026:CDS
AACCATGCTTTAGCTATGAC+TGG 0.553502 5.4:-27501884 MS.gene99026:intron
AGATGGGAAGGTATTATCAT+GGG 0.553947 5.4:-27503418 MS.gene99026:CDS
ACCTGGGGAAGAGGCTTCAA+GGG 0.555641 5.4:-27501977 MS.gene99026:CDS
AATGTACTAACCAGAGGTTA+AGG 0.560905 5.4:+27504704 None:intergenic
CAGTAATCTTGGTTCCATCA+AGG 0.562937 5.4:+27501441 None:intergenic
TAAATTTGTGTTTAGGTGAG+GGG 0.563697 5.4:-27501786 MS.gene99026:intron
CAATAACATGTTGTATCCCA+AGG 0.565536 5.4:-27503355 MS.gene99026:CDS
TCTTGGTTCCATCAAGGCCA+GGG 0.567023 5.4:+27501447 None:intergenic
GAATGGAGAAATAAAGACAT+GGG 0.569308 5.4:-27501300 MS.gene99026:CDS
AGAGACAGAGAGAGTTGTTG+AGG 0.575614 5.4:+27504771 None:intergenic
GTCTCTTCACTTGCCTGTGG+CGG 0.578756 5.4:-27504741 MS.gene99026:CDS
GGGGCGAGCATGGTCAACTA+GGG 0.579034 5.4:-27501274 MS.gene99026:CDS
AATTCTGGTCAACTAGGCCA+TGG 0.580093 5.4:-27503387 MS.gene99026:CDS
TACTAGTGGATTTGAAGATG+AGG 0.580190 5.4:-27502220 MS.gene99026:CDS
AGTTGGGGTGCTGGAACAGA+TGG 0.581646 5.4:-27504831 MS.gene99026:CDS
GGGGAGGTTTATATGCTTGG+GGG 0.583462 5.4:-27501766 MS.gene99026:CDS
ACCATGCCCAAGTTGACCAA+AGG 0.586455 5.4:+27503118 None:intergenic
GAAGAAAGATTATGGAGTTG+GGG 0.592878 5.4:-27504846 MS.gene99026:CDS
GTACCGAATAACGACTTAGC+CGG 0.592936 5.4:+27501703 None:intergenic
GAGAAATAAAGACATGGGGA+TGG 0.597217 5.4:-27501295 MS.gene99026:CDS
TACCAGTCATAGCTAAAGCA+TGG 0.602812 5.4:+27501882 None:intergenic
TGTTATTGACAACCTCTCCA+TGG 0.602956 5.4:+27503370 None:intergenic
GCCCCAACCAGCAGAGACAT+GGG 0.603314 5.4:+27503302 None:intergenic
GGATTTGGCTCTGGTAAGCG+TGG 0.604891 5.4:-27502294 MS.gene99026:CDS
ACAAAAGATGACACTTTGAT+GGG 0.605437 5.4:+27503074 None:intergenic
GCATCAATCAGAGTTTATTG+TGG 0.610783 5.4:-27501185 MS.gene99026:CDS
AATTTACTAAAGTCACTCTA+GGG 0.618918 5.4:-27501910 MS.gene99026:CDS
GCATGGTCAACTAGGGTTAG+GGG 0.620068 5.4:-27501267 MS.gene99026:CDS
TTACTAAAGTCACTCTAGGG+TGG 0.623493 5.4:-27501907 MS.gene99026:CDS
AGAATGGAGAAATAAAGACA+TGG 0.623965 5.4:-27501301 MS.gene99026:CDS
CTTTCAACAAGACAAGAGAA+TGG 0.624720 5.4:+27503015 None:intergenic
GACGTAGAGTTTAAGCATTG+TGG 0.628921 5.4:+27501935 None:intergenic
TGGGTGCCTGTTCACTTGTG+GGG 0.629180 5.4:-27503147 MS.gene99026:CDS
ACTATATCTTGCCTGTGACA+AGG 0.631349 5.4:+27501390 None:intergenic
TAGAGTTTAAGCATTGTGGA+AGG 0.636834 5.4:+27501939 None:intergenic
CTTGGTTCCATCAAGGCCAG+GGG 0.639128 5.4:+27501448 None:intergenic
TCTTGGTTATGATCTGAATG+AGG 0.639316 5.4:-27501210 MS.gene99026:CDS
CATGTTGCACAGGTAGCATG+TGG 0.640388 5.4:-27503044 MS.gene99026:CDS
TCTGTCTCTTCACTTGCCTG+TGG 0.641419 5.4:-27504744 MS.gene99026:CDS
TGATGGACATCTGTACACCT+GGG 0.647907 5.4:-27501993 MS.gene99026:CDS
GAAGATCACTAAGCACTCCA+AGG 0.652649 5.4:+27501737 None:intergenic
AATGGAGAAATAAAGACATG+GGG 0.672946 5.4:-27501299 MS.gene99026:CDS
TGGTCAACTAGGCCATGGAG+AGG 0.677194 5.4:-27503382 MS.gene99026:CDS
GATGGGAAGGTATTATCATG+GGG 0.680554 5.4:-27503417 MS.gene99026:CDS
GATCACTAAGCACTCCAAGG+TGG 0.711419 5.4:+27501740 None:intergenic
GATGGACATCTGTACACCTG+GGG 0.712426 5.4:-27501992 MS.gene99026:CDS
AACCTGAAACAAAACCTGAG+TGG 0.725888 5.4:+27503280 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATCTTAAAAATAACTTA+TGG - chr5.4:27501719-27501738 MS.gene99026:CDS 10.0%
!!! AATAGATTTTATTTTATCTT+TGG + chr5.4:27503779-27503798 None:intergenic 10.0%
!!! ATATTTTTATGTTATTTCTA+CGG + chr5.4:27502308-27502327 None:intergenic 10.0%
!!! ATTTTGATTTTTTTTTTTGA+AGG - chr5.4:27501388-27501407 MS.gene99026:intron 10.0%
!! AGGAAATACATTAATTATAA+TGG - chr5.4:27504443-27504462 MS.gene99026:intron 15.0%
!!! AAAAAAAACTTATGGATTAA+TGG - chr5.4:27501921-27501940 MS.gene99026:CDS 15.0%
!!! ACATAAAAATATAGTGATTT+TGG - chr5.4:27502316-27502335 MS.gene99026:CDS 15.0%
!!! ATCCATAAGTTTTTTTTTTT+TGG + chr5.4:27501918-27501937 None:intergenic 15.0%
!!! GAATTCAAGTTTTAAAATTA+CGG - chr5.4:27503104-27503123 MS.gene99026:CDS 15.0%
!! AACTATAAAAAAAATGCAGA+TGG - chr5.4:27502598-27502617 MS.gene99026:intron 20.0%
!! AATATTCATTATCTCTCTAT+TGG - chr5.4:27504001-27504020 MS.gene99026:intron 20.0%
!! ACTATAAAAAAAATGCAGAT+GGG - chr5.4:27502599-27502618 MS.gene99026:intron 20.0%
!! AGAAACAAAATTCATTCAAA+AGG + chr5.4:27504227-27504246 None:intergenic 20.0%
!! GAAACAAAATTCATTCAAAA+GGG + chr5.4:27504226-27504245 None:intergenic 20.0%
!! GACCAAAAAAAAAAAACTTA+TGG - chr5.4:27501913-27501932 MS.gene99026:CDS 20.0%
!! TGTTTCTTAAATTTGTGTTT+AGG - chr5.4:27504240-27504259 MS.gene99026:intron 20.0%
!!! AACATTTTGATATTCTGTAT+TGG + chr5.4:27502527-27502546 None:intergenic 20.0%
!!! ACAAATCAAGAAAATTTTGT+GGG - chr5.4:27501657-27501676 MS.gene99026:intron 20.0%
!!! ACATTTTGATATTCTGTATT+GGG + chr5.4:27502526-27502545 None:intergenic 20.0%
!!! GAATTCAAGTTTTAAAACTA+CGG - chr5.4:27503484-27503503 MS.gene99026:intron 20.0%
!!! TACAAATCAAGAAAATTTTG+TGG - chr5.4:27501656-27501675 MS.gene99026:intron 20.0%
! AAATTTACTAAAGTCACTCT+AGG - chr5.4:27504122-27504141 MS.gene99026:intron 25.0%
! AAGAGAAAGAAGAAAGATTA+TGG - chr5.4:27501179-27501198 MS.gene99026:CDS 25.0%
! AATTTACTAAAGTCACTCTA+GGG - chr5.4:27504123-27504142 MS.gene99026:intron 25.0%
! ACAATTAAGTACAACTCAAA+TGG + chr5.4:27501499-27501518 None:intergenic 25.0%
! ATGTCTGTATAAATACTCAT+AGG - chr5.4:27503383-27503402 MS.gene99026:CDS 25.0%
! ATGTTAGAAGTAGTAATTCA+TGG + chr5.4:27502209-27502228 None:intergenic 25.0%
! CAACAGTCAAAAAAAAAATC+AGG + chr5.4:27501548-27501567 None:intergenic 25.0%
! CATGTGTTAATTTAAGAAAG+TGG + chr5.4:27503344-27503363 None:intergenic 25.0%
! TCAAATCAAGTTTATGGATT+TGG - chr5.4:27503724-27503743 MS.gene99026:intron 25.0%
! TGTCTTTCAAATCAAGTTTA+TGG - chr5.4:27503718-27503737 MS.gene99026:intron 25.0%
! TGTTAATTTAAGAAAGTGGA+CGG + chr5.4:27503340-27503359 None:intergenic 25.0%
! TTAAATTTGTGTTTAGGTGA+GGG - chr5.4:27504246-27504265 MS.gene99026:intron 25.0%
! TTTCAAATAATAGTCCACAA+TGG + chr5.4:27501968-27501987 None:intergenic 25.0%
! TTTGAACAATTTCCATGTAT+GGG - chr5.4:27502252-27502271 MS.gene99026:CDS 25.0%
!! ATTGTTTGAAACTTCAATGA+CGG - chr5.4:27501988-27502007 MS.gene99026:CDS 25.0%
!! GATATAGTTTTCTTATACGT+AGG - chr5.4:27504658-27504677 MS.gene99026:intron 25.0%
!! TTTTGAACAATTTCCATGTA+TGG - chr5.4:27502251-27502270 MS.gene99026:CDS 25.0%
!!! AACTTAAACAATGAGTTGAT+CGG + chr5.4:27502170-27502189 None:intergenic 25.0%
!!! CTGATTTTTTTTTTGACTGT+TGG - chr5.4:27501546-27501565 MS.gene99026:intron 25.0%
!!! TAATGGTGAAGTATTTTGAT+AGG - chr5.4:27501938-27501957 MS.gene99026:CDS 25.0%
!!! TGACAGCAGAAATTTTTTAA+GGG + chr5.4:27504473-27504492 None:intergenic 25.0%
!!! TTCATTTTAGAAGCAGATAT+TGG + chr5.4:27502792-27502811 None:intergenic 25.0%
!!! TTTTTATGTTATTTCTACGG+TGG + chr5.4:27502305-27502324 None:intergenic 25.0%
!!! TTTTTTTGAATTTCACATCC+AGG + chr5.4:27503960-27503979 None:intergenic 25.0%
AACAAAAGATGACACTTTGA+TGG + chr5.4:27502963-27502982 None:intergenic 30.0%
AAGAAGAAAGATTATGGAGT+TGG - chr5.4:27501185-27501204 MS.gene99026:CDS 30.0%
AAGATTACTGATATTGCTAC+TGG - chr5.4:27504605-27504624 MS.gene99026:intron 30.0%
AATATACCAACACATGTATG+TGG - chr5.4:27503291-27503310 MS.gene99026:CDS 30.0%
AATGGAGAAATAAAGACATG+GGG - chr5.4:27504734-27504753 MS.gene99026:CDS 30.0%
AATTGAAATGTACTAACCAG+AGG + chr5.4:27501338-27501357 None:intergenic 30.0%
ACAAAAGATGACACTTTGAT+GGG + chr5.4:27502962-27502981 None:intergenic 30.0%
AGAAGAAAGATTATGGAGTT+GGG - chr5.4:27501186-27501205 MS.gene99026:CDS 30.0%
AGAATGGAGAAATAAAGACA+TGG - chr5.4:27504732-27504751 MS.gene99026:CDS 30.0%
AGTACTAACACTTTAGATTG+AGG - chr5.4:27503603-27503622 MS.gene99026:intron 30.0%
AGTAGCAATATCAGTAATCT+TGG + chr5.4:27504606-27504625 None:intergenic 30.0%
ATAAGATAAATCAAGTCACC+TGG - chr5.4:27503939-27503958 MS.gene99026:intron 30.0%
ATAGTTGGAATTTCTGCAAA+TGG - chr5.4:27503838-27503857 MS.gene99026:intron 30.0%
CTTAAATTTGTGTTTAGGTG+AGG - chr5.4:27504245-27504264 MS.gene99026:intron 30.0%
CTTTCTCAATATTCAGAGAA+TGG - chr5.4:27504716-27504735 MS.gene99026:CDS 30.0%
GAATGGAGAAATAAAGACAT+GGG - chr5.4:27504733-27504752 MS.gene99026:CDS 30.0%
GATAGGAAATCATGAAACTT+TGG + chr5.4:27504192-27504211 None:intergenic 30.0%
TAAAAAAAATGCAGATGGGA+AGG - chr5.4:27502603-27502622 MS.gene99026:intron 30.0%
TAAATTTGTGTTTAGGTGAG+GGG - chr5.4:27504247-27504266 MS.gene99026:intron 30.0%
TAACCAAGATTTACAGTAAC+AGG + chr5.4:27504812-27504831 None:intergenic 30.0%
TGTGAATCACATATAATGCA+AGG + chr5.4:27503906-27503925 None:intergenic 30.0%
TGTTGGTATATTGTTAGTGT+CGG + chr5.4:27503283-27503302 None:intergenic 30.0%
TGTTTACAATTAAGTCCAGA+AGG + chr5.4:27504358-27504377 None:intergenic 30.0%
TTAGATGGTAAAAGTTGTGA+GGG - chr5.4:27502367-27502386 MS.gene99026:intron 30.0%
TTTGAAGATGAGGAAATAGT+TGG - chr5.4:27503823-27503842 MS.gene99026:intron 30.0%
! AATGTGAAGTAGAGTATTAC+AGG + chr5.4:27502422-27502441 None:intergenic 30.0%
! ATTTAAGACAGTGACTTGAT+GGG - chr5.4:27502058-27502077 MS.gene99026:intron 30.0%
! TGTCTTTTCTTGTTCTTGTT+TGG - chr5.4:27502852-27502871 MS.gene99026:intron 30.0%
! TTGTTTGGTTTCTAGATACT+GGG - chr5.4:27502867-27502886 MS.gene99026:intron 30.0%
!! GCTTCTAAAATGAATAGTTG+AGG - chr5.4:27502798-27502817 MS.gene99026:intron 30.0%
!! TTTAAGTTGTGATGACCAAT+AGG - chr5.4:27502182-27502201 MS.gene99026:CDS 30.0%
!!! GACAGCAGAAATTTTTTAAG+GGG + chr5.4:27504472-27504491 None:intergenic 30.0%
!!! GTGACAGCAGAAATTTTTTA+AGG + chr5.4:27504474-27504493 None:intergenic 30.0%
!!! TTTTTTGGTCTTAGATGAAG+TGG + chr5.4:27501903-27501922 None:intergenic 30.0%
AAATTTGTGTTTAGGTGAGG+GGG - chr5.4:27504248-27504267 MS.gene99026:intron 35.0%
AATCTTCCTGAAGTTACTAG+TGG - chr5.4:27503799-27503818 MS.gene99026:intron 35.0%
AATGTACTAACCAGAGGTTA+AGG + chr5.4:27501332-27501351 None:intergenic 35.0%
AATTGTGATCTCAAAGAGGT+TGG - chr5.4:27503194-27503213 MS.gene99026:intron 35.0%
ACTTTAGATTGAGGTATGTC+TGG - chr5.4:27503237-27503256 MS.gene99026:intron 35.0%
AGAAATAAAGACATGGGGAT+GGG - chr5.4:27504739-27504758 MS.gene99026:CDS 35.0%
AGATTCAAGAGAAGCTAACT+TGG - chr5.4:27504556-27504575 MS.gene99026:intron 35.0%
AGCACTTACACTTTAGATTG+AGG - chr5.4:27503228-27503247 MS.gene99026:intron 35.0%
AGTCCTGTTACTGTAAATCT+TGG - chr5.4:27504806-27504825 MS.gene99026:CDS 35.0%
AGTTTCGTCGCTAAGTTATT+TGG - chr5.4:27502453-27502472 MS.gene99026:intron 35.0%
ATCAGAGTTTATTGTGGAAG+TGG - chr5.4:27504854-27504873 MS.gene99026:CDS 35.0%
ATGAAACTCCGAAACATTTG+TGG + chr5.4:27504496-27504515 None:intergenic 35.0%
CAATAACATGTTGTATCCCA+AGG - chr5.4:27502678-27502697 MS.gene99026:intron 35.0%
CGTTCGTGACTATGATATTA+AGG + chr5.4:27503419-27503438 None:intergenic 35.0%
CTTAGATGGTAAAAGTTGTG+AGG - chr5.4:27502366-27502385 MS.gene99026:intron 35.0%
CTTTCAACAAGACAAGAGAA+TGG + chr5.4:27503021-27503040 None:intergenic 35.0%
GAAGAAAGATTATGGAGTTG+GGG - chr5.4:27501187-27501206 MS.gene99026:CDS 35.0%
GCATCAATCAGAGTTTATTG+TGG - chr5.4:27504848-27504867 MS.gene99026:CDS 35.0%
GTAGTAATTCATGGTCCTAT+TGG + chr5.4:27502200-27502219 None:intergenic 35.0%
TAATGCAAGGTAAGAAGTGA+TGG + chr5.4:27503893-27503912 None:intergenic 35.0%
TCAAATCCACTAGTAACTTC+AGG + chr5.4:27503808-27503827 None:intergenic 35.0%
TCCAATGATGTTATAGCCTT+GGG + chr5.4:27502697-27502716 None:intergenic 35.0%
TCTTAAATCTCTACTCTCGA+AGG + chr5.4:27502027-27502046 None:intergenic 35.0%
TCTTGGTTATGATCTGAATG+AGG - chr5.4:27504823-27504842 MS.gene99026:CDS 35.0%
TTACAGTAACAGGACTGATT+CGG + chr5.4:27504802-27504821 None:intergenic 35.0%
! CATTCTCTTGTCTTGTTGAA+AGG - chr5.4:27503019-27503038 MS.gene99026:CDS 35.0%
! CATTTAAGACAGTGACTTGA+TGG - chr5.4:27502057-27502076 MS.gene99026:intron 35.0%
! CTTGTCTTGTTGAAAGGTAT+TGG - chr5.4:27503025-27503044 MS.gene99026:CDS 35.0%
! CTTGTTTGGTTTCTAGATAC+TGG - chr5.4:27502866-27502885 MS.gene99026:intron 35.0%
! TAGAGTTTAAGCATTGTGGA+AGG + chr5.4:27504097-27504116 None:intergenic 35.0%
! TGACTTGATGGGTATAAGTT+TGG - chr5.4:27502069-27502088 MS.gene99026:intron 35.0%
!! ACACTTTAGATTGATGATGC+AGG - chr5.4:27503694-27503713 MS.gene99026:intron 35.0%
!! AGATGGGAAGGTATTATCAT+GGG - chr5.4:27502615-27502634 MS.gene99026:intron 35.0%
!! GTGTGTGAGTTTATTTTCAG+TGG - chr5.4:27501831-27501850 MS.gene99026:intron 35.0%
!! TACTAGTGGATTTGAAGATG+AGG - chr5.4:27503813-27503832 MS.gene99026:intron 35.0%
!! TCGTGTGAGTTTATTTTCAG+TGG - chr5.4:27501873-27501892 MS.gene99026:intron 35.0%
!!! AGCAGAAATTTTTTAAGGGG+TGG + chr5.4:27504469-27504488 None:intergenic 35.0%
!!! GTTGTTTTTGCATCAGTTGA+TGG - chr5.4:27504023-27504042 MS.gene99026:intron 35.0%
!!! TGGTGAAGTATTTTGATAGG+TGG - chr5.4:27501941-27501960 MS.gene99026:CDS 35.0%
AACCATGCTTTAGCTATGAC+TGG - chr5.4:27504149-27504168 MS.gene99026:intron 40.0%
AACCTGAAACAAAACCTGAG+TGG + chr5.4:27502756-27502775 None:intergenic 40.0%
ACAGATGGTCAATTAGGAAC+AGG - chr5.4:27501217-27501236 MS.gene99026:CDS 40.0%
ACGGTTACACAGTTGTATCA+CGG - chr5.4:27503123-27503142 MS.gene99026:CDS 40.0%
ACTATATCTTGCCTGTGACA+AGG + chr5.4:27504646-27504665 None:intergenic 40.0%
ACTTTAGATTGAGGCATGTC+TGG - chr5.4:27503612-27503631 MS.gene99026:intron 40.0%
ATGGTTCCTTTGGTCAACTT+GGG - chr5.4:27502909-27502928 MS.gene99026:intron 40.0%
ATGTGACCACATACATGTGT+TGG + chr5.4:27503300-27503319 None:intergenic 40.0%
ATTCAAAAGGGAAGTGACAG+AGG + chr5.4:27504214-27504233 None:intergenic 40.0%
CAGTAATCTTGGTTCCATCA+AGG + chr5.4:27504595-27504614 None:intergenic 40.0%
CTGCAATTGTGATCTCAAAG+AGG - chr5.4:27503190-27503209 MS.gene99026:intron 40.0%
GAAATAAAGACATGGGGATG+GGG - chr5.4:27504740-27504759 MS.gene99026:CDS 40.0%
GAGAAATAAAGACATGGGGA+TGG - chr5.4:27504738-27504757 MS.gene99026:CDS 40.0%
GATCATAGTGCTGCATTATC+TGG - chr5.4:27503862-27503881 MS.gene99026:intron 40.0%
GTCCAATGATGTTATAGCCT+TGG + chr5.4:27502698-27502717 None:intergenic 40.0%
TAAACTCACACACAACTGTG+AGG + chr5.4:27501824-27501843 None:intergenic 40.0%
TAATTACCCACCTATCAACG+TGG - chr5.4:27502278-27502297 MS.gene99026:CDS 40.0%
TACCAGTCATAGCTAAAGCA+TGG + chr5.4:27504154-27504173 None:intergenic 40.0%
TACCATCTAAGCTGCAACTA+CGG + chr5.4:27502357-27502376 None:intergenic 40.0%
TCCCAAGGCTATAACATCAT+TGG - chr5.4:27502693-27502712 MS.gene99026:intron 40.0%
TGATCTTCACAATGCAAGAC+CGG - chr5.4:27504311-27504330 MS.gene99026:intron 40.0%
TGCTGTCACCACAAATGTTT+CGG - chr5.4:27504485-27504504 MS.gene99026:intron 40.0%
TGTTATTGACAACCTCTCCA+TGG + chr5.4:27502666-27502685 None:intergenic 40.0%
TGTTGATCAACATGTTGCAC+AGG - chr5.4:27502979-27502998 MS.gene99026:intron 40.0%
! AAGGTATTATCATGGGGTAG+GGG - chr5.4:27502622-27502641 MS.gene99026:intron 40.0%
! ATATTGTTAGTGTCGGACAC+TGG + chr5.4:27503276-27503295 None:intergenic 40.0%
! CAAGTTTATGGATTTGGCTC+TGG - chr5.4:27503730-27503749 MS.gene99026:intron 40.0%
! GACGTAGAGTTTAAGCATTG+TGG + chr5.4:27504101-27504120 None:intergenic 40.0%
! TTACTAAAGTCACTCTAGGG+TGG - chr5.4:27504126-27504145 MS.gene99026:intron 40.0%
! TTTTGATAGGTGGTCCATTG+TGG - chr5.4:27501951-27501970 MS.gene99026:CDS 40.0%
!! ACTTTGATTTGCTAGAGTGC+GGG - chr5.4:27502390-27502409 MS.gene99026:intron 40.0%
!! CAGATGGGAAGGTATTATCA+TGG - chr5.4:27502614-27502633 MS.gene99026:intron 40.0%
!! GAAGGTATTATCATGGGGTA+GGG - chr5.4:27502621-27502640 MS.gene99026:intron 40.0%
!! GACTTTGATTTGCTAGAGTG+CGG - chr5.4:27502389-27502408 MS.gene99026:intron 40.0%
!! GATGGGAAGGTATTATCATG+GGG - chr5.4:27502616-27502635 MS.gene99026:intron 40.0%
AAAGGGAAGTGACAGAGGAT+AGG + chr5.4:27504209-27504228 None:intergenic 45.0%
AAATGCCGAAATTGCAAGGC+CGG - chr5.4:27501770-27501789 MS.gene99026:CDS 45.0%
AATTCTGGTCAACTAGGCCA+TGG - chr5.4:27502646-27502665 MS.gene99026:intron 45.0%
ACCATCTAAGCTGCAACTAC+GGG + chr5.4:27502356-27502375 None:intergenic 45.0%
AGACCGGCTAAGTCGTTATT+CGG - chr5.4:27504327-27504346 MS.gene99026:intron 45.0%
AGAGACAGAGAGAGTTGTTG+AGG + chr5.4:27501265-27501284 None:intergenic 45.0%
AGCATGGTCAACTAGGGTTA+GGG - chr5.4:27504765-27504784 MS.gene99026:CDS 45.0%
AGGGGAAATTCTGGTCAACT+AGG - chr5.4:27502640-27502659 MS.gene99026:intron 45.0%
AGGGGGAGGTTTATATGCTT+GGG - chr5.4:27504265-27504284 MS.gene99026:intron 45.0%
CGTTATCCTGACACATGTGT+CGG - chr5.4:27503665-27503684 MS.gene99026:intron 45.0%
CGTTATTCGGTACTTCCTTC+TGG - chr5.4:27504340-27504359 MS.gene99026:intron 45.0%
GAAGATCACTAAGCACTCCA+AGG + chr5.4:27504299-27504318 None:intergenic 45.0%
GATGGTTCCTTTGGTCAACT+TGG - chr5.4:27502908-27502927 MS.gene99026:intron 45.0%
GCTGGAACAGATGGTCAATT+AGG - chr5.4:27501211-27501230 MS.gene99026:CDS 45.0%
GGGTAATTACGACCCATACA+TGG + chr5.4:27502267-27502286 None:intergenic 45.0%
GTACCGAATAACGACTTAGC+CGG + chr5.4:27504333-27504352 None:intergenic 45.0%
TCACACGACCATAGATGAAG+TGG + chr5.4:27501861-27501880 None:intergenic 45.0%
TCTAGAAGTCCTAGCTCAAC+TGG - chr5.4:27501746-27501765 MS.gene99026:CDS 45.0%
TGGCAAATGCCGAAATTGCA+AGG - chr5.4:27501766-27501785 MS.gene99026:CDS 45.0%
TTCATAACCCATGTCTCTGC+TGG - chr5.4:27502724-27502743 MS.gene99026:intron 45.0%
! GTGGAGTACCACTTCATCTA+TGG - chr5.4:27501850-27501869 MS.gene99026:intron 45.0%
! TGATGGACATCTGTACACCT+GGG - chr5.4:27504040-27504059 MS.gene99026:intron 45.0%
! TTGATGGACATCTGTACACC+TGG - chr5.4:27504039-27504058 MS.gene99026:intron 45.0%
!! GGAAGGTATTATCATGGGGT+AGG - chr5.4:27502620-27502639 MS.gene99026:intron 45.0%
!!! AAAAAATAAAAATTCTTTTA+TGG - chr5.4:27502481-27502500 MS.gene99026:intron 5.0%
!!! AATAATTTTTTATTTTAGAA+GGG + chr5.4:27501610-27501629 None:intergenic 5.0%
!!! TAATAATTTTTTATTTTAGA+AGG + chr5.4:27501611-27501630 None:intergenic 5.0%
!!! TTTTTAACTTTAATATTAAA+AGG - chr5.4:27504423-27504442 MS.gene99026:intron 5.0%
AACCATCCCCACAAGTGAAC+AGG + chr5.4:27502895-27502914 None:intergenic 50.0%
ACGGTCACACAGTTGTGTCA+CGG - chr5.4:27503503-27503522 MS.gene99026:intron 50.0%
ACTTGTGGGGATGGTTCCTT+TGG - chr5.4:27502899-27502918 MS.gene99026:intron 50.0%
AGATTATGGAGTTGGGGTGC+TGG - chr5.4:27501193-27501212 MS.gene99026:CDS 50.0%
ATCTTGGTTCCATCAAGGCC+AGG + chr5.4:27504590-27504609 None:intergenic 50.0%
CAACTAGGGTTAGGGGATGA+TGG - chr5.4:27504773-27504792 MS.gene99026:CDS 50.0%
CAGATACCGACACATGTGTC+AGG + chr5.4:27503674-27503693 None:intergenic 50.0%
CATGTCATCGCCTTAACCTC+TGG - chr5.4:27501319-27501338 MS.gene99026:intron 50.0%
CATGTTGCACAGGTAGCATG+TGG - chr5.4:27502989-27503008 MS.gene99026:intron 50.0%
GAGCATGGTCAACTAGGGTT+AGG - chr5.4:27504764-27504783 MS.gene99026:CDS 50.0%
GAGCATTCTGTCCTTGTCAC+AGG - chr5.4:27504632-27504651 MS.gene99026:intron 50.0%
GAGGGGGAGGTTTATATGCT+TGG - chr5.4:27504264-27504283 MS.gene99026:intron 50.0%
GATCACTAAGCACTCCAAGG+TGG + chr5.4:27504296-27504315 None:intergenic 50.0%
GATGGACATCTGTACACCTG+GGG - chr5.4:27504041-27504060 MS.gene99026:intron 50.0%
GCATGGTCAACTAGGGTTAG+GGG - chr5.4:27504766-27504785 MS.gene99026:CDS 50.0%
GGGGAGGTTTATATGCTTGG+GGG - chr5.4:27504267-27504286 MS.gene99026:intron 50.0%
GGGGGAGGTTTATATGCTTG+GGG - chr5.4:27504266-27504285 MS.gene99026:intron 50.0%
GTCTGGTGTGCATCATGTGT+CGG - chr5.4:27503629-27503648 MS.gene99026:intron 50.0%
TAACCCATGTCTCTGCTGGT+TGG - chr5.4:27502728-27502747 MS.gene99026:intron 50.0%
TCATGGGGTAGGGGAAATTC+TGG - chr5.4:27502631-27502650 MS.gene99026:intron 50.0%
TCCCGTAGTTGCAGCTTAGA+TGG - chr5.4:27502352-27502371 MS.gene99026:intron 50.0%
TCCTTTGGTCAACTTGGGCA+TGG - chr5.4:27502914-27502933 MS.gene99026:intron 50.0%
TCTGGTAAGCGTGGTCAGTT+GGG - chr5.4:27503748-27503767 MS.gene99026:intron 50.0%
TCTGTCTCTTCACTTGCCTG+TGG - chr5.4:27501289-27501308 MS.gene99026:CDS 50.0%
TCTTGGTTCCATCAAGGCCA+GGG + chr5.4:27504589-27504608 None:intergenic 50.0%
TTTGTGTTTAGGTGAGGGGG+AGG - chr5.4:27504251-27504270 MS.gene99026:intron 50.0%
! AACCCATGTCTCTGCTGGTT+GGG - chr5.4:27502729-27502748 MS.gene99026:intron 50.0%
! ACCATGCCCAAGTTGACCAA+AGG + chr5.4:27502918-27502937 None:intergenic 50.0%
!!! GGCCACTCAGGTTTTGTTTC+AGG - chr5.4:27502751-27502770 MS.gene99026:intron 50.0%
ACACACAACTGTGAGGTCCC+GGG + chr5.4:27501817-27501836 None:intergenic 55.0%
ACCTGGGGAAGAGGCTTCAA+GGG - chr5.4:27504056-27504075 MS.gene99026:intron 55.0%
ACTGGGTGCCTGTTCACTTG+TGG - chr5.4:27502884-27502903 MS.gene99026:intron 55.0%
CACACACAACTGTGAGGTCC+CGG + chr5.4:27501818-27501837 None:intergenic 55.0%
CATCTGTACACCTGGGGAAG+AGG - chr5.4:27504047-27504066 MS.gene99026:intron 55.0%
CGGCATTTGCCAGTTGAGCT+AGG + chr5.4:27501758-27501777 None:intergenic 55.0%
CTACGGTGGACCACGTTGAT+AGG + chr5.4:27502291-27502310 None:intergenic 55.0%
CTCTGGTAAGCGTGGTCAGT+TGG - chr5.4:27503747-27503766 MS.gene99026:intron 55.0%
CTGGGTGCCTGTTCACTTGT+GGG - chr5.4:27502885-27502904 MS.gene99026:intron 55.0%
CTTGGTTCCATCAAGGCCAG+GGG + chr5.4:27504588-27504607 None:intergenic 55.0%
GACGTCCGGCCTTGCAATTT+CGG + chr5.4:27501778-27501797 None:intergenic 55.0%
GCTAACTTGGAGAAAGCCCC+TGG - chr5.4:27504569-27504588 MS.gene99026:intron 55.0%
GTCTCTTCACTTGCCTGTGG+CGG - chr5.4:27501292-27501311 MS.gene99026:CDS 55.0%
TGCCTGTTCACTTGTGGGGA+TGG - chr5.4:27502890-27502909 MS.gene99026:intron 55.0%
TGGGTGCCTGTTCACTTGTG+GGG - chr5.4:27502886-27502905 MS.gene99026:intron 55.0%
TGGTCAACTAGGCCATGGAG+AGG - chr5.4:27502651-27502670 MS.gene99026:intron 55.0%
! ACCCATGTCTCTGCTGGTTG+GGG - chr5.4:27502730-27502749 MS.gene99026:intron 55.0%
! GGTGGACCACGTTGATAGGT+GGG + chr5.4:27502287-27502306 None:intergenic 55.0%
!! AGTTGGGGTGCTGGAACAGA+TGG - chr5.4:27501202-27501221 MS.gene99026:CDS 55.0%
!! GGATTTGGCTCTGGTAAGCG+TGG - chr5.4:27503739-27503758 MS.gene99026:intron 55.0%
ATGCTTGGGGGCAACCACCT+TGG - chr5.4:27504279-27504298 MS.gene99026:intron 60.0%
CACCTGGGGAAGAGGCTTCA+AGG - chr5.4:27504055-27504074 MS.gene99026:intron 60.0%
GCCCCAACCAGCAGAGACAT+GGG + chr5.4:27502734-27502753 None:intergenic 60.0%
GGGGCGAGCATGGTCAACTA+GGG - chr5.4:27504759-27504778 MS.gene99026:CDS 60.0%
TCATGACCCGGGTTCGAACC+CGG - chr5.4:27501796-27501815 MS.gene99026:intron 60.0%
TGGGGCGAGCATGGTCAACT+AGG - chr5.4:27504758-27504777 MS.gene99026:CDS 60.0%
! CGGTGGACCACGTTGATAGG+TGG + chr5.4:27502288-27502307 None:intergenic 60.0%
!! GAGAAAGCCCCTGGCCTTGA+TGG - chr5.4:27504578-27504597 MS.gene99026:intron 60.0%
AAGGCCGGACGTCATGACCC+GGG - chr5.4:27501785-27501804 MS.gene99026:intron 65.0%
ACATGGGGATGGGGCGAGCA+TGG - chr5.4:27504749-27504768 MS.gene99026:CDS 65.0%
CAAGGCCGGACGTCATGACC+CGG - chr5.4:27501784-27501803 MS.gene99026:intron 65.0%
CATGACCCGGGTTCGAACCC+GGG - chr5.4:27501797-27501816 MS.gene99026:intron 65.0%
CGAACCCGGGTCATGACGTC+CGG + chr5.4:27501792-27501811 None:intergenic 65.0%
GCCCTTGAAGCCTCTTCCCC+AGG + chr5.4:27504060-27504079 None:intergenic 65.0%
GGCCCCAACCAGCAGAGACA+TGG + chr5.4:27502735-27502754 None:intergenic 65.0%
TGAGGTCCCGGGTTCGAACC+CGG + chr5.4:27501806-27501825 None:intergenic 65.0%
! GATGACATGAGCGCCGCCAC+AGG + chr5.4:27501308-27501327 None:intergenic 65.0%
! TCTGCTGGTTGGGGCCACTC+AGG - chr5.4:27502739-27502758 MS.gene99026:intron 65.0%
GAGGTCCCGGGTTCGAACCC+GGG + chr5.4:27501805-27501824 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 27501151 27504904 27501151 ID=MS.gene99026
chr5.4 mRNA 27501151 27504904 27501151 ID=MS.gene99026.t1;Parent=MS.gene99026
chr5.4 exon 27504715 27504904 27504715 ID=MS.gene99026.t1.exon1;Parent=MS.gene99026.t1
chr5.4 CDS 27504715 27504904 27504715 ID=cds.MS.gene99026.t1;Parent=MS.gene99026.t1
chr5.4 exon 27503283 27503438 27503283 ID=MS.gene99026.t1.exon2;Parent=MS.gene99026.t1
chr5.4 CDS 27503283 27503438 27503283 ID=cds.MS.gene99026.t1;Parent=MS.gene99026.t1
chr5.4 exon 27503015 27503173 27503015 ID=MS.gene99026.t1.exon3;Parent=MS.gene99026.t1
chr5.4 CDS 27503015 27503173 27503015 ID=cds.MS.gene99026.t1;Parent=MS.gene99026.t1
chr5.4 exon 27502172 27502339 27502172 ID=MS.gene99026.t1.exon4;Parent=MS.gene99026.t1
chr5.4 CDS 27502172 27502339 27502172 ID=cds.MS.gene99026.t1;Parent=MS.gene99026.t1
chr5.4 exon 27501885 27502016 27501885 ID=MS.gene99026.t1.exon5;Parent=MS.gene99026.t1
chr5.4 CDS 27501885 27502016 27501885 ID=cds.MS.gene99026.t1;Parent=MS.gene99026.t1
chr5.4 exon 27501707 27501793 27501707 ID=MS.gene99026.t1.exon6;Parent=MS.gene99026.t1
chr5.4 CDS 27501707 27501793 27501707 ID=cds.MS.gene99026.t1;Parent=MS.gene99026.t1
chr5.4 exon 27501402 27501497 27501402 ID=MS.gene99026.t1.exon7;Parent=MS.gene99026.t1
chr5.4 CDS 27501402 27501497 27501402 ID=cds.MS.gene99026.t1;Parent=MS.gene99026.t1
chr5.4 exon 27501151 27501323 27501151 ID=MS.gene99026.t1.exon8;Parent=MS.gene99026.t1
chr5.4 CDS 27501151 27501323 27501151 ID=cds.MS.gene99026.t1;Parent=MS.gene99026.t1
Gene Sequence

>MS.gene99026

ATGGAAGAAAGTGAACAAGTGAAAAGTGAAGAGAAAGAAGAAAGATTATGGAGTTGGGGTGCTGGAACAGATGGTCAATTAGGAACAGGCAGACTTCAAGATGAACAACTTCCTCAACAACTCTCTCTGTCTCTGCACTCTGTCTCTTCACTTGCCTGTGGCGGCGCTCATGTCATCGCCTTAACCTCTGGTTAGTACATTTCAATTATGTTGTACTATTTTATTATATATAATAGAATTTTGATTTTTTTTTTTGAAGGAATAGAATTTTGATTTTATTTCTCTAATATATCATATTACATGTGTAAAATATTTGTCTTTTATTAAATGAGAAACTCACATCTACCATTTGAGTTGTACTTAATTGTCAAAAAATAATATTAAATTGTACTTACCTGATTTTTTTTTTGACTGTTGGCTTTATTCTTTGAAATATAAATATAGTATTGCTTTTTTCCCTTCTAAAATAAAAAATTATTATACAGTAGACAAATAGAATATCTTTTACAAATCAAGAAAATTTTGTGGGATAAGTCATATATATTAACACAAATATTATTAAGTTCTATATATCTTAAAAATAACTTATGGATTGTCTAGAAGTCCTAGCTCAACTGGCAAATGCCGAAATTGCAAGGCCGGACGTCATGACCCGGGTTCGAACCCGGGACCTCACAGTTGTGTGTGAGTTTATTTTCAGTGGAGTACCACTTCATCTATGGTCGTGTGAGTTTATTTTCAGTGGAGTACCACTTCATCTAAGACCAAAAAAAAAAAACTTATGGATTAATGGTGAAGTATTTTGATAGGTGGTCCATTGTGGACTATTATTTGAAAATTGTTTGAAACTTCAATGACGGTTGACATTGTCAGCCTTCGAGAGTAGAGATTTAAGATGTGTCAAAACATTTAAGACAGTGACTTGATGGGTATAAGTTTGGCAAAAACAAGATAAAATAGATATGTTGACTTTAAAATTCAACTCATAATTGTTTTCTCGTTTTGTCAAATCGACACCGATCAACTCATTGTTTAAGTTGTGATGACCAATAGGACCATGAATTACTACTTCTAACATACGACTTTAGTCATCGTTAGTCTTTTGAACAATTTCCATGTATGGGTCGTAATTACCCACCTATCAACGTGGTCCACCGTAGAAATAACATAAAAATATAGTGATTTTGGAAAAAGTAATTTGTCCCGTAGTTGCAGCTTAGATGGTAAAAGTTGTGAGGGACTTTGATTTGCTAGAGTGCGGGTTCAAACCTGTAATACTCTACTTCACATTTAGTGTGCGTGAGTTTCGTCGCTAAGTTATTTGGAAGAAAAAAAATAAAAATTCTTTTATGGAAGTCAAAATCAGAATTTGCCCAATACAGAATATCAAAATGTTTTTAACTTATTTTTGTTAACTTTTTTCTTGATTCTCACTTTGTATATTCAAAACTATAAAAAAAATGCAGATGGGAAGGTATTATCATGGGGTAGGGGAAATTCTGGTCAACTAGGCCATGGAGAGGTTGTCAATAACATGTTGTATCCCAAGGCTATAACATCATTGGACAACTACTTCATAACCCATGTCTCTGCTGGTTGGGGCCACTCAGGTTTTGTTTCAGGTTTGCATCTTTGTCTCCAATATCTGCTTCTAAAATGAATAGTTGAGGTTAGTTTTTTTTGTTGAAAATTGATTACTTCTGTCTTTTCTTGTTCTTGTTTGGTTTCTAGATACTGGGTGCCTGTTCACTTGTGGGGATGGTTCCTTTGGTCAACTTGGGCATGGTGATTATGCTTCACATAGTTCACCCATCAAAGTGTCATCTTTTGTTGATCAACATGTTGCACAGGTAGCATGTGGAATGCGCCATTCTCTTGTCTTGTTGAAAGGTATTGGATTGATAAAAGTTAGTTCTCAGTTTGCTGAAGTTTCTGTTTCATTATTATGAATTTGAATTCAAGTTTTAAAATTACGGTTACACAGTTGTATCACGGTCTTTGATATTGTAAAAGCTTATGATAAAATATGTCAAATACAACTGCAATTGTGATCTCAAAGAGGTTGGTTATGTTATGTAGCACTTACACTTTAGATTGAGGTATGTCTGGTGTACGACATGCGCCAGTGTCCGACACTAACAATATACCAACACATGTATGTGGTCACATAGTACTAACATTCAATTCCGTCCACTTTCTTAAATTAACACATGTGTATCGTATCTAGTGTCTATGTCTGTATAAATACTCATAGGAGATAAGCAACCTTAATATCATAGTCACGAACGCGATTTCTCAGTTTGCTAAAGTTTGTGTTTCATTACTATGAATTTGAATTCAAGTTTTAAAACTACGGTCACACAGTTGTGTCACGGTCTTTGATATTGTAAAAGCTTATGATAAAATACATCAGATACAATTGTAATTGTTGTATCTAAGAGATCGACTATGTAGTACTAACACTTTAGATTGAGGCATGTCTGGTGTGCATCATGTGTCGGTATCTGACACTATCGTTATCCTGACACATGTGTCGGTATCTGACACTTTAGATTGATGATGCAGGCTGTCTTTCAAATCAAGTTTATGGATTTGGCTCTGGTAAGCGTGGTCAGTTGGGTGTCTCCAAAGATAAAATAAAATCTATTAATCTTCCTGAAGTTACTAGTGGATTTGAAGATGAGGAAATAGTTGGAATTTCTGCAAATGGAGATCATAGTGCTGCATTATCTGGTAAATCCATCACTTCTTACCTTGCATTATATGTGATTCACATTTCTCTTAATAAATAAGATAAATCAAGTCACCTGGATGTGAAATTCAAAAAAATTACATTATATTCTTTTCTAAAATATTCATTATCTCTCTATTGGTTGTTTTTGCATCAGTTGATGGACATCTGTACACCTGGGGAAGAGGCTTCAAGGGCTATGAAGATTCACACCTTCCACAATGCTTAAACTCTACGTCGAAATTTACTAAAGTCACTCTAGGGTGGAACCATGCTTTAGCTATGACTGGTATTTATTGACACTGCACCAAAGTTTCATGATTTCCTATCCTCTGTCACTTCCCTTTTGAATGAATTTTGTTTCTTAAATTTGTGTTTAGGTGAGGGGGAGGTTTATATGCTTGGGGGCAACCACCTTGGAGTGCTTAGTGATCTTCACAATGCAAGACCGGCTAAGTCGTTATTCGGTACTTCCTTCTGGACTTAATTGTAAACAAAAGTATTTTCACACATTAAGAACACTAATCGAATGCATTTAATATTTTTAACTTTAATATTAAAAGGAAATACATTAATTATAATGGCCACCCCTTAAAAAATTTCTGCTGTCACCACAAATGTTTCGGAGTTTCATATTACTAGATAAGACTTTTCTAACTTATTTATCACGTAATAGATTCAAGAGAAGCTAACTTGGAGAAAGCCCCTGGCCTTGATGGAACCAAGATTACTGATATTGCTACTGGAGCTGAGCATTCTGTCCTTGTCACAGGCAAGATATAGTTTTCTTATACGTAGGTAAGTTTATAATCACATTAGCATGCTAACTTATTTCTTTCTCAATATTCAGAGAATGGAGAAATAAAGACATGGGGATGGGGCGAGCATGGTCAACTAGGGTTAGGGGATGATGGTGACCGAATCAGTCCTGTTACTGTAAATCTTGGTTATGATCTGAATGAGGCTGCATCAATCAGAGTTTATTGTGGAAGTGGTTTTACATTTGCTTTAACAAAGCCATAA
Protein sequence

>MS.gene99026.t1

MEESEQVKSEEKEERLWSWGAGTDGQLGTGRLQDEQLPQQLSLSLHSVSSLACGGAHVIALTSDGKVLSWGRGNSGQLGHGEVVNNMLYPKAITSLDNYFITHVSAGWGHSGFVSDTGCLFTCGDGSFGQLGHGDYASHSSPIKVSSFVDQHVAQVACGMRHSLVLLKGCLSNQVYGFGSGKRGQLGVSKDKIKSINLPEVTSGFEDEEIVGISANGDHSAALSVDGHLYTWGRGFKGYEDSHLPQCLNSTSKFTKVTLGWNHALAMTGEGEVYMLGGNHLGVLSDLHNARPAKSLFDSREANLEKAPGLDGTKITDIATGAEHSVLVTENGEIKTWGWGEHGQLGLGDDGDRISPVTVNLGYDLNEAASIRVYCGSGFTFALTKP