AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032779

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032779.t1 MTR_5g038220 93.573 389 19 2 196 581 1 386 0.0 721
MS.gene032779.t1 MTR_5g038225 98.378 185 3 0 1 185 1 185 6.96e-130 378
MS.gene032779.t1 MTR_5g038225 98.649 148 2 0 1 148 1 148 4.04e-102 306
MS.gene032779.t1 MTR_5g089900 32.718 379 211 14 226 578 306 666 3.02e-38 151
MS.gene032779.t1 MTR_5g089900 28.723 282 178 6 214 475 346 624 1.84e-24 108
MS.gene032779.t1 MTR_3g096780 29.855 345 209 11 249 580 20 344 5.84e-38 145
MS.gene032779.t1 MTR_3g096780 30.027 373 217 13 216 571 38 383 7.26e-35 137
MS.gene032779.t1 MTR_3g096780 35.379 277 161 8 209 475 84 352 7.85e-35 137
MS.gene032779.t1 MTR_3g096780 36.316 190 115 4 214 403 193 376 8.67e-29 119
MS.gene032779.t1 MTR_3g096780 32.389 247 129 10 349 579 15 239 7.68e-21 95.9
MS.gene032779.t1 MTR_8g094410 30.595 353 216 12 216 555 36 372 2.71e-36 141
MS.gene032779.t1 MTR_8g094410 29.412 323 198 9 249 558 18 323 1.33e-34 136
MS.gene032779.t1 MTR_8g094410 32.794 247 152 6 211 450 136 375 1.11e-33 134
MS.gene032779.t1 MTR_8g094410 31.673 281 176 7 204 475 77 350 1.07e-29 122
MS.gene032779.t1 MTR_8g094410 31.429 245 132 10 350 579 14 237 1.25e-21 98.2
MS.gene032779.t1 MTR_8g094410 30.595 353 216 12 216 555 36 372 8.37e-36 139
MS.gene032779.t1 MTR_8g094410 29.412 323 198 9 249 558 18 323 5.52e-34 134
MS.gene032779.t1 MTR_8g094410 32.794 247 152 6 211 450 136 375 2.54e-33 132
MS.gene032779.t1 MTR_8g094410 31.673 281 176 7 204 475 77 350 1.54e-29 121
MS.gene032779.t1 MTR_8g094410 31.429 245 132 10 350 579 14 237 2.97e-21 96.7
MS.gene032779.t1 MTR_8g094410 33.068 251 146 7 211 450 2 241 3.90e-35 135
MS.gene032779.t1 MTR_8g094410 27.490 251 152 10 318 555 5 238 9.11e-19 87.8
MS.gene032779.t1 MTR_8g094410 28.500 200 118 6 369 556 1 187 8.37e-16 79.0
MS.gene032779.t1 MTR_8g094410 33.061 245 142 7 217 450 93 326 8.35e-33 130
MS.gene032779.t1 MTR_8g094410 29.012 324 195 13 249 555 18 323 4.82e-29 119
MS.gene032779.t1 MTR_8g094410 32.234 273 165 8 216 475 36 301 2.30e-27 114
MS.gene032779.t1 MTR_8g094410 34.211 190 119 3 214 403 142 325 1.35e-24 106
MS.gene032779.t1 MTR_8g094410 29.779 272 157 8 302 556 18 272 6.71e-24 104
MS.gene032779.t1 MTR_8g094410 29.279 222 123 8 350 554 14 218 1.45e-15 79.3
MS.gene032779.t1 MTR_8g094410 32.780 241 148 6 217 450 93 326 2.46e-32 128
MS.gene032779.t1 MTR_8g094410 29.193 322 197 12 249 555 18 323 1.78e-28 117
MS.gene032779.t1 MTR_8g094410 32.234 273 165 8 216 475 36 301 7.59e-27 112
MS.gene032779.t1 MTR_8g094410 29.391 279 178 7 126 403 65 325 2.85e-24 105
MS.gene032779.t1 MTR_8g094410 29.779 272 157 8 302 556 18 272 1.67e-23 102
MS.gene032779.t1 MTR_8g094410 29.148 223 124 8 350 555 14 219 3.24e-15 77.8
MS.gene032779.t1 MTR_1g099220 27.441 379 203 9 214 578 300 620 3.11e-31 130
MS.gene032779.t1 MTR_1g099220 28.659 164 112 3 213 375 469 628 5.36e-12 69.3
MS.gene032779.t1 MTR_6g034795 27.604 384 196 10 214 578 297 617 2.45e-29 124
MS.gene032779.t1 MTR_6g034795 27.545 167 110 5 213 375 466 625 2.75e-11 67.0
MS.gene032779.t1 MTR_1g042800 28.535 396 232 17 214 578 227 602 4.17e-29 123
MS.gene032779.t1 MTR_1g042800 26.238 202 138 5 195 390 433 629 7.81e-13 72.0
MS.gene032779.t1 MTR_7g072410 28.827 392 233 16 214 578 232 604 4.91e-28 120
MS.gene032779.t1 MTR_7g072410 28.125 192 127 5 210 395 450 636 9.14e-13 72.0
MS.gene032779.t1 MTR_7g063440 30.952 252 139 5 244 465 139 385 1.11e-27 115
MS.gene032779.t1 MTR_7g063440 28.631 241 123 8 351 556 141 367 2.71e-17 84.7
MS.gene032779.t1 MTR_8g094410 33.491 212 120 6 249 450 2 202 2.03e-27 112
MS.gene032779.t1 MTR_8g094410 34.211 190 119 3 214 403 18 201 1.30e-25 107
MS.gene032779.t1 MTR_8g094410 28.372 215 124 10 354 555 2 199 8.11e-16 78.6
MS.gene032779.t1 MTR_8g094410 29.114 158 89 5 411 556 2 148 1.60e-11 65.5
MS.gene032779.t1 MTR_7g063440 30.952 252 139 5 244 465 231 477 4.21e-27 115
MS.gene032779.t1 MTR_7g063440 28.631 241 123 8 351 556 233 459 5.09e-17 84.3
MS.gene032779.t1 MTR_4g029410 29.477 363 214 11 240 578 62 406 4.84e-27 117
MS.gene032779.t1 MTR_4g029410 27.055 292 189 9 211 482 84 371 8.59e-21 97.4
MS.gene032779.t1 MTR_4g029410 30.000 180 113 4 213 388 255 425 6.08e-15 79.0
MS.gene032779.t1 MTR_3g064560 27.704 379 201 11 214 578 325 644 5.69e-27 117
MS.gene032779.t1 MTR_3g064560 24.766 214 99 4 213 364 431 644 1.71e-11 67.8
MS.gene032779.t1 MTR_0024s0070 27.638 398 236 14 216 580 7 385 4.10e-25 108
MS.gene032779.t1 MTR_0024s0070 25.982 331 211 10 266 580 6 318 5.61e-22 99.0
MS.gene032779.t1 MTR_0024s0070 34.706 170 94 4 214 366 216 385 1.49e-18 88.6
MS.gene032779.t1 MTR_3g097060 28.101 395 233 13 217 578 40 416 1.11e-24 107
MS.gene032779.t1 MTR_3g097060 30.901 233 141 7 213 433 140 364 2.09e-20 94.4
MS.gene032779.t1 MTR_0095s0070 31.276 243 152 8 216 450 32 267 1.32e-22 98.2
MS.gene032779.t1 MTR_0095s0070 37.931 145 87 3 211 354 132 274 3.07e-22 97.4
MS.gene032779.t1 MTR_0095s0070 32.524 206 131 5 204 408 73 271 3.77e-21 94.0
MS.gene032779.t1 MTR_0095s0070 28.571 245 150 6 322 555 34 264 5.66e-19 87.8
MS.gene032779.t1 MTR_0095s0070 31.250 224 121 9 371 579 28 233 6.52e-19 87.4
MS.gene032779.t1 MTR_7g086050 26.962 293 187 9 201 472 142 428 3.36e-22 102
MS.gene032779.t1 MTR_7g086050 29.956 227 135 9 266 475 156 375 9.65e-17 84.7
MS.gene032779.t1 MTR_7g086050 25.194 258 170 5 214 465 266 506 2.69e-13 73.6
MS.gene032779.t1 MTR_3g097060 27.647 340 210 11 217 535 40 364 1.25e-20 94.7
MS.gene032779.t1 MTR_3g097060 30.901 233 141 7 213 433 140 364 1.44e-20 94.4
MS.gene032779.t1 MTR_3g097060 25.816 337 209 10 265 579 37 354 4.36e-17 84.0
MS.gene032779.t1 MTR_2g079610 27.035 344 225 9 214 541 131 464 2.21e-20 95.1
MS.gene032779.t1 MTR_7g063440 30.198 202 113 3 244 422 231 427 3.09e-20 94.0
MS.gene032779.t1 MTR_7g063440 31.638 177 95 3 213 364 251 426 1.06e-15 80.1
MS.gene032779.t1 MTR_3g069030 27.778 252 145 7 244 465 215 459 3.05e-19 91.3
MS.gene032779.t1 MTR_3g069030 26.515 396 222 15 213 557 65 442 5.77e-19 90.5
MS.gene032779.t1 MTR_3g113250 25.000 376 228 13 234 579 49 400 3.42e-18 88.6
MS.gene032779.t1 MTR_7g016640 26.975 367 214 14 214 539 23 376 3.69e-17 84.3
MS.gene032779.t1 MTR_7g016640 30.636 173 92 5 210 366 140 300 2.68e-12 69.3
MS.gene032779.t1 MTR_7g016640 26.975 367 214 14 214 539 23 376 6.84e-17 84.0
MS.gene032779.t1 MTR_7g016640 27.654 358 196 14 213 539 143 468 5.29e-13 72.0
MS.gene032779.t1 MTR_3g086300 24.202 376 244 13 214 557 167 533 7.42e-17 84.3
MS.gene032779.t1 MTR_3g086300 26.623 308 194 9 252 541 154 447 1.20e-13 73.9
MS.gene032779.t1 MTR_3g109650 27.778 234 134 10 205 408 119 347 1.04e-13 73.9
MS.gene032779.t1 MTR_3g109650 27.778 234 134 10 205 408 217 445 1.43e-13 73.9
MS.gene032779.t1 MTR_3g109650 24.694 409 227 17 214 554 36 431 4.40e-12 69.3
MS.gene032779.t1 MTR_1g006695 24.173 393 241 15 213 554 32 418 2.97e-12 69.3
MS.gene032779.t1 MTR_1g006695 30.739 257 144 11 351 579 14 264 4.49e-12 68.9
MS.gene032779.t1 MTR_7g451760 32.716 162 100 4 211 364 112 272 1.22e-11 65.9
MS.gene032779.t1 MTR_7g047560 32.716 162 100 4 211 364 112 272 1.22e-11 65.9
MS.gene032779.t1 MTR_5g020630 25.000 376 218 13 210 555 78 419 1.48e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032779.t1 AT1G27060 59.278 388 140 6 199 580 2 377 5.80e-147 429
MS.gene032779.t1 AT1G27050 51.220 205 80 4 1 185 1 205 8.61e-56 187
MS.gene032779.t1 AT5G12350 33.871 372 203 14 232 578 295 648 1.13e-41 162
MS.gene032779.t1 AT5G12350 27.972 286 186 5 215 482 330 613 5.65e-27 117
MS.gene032779.t1 AT5G12350 30.822 146 99 2 213 357 497 641 1.24e-13 74.7
MS.gene032779.t1 AT5G19420 33.065 372 206 12 232 578 333 686 1.17e-41 162
MS.gene032779.t1 AT5G19420 27.273 286 188 5 215 482 368 651 3.11e-26 114
MS.gene032779.t1 AT5G19420 30.137 146 100 2 213 357 535 679 6.96e-13 72.4
MS.gene032779.t1 AT5G19420 33.065 372 206 12 232 578 299 652 1.30e-41 161
MS.gene032779.t1 AT5G19420 27.273 286 188 5 215 482 334 617 3.22e-26 114
MS.gene032779.t1 AT5G19420 30.137 146 100 2 213 357 501 645 7.19e-13 72.4
MS.gene032779.t1 AT5G19420 33.065 372 206 12 232 578 299 652 2.93e-41 160
MS.gene032779.t1 AT5G19420 27.273 286 188 5 215 482 334 617 7.26e-26 113
MS.gene032779.t1 AT5G19420 30.137 146 100 2 213 357 501 645 1.49e-12 71.2
MS.gene032779.t1 AT5G63860 30.814 344 208 11 249 580 20 345 2.01e-38 147
MS.gene032779.t1 AT5G63860 30.704 355 212 11 216 554 38 374 3.87e-35 138
MS.gene032779.t1 AT5G63860 33.333 276 169 6 209 475 84 353 3.39e-33 132
MS.gene032779.t1 AT5G63860 33.491 212 129 5 214 424 193 393 4.65e-28 117
MS.gene032779.t1 AT5G42140 30.789 380 189 12 214 578 298 618 1.64e-33 137
MS.gene032779.t1 AT5G42140 27.103 321 161 10 272 579 255 515 1.91e-13 74.3
MS.gene032779.t1 AT5G42140 28.049 164 113 3 213 375 467 626 1.30e-11 68.2
MS.gene032779.t1 AT5G42140 30.789 380 189 12 214 578 298 618 1.64e-33 137
MS.gene032779.t1 AT5G42140 27.103 321 161 10 272 579 255 515 1.91e-13 74.3
MS.gene032779.t1 AT5G42140 28.049 164 113 3 213 375 467 626 1.30e-11 68.2
MS.gene032779.t1 AT3G23270 31.714 391 223 16 214 578 219 591 7.85e-33 135
MS.gene032779.t1 AT3G23270 28.042 189 131 4 210 395 437 623 6.13e-14 75.9
MS.gene032779.t1 AT3G23270 31.714 391 223 16 214 578 223 595 9.22e-33 134
MS.gene032779.t1 AT3G23270 28.042 189 131 4 210 395 441 627 6.94e-14 75.5
MS.gene032779.t1 AT4G14368 30.179 391 229 14 214 578 231 603 7.22e-32 132
MS.gene032779.t1 AT4G14368 28.723 188 131 3 210 395 449 635 8.06e-14 75.5
MS.gene032779.t1 AT4G14368 30.691 391 227 15 214 578 238 610 7.72e-32 132
MS.gene032779.t1 AT4G14368 28.723 188 131 3 210 395 456 642 8.80e-14 75.1
MS.gene032779.t1 AT4G14368 30.691 391 227 15 214 578 236 608 7.99e-32 132
MS.gene032779.t1 AT4G14368 28.723 188 131 3 210 395 454 640 8.21e-14 75.5
MS.gene032779.t1 AT4G14368 30.946 391 226 16 214 578 238 610 1.40e-31 131
MS.gene032779.t1 AT4G14368 28.723 188 131 3 210 395 456 642 1.51e-13 74.3
MS.gene032779.t1 AT1G69710 31.250 384 184 13 214 578 321 643 6.62e-30 125
MS.gene032779.t1 AT1G69710 26.163 172 123 3 195 364 474 643 6.74e-12 69.3
MS.gene032779.t1 AT1G69710 31.250 384 184 13 214 578 308 630 7.65e-30 125
MS.gene032779.t1 AT1G69710 26.163 172 123 3 195 364 461 630 6.71e-12 69.3
MS.gene032779.t1 AT1G65920 30.077 389 223 16 217 578 264 630 1.78e-29 124
MS.gene032779.t1 AT1G65920 25.664 226 99 5 213 373 415 636 1.11e-11 68.6
MS.gene032779.t1 AT1G65920 30.077 389 223 16 217 578 218 584 2.18e-29 124
MS.gene032779.t1 AT1G65920 25.664 226 99 5 213 373 369 590 1.28e-11 68.2
MS.gene032779.t1 AT3G47660 29.104 402 220 18 214 578 258 631 1.53e-28 121
MS.gene032779.t1 AT3G47660 27.857 280 190 5 213 482 319 596 3.06e-24 108
MS.gene032779.t1 AT3G47660 27.434 226 105 6 210 380 423 644 1.22e-13 74.7
MS.gene032779.t1 AT3G47660 29.104 402 220 18 214 578 255 628 1.67e-28 121
MS.gene032779.t1 AT3G47660 27.857 280 190 5 213 482 316 593 3.22e-24 108
MS.gene032779.t1 AT3G47660 27.434 226 105 6 210 380 420 641 1.32e-13 74.7
MS.gene032779.t1 AT3G47660 29.104 402 220 18 214 578 255 628 1.67e-28 121
MS.gene032779.t1 AT3G47660 27.857 280 190 5 213 482 316 593 3.22e-24 108
MS.gene032779.t1 AT3G47660 27.434 226 105 6 210 380 420 641 1.32e-13 74.7
MS.gene032779.t1 AT3G47660 29.104 402 220 18 214 578 258 631 1.69e-28 121
MS.gene032779.t1 AT3G47660 27.857 280 190 5 213 482 319 596 3.35e-24 108
MS.gene032779.t1 AT3G47660 27.434 226 105 6 210 380 423 644 1.32e-13 74.7
MS.gene032779.t1 AT3G47660 29.126 412 227 18 204 578 284 667 2.48e-28 121
MS.gene032779.t1 AT3G47660 27.434 226 105 6 210 380 459 680 1.88e-13 74.3
MS.gene032779.t1 AT1G76950 28.800 375 221 15 232 578 268 624 2.56e-28 121
MS.gene032779.t1 AT1G76950 30.175 285 172 10 214 475 302 582 2.79e-24 108
MS.gene032779.t1 AT1G76950 29.091 165 110 4 213 375 473 632 1.23e-12 71.6
MS.gene032779.t1 AT3G47660 29.104 402 220 18 214 578 113 486 4.25e-28 120
MS.gene032779.t1 AT3G47660 27.839 273 185 5 213 475 174 444 7.51e-24 107
MS.gene032779.t1 AT3G47660 27.434 226 105 6 210 380 278 499 2.91e-13 73.6
MS.gene032779.t1 AT3G47660 29.126 412 227 18 204 578 170 553 4.70e-28 120
MS.gene032779.t1 AT3G47660 27.434 226 105 6 210 380 345 566 3.39e-13 73.2
MS.gene032779.t1 AT5G16040 30.172 348 204 13 216 543 9 337 1.21e-27 115
MS.gene032779.t1 AT5G16040 28.996 269 162 6 186 436 75 332 6.44e-25 107
MS.gene032779.t1 AT5G16040 28.487 337 208 11 259 580 1 319 1.90e-24 106
MS.gene032779.t1 AT5G16040 32.164 171 98 4 214 366 217 387 9.06e-18 86.3
MS.gene032779.t1 AT5G08710 27.250 400 247 12 209 578 45 430 3.17e-27 115
MS.gene032779.t1 AT5G08710 25.664 339 207 11 265 579 51 368 2.86e-15 79.0
MS.gene032779.t1 AT3G02510 29.958 237 146 5 209 436 49 274 1.84e-25 108
MS.gene032779.t1 AT3G02510 27.465 284 176 11 214 478 1 273 7.87e-20 91.7
MS.gene032779.t1 AT3G02510 26.398 322 168 10 266 580 2 261 1.43e-19 90.9
MS.gene032779.t1 AT3G02510 32.386 176 101 5 209 366 154 329 2.11e-16 81.3
MS.gene032779.t1 AT3G02510 28.448 348 210 12 216 543 9 337 3.67e-25 108
MS.gene032779.t1 AT3G02510 30.472 233 142 5 213 436 111 332 5.91e-25 107
MS.gene032779.t1 AT3G02510 27.879 330 205 12 266 580 8 319 2.43e-24 105
MS.gene032779.t1 AT3G02510 32.386 176 101 5 209 366 212 387 4.45e-16 80.9
MS.gene032779.t1 AT3G53830 30.741 270 140 9 236 465 205 467 4.44e-23 103
MS.gene032779.t1 AT3G53830 28.058 278 147 9 320 557 186 450 1.97e-18 89.0
MS.gene032779.t1 AT3G53830 30.741 270 140 9 236 465 233 495 4.71e-23 103
MS.gene032779.t1 AT3G53830 28.058 278 147 9 320 557 214 478 2.32e-18 89.0
MS.gene032779.t1 AT5G16040 28.435 313 194 10 259 556 1 298 4.82e-23 101
MS.gene032779.t1 AT5G16040 29.392 296 180 10 216 494 9 292 2.93e-22 99.0
MS.gene032779.t1 AT5G16040 26.172 256 160 6 186 423 75 319 1.40e-17 84.7
MS.gene032779.t1 AT3G03790 26.408 284 186 8 208 472 146 425 2.84e-22 102
MS.gene032779.t1 AT3G03790 29.766 299 167 12 254 528 141 420 1.49e-19 93.6
MS.gene032779.t1 AT3G03790 30.921 304 173 12 214 494 204 493 1.10e-17 87.8
MS.gene032779.t1 AT3G03790 26.117 291 192 8 201 472 142 428 4.73e-22 101
MS.gene032779.t1 AT3G03790 29.758 289 160 12 264 528 154 423 1.54e-18 90.5
MS.gene032779.t1 AT3G03790 30.921 304 173 12 214 494 207 496 1.23e-17 87.4
MS.gene032779.t1 AT3G03790 26.117 291 192 8 201 472 142 428 5.21e-22 101
MS.gene032779.t1 AT3G03790 29.758 289 160 12 264 528 154 423 1.65e-18 90.5
MS.gene032779.t1 AT3G03790 30.921 304 173 12 214 494 207 496 1.47e-17 87.4
MS.gene032779.t1 AT3G02510 27.451 306 192 11 266 556 8 298 5.78e-22 97.4
MS.gene032779.t1 AT3G02510 27.703 296 185 9 216 494 9 292 3.09e-21 95.1
MS.gene032779.t1 AT3G02510 28.365 208 129 5 213 411 111 307 1.07e-17 84.7
MS.gene032779.t1 AT3G55580 29.588 267 145 9 235 465 224 483 9.90e-22 99.0
MS.gene032779.t1 AT3G55580 27.143 280 148 10 340 581 225 486 1.47e-17 86.3
MS.gene032779.t1 AT5G08710 28.621 290 188 7 209 482 45 331 3.32e-21 95.5
MS.gene032779.t1 AT5G08710 25.581 301 181 10 265 541 51 332 2.49e-14 75.1
MS.gene032779.t1 AT5G60870 27.206 408 216 16 213 568 49 427 3.55e-19 90.9
MS.gene032779.t1 AT5G60870 26.506 332 209 13 214 524 121 438 7.38e-16 80.5
MS.gene032779.t1 AT5G60870 31.902 163 102 4 211 365 280 441 1.02e-14 77.0
MS.gene032779.t1 AT5G60870 26.289 194 130 4 235 421 253 440 7.29e-14 74.3
MS.gene032779.t1 AT1G19880 25.967 362 215 12 251 579 65 406 5.00e-19 90.9
MS.gene032779.t1 AT3G15430 31.492 181 108 5 214 385 290 463 2.36e-18 88.6
MS.gene032779.t1 AT3G15430 25.253 396 251 17 189 556 100 478 3.68e-18 88.2
MS.gene032779.t1 AT3G15430 26.190 294 187 11 301 580 115 392 5.53e-13 72.0
MS.gene032779.t1 AT3G15430 31.492 181 108 5 214 385 290 463 2.36e-18 88.6
MS.gene032779.t1 AT3G15430 25.253 396 251 17 189 556 100 478 3.68e-18 88.2
MS.gene032779.t1 AT3G15430 26.190 294 187 11 301 580 115 392 5.53e-13 72.0
MS.gene032779.t1 AT3G15430 31.492 181 108 5 214 385 290 463 2.36e-18 88.6
MS.gene032779.t1 AT3G15430 25.253 396 251 17 189 556 100 478 3.68e-18 88.2
MS.gene032779.t1 AT3G15430 26.190 294 187 11 301 580 115 392 5.53e-13 72.0
MS.gene032779.t1 AT3G15430 31.492 181 108 5 214 385 290 463 2.36e-18 88.6
MS.gene032779.t1 AT3G15430 25.253 396 251 17 189 556 100 478 3.68e-18 88.2
MS.gene032779.t1 AT3G15430 26.190 294 187 11 301 580 115 392 5.53e-13 72.0
MS.gene032779.t1 AT3G15430 31.492 181 108 5 214 385 290 463 2.36e-18 88.6
MS.gene032779.t1 AT3G15430 25.253 396 251 17 189 556 100 478 3.68e-18 88.2
MS.gene032779.t1 AT3G15430 26.190 294 187 11 301 580 115 392 5.53e-13 72.0
MS.gene032779.t1 AT3G15430 31.492 181 108 5 214 385 290 463 2.36e-18 88.6
MS.gene032779.t1 AT3G15430 25.253 396 251 17 189 556 100 478 3.68e-18 88.2
MS.gene032779.t1 AT3G15430 26.190 294 187 11 301 580 115 392 5.53e-13 72.0
MS.gene032779.t1 AT5G60870 26.747 415 216 16 213 568 49 434 3.37e-18 87.8
MS.gene032779.t1 AT5G60870 26.254 339 208 14 214 524 121 445 1.47e-14 76.6
MS.gene032779.t1 AT5G60870 32.164 171 98 6 211 365 280 448 2.19e-13 73.2
MS.gene032779.t1 AT5G60870 26.263 198 132 5 235 421 253 447 3.00e-12 69.3
MS.gene032779.t1 AT3G53830 31.222 221 112 7 236 423 205 418 3.96e-18 87.4
MS.gene032779.t1 AT3G53830 31.222 221 112 7 236 423 233 446 4.41e-18 87.4
MS.gene032779.t1 AT5G60870 29.560 318 165 10 264 541 49 347 5.81e-18 86.7
MS.gene032779.t1 AT5G60870 27.019 359 185 14 213 523 49 378 6.27e-16 80.5
MS.gene032779.t1 AT3G02300 27.520 367 212 15 214 539 33 386 1.28e-16 83.2
MS.gene032779.t1 AT3G02300 25.240 313 177 9 257 532 25 317 7.83e-14 74.7
MS.gene032779.t1 AT3G02300 31.429 175 95 5 210 369 150 314 1.24e-13 73.9
MS.gene032779.t1 AT3G02300 27.520 367 212 15 214 539 22 375 1.55e-16 82.8
MS.gene032779.t1 AT3G02300 25.240 313 177 9 257 532 14 306 9.17e-14 74.3
MS.gene032779.t1 AT3G02300 31.429 175 95 5 210 369 139 303 1.41e-13 73.6
MS.gene032779.t1 AT3G26100 25.521 384 237 14 210 557 160 530 3.98e-16 82.0
MS.gene032779.t1 AT3G26100 27.168 346 204 14 247 562 146 473 1.32e-15 80.5
MS.gene032779.t1 AT3G26100 25.521 384 237 14 210 557 160 530 3.98e-16 82.0
MS.gene032779.t1 AT3G26100 27.168 346 204 14 247 562 146 473 1.32e-15 80.5
MS.gene032779.t1 AT3G26100 25.521 384 237 14 210 557 160 530 3.98e-16 82.0
MS.gene032779.t1 AT3G26100 27.168 346 204 14 247 562 146 473 1.32e-15 80.5
MS.gene032779.t1 AT5G48330 24.500 400 225 11 216 554 48 431 9.05e-16 80.5
MS.gene032779.t1 AT5G48330 24.439 401 225 11 216 554 48 432 1.22e-15 80.1
MS.gene032779.t1 AT5G48330 23.203 306 175 10 214 468 159 455 8.63e-12 68.2
MS.gene032779.t1 AT3G26100 25.521 384 237 14 210 557 60 430 1.57e-15 79.7
MS.gene032779.t1 AT3G26100 27.168 346 204 14 247 562 46 373 5.84e-15 77.8
MS.gene032779.t1 AT3G26100 25.521 384 237 14 210 557 60 430 1.57e-15 79.7
MS.gene032779.t1 AT3G26100 27.168 346 204 14 247 562 46 373 5.84e-15 77.8
MS.gene032779.t1 AT3G26100 25.521 384 237 14 210 557 60 430 1.57e-15 79.7
MS.gene032779.t1 AT3G26100 27.168 346 204 14 247 562 46 373 5.84e-15 77.8
MS.gene032779.t1 AT5G60870 31.902 163 102 4 211 365 111 272 1.76e-15 77.4
MS.gene032779.t1 AT5G60870 28.959 221 144 6 218 431 8 222 1.01e-14 75.1
MS.gene032779.t1 AT5G60870 26.289 194 130 4 235 421 84 271 1.53e-14 74.7
MS.gene032779.t1 AT5G11580 25.307 407 225 18 214 554 37 430 2.27e-14 76.6
MS.gene032779.t1 AT5G11580 30.964 197 103 10 214 385 78 266 4.64e-13 71.6

Find 188 sgRNAs with CRISPR-Local

Find 439 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCTTTCAAATCAAGTTTA+TGG 0.192149 5.2:-28322386 MS.gene032779:CDS
AAGAATCAGAAGAAAGATTA+TGG 0.240826 5.2:-28324713 MS.gene032779:CDS
TCAAATCAAGTTTATGGATT+TGG 0.242600 5.2:-28322380 MS.gene032779:CDS
GCCAGGGGCTTTCTCCAAAT+TGG 0.246193 5.2:+28321529 None:intergenic
AGTCACTGTTAATTCTAAAA+AGG 0.259258 5.2:-28327322 MS.gene032779:intron
TCAAATCCACTAGTAACTTT+AGG 0.281051 5.2:+28322299 None:intergenic
AACCCATGTCTCTGCTGGTT+GGG 0.284730 5.2:-28322843 MS.gene032779:CDS
AGATTCAAGAGAAGCCAATT+TGG 0.285742 5.2:-28321543 MS.gene032779:CDS
AGAACCATCCTCACTACTTT+TGG 0.314036 5.2:+28326311 None:intergenic
TTGGTGGGTTTATCTTCTTC+AGG 0.326284 5.2:+28327543 None:intergenic
AAGGGGAGGTTTATATGCTT+GGG 0.328406 5.2:-28321840 MS.gene032779:CDS
AATAGACTTGCTTCAGCTAT+AGG 0.331871 5.2:-28326339 MS.gene032779:CDS
GAGAAAGCCCCTGGCCTTGA+TGG 0.334905 5.2:-28321521 MS.gene032779:CDS
GGCGGCGTCTGCCGAGTCTT+TGG 0.336175 5.2:+28327374 None:intergenic
AGAAAGTGAAAGTAGATTGA+TGG 0.343057 5.2:-28324769 MS.gene032779:CDS
TCTTCAGGCGGCGGTGGAAG+TGG 0.354636 5.2:+28327558 None:intergenic
TAATCAAGATTTACAGTAAC+AGG 0.357491 5.2:+28321290 None:intergenic
AGAAATAAAGACATGGGGTT+GGG 0.360728 5.2:-28321360 MS.gene032779:CDS
TGCTTGTTCACTTGTGGGGA+TGG 0.362302 5.2:-28322683 MS.gene032779:CDS
GATCATAGTGCTGCATTATC+TGG 0.362532 5.2:-28322242 MS.gene032779:intron
ACTTGTGGGGATGGTTCCTT+TGG 0.367581 5.2:-28322674 MS.gene032779:CDS
TCATGGGGTAGGGGAAATTC+TGG 0.369753 5.2:-28322941 MS.gene032779:CDS
AGAAGAAAGATTATGGAGTT+GGG 0.376583 5.2:-28324706 MS.gene032779:CDS
GCCGTCTGCGGTGGTCATCA+TGG 0.379613 5.2:-28327508 MS.gene032779:CDS
GCCGGTCATGATCCTTCGTT+TGG 0.380757 5.2:-28327345 MS.gene032779:CDS
GATGGTTCCTTTGGTCAACT+TGG 0.383105 5.2:-28322665 MS.gene032779:CDS
TTTGAAGATGAGGAAATAGT+TGG 0.385379 5.2:-28322281 MS.gene032779:CDS
GCTGGAACAGATGGTCAATT+AGG 0.391068 5.2:-28324681 MS.gene032779:CDS
CGGCGGTGTTGGGCGCTTGG+TGG 0.391462 5.2:+28327527 None:intergenic
TCCAATGATGTTATAGCCTT+GGG 0.391517 5.2:+28322878 None:intergenic
CTGGGTGCTTGTTCACTTGT+GGG 0.394199 5.2:-28322688 MS.gene032779:CDS
AGTTCTTGAAGTTCCTTTCA+AGG 0.395758 5.2:-28326280 MS.gene032779:CDS
CCACCGCAGACGGCGGTGTT+GGG 0.399860 5.2:+28327517 None:intergenic
CCGTTGGTTACATCACTTAC+CGG 0.406430 5.2:-28327398 MS.gene032779:CDS
CAAGTTTATGGATTTGGCTC+TGG 0.409915 5.2:-28322374 MS.gene032779:CDS
GGCGGTGTTGGGCGCTTGGT+GGG 0.410615 5.2:+28327528 None:intergenic
GAGCATGGTCAACTAGGGTT+AGG 0.412501 5.2:-28321335 MS.gene032779:CDS
CTCTGGTAAGCGTGGTCAGT+TGG 0.416091 5.2:-28322357 MS.gene032779:CDS
CAGAAGAAAGATTATGGAGT+TGG 0.416289 5.2:-28324707 MS.gene032779:CDS
GTCCAATGATGTTATAGCCT+TGG 0.416419 5.2:+28322877 None:intergenic
AACAAAAGATGACACTTTGA+TGG 0.424790 5.2:+28322613 None:intergenic
TTGTTTGGTTTCTAGATACT+GGG 0.427216 5.2:-28322706 MS.gene032779:intron
CACCTGGGGAAGAGGCTTCA+AGG 0.427359 5.2:-28322050 MS.gene032779:CDS
AGACGGCGGTGTTGGGCGCT+TGG 0.428290 5.2:+28327524 None:intergenic
ATAGACTTGCTTCAGCTATA+GGG 0.429856 5.2:-28326338 MS.gene032779:CDS
ATGGTTCCTTTGGTCAACTT+GGG 0.431277 5.2:-28322664 MS.gene032779:CDS
TGGGGTGAGCATGGTCAACT+AGG 0.435894 5.2:-28321341 MS.gene032779:CDS
CATTCTATTGTCTTGTTGAA+AGG 0.439421 5.2:-28322554 MS.gene032779:intron
TCCCAAGGCTATAACATCAT+TGG 0.442483 5.2:-28322879 MS.gene032779:CDS
GAAGGGGAGGTTTATATGCT+TGG 0.442633 5.2:-28321841 MS.gene032779:CDS
ACCCATGTCTCTGCTGGTTG+GGG 0.447327 5.2:-28322842 MS.gene032779:CDS
GAAATAAAGACATGGGGTTG+GGG 0.447479 5.2:-28321359 MS.gene032779:CDS
ATCTTTGTTCCATCAAGGCC+AGG 0.448190 5.2:+28321512 None:intergenic
GCCCTTGAAGCCTCTTCCCC+AGG 0.448907 5.2:+28322048 None:intergenic
AGCATGGTCAACTAGGGTTA+GGG 0.449489 5.2:-28321334 MS.gene032779:CDS
ATCAGAGTTTATTGTGGAAG+TGG 0.455881 5.2:-28321245 MS.gene032779:CDS
TTTGAAGTCGTGGCGGGAAA+AGG 0.457548 5.2:+28327590 None:intergenic
AGACCAGCTAAGTCGATATT+CGG 0.457554 5.2:-28321778 MS.gene032779:intron
AGATTATGGAGTTGGGGTGC+TGG 0.458775 5.2:-28324699 MS.gene032779:CDS
ACCACCGCAGACGGCGGTGT+TGG 0.460841 5.2:+28327516 None:intergenic
CTTCAGGCGGCGGTGGAAGT+GGG 0.467841 5.2:+28327559 None:intergenic
GCCAATTTGGAGAAAGCCCC+TGG 0.468190 5.2:-28321530 MS.gene032779:CDS
ACAGATGGTCAATTAGGAAC+AGG 0.470662 5.2:-28324675 MS.gene032779:CDS
TAACCCATGTCTCTGCTGGT+TGG 0.470693 5.2:-28322844 MS.gene032779:CDS
AAGATTACTGATATTGCTAC+TGG 0.474658 5.2:-28321494 MS.gene032779:CDS
CATCTGTACACCTGGGGAAG+AGG 0.479854 5.2:-28322058 MS.gene032779:CDS
TTACAGTAACAGGACTGATT+CGG 0.486307 5.2:+28321300 None:intergenic
AAGGCATTATCATGGGGTAG+GGG 0.486746 5.2:-28322950 MS.gene032779:CDS
CAACTAGGGTTAGGGGATGA+TGG 0.489094 5.2:-28321326 MS.gene032779:CDS
CATGTCATCGCCTTAACCTC+TGG 0.489568 5.2:-28324573 MS.gene032779:intron
TTCATAACCCATGTCTCTGC+TGG 0.489836 5.2:-28322848 MS.gene032779:CDS
ATAGTTGGAATTTCTGCAAA+CGG 0.492234 5.2:-28322266 MS.gene032779:CDS
TACTAACTAACCAGAGGTTA+AGG 0.492797 5.2:+28324563 None:intergenic
ATCGATACGGATGCGGGAGA+TGG 0.494260 5.2:+28327428 None:intergenic
AAAAGTAGTGAGGATGGTTC+TGG 0.495188 5.2:-28326309 MS.gene032779:CDS
CCGTCTGCGGTGGTCATCAT+GGG 0.497233 5.2:-28327507 MS.gene032779:CDS
TTATCTTCTTCAGGCGGCGG+TGG 0.497458 5.2:+28327552 None:intergenic
TCCTTTGGTCAACTTGGGCA+TGG 0.499608 5.2:-28322659 MS.gene032779:CDS
ACTGGGTGCTTGTTCACTTG+TGG 0.504897 5.2:-28322689 MS.gene032779:CDS
AGGATCATGACCGGCGGCGA+TGG 0.506661 5.2:+28327353 None:intergenic
ACAATTTCTCTGCCCTTGAA+AGG 0.506933 5.2:+28326267 None:intergenic
GCAGACGCCGCCATCGCCGC+CGG 0.508042 5.2:-28327363 MS.gene032779:CDS
CGAGGACGGAGCAGTCGATA+GGG 0.509336 5.2:+28327481 None:intergenic
CAGTAATCTTTGTTCCATCA+AGG 0.509541 5.2:+28321507 None:intergenic
TAAATTTGTGTATAGGTGAA+GGG 0.514191 5.2:-28321858 MS.gene032779:intron
AATCTTCCTAAAGTTACTAG+TGG 0.514256 5.2:-28322305 MS.gene032779:CDS
GCGGCGGTGGAAGTGGGCGA+CGG 0.515028 5.2:+28327565 None:intergenic
TTGATGGACATCTGTACACC+TGG 0.516546 5.2:-28322066 MS.gene032779:CDS
TGTAACAGGTTCAGGTATTG+TGG 0.516755 5.2:-28326473 MS.gene032779:intron
AAATTTACTAAAGTCACTCT+AGG 0.522559 5.2:-28321983 MS.gene032779:CDS
GATGACATGAGCGCCGCCAC+AGG 0.526265 5.2:+28324587 None:intergenic
GGCGACGGCGTTTGAAGTCG+TGG 0.527172 5.2:+28327580 None:intergenic
CAGATGGGAAGGCATTATCA+TGG 0.531106 5.2:-28322958 MS.gene032779:CDS
ACATGGGGTTGGGGTGAGCA+TGG 0.531967 5.2:-28321350 MS.gene032779:CDS
TCGAGGACGGAGCAGTCGAT+AGG 0.532261 5.2:+28327480 None:intergenic
AAATTTGTGTATAGGTGAAG+GGG 0.534003 5.2:-28321857 MS.gene032779:intron
GGCCCCAACCAGCAGAGACA+TGG 0.534807 5.2:+28322840 None:intergenic
TGTTGATCAACATGTTGCAC+AGG 0.538380 5.2:-28322594 MS.gene032779:CDS
TCTGGTAAGCGTGGTCAGTT+GGG 0.538387 5.2:-28322356 MS.gene032779:CDS
ACGGCGTTTGAAGTCGTGGC+GGG 0.543199 5.2:+28327584 None:intergenic
ATCATGACCGGCGGCGATGG+CGG 0.543915 5.2:+28327356 None:intergenic
GTTCTTGAAGTTCCTTTCAA+GGG 0.544078 5.2:-28326279 MS.gene032779:CDS
CGTATCGATCGTGACGCCGT+TGG 0.548440 5.2:-28327414 MS.gene032779:CDS
AGGGGAAATTCTGGTCAACT+AGG 0.550647 5.2:-28322932 MS.gene032779:CDS
GCGCCCAACACCGCCGTCTG+CGG 0.553393 5.2:-28327520 MS.gene032779:CDS
AACCATGCTTTAGCTATGAC+TGG 0.553502 5.2:-28321956 MS.gene032779:intron
CACTTACCGGACCAAAGACT+CGG 0.554125 5.2:-28327385 MS.gene032779:CDS
CCCATGATGACCACCGCAGA+CGG 0.554590 5.2:+28327507 None:intergenic
ACCTGGGGAAGAGGCTTCAA+GGG 0.555641 5.2:-28322049 MS.gene032779:CDS
GGAAGGCATTATCATGGGGT+AGG 0.556542 5.2:-28322952 MS.gene032779:CDS
GAAGGCATTATCATGGGGTA+GGG 0.557288 5.2:-28322951 MS.gene032779:CDS
AGATGGGAAGGCATTATCAT+GGG 0.558236 5.2:-28322957 MS.gene032779:CDS
GAGAAATAAAGACATGGGGT+TGG 0.559680 5.2:-28321361 MS.gene032779:CDS
TCTTTGTTCCATCAAGGCCA+GGG 0.560551 5.2:+28321513 None:intergenic
CCCAACACCGCCGTCTGCGG+TGG 0.560688 5.2:-28327517 MS.gene032779:CDS
GAGGTACCTCTGAGGAGGCA+TGG 0.561099 5.2:-28326369 MS.gene032779:CDS
GTCACGATCGATACGGATGC+GGG 0.568991 5.2:+28327422 None:intergenic
AGAGACAGAGACAGTTGTTG+AGG 0.569073 5.2:+28324630 None:intergenic
GTACCGAATATCGACTTAGC+TGG 0.569691 5.2:+28321775 None:intergenic
GGTTTATCTTCTTCAGGCGG+CGG 0.570141 5.2:+28327549 None:intergenic
GGGGTGAGCATGGTCAACTA+GGG 0.573224 5.2:-28321340 MS.gene032779:CDS
GTAACAGGTTCAGGTATTGT+GGG 0.576738 5.2:-28326472 MS.gene032779:intron
GAAGTCGTGGCGGGAAAAGG+AGG 0.576848 5.2:+28327593 None:intergenic
GTCTCTTCACTTGCCTGTGG+CGG 0.578756 5.2:-28324600 MS.gene032779:CDS
AATTCTGGTCAACTAGGCCA+TGG 0.580093 5.2:-28322926 MS.gene032779:CDS
TACTAGTGGATTTGAAGATG+AGG 0.580190 5.2:-28322291 MS.gene032779:CDS
AGTTGGGGTGCTGGAACAGA+TGG 0.581646 5.2:-28324690 MS.gene032779:CDS
CGAATCGTGACTTGAGGTCG+AGG 0.582019 5.2:+28327463 None:intergenic
AGATCCTCTAGCAATGTGGC+GGG 0.585788 5.2:-28326445 MS.gene032779:CDS
CGTCACGATCGATACGGATG+CGG 0.585982 5.2:+28327421 None:intergenic
ACCATGCCCAAGTTGACCAA+AGG 0.586455 5.2:+28322658 None:intergenic
AAGTCACGATTCGAGATCTA+CGG 0.586936 5.2:-28327453 MS.gene032779:CDS
GAATGGAGAAATAAAGACAT+GGG 0.587926 5.2:-28321366 MS.gene032779:CDS
CCTCTAGCAATGTGGCGGGA+AGG 0.590275 5.2:-28326441 MS.gene032779:CDS
CGTCTGCCGAGTCTTTGGTC+CGG 0.596076 5.2:+28327379 None:intergenic
AAAACCAAAAGTAGTGAGGA+TGG 0.597864 5.2:-28326315 MS.gene032779:CDS
CAACGGCGTCACGATCGATA+CGG 0.598583 5.2:+28327415 None:intergenic
TGTTATTGACATCCTCTCCA+TGG 0.598699 5.2:+28322909 None:intergenic
CCTCTGAGGAGGCATGGAAG+AGG 0.600518 5.2:-28326363 MS.gene032779:CDS
TCCAAACGAAGGATCATGAC+CGG 0.601327 5.2:+28327344 None:intergenic
TGGGTGCTTGTTCACTTGTG+GGG 0.601956 5.2:-28322687 MS.gene032779:CDS
GCATCAATCAGAGTTTATTG+TGG 0.602448 5.2:-28321251 MS.gene032779:CDS
CCTTCCCGCCACATTGCTAG+AGG 0.602523 5.2:+28326441 None:intergenic
CTTTGTTCCATCAAGGCCAG+GGG 0.602668 5.2:+28321514 None:intergenic
TACCAGTCATAGCTAAAGCA+TGG 0.602812 5.2:+28321954 None:intergenic
GCCCCAACCAGCAGAGACAT+GGG 0.603314 5.2:+28322841 None:intergenic
GCAATGTGGCGGGAAGGAGT+TGG 0.603599 5.2:-28326435 MS.gene032779:CDS
AAGTCGTGGCGGGAAAAGGA+GGG 0.604331 5.2:+28327594 None:intergenic
GGATTTGGCTCTGGTAAGCG+TGG 0.604891 5.2:-28322365 MS.gene032779:CDS
TTTGTGTATAGGTGAAGGGG+AGG 0.605221 5.2:-28321854 MS.gene032779:intron
CTTTCAACAAGACAATAGAA+TGG 0.605288 5.2:+28322555 None:intergenic
ACAAAAGATGACACTTTGAT+GGG 0.605437 5.2:+28322614 None:intergenic
CAATAACATGCTGTATCCCA+AGG 0.608029 5.2:-28322894 MS.gene032779:CDS
AGGGGAGGTTTATATGCTTG+GGG 0.608859 5.2:-28321839 MS.gene032779:CDS
GAAGAAAGATTATGGAGTTG+GGG 0.609449 5.2:-28324705 MS.gene032779:CDS
GCATGGTCAACTAGGGTTAG+GGG 0.617224 5.2:-28321333 MS.gene032779:CDS
CAGATCCTCTAGCAATGTGG+CGG 0.617873 5.2:-28326446 MS.gene032779:CDS
TCGTGACTTGAGGTCGAGGA+CGG 0.618073 5.2:+28327467 None:intergenic
AATTTACTAAAGTCACTCTA+GGG 0.618918 5.2:-28321982 MS.gene032779:CDS
TTACTAAAGTCACTCTAGGG+TGG 0.623493 5.2:-28321979 MS.gene032779:CDS
GACGTAGAGTTTAAGCATTG+TGG 0.628921 5.2:+28322007 None:intergenic
AGAATGGAGAAATAAAGACA+TGG 0.634005 5.2:-28321367 MS.gene032779:CDS
TCTGTCTCTTCACTTGCCTG+TGG 0.634388 5.2:-28324603 MS.gene032779:CDS
TAGAGTTTAAGCATTGTGGA+AGG 0.636834 5.2:+28322011 None:intergenic
AACCTGAAACAAAACTTGAG+TGG 0.640088 5.2:+28322819 None:intergenic
CATGTTGCACAGGTAGCATG+TGG 0.640388 5.2:-28322584 MS.gene032779:CDS
GGAAGGAGTTGGTAAGAACA+AGG 0.640543 5.2:-28326424 MS.gene032779:CDS
GTCAAAGCTTGTGAGAGCTG+AGG 0.645302 5.2:-28326388 MS.gene032779:CDS
AGATCTCGAATCGTGACTTG+AGG 0.645525 5.2:+28327457 None:intergenic
TGATGGACATCTGTACACCT+GGG 0.647907 5.2:-28322065 MS.gene032779:CDS
GAAGATCACTAAGCACTCCA+AGG 0.652649 5.2:+28321809 None:intergenic
AGGGAAAACCAAAAGTAGTG+AGG 0.656506 5.2:-28326319 MS.gene032779:CDS
GACGGCGTTTGAAGTCGTGG+CGG 0.662190 5.2:+28327583 None:intergenic
CAACAGATCCTCTAGCAATG+TGG 0.667215 5.2:-28326449 MS.gene032779:CDS
CCTCTTCCATGCCTCCTCAG+AGG 0.667863 5.2:+28326363 None:intergenic
TGGTCAACTAGGCCATGGAG+AGG 0.668725 5.2:-28322921 MS.gene032779:CDS
CCGGTAAGTGATGTAACCAA+CGG 0.669665 5.2:+28327398 None:intergenic
GAGCTGAGGTACCTCTGAGG+AGG 0.675704 5.2:-28326374 MS.gene032779:CDS
GTGGGTTTATCTTCTTCAGG+CGG 0.678535 5.2:+28327546 None:intergenic
ATGATGACCACCGCAGACGG+CGG 0.687548 5.2:+28327510 None:intergenic
GATGGGAAGGCATTATCATG+GGG 0.688944 5.2:-28322956 MS.gene032779:CDS
AATGGAGAAATAAAGACATG+GGG 0.691455 5.2:-28321365 MS.gene032779:CDS
GGGGAGGTTTATATGCTTGG+GGG 0.710612 5.2:-28321838 MS.gene032779:CDS
GATCACTAAGCACTCCAAGG+TGG 0.711419 5.2:+28321812 None:intergenic
TGAGAGCTGAGGTACCTCTG+AGG 0.711829 5.2:-28326377 MS.gene032779:CDS
GATGGACATCTGTACACCTG+GGG 0.712426 5.2:-28322064 MS.gene032779:CDS
AAACGAAGGATCATGACCGG+CGG 0.713083 5.2:+28327347 None:intergenic
TTAACAGTGACTCCAAACGA+AGG 0.718469 5.2:+28327333 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAAAAATAATTTA+TGG - chr5.2:28325737-28325756 MS.gene032779:intron 0.0%
!! TTATTGAGAAAAAAAAAAAT+GGG + chr5.2:28323863-28323882 None:intergenic 10.0%
!! TTTATTGAGAAAAAAAAAAA+TGG + chr5.2:28323864-28323883 None:intergenic 10.0%
!!! AAAAATAATTTATGGATTAA+TGG - chr5.2:28325176-28325195 MS.gene032779:intron 10.0%
!!! AATAGATTTTATTTTATCTT+TGG + chr5.2:28326507-28326526 None:intergenic 10.0%
!!! ATATATTTATGACAATTTTA+GGG + chr5.2:28323458-28323477 None:intergenic 10.0%
!!! ATATTTTTTATTTTTTGAGA+AGG + chr5.2:28325058-28325077 None:intergenic 10.0%
!!! TATATATTTATGACAATTTT+AGG + chr5.2:28323459-28323478 None:intergenic 10.0%
!!! TATGTATTTTTTTTTTTTTG+AGG - chr5.2:28323479-28323498 MS.gene032779:intron 10.0%
!!! TATTTTTTATTTTTTGAGAA+GGG + chr5.2:28325057-28325076 None:intergenic 10.0%
!! AAAAAAAAAAAAATGCAGAT+GGG - chr5.2:28325859-28325878 MS.gene032779:intron 15.0%
!! AATATAATCTTTAAACTAAG+AGG - chr5.2:28323398-28323417 MS.gene032779:intron 15.0%
!! AATATAATTTGGTAAATAGT+TGG - chr5.2:28322784-28322803 MS.gene032779:intron 15.0%
!! TAAAAAAAAAAAAATGCAGA+TGG - chr5.2:28325858-28325877 MS.gene032779:intron 15.0%
!! TACCTAATTATGTTAAAATT+TGG - chr5.2:28321783-28321802 MS.gene032779:CDS 15.0%
!! TCTACATTAGAAATATAATT+TGG - chr5.2:28322773-28322792 MS.gene032779:intron 15.0%
!! TGTATATTAGTAGAAAAATA+TGG - chr5.2:28324516-28324535 MS.gene032779:intron 15.0%
!! TTGAGTAAAAAAATAGATTT+AGG - chr5.2:28323808-28323827 MS.gene032779:intron 15.0%
!!! AACATTTTGATATTTTGTAT+TGG + chr5.2:28325783-28325802 None:intergenic 15.0%
!!! AATTTTCAGCTTAATTTTTT+AGG - chr5.2:28321683-28321702 MS.gene032779:intron 15.0%
!!! ACATTTTGATATTTTGTATT+GGG + chr5.2:28325782-28325801 None:intergenic 15.0%
!!! ATATTTTTAGGTTATTTCTA+CGG + chr5.2:28325563-28325582 None:intergenic 15.0%
!!! ATTTTCAGCTTAATTTTTTA+GGG - chr5.2:28321684-28321703 MS.gene032779:intron 15.0%
!!! TAATTATGTAATTTAGTTTG+TGG - chr5.2:28322734-28322753 MS.gene032779:intron 15.0%
!!! TTTATTTTTCTTTTTCCATA+TGG - chr5.2:28322631-28322650 MS.gene032779:CDS 15.0%
!! AAATATGGTCAAAGTAAATT+AGG - chr5.2:28324531-28324550 MS.gene032779:intron 20.0%
!! ACAAACAAAATTCATTCAAA+AGG + chr5.2:28326954-28326973 None:intergenic 20.0%
!! AGTAAAAAAATAGATTTAGG+AGG - chr5.2:28323811-28323830 MS.gene032779:intron 20.0%
!! ATGTTAGAAGTAGTAAATAA+TGG + chr5.2:28325464-28325483 None:intergenic 20.0%
!! CAAACAAAATTCATTCAAAA+GGG + chr5.2:28326953-28326972 None:intergenic 20.0%
!! TACAAAATAAGTTAACCATA+TGG + chr5.2:28322649-28322668 None:intergenic 20.0%
!! TTGGATACATCAATTATTTA+CGG - chr5.2:28323626-28323645 MS.gene032779:intron 20.0%
!! TTTATTTGAGTATTTGATGA+TGG - chr5.2:28322972-28322991 MS.gene032779:intron 20.0%
!! TTTCATTGAATAACATTCAT+AGG - chr5.2:28323335-28323354 MS.gene032779:intron 20.0%
!!! AAAACAAAAGTGTTGTATAT+TGG + chr5.2:28324307-28324326 None:intergenic 20.0%
!!! AAACAAAAGTGTTGTATATT+GGG + chr5.2:28324306-28324325 None:intergenic 20.0%
!!! ACATATCAAGAAAATTTTGT+GGG - chr5.2:28325106-28325125 MS.gene032779:intron 20.0%
!!! ACCTAAAAATATAGTGATTT+TGG - chr5.2:28325571-28325590 MS.gene032779:intron 20.0%
!!! ACGGTTATAAACAAATATTT+TGG - chr5.2:28323607-28323626 MS.gene032779:intron 20.0%
!!! ATAGCATAATGTTTTTTGTT+TGG + chr5.2:28323109-28323128 None:intergenic 20.0%
!!! ATTAGTTACAAGTTTGATTT+GGG - chr5.2:28322944-28322963 MS.gene032779:CDS 20.0%
!!! ATTTGTTGAAATTATACTTC+AGG + chr5.2:28323545-28323564 None:intergenic 20.0%
!!! CACCAAATTTTAACATAATT+AGG + chr5.2:28321788-28321807 None:intergenic 20.0%
!!! CTTTTGTTTCTTTTTATCTA+GGG - chr5.2:28321545-28321564 MS.gene032779:intron 20.0%
!!! TACATATCAAGAAAATTTTG+TGG - chr5.2:28325105-28325124 MS.gene032779:intron 20.0%
!!! TCCAAAATCACTATATTTTT+AGG + chr5.2:28325575-28325594 None:intergenic 20.0%
!!! TCTTTTGTTTCTTTTTATCT+AGG - chr5.2:28321544-28321563 MS.gene032779:CDS 20.0%
!!! TGTTTGTTAAATTTGTGTAT+AGG - chr5.2:28326967-28326986 MS.gene032779:intron 20.0%
!!! TTGATAACACTTTGAATTTA+GGG - chr5.2:28322677-28322696 MS.gene032779:CDS 20.0%
!!! TTTGATAACACTTTGAATTT+AGG - chr5.2:28322676-28322695 MS.gene032779:CDS 20.0%
!!! TTTTAAAACGTTACTAATCA+CGG + chr5.2:28321895-28321914 None:intergenic 20.0%
!!! TTTTGAATTTGCATTTGAAT+TGG - chr5.2:28321569-28321588 MS.gene032779:intron 20.0%
!!! TTTTTCTCAATAAAAGAACA+AGG - chr5.2:28323870-28323889 MS.gene032779:intron 20.0%
! AAAAATGAAACCAAACCTAA+TGG + chr5.2:28322057-28322076 None:intergenic 25.0%
! AAAATACAGAAGAATGACAT+TGG - chr5.2:28322328-28322347 MS.gene032779:CDS 25.0%
! AAACATTATGCTATTGTTTG+TGG - chr5.2:28323115-28323134 MS.gene032779:intron 25.0%
! AAATTTACTAAAGTCACTCT+AGG - chr5.2:28326849-28326868 MS.gene032779:intron 25.0%
! AAGAATCAGAAGAAAGATTA+TGG - chr5.2:28324119-28324138 MS.gene032779:intron 25.0%
! AATATCCATTATCTCTCTAT+TGG - chr5.2:28326728-28326747 MS.gene032779:intron 25.0%
! AATTTACTAAAGTCACTCTA+GGG - chr5.2:28326850-28326869 MS.gene032779:intron 25.0%
! ACAAATAACTGAACTATAGA+CGG - chr5.2:28321999-28322018 MS.gene032779:CDS 25.0%
! ACAATTAAGTACAACTCAAA+TGG + chr5.2:28324700-28324719 None:intergenic 25.0%
! ATTTCCATGTATAAAACTCT+CGG - chr5.2:28322225-28322244 MS.gene032779:intron 25.0%
! CATTAGTTACAAGTTTGATT+TGG - chr5.2:28322943-28322962 MS.gene032779:CDS 25.0%
! TAAATTTGTGTATAGGTGAA+GGG - chr5.2:28326974-28326993 MS.gene032779:intron 25.0%
! TAATCAAGATTTACAGTAAC+AGG + chr5.2:28327545-28327564 None:intergenic 25.0%
! TCAAATCAAGTTTATGGATT+TGG - chr5.2:28326452-28326471 MS.gene032779:CDS 25.0%
! TCAAGAGAGATAAATGATTT+GGG - chr5.2:28323781-28323800 MS.gene032779:intron 25.0%
! TGTCTTTCAAATCAAGTTTA+TGG - chr5.2:28326446-28326465 MS.gene032779:CDS 25.0%
! TGTTACACTTTGTTCTATTT+CGG + chr5.2:28321758-28321777 None:intergenic 25.0%
! TTAAATTTGTGTATAGGTGA+AGG - chr5.2:28326973-28326992 MS.gene032779:intron 25.0%
! TTCAAGAGAGATAAATGATT+TGG - chr5.2:28323780-28323799 MS.gene032779:intron 25.0%
!! AAGGAATTAGTTAGCTTATT+CGG + chr5.2:28323738-28323757 None:intergenic 25.0%
!! AAGTTTGTAACTTCAAGTTA+AGG - chr5.2:28321809-28321828 MS.gene032779:CDS 25.0%
!! ACTAACGGATAGAAATAAAA+AGG + chr5.2:28323757-28323776 None:intergenic 25.0%
!! AGTCACTGTTAATTCTAAAA+AGG - chr5.2:28321510-28321529 MS.gene032779:CDS 25.0%
!! ATTGTTTGAAACTTCAATGA+TGG - chr5.2:28325243-28325262 MS.gene032779:intron 25.0%
!! CAACATTACACATTTTCAAA+TGG - chr5.2:28324555-28324574 MS.gene032779:intron 25.0%
!! CAACTATTTGGATTTGAAAT+TGG - chr5.2:28322827-28322846 MS.gene032779:CDS 25.0%
!! TTTTTGATAGATAGACGAAA+TGG + chr5.2:28324917-28324936 None:intergenic 25.0%
!!! AACTTAAACAATGAGTTGAT+CGG + chr5.2:28325425-28325444 None:intergenic 25.0%
!!! ATGTTGTTTTCTCAACTATT+TGG - chr5.2:28322815-28322834 MS.gene032779:intron 25.0%
!!! ATTTTTTGAATTTCACATCC+AGG + chr5.2:28326688-28326707 None:intergenic 25.0%
!!! GCAATTTTAGTACTTCATTA+AGG - chr5.2:28322305-28322324 MS.gene032779:CDS 25.0%
!!! TAATGGTGAAGTATTTTGAT+AGG - chr5.2:28325193-28325212 MS.gene032779:intron 25.0%
!!! TATGTGTTGCTTTATTTCAT+AGG + chr5.2:28323142-28323161 None:intergenic 25.0%
!!! TGACAGCAGAAATTTTTTAA+GGG + chr5.2:28327200-28327219 None:intergenic 25.0%
AAAAAAAAATGCAGATGGGA+AGG - chr5.2:28325863-28325882 MS.gene032779:intron 30.0%
AAAGATGATACCTAAGTCTA+AGG + chr5.2:28323432-28323451 None:intergenic 30.0%
AAATTTGTGTATAGGTGAAG+GGG - chr5.2:28326975-28326994 MS.gene032779:intron 30.0%
AACAAAAGATGACACTTTGA+TGG + chr5.2:28326222-28326241 None:intergenic 30.0%
AACAACCAATAGAGAGATAA+TGG + chr5.2:28326736-28326755 None:intergenic 30.0%
AAGATTACTGATATTGCTAC+TGG - chr5.2:28327338-28327357 MS.gene032779:CDS 30.0%
AATAAAAGAACAAGGATCCT+CGG - chr5.2:28323878-28323897 MS.gene032779:intron 30.0%
AATCTTCCTAAAGTTACTAG+TGG - chr5.2:28326527-28326546 MS.gene032779:intron 30.0%
AATGGAGAAATAAAGACATG+GGG - chr5.2:28327467-28327486 MS.gene032779:CDS 30.0%
ACAAAAGATGACACTTTGAT+GGG + chr5.2:28326221-28326240 None:intergenic 30.0%
ACAAGAACAAGAAAAGACAA+AGG + chr5.2:28326110-28326129 None:intergenic 30.0%
ACACTACAAAGTTGAAAAAC+AGG - chr5.2:28323920-28323939 MS.gene032779:intron 30.0%
AGAAAGTGAAAGTAGATTGA+TGG - chr5.2:28324063-28324082 MS.gene032779:intron 30.0%
AGAAGAAAGATTATGGAGTT+GGG - chr5.2:28324126-28324145 MS.gene032779:intron 30.0%
AGAATGGAGAAATAAAGACA+TGG - chr5.2:28327465-28327484 MS.gene032779:CDS 30.0%
ATACATACTAACTTCGATCA+CGG - chr5.2:28323588-28323607 MS.gene032779:intron 30.0%
ATAGTTGGAATTTCTGCAAA+CGG - chr5.2:28326566-28326585 MS.gene032779:intron 30.0%
ATCTCTCTTGAAAACACTAA+CGG + chr5.2:28323772-28323791 None:intergenic 30.0%
ATGTTTCAAAGATGAAGATG+TGG - chr5.2:28321846-28321865 MS.gene032779:CDS 30.0%
ATTCAACATGTTGAACCATT+AGG - chr5.2:28322039-28322058 MS.gene032779:CDS 30.0%
ATTGAAGGAAGGAAGTAAAA+TGG + chr5.2:28322879-28322898 None:intergenic 30.0%
CTATAGTTCAGTTATTTGTG+TGG + chr5.2:28321998-28322017 None:intergenic 30.0%
CTTTCAACAAGACAATAGAA+TGG + chr5.2:28326280-28326299 None:intergenic 30.0%
CTTTCTCAATATTCAGAGAA+TGG - chr5.2:28327449-28327468 MS.gene032779:CDS 30.0%
GAATGGAGAAATAAAGACAT+GGG - chr5.2:28327466-28327485 MS.gene032779:CDS 30.0%
GATAGGAAATCATGAAACTT+TGG + chr5.2:28326919-28326938 None:intergenic 30.0%
GTAGTAAATAATGGTCCTAT+TGG + chr5.2:28325455-28325474 None:intergenic 30.0%
GTTACACTTTGTTCTATTTC+GGG + chr5.2:28321757-28321776 None:intergenic 30.0%
GTTAGAAATTTCCCTAATCA+TGG + chr5.2:28323281-28323300 None:intergenic 30.0%
TAAGCATGTATGTATAGAGA+AGG + chr5.2:28322265-28322284 None:intergenic 30.0%
TCAAATCCACTAGTAACTTT+AGG + chr5.2:28326536-28326555 None:intergenic 30.0%
TCAAATGGTAAAAGTTGTGA+GGG - chr5.2:28325622-28325641 MS.gene032779:intron 30.0%
TGTCTCATCATATTGATCAT+CGG + chr5.2:28321924-28321943 None:intergenic 30.0%
TGTGAATCACATATAATGCA+AGG + chr5.2:28326634-28326653 None:intergenic 30.0%
TGTTTACAATTAAGTCCAGA+AGG + chr5.2:28327085-28327104 None:intergenic 30.0%
TTCAAATGGATCATCTATTG+CGG - chr5.2:28324569-28324588 MS.gene032779:intron 30.0%
TTCAACTTTGTAGTGTTTAG+CGG + chr5.2:28323916-28323935 None:intergenic 30.0%
TTGTGTGTGTGAGTTTATAA+TGG - chr5.2:28324886-28324905 MS.gene032779:intron 30.0%
TTGTGTGTGTGTGTTTATAA+TGG - chr5.2:28324979-28324998 MS.gene032779:intron 30.0%
TTTCCATGTATAAAACTCTC+GGG - chr5.2:28322226-28322245 MS.gene032779:intron 30.0%
TTTGAAGATGAGGAAATAGT+TGG - chr5.2:28326551-28326570 MS.gene032779:intron 30.0%
! ATTGTCTTGTTGAAAGGTAT+TGG - chr5.2:28326284-28326303 MS.gene032779:CDS 30.0%
! ATTTAAGACAGTGACTTGAT+GGG - chr5.2:28325313-28325332 MS.gene032779:intron 30.0%
! CATTCTATTGTCTTGTTGAA+AGG - chr5.2:28326278-28326297 MS.gene032779:CDS 30.0%
! TGTCTTTTCTTGTTCTTGTT+TGG - chr5.2:28326111-28326130 MS.gene032779:intron 30.0%
! TTCAAGTTAAGGACAACAAT+GGG - chr5.2:28321820-28321839 MS.gene032779:CDS 30.0%
! TTGTTTGGTTTCTAGATACT+GGG - chr5.2:28326126-28326145 MS.gene032779:intron 30.0%
!! AGTTTTATACATGGAAATGC+CGG + chr5.2:28322223-28322242 None:intergenic 30.0%
!! ATGAAACTCTGAAACATTTG+TGG + chr5.2:28327223-28327242 None:intergenic 30.0%
!! GCTTCTAAAATGAATAGTTG+AGG - chr5.2:28326058-28326077 MS.gene032779:intron 30.0%
!! TGTTGAAAGGTATTAGATTG+AGG - chr5.2:28326331-28326350 MS.gene032779:CDS 30.0%
!! TTAGTTCTCAGTTTGTTGAA+AGG - chr5.2:28326318-28326337 MS.gene032779:CDS 30.0%
!! TTTAAGTTGTGATGACCAAT+AGG - chr5.2:28325437-28325456 MS.gene032779:intron 30.0%
!! TTTTTGGTAGATAGACGAAA+TGG + chr5.2:28325010-28325029 None:intergenic 30.0%
!!! ACTTGCATGATTTTTTTTGC+TGG - chr5.2:28324741-28324760 MS.gene032779:CDS 30.0%
!!! GACAGCAGAAATTTTTTAAG+GGG + chr5.2:28327199-28327218 None:intergenic 30.0%
!!! GTGACAGCAGAAATTTTTTA+AGG + chr5.2:28327201-28327220 None:intergenic 30.0%
!!! GTTTGTTTTTTTCTCTCATG+TGG - chr5.2:28322180-28322199 MS.gene032779:intron 30.0%
!!! TTTTTAGGTTATTTCTACGG+TGG + chr5.2:28325560-28325579 None:intergenic 30.0%
!!! TTTTTTTCTCTCATGTGGAT+GGG - chr5.2:28322185-28322204 MS.gene032779:intron 30.0%
AAAACCAAAAGTAGTGAGGA+TGG - chr5.2:28322517-28322536 MS.gene032779:intron 35.0%
AACCTGAAACAAAACTTGAG+TGG + chr5.2:28326016-28326035 None:intergenic 35.0%
ACAAGATAAATCAAGTCACC+TGG - chr5.2:28326667-28326686 MS.gene032779:intron 35.0%
ACATGTTGAACCATTAGGTT+TGG - chr5.2:28322044-28322063 MS.gene032779:CDS 35.0%
AGAAATAAAGACATGGGGTT+GGG - chr5.2:28327472-28327491 MS.gene032779:CDS 35.0%
AGATTCAAGAGAAGCCAATT+TGG - chr5.2:28327289-28327308 MS.gene032779:intron 35.0%
AGTTCAGTTATTTGTGTGGT+TGG + chr5.2:28321994-28322013 None:intergenic 35.0%
AGTTCTTGAAGTTCCTTTCA+AGG - chr5.2:28322552-28322571 MS.gene032779:intron 35.0%
AGTTTCGTCGCTAAGTTATT+TGG - chr5.2:28325708-28325727 MS.gene032779:intron 35.0%
ATCAGAGTTTATTGTGGAAG+TGG - chr5.2:28327587-28327606 MS.gene032779:CDS 35.0%
ATTGTAGAATCACACACAGT+GGG - chr5.2:28323198-28323217 MS.gene032779:intron 35.0%
ATTTACGGTAACTTCGATCA+CGG - chr5.2:28323641-28323660 MS.gene032779:intron 35.0%
CAGAAGAAAGATTATGGAGT+TGG - chr5.2:28324125-28324144 MS.gene032779:intron 35.0%
CAGTAATCTTTGTTCCATCA+AGG + chr5.2:28327328-28327347 None:intergenic 35.0%
CTAAGCAATTAACATACCCT+AGG + chr5.2:28322122-28322141 None:intergenic 35.0%
CTAGGGTATGTTAATTGCTT+AGG - chr5.2:28322120-28322139 MS.gene032779:intron 35.0%
CTCAAATGGTAAAAGTTGTG+AGG - chr5.2:28325621-28325640 MS.gene032779:intron 35.0%
GAAGAAAGATTATGGAGTTG+GGG - chr5.2:28324127-28324146 MS.gene032779:intron 35.0%
GATATGTACTAACTAACCAG+AGG + chr5.2:28324278-28324297 None:intergenic 35.0%
GCAAAAATGCCGAAATTGTT+AGG - chr5.2:28324823-28324842 MS.gene032779:intron 35.0%
GCATCAATCAGAGTTTATTG+TGG - chr5.2:28327581-28327600 MS.gene032779:CDS 35.0%
GGAACTGTGTCAAGTATTAT+GGG + chr5.2:28324360-28324379 None:intergenic 35.0%
GTTCTTGAAGTTCCTTTCAA+GGG - chr5.2:28322553-28322572 MS.gene032779:intron 35.0%
TAAAACGTTACTAATCACGG+TGG + chr5.2:28321892-28321911 None:intergenic 35.0%
TAATGCAAGGTAAGAAGTGA+TGG + chr5.2:28326621-28326640 None:intergenic 35.0%
TACTAACTAACCAGAGGTTA+AGG + chr5.2:28324272-28324291 None:intergenic 35.0%
TATAAACTCACACACACAAG+TGG + chr5.2:28324885-28324904 None:intergenic 35.0%
TCAAATGGATCATCTATTGC+GGG - chr5.2:28324570-28324589 MS.gene032779:intron 35.0%
TCAACATGTTGAATGTAGAC+CGG + chr5.2:28322033-28322052 None:intergenic 35.0%
TCAAGTTAAGGACAACAATG+GGG - chr5.2:28321821-28321840 MS.gene032779:CDS 35.0%
TCCAATGATGTTATAGCCTT+GGG + chr5.2:28325957-28325976 None:intergenic 35.0%
TCTTAAACCTCTACTCTCAA+AGG + chr5.2:28325282-28325301 None:intergenic 35.0%
TTAATTGCTTAGGCTCGTTA+TGG - chr5.2:28322130-28322149 MS.gene032779:intron 35.0%
TTACAGTAACAGGACTGATT+CGG + chr5.2:28327535-28327554 None:intergenic 35.0%
TTCCATGTATAAAACTCTCG+GGG - chr5.2:28322227-28322246 MS.gene032779:intron 35.0%
! AATAGACTTGCTTCAGCTAT+AGG - chr5.2:28322493-28322512 MS.gene032779:intron 35.0%
! ATAGACTTGCTTCAGCTATA+GGG - chr5.2:28322494-28322513 MS.gene032779:intron 35.0%
! ATGATACCTAAGTCTAAGGT+AGG + chr5.2:28323428-28323447 None:intergenic 35.0%
! ATGTGATTGTCAACTTGCTT+AGG + chr5.2:28327411-28327430 None:intergenic 35.0%
! CATTTAAGACAGTGACTTGA+TGG - chr5.2:28325312-28325331 MS.gene032779:intron 35.0%
! CTTCAAGTTAAGGACAACAA+TGG - chr5.2:28321819-28321838 MS.gene032779:CDS 35.0%
! CTTGTTTGGTTTCTAGATAC+TGG - chr5.2:28326125-28326144 MS.gene032779:intron 35.0%
! TAGAGTTTAAGCATTGTGGA+AGG + chr5.2:28326824-28326843 None:intergenic 35.0%
! TGACTTGATGGGTATAAGTT+TGG - chr5.2:28325324-28325343 MS.gene032779:intron 35.0%
! TTTTGCGTCATGACATTTTG+TGG - chr5.2:28322915-28322934 MS.gene032779:CDS 35.0%
!! AATTGATAGTGAGTCAGTGA+CGG - chr5.2:28321632-28321651 MS.gene032779:intron 35.0%
!! ACACTTTAGATTGATGATGC+AGG - chr5.2:28326422-28326441 MS.gene032779:CDS 35.0%
!! TACTAGTGGATTTGAAGATG+AGG - chr5.2:28326541-28326560 MS.gene032779:intron 35.0%
!! TTACAAGTTTGATTTGGGCA+AGG - chr5.2:28322949-28322968 MS.gene032779:CDS 35.0%
!!! AGCAGAAATTTTTTAAGGGG+TGG + chr5.2:28327196-28327215 None:intergenic 35.0%
!!! GTTGTTTTTGCATCAGTTGA+TGG - chr5.2:28326750-28326769 MS.gene032779:intron 35.0%
!!! GTTTTTTTCTCTCATGTGGA+TGG - chr5.2:28322184-28322203 MS.gene032779:intron 35.0%
!!! TGGTGAAGTATTTTGATAGG+TGG - chr5.2:28325196-28325215 MS.gene032779:intron 35.0%
AAAAGTAGTGAGGATGGTTC+TGG - chr5.2:28322523-28322542 MS.gene032779:intron 40.0%
AAACACACACACACAAGTAG+AGG + chr5.2:28324975-28324994 None:intergenic 40.0%
AAATGCCGAAATTGTTAGGC+CGG - chr5.2:28324827-28324846 MS.gene032779:intron 40.0%
AACAAGGCTGAACTCAAAAC+TGG - chr5.2:28323958-28323977 MS.gene032779:intron 40.0%
AACCATGCTTTAGCTATGAC+TGG - chr5.2:28326876-28326895 MS.gene032779:intron 40.0%
AAGGGGAGGTTTATATGCTT+GGG - chr5.2:28326992-28327011 MS.gene032779:intron 40.0%
AAGTCACGATTCGAGATCTA+CGG - chr5.2:28321379-28321398 MS.gene032779:intron 40.0%
ACAATTTCTCTGCCCTTGAA+AGG + chr5.2:28322568-28322587 None:intergenic 40.0%
ACACAAGTAGAGGTTTGAGA+AGG + chr5.2:28324965-28324984 None:intergenic 40.0%
ACAGATGGTCAATTAGGAAC+AGG - chr5.2:28324157-28324176 MS.gene032779:intron 40.0%
ACTATATCTTGCCTGTGACA+AGG + chr5.2:28327379-28327398 None:intergenic 40.0%
AGACCAGCTAAGTCGATATT+CGG - chr5.2:28327054-28327073 MS.gene032779:intron 40.0%
AGCAATTAACATACCCTAGG+AGG + chr5.2:28322119-28322138 None:intergenic 40.0%
AGGGAAAACCAAAAGTAGTG+AGG - chr5.2:28322513-28322532 MS.gene032779:intron 40.0%
AGTAGATTCAGGCGAATTGA+AGG + chr5.2:28322894-28322913 None:intergenic 40.0%
ATGGTTCCTTTGGTCAACTT+GGG - chr5.2:28326168-28326187 MS.gene032779:intron 40.0%
ATTCAAAAGGGAAGTCACAG+AGG + chr5.2:28326941-28326960 None:intergenic 40.0%
CAACATGTTGAATGTAGACC+GGG + chr5.2:28322032-28322051 None:intergenic 40.0%
CAATAACATGCTGTATCCCA+AGG - chr5.2:28325938-28325957 MS.gene032779:intron 40.0%
CACAAGTAGAGGTTTGAGAA+GGG + chr5.2:28324964-28324983 None:intergenic 40.0%
CATTGGTGTATGTGTGTAAC+AGG - chr5.2:28322345-28322364 MS.gene032779:CDS 40.0%
CATTGTAGAATCACACACAG+TGG - chr5.2:28323197-28323216 MS.gene032779:intron 40.0%
CTCGTTATGGTACTAATCTG+CGG - chr5.2:28322143-28322162 MS.gene032779:intron 40.0%
CTGTGTCAAGTATTATGGGA+CGG + chr5.2:28324356-28324375 None:intergenic 40.0%
GAAATAAAGACATGGGGTTG+GGG - chr5.2:28327473-28327492 MS.gene032779:CDS 40.0%
GAGAAATAAAGACATGGGGT+TGG - chr5.2:28327471-28327490 MS.gene032779:CDS 40.0%
GATCATAGTGCTGCATTATC+TGG - chr5.2:28326590-28326609 MS.gene032779:intron 40.0%
GGGAACTGTGTCAAGTATTA+TGG + chr5.2:28324361-28324380 None:intergenic 40.0%
GTATTAGATTGAGGCATGTC+TGG - chr5.2:28326340-28326359 MS.gene032779:CDS 40.0%
GTCCAATGATGTTATAGCCT+TGG + chr5.2:28325958-28325977 None:intergenic 40.0%
TAATTACCCACCTATCAACG+TGG - chr5.2:28325533-28325552 MS.gene032779:intron 40.0%
TACCAGTCATAGCTAAAGCA+TGG + chr5.2:28326881-28326900 None:intergenic 40.0%
TACCATTTGAGCTGCAACTA+CGG + chr5.2:28325612-28325631 None:intergenic 40.0%
TATACATGGAAATGCCGGAT+CGG + chr5.2:28322218-28322237 None:intergenic 40.0%
TCCCAAGGCTATAACATCAT+TGG - chr5.2:28325953-28325972 MS.gene032779:intron 40.0%
TCGTATTATGTGTCCTCCTA+GGG - chr5.2:28322103-28322122 MS.gene032779:intron 40.0%
TCGTTATGGTACTAATCTGC+GGG - chr5.2:28322144-28322163 MS.gene032779:intron 40.0%
TGACGCAAAACAGTAGATTC+AGG + chr5.2:28322905-28322924 None:intergenic 40.0%
TGTATGTGTGTAACAGGTTC+AGG - chr5.2:28322351-28322370 MS.gene032779:CDS 40.0%
TGTTATTGACATCCTCTCCA+TGG + chr5.2:28325926-28325945 None:intergenic 40.0%
TGTTGATCAACATGTTGCAC+AGG - chr5.2:28326238-28326257 MS.gene032779:intron 40.0%
TTAACAGTGACTCCAAACGA+AGG + chr5.2:28321502-28321521 None:intergenic 40.0%
TTCCCTAATCATGGTGACTT+CGG + chr5.2:28323272-28323291 None:intergenic 40.0%
! AGAACCATCCTCACTACTTT+TGG + chr5.2:28322524-28322543 None:intergenic 40.0%
! CAAGTTTATGGATTTGGCTC+TGG - chr5.2:28326458-28326477 MS.gene032779:CDS 40.0%
! CATCATATTGATCATCGGCT+CGG + chr5.2:28321919-28321938 None:intergenic 40.0%
! GACGTAGAGTTTAAGCATTG+TGG + chr5.2:28326828-28326847 None:intergenic 40.0%
! GGTTTTCCTACCTTAGACTT+AGG - chr5.2:28323419-28323438 MS.gene032779:intron 40.0%
! GTAACAGGTTCAGGTATTGT+GGG - chr5.2:28322360-28322379 MS.gene032779:CDS 40.0%
! GTACGAAGTACGTGTTTTGT+GGG - chr5.2:28324021-28324040 MS.gene032779:intron 40.0%
! GTGCATTGACATGCGTAATA+GGG + chr5.2:28324381-28324400 None:intergenic 40.0%
! TGTAACAGGTTCAGGTATTG+TGG - chr5.2:28322359-28322378 MS.gene032779:CDS 40.0%
! TGTGCATTGACATGCGTAAT+AGG + chr5.2:28324382-28324401 None:intergenic 40.0%
! TTACTAAAGTCACTCTAGGG+TGG - chr5.2:28326853-28326872 MS.gene032779:intron 40.0%
! TTTTGATAGGTGGTCTATCG+TGG - chr5.2:28325206-28325225 MS.gene032779:intron 40.0%
!! ACATTGATTTGTTGGAGTGC+GGG - chr5.2:28325645-28325664 MS.gene032779:intron 40.0%
!! AGATGGGAAGGCATTATCAT+GGG - chr5.2:28325875-28325894 MS.gene032779:intron 40.0%
!! ATCCCCGAGAGTTTTATACA+TGG + chr5.2:28322232-28322251 None:intergenic 40.0%
!! ATTTGATGATGGCATGATGC+TGG - chr5.2:28322983-28323002 MS.gene032779:intron 40.0%
!! GACATTGATTTGTTGGAGTG+CGG - chr5.2:28325644-28325663 MS.gene032779:intron 40.0%
!! TGTGAGGGACATTGATTTGT+TGG - chr5.2:28325637-28325656 MS.gene032779:intron 40.0%
!! TTGAGTTCAGCCTTGTTCAT+GGG + chr5.2:28323955-28323974 None:intergenic 40.0%
!! TTGGTGGGTTTATCTTCTTC+AGG + chr5.2:28321292-28321311 None:intergenic 40.0%
!! TTTGAGTTCAGCCTTGTTCA+TGG + chr5.2:28323956-28323975 None:intergenic 40.0%
!! TTTGATGATGGCATGATGCT+GGG - chr5.2:28322984-28323003 MS.gene032779:intron 40.0%
!!! GGTTTTGAATTCGAGTTTGC+CGG - chr5.2:28323356-28323375 MS.gene032779:intron 40.0%
!!! TGTGAGTGCTTTGTTTTCGA+TGG + chr5.2:28324000-28324019 None:intergenic 40.0%
AAACTCACACACACAAGTGG+AGG + chr5.2:28324882-28324901 None:intergenic 45.0%
AAAGGGAAGTCACAGAGGAT+AGG + chr5.2:28326936-28326955 None:intergenic 45.0%
AATTCTGGTCAACTAGGCCA+TGG - chr5.2:28325906-28325925 MS.gene032779:intron 45.0%
ACCATTTGAGCTGCAACTAC+GGG + chr5.2:28325611-28325630 None:intergenic 45.0%
AGAGACAGAGACAGTTGTTG+AGG + chr5.2:28324205-28324224 None:intergenic 45.0%
AGATCTCGAATCGTGACTTG+AGG + chr5.2:28321378-28321397 None:intergenic 45.0%
AGCATGGTCAACTAGGGTTA+GGG - chr5.2:28327498-28327517 MS.gene032779:CDS 45.0%
AGCGGATATTCATCAATCCG+AGG + chr5.2:28323898-28323917 None:intergenic 45.0%
AGGGGAAATTCTGGTCAACT+AGG - chr5.2:28325900-28325919 MS.gene032779:intron 45.0%
AGGGGAGGTTTATATGCTTG+GGG - chr5.2:28326993-28327012 MS.gene032779:intron 45.0%
ATCTTTGTTCCATCAAGGCC+AGG + chr5.2:28327323-28327342 None:intergenic 45.0%
ATGGATCATCTATTGCGGGA+CGG - chr5.2:28324574-28324593 MS.gene032779:CDS 45.0%
CAACAGATCCTCTAGCAATG+TGG - chr5.2:28322383-28322402 MS.gene032779:CDS 45.0%
CCGGTAAGTGATGTAACCAA+CGG + chr5.2:28321437-28321456 None:intergenic 45.0%
CGATATTCGGTACTTCCTTC+TGG - chr5.2:28327067-28327086 MS.gene032779:intron 45.0%
CGTTATCCTGACACATGTGT+CGG - chr5.2:28326393-28326412 MS.gene032779:CDS 45.0%
CTCGTATTATGTGTCCTCCT+AGG - chr5.2:28322102-28322121 MS.gene032779:intron 45.0%
GAAGATCACTAAGCACTCCA+AGG + chr5.2:28327026-28327045 None:intergenic 45.0%
GAAGGGGAGGTTTATATGCT+TGG - chr5.2:28326991-28327010 MS.gene032779:intron 45.0%
GATGGTTCCTTTGGTCAACT+TGG - chr5.2:28326167-28326186 MS.gene032779:intron 45.0%
GATTCAGGCGAATTGAAGGA+AGG + chr5.2:28322890-28322909 None:intergenic 45.0%
GCTGGAACAGATGGTCAATT+AGG - chr5.2:28324151-28324170 MS.gene032779:intron 45.0%
GGGTAATTACGACCCATACT+TGG + chr5.2:28325522-28325541 None:intergenic 45.0%
GTGGGTTTATCTTCTTCAGG+CGG + chr5.2:28321289-28321308 None:intergenic 45.0%
TCCAAACGAAGGATCATGAC+CGG + chr5.2:28321491-28321510 None:intergenic 45.0%
TCCCTAATCATGGTGACTTC+GGG + chr5.2:28323271-28323290 None:intergenic 45.0%
TCTTTGTTCCATCAAGGCCA+GGG + chr5.2:28327322-28327341 None:intergenic 45.0%
TTACTTCCCTCCAAAGACAC+CGG + chr5.2:28323378-28323397 None:intergenic 45.0%
TTCATAACCCATGTCTCTGC+TGG - chr5.2:28325984-28326003 MS.gene032779:intron 45.0%
TTTGTGTATAGGTGAAGGGG+AGG - chr5.2:28326978-28326997 MS.gene032779:intron 45.0%
! AAGGCATTATCATGGGGTAG+GGG - chr5.2:28325882-28325901 MS.gene032779:intron 45.0%
! CCGTTGGTTACATCACTTAC+CGG - chr5.2:28321434-28321453 MS.gene032779:intron 45.0%
! CGTACGAAGTACGTGTTTTG+TGG - chr5.2:28324020-28324039 MS.gene032779:intron 45.0%
! TGATGGACATCTGTACACCT+GGG - chr5.2:28326767-28326786 MS.gene032779:intron 45.0%
! TTGATGGACATCTGTACACC+TGG - chr5.2:28326766-28326785 MS.gene032779:intron 45.0%
! TTGTCAGCCTTTGAGAGTAG+AGG - chr5.2:28325272-28325291 MS.gene032779:intron 45.0%
! TTTTCTCTCATGTGGATGGG+CGG - chr5.2:28322188-28322207 MS.gene032779:intron 45.0%
!! CAGATGGGAAGGCATTATCA+TGG - chr5.2:28325874-28325893 MS.gene032779:intron 45.0%
!! GAAGGCATTATCATGGGGTA+GGG - chr5.2:28325881-28325900 MS.gene032779:intron 45.0%
!! GATGGGAAGGCATTATCATG+GGG - chr5.2:28325876-28325895 MS.gene032779:intron 45.0%
!! GGAAGGAGTTGGTAAGAACA+AGG - chr5.2:28322408-28322427 MS.gene032779:intron 45.0%
!! GTACCGAATATCGACTTAGC+TGG + chr5.2:28327060-28327079 None:intergenic 45.0%
!!! GGCCACTCAAGTTTTGTTTC+AGG - chr5.2:28326011-28326030 MS.gene032779:intron 45.0%
!! TATATCTTAAAAATAATTTA+TGG - chr5.2:28325168-28325187 MS.gene032779:intron 5.0%
!!! AATACTATATTTTTTTTTTT+TGG + chr5.2:28325026-28325045 None:intergenic 5.0%
!!! TTTTTAAAACATTATAATTA+AGG - chr5.2:28322072-28322091 MS.gene032779:intron 5.0%
!!! TTTTTAACTTTAATATTAAA+AGG - chr5.2:28327150-28327169 MS.gene032779:intron 5.0%
AAACGAAGGATCATGACCGG+CGG + chr5.2:28321488-28321507 None:intergenic 50.0%
ACTGGGTGCTTGTTCACTTG+TGG - chr5.2:28326143-28326162 MS.gene032779:intron 50.0%
ACTTGTGGGGATGGTTCCTT+TGG - chr5.2:28326158-28326177 MS.gene032779:intron 50.0%
AGATCCTCTAGCAATGTGGC+GGG - chr5.2:28322387-28322406 MS.gene032779:CDS 50.0%
AGATTATGGAGTTGGGGTGC+TGG - chr5.2:28324133-28324152 MS.gene032779:intron 50.0%
AGTTTGCCGGTGTCTTTGGA+GGG - chr5.2:28323369-28323388 MS.gene032779:intron 50.0%
ATCATCTATTGCGGGACGGA+GGG - chr5.2:28324578-28324597 MS.gene032779:CDS 50.0%
CAACTAGGGTTAGGGGATGA+TGG - chr5.2:28327506-28327525 MS.gene032779:CDS 50.0%
CACTTACCGGACCAAAGACT+CGG - chr5.2:28321447-28321466 MS.gene032779:intron 50.0%
CAGATACCGACACATGTGTC+AGG + chr5.2:28326402-28326421 None:intergenic 50.0%
CAGATCCTCTAGCAATGTGG+CGG - chr5.2:28322386-28322405 MS.gene032779:CDS 50.0%
CATGTCATCGCCTTAACCTC+TGG - chr5.2:28324259-28324278 MS.gene032779:intron 50.0%
CATGTTGCACAGGTAGCATG+TGG - chr5.2:28326248-28326267 MS.gene032779:intron 50.0%
CCCCGAAGTCACCATGATTA+GGG - chr5.2:28323267-28323286 MS.gene032779:intron 50.0%
CCCTAATCATGGTGACTTCG+GGG + chr5.2:28323270-28323289 None:intergenic 50.0%
CTGGGTGCTTGTTCACTTGT+GGG - chr5.2:28326144-28326163 MS.gene032779:intron 50.0%
CTTTGTTCCATCAAGGCCAG+GGG + chr5.2:28327321-28327340 None:intergenic 50.0%
GAGCATGGTCAACTAGGGTT+AGG - chr5.2:28327497-28327516 MS.gene032779:CDS 50.0%
GAGCATTCTGTCCTTGTCAC+AGG - chr5.2:28327365-28327384 MS.gene032779:CDS 50.0%
GAGTCAGTGACGGTGAAGTA+TGG - chr5.2:28321642-28321661 MS.gene032779:intron 50.0%
GAGTCTCTCTCCCATGAACA+AGG - chr5.2:28323942-28323961 MS.gene032779:intron 50.0%
GATCACTAAGCACTCCAAGG+TGG + chr5.2:28327023-28327042 None:intergenic 50.0%
GATGGACATCTGTACACCTG+GGG - chr5.2:28326768-28326787 MS.gene032779:intron 50.0%
GCATGGTCAACTAGGGTTAG+GGG - chr5.2:28327499-28327518 MS.gene032779:CDS 50.0%
GCCAGTTGAGCTAAGACTTG+CGG + chr5.2:28324805-28324824 None:intergenic 50.0%
GGCATCCGGCCTAACAATTT+CGG + chr5.2:28324835-28324854 None:intergenic 50.0%
GGGGAGGTTTATATGCTTGG+GGG - chr5.2:28326994-28327013 MS.gene032779:intron 50.0%
GGTTTATCTTCTTCAGGCGG+CGG + chr5.2:28321286-28321305 None:intergenic 50.0%
GTCAAAGCTTGTGAGAGCTG+AGG - chr5.2:28322444-28322463 MS.gene032779:intron 50.0%
GTCTGGTGTGCATCATGTGT+CGG - chr5.2:28326357-28326376 MS.gene032779:CDS 50.0%
TAACCCATGTCTCTGCTGGT+TGG - chr5.2:28325988-28326007 MS.gene032779:intron 50.0%
TCATGGGGTAGGGGAAATTC+TGG - chr5.2:28325891-28325910 MS.gene032779:intron 50.0%
TCCCCGAAGTCACCATGATT+AGG - chr5.2:28323266-28323285 MS.gene032779:intron 50.0%
TCCCGTAGTTGCAGCTCAAA+TGG - chr5.2:28325607-28325626 MS.gene032779:intron 50.0%
TCCGCAAGTCTTAGCTCAAC+TGG - chr5.2:28324801-28324820 MS.gene032779:intron 50.0%
TCCTTTGGTCAACTTGGGCA+TGG - chr5.2:28326173-28326192 MS.gene032779:intron 50.0%
TCTGGTAAGCGTGGTCAGTT+GGG - chr5.2:28326476-28326495 MS.gene032779:intron 50.0%
TCTGTCTCTTCACTTGCCTG+TGG - chr5.2:28324229-28324248 MS.gene032779:intron 50.0%
TGCTTGTTCACTTGTGGGGA+TGG - chr5.2:28326149-28326168 MS.gene032779:intron 50.0%
TGGGTGCTTGTTCACTTGTG+GGG - chr5.2:28326145-28326164 MS.gene032779:intron 50.0%
! AACCCATGTCTCTGCTGGTT+GGG - chr5.2:28325989-28326008 MS.gene032779:intron 50.0%
! ACACACACAAGTGGAGGTAC+CGG + chr5.2:28324876-28324895 None:intergenic 50.0%
! ACCATGCCCAAGTTGACCAA+AGG + chr5.2:28326177-28326196 None:intergenic 50.0%
! TTCGAGTTTGCCGGTGTCTT+TGG - chr5.2:28323365-28323384 MS.gene032779:intron 50.0%
! TTTGAAGTCGTGGCGGGAAA+AGG + chr5.2:28321245-28321264 None:intergenic 50.0%
!! GGAAGGCATTATCATGGGGT+AGG - chr5.2:28325880-28325899 MS.gene032779:intron 50.0%
ACCTGGGGAAGAGGCTTCAA+GGG - chr5.2:28326783-28326802 MS.gene032779:intron 55.0%
ATCGATACGGATGCGGGAGA+TGG + chr5.2:28321407-28321426 None:intergenic 55.0%
CAACGGCGTCACGATCGATA+CGG + chr5.2:28321420-28321439 None:intergenic 55.0%
CATCTGTACACCTGGGGAAG+AGG - chr5.2:28326774-28326793 MS.gene032779:intron 55.0%
CGAATCGTGACTTGAGGTCG+AGG + chr5.2:28321372-28321391 None:intergenic 55.0%
CGTCACGATCGATACGGATG+CGG + chr5.2:28321414-28321433 None:intergenic 55.0%
CTACGGTGGACCACGTTGAT+AGG + chr5.2:28325546-28325565 None:intergenic 55.0%
CTCTGGTAAGCGTGGTCAGT+TGG - chr5.2:28326475-28326494 MS.gene032779:intron 55.0%
GAGTTTGCCGGTGTCTTTGG+AGG - chr5.2:28323368-28323387 MS.gene032779:intron 55.0%
GATCATCTATTGCGGGACGG+AGG - chr5.2:28324577-28324596 MS.gene032779:CDS 55.0%
GCCAATTTGGAGAAAGCCCC+TGG - chr5.2:28327302-28327321 MS.gene032779:intron 55.0%
GCCAGGGGCTTTCTCCAAAT+TGG + chr5.2:28327306-28327325 None:intergenic 55.0%
GCCGGTCATGATCCTTCGTT+TGG - chr5.2:28321487-28321506 MS.gene032779:CDS 55.0%
GGGGTGAGCATGGTCAACTA+GGG - chr5.2:28327492-28327511 MS.gene032779:CDS 55.0%
GTCACGATCGATACGGATGC+GGG + chr5.2:28321413-28321432 None:intergenic 55.0%
GTCTCTTCACTTGCCTGTGG+CGG - chr5.2:28324232-28324251 MS.gene032779:intron 55.0%
TCGTGACTTGAGGTCGAGGA+CGG + chr5.2:28321368-28321387 None:intergenic 55.0%
TGGGGTGAGCATGGTCAACT+AGG - chr5.2:28327491-28327510 MS.gene032779:CDS 55.0%
TGGTCAACTAGGCCATGGAG+AGG - chr5.2:28325911-28325930 MS.gene032779:intron 55.0%
TTATCTTCTTCAGGCGGCGG+TGG + chr5.2:28321283-28321302 None:intergenic 55.0%
! AAGTCGTGGCGGGAAAAGGA+GGG + chr5.2:28321241-28321260 None:intergenic 55.0%
! ACCCATGTCTCTGCTGGTTG+GGG - chr5.2:28325990-28326009 MS.gene032779:intron 55.0%
! GGTGGACCACGTTGATAGGT+GGG + chr5.2:28325542-28325561 None:intergenic 55.0%
! TGAGAGCTGAGGTACCTCTG+AGG - chr5.2:28322455-28322474 MS.gene032779:intron 55.0%
!! ACACACAAGTGGAGGTACCG+GGG + chr5.2:28324874-28324893 None:intergenic 55.0%
!! ACTATAGACGGTGTCGTGCC+CGG - chr5.2:28322011-28322030 MS.gene032779:CDS 55.0%
!! AGTTGGGGTGCTGGAACAGA+TGG - chr5.2:28324142-28324161 MS.gene032779:intron 55.0%
!! CACACACAAGTGGAGGTACC+GGG + chr5.2:28324875-28324894 None:intergenic 55.0%
!! GGATTTGGCTCTGGTAAGCG+TGG - chr5.2:28326467-28326486 MS.gene032779:CDS 55.0%
ACATGGGGTTGGGGTGAGCA+TGG - chr5.2:28327482-28327501 MS.gene032779:CDS 60.0%
ATGATGACCACCGCAGACGG+CGG + chr5.2:28321325-28321344 None:intergenic 60.0%
ATGCTTGGGGGCAACCACCT+TGG - chr5.2:28327006-28327025 MS.gene032779:intron 60.0%
CACCTGGGGAAGAGGCTTCA+AGG - chr5.2:28326782-28326801 MS.gene032779:intron 60.0%
CCCATGATGACCACCGCAGA+CGG + chr5.2:28321328-28321347 None:intergenic 60.0%
CCGTCTGCGGTGGTCATCAT+GGG - chr5.2:28321325-28321344 MS.gene032779:CDS 60.0%
CCTCTTCCATGCCTCCTCAG+AGG + chr5.2:28322472-28322491 None:intergenic 60.0%
CCTTCCCGCCACATTGCTAG+AGG + chr5.2:28322394-28322413 None:intergenic 60.0%
CGAGGACGGAGCAGTCGATA+GGG + chr5.2:28321354-28321373 None:intergenic 60.0%
CGTCTGCCGAGTCTTTGGTC+CGG + chr5.2:28321456-28321475 None:intergenic 60.0%
GCCCCAACCAGCAGAGACAT+GGG + chr5.2:28325994-28326013 None:intergenic 60.0%
GTTAGGCCGGATGCCATGAC+CGG - chr5.2:28324840-28324859 MS.gene032779:intron 60.0%
TCGAGGACGGAGCAGTCGAT+AGG + chr5.2:28321355-28321374 None:intergenic 60.0%
TTAGGCCGGATGCCATGACC+GGG - chr5.2:28324841-28324860 MS.gene032779:intron 60.0%
! ACGGCGTTTGAAGTCGTGGC+GGG + chr5.2:28321251-28321270 None:intergenic 60.0%
! CCTCTAGCAATGTGGCGGGA+AGG - chr5.2:28322391-28322410 MS.gene032779:CDS 60.0%
! CCTCTGAGGAGGCATGGAAG+AGG - chr5.2:28322469-28322488 MS.gene032779:intron 60.0%
! CGGTGGACCACGTTGATAGG+TGG + chr5.2:28325543-28325562 None:intergenic 60.0%
! CGTATCGATCGTGACGCCGT+TGG - chr5.2:28321418-28321437 MS.gene032779:intron 60.0%
! GAAGTCGTGGCGGGAAAAGG+AGG + chr5.2:28321242-28321261 None:intergenic 60.0%
! GACGGCGTTTGAAGTCGTGG+CGG + chr5.2:28321252-28321271 None:intergenic 60.0%
! GAGCTGAGGTACCTCTGAGG+AGG - chr5.2:28322458-28322477 MS.gene032779:intron 60.0%
! GAGGTACCTCTGAGGAGGCA+TGG - chr5.2:28322463-28322482 MS.gene032779:intron 60.0%
! GCAATGTGGCGGGAAGGAGT+TGG - chr5.2:28322397-28322416 MS.gene032779:intron 60.0%
!! GAGAAAGCCCCTGGCCTTGA+TGG - chr5.2:28327311-28327330 MS.gene032779:intron 60.0%
AGGATCATGACCGGCGGCGA+TGG + chr5.2:28321482-28321501 None:intergenic 65.0%
ATCATGACCGGCGGCGATGG+CGG + chr5.2:28321479-28321498 None:intergenic 65.0%
CATGACCGGGGTTCGAACCC+CGG - chr5.2:28324854-28324873 MS.gene032779:intron 65.0%
CGAACCCCGGTCATGGCATC+CGG + chr5.2:28324849-28324868 None:intergenic 65.0%
CTTCAGGCGGCGGTGGAAGT+GGG + chr5.2:28321276-28321295 None:intergenic 65.0%
GCCCTTGAAGCCTCTTCCCC+AGG + chr5.2:28326787-28326806 None:intergenic 65.0%
GCCGTCTGCGGTGGTCATCA+TGG - chr5.2:28321324-28321343 MS.gene032779:CDS 65.0%
GGATGGGCGGTCATCCGATC+CGG - chr5.2:28322201-28322220 MS.gene032779:intron 65.0%
GGCCCCAACCAGCAGAGACA+TGG + chr5.2:28325995-28326014 None:intergenic 65.0%
TAGGCCGGATGCCATGACCG+GGG - chr5.2:28324842-28324861 MS.gene032779:intron 65.0%
TCTTCAGGCGGCGGTGGAAG+TGG + chr5.2:28321277-28321296 None:intergenic 65.0%
! GATGACATGAGCGCCGCCAC+AGG + chr5.2:28324248-28324267 None:intergenic 65.0%
! GGCGACGGCGTTTGAAGTCG+TGG + chr5.2:28321255-28321274 None:intergenic 65.0%
!! AGGTACCGGGGTTCGAACCC+CGG + chr5.2:28324862-28324881 None:intergenic 65.0%
ACCACCGCAGACGGCGGTGT+TGG + chr5.2:28321319-28321338 None:intergenic 70.0%
CCACCGCAGACGGCGGTGTT+GGG + chr5.2:28321318-28321337 None:intergenic 70.0%
CGGGGTTCGAACCCCGGTCA+TGG + chr5.2:28324856-28324875 None:intergenic 70.0%
GGCGGCGTCTGCCGAGTCTT+TGG + chr5.2:28321461-28321480 None:intergenic 70.0%
! AGACGGCGGTGTTGGGCGCT+TGG + chr5.2:28321311-28321330 None:intergenic 70.0%
! GGCGGTGTTGGGCGCTTGGT+GGG + chr5.2:28321307-28321326 None:intergenic 70.0%
CCCAACACCGCCGTCTGCGG+TGG - chr5.2:28321315-28321334 MS.gene032779:CDS 75.0%
GCGCCCAACACCGCCGTCTG+CGG - chr5.2:28321312-28321331 MS.gene032779:CDS 75.0%
GCGGCGGTGGAAGTGGGCGA+CGG + chr5.2:28321270-28321289 None:intergenic 75.0%
! CGGCGGTGTTGGGCGCTTGG+TGG + chr5.2:28321308-28321327 None:intergenic 75.0%
! GCAGACGCCGCCATCGCCGC+CGG - chr5.2:28321469-28321488 MS.gene032779:intron 80.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 28321217 28327637 28321217 ID=MS.gene032779
chr5.2 mRNA 28321217 28327637 28321217 ID=MS.gene032779.t1;Parent=MS.gene032779
chr5.2 exon 28327323 28327637 28327323 ID=MS.gene032779.t1.exon1;Parent=MS.gene032779.t1
chr5.2 CDS 28327323 28327637 28327323 ID=cds.MS.gene032779.t1;Parent=MS.gene032779.t1
chr5.2 exon 28326249 28326487 28326249 ID=MS.gene032779.t1.exon2;Parent=MS.gene032779.t1
chr5.2 CDS 28326249 28326487 28326249 ID=cds.MS.gene032779.t1;Parent=MS.gene032779.t1
chr5.2 exon 28324574 28324803 28324574 ID=MS.gene032779.t1.exon3;Parent=MS.gene032779.t1
chr5.2 CDS 28324574 28324803 28324574 ID=cds.MS.gene032779.t1;Parent=MS.gene032779.t1
chr5.2 exon 28322822 28322977 28322822 ID=MS.gene032779.t1.exon4;Parent=MS.gene032779.t1
chr5.2 CDS 28322822 28322977 28322822 ID=cds.MS.gene032779.t1;Parent=MS.gene032779.t1
chr5.2 exon 28322555 28322713 28322555 ID=MS.gene032779.t1.exon5;Parent=MS.gene032779.t1
chr5.2 CDS 28322555 28322713 28322555 ID=cds.MS.gene032779.t1;Parent=MS.gene032779.t1
chr5.2 exon 28322243 28322410 28322243 ID=MS.gene032779.t1.exon6;Parent=MS.gene032779.t1
chr5.2 CDS 28322243 28322410 28322243 ID=cds.MS.gene032779.t1;Parent=MS.gene032779.t1
chr5.2 exon 28321957 28322088 28321957 ID=MS.gene032779.t1.exon7;Parent=MS.gene032779.t1
chr5.2 CDS 28321957 28322088 28321957 ID=cds.MS.gene032779.t1;Parent=MS.gene032779.t1
chr5.2 exon 28321779 28321865 28321779 ID=MS.gene032779.t1.exon8;Parent=MS.gene032779.t1
chr5.2 CDS 28321779 28321865 28321779 ID=cds.MS.gene032779.t1;Parent=MS.gene032779.t1
chr5.2 exon 28321475 28321563 28321475 ID=MS.gene032779.t1.exon9;Parent=MS.gene032779.t1
chr5.2 CDS 28321475 28321563 28321475 ID=cds.MS.gene032779.t1;Parent=MS.gene032779.t1
chr5.2 exon 28321217 28321387 28321217 ID=MS.gene032779.t1.exon10;Parent=MS.gene032779.t1
chr5.2 CDS 28321217 28321387 28321217 ID=cds.MS.gene032779.t1;Parent=MS.gene032779.t1
Gene Sequence

>MS.gene032779

ATGAGTCGCAAGAGAGAGAATCCCTCCTTTTCCCGCCACGACTTCAAACGCCGTCGCCCACTTCCACCGCCGCCTGAAGAAGATAAACCCACCAAGCGCCCAACACCGCCGTCTGCGGTGGTCATCATGGGTCTCCCTATCGACTGCTCCGTCCTCGACCTCAAGTCACGATTCGAGATCTACGGCTCCATCTCCCGCATCCGTATCGATCGTGACGCCGTTGGTTACATCACTTACCGGACCAAAGACTCGGCAGACGCCGCCATCGCCGCCGGTCATGATCCTTCGTTTGGAGTCACTGTTAATTCTAAAAAGGTTCTTGCTTTTTCTTTTGTTTCTTTTTATCTAGGGTTTTTGAATTTGCATTTGAATTGGTGCAGTTTCGTTGTTTGAATTGAAAAGTTCAAATTTTTGTAATTGATAGTGAGTCAGTGACGGTGAAGTATGGAATCAAAATTAATTGACAAATTTTCAGCTTAATTTTTTAGGGTATAGTTAAAATTTGAAGCTTTGCAGTTAAAGACAACTACAATAAAACCCGAAATAGAACAAAGTGTAACATTTTCTACCTAATTATGTTAAAATTTGGTGAAAGTTTGTAACTTCAAGTTAAGGACAACAATGGGGTAATGTTTCAAAGATGAAGATGTGGAACTCTGTTTTTTATGTTAACCACCGTGATTAGTAACGTTTTAAAAACCGAGCCGATGATCAATATGATGAGACAATTGCATCAGAGTTAACTGATTTGATCAACTTGAACTAAGAACAAAACCAACCACACAAATAACTGAACTATAGACGGTGTCGTGCCCGGTCTACATTCAACATGTTGAACCATTAGGTTTGGTTTCATTTTTAAAACATTATAATTAAGGTGTTTAACTCGTATTATGTGTCCTCCTAGGGTATGTTAATTGCTTAGGCTCGTTATGGTACTAATCTGCGGGTCGATAATTGAATGTTTGTTTTTTTCTCTCATGTGGATGGGCGGTCATCCGATCCGGCATTTCCATGTATAAAACTCTCGGGGATTGTTATGTTACCTTCTCTATACATACATGCTTAGTTTGTTTAATCAATGAATTGCAATTTTAGTACTTCATTAAGGAAAATACAGAAGAATGACATTGGTGTATGTGTGTAACAGGTTCAGGTATTGTGGGCAACAGATCCTCTAGCAATGTGGCGGGAAGGAGTTGGTAAGAACAAGGATAACGTGTCTATGTCAAAGCTTGTGAGAGCTGAGGTACCTCTGAGGAGGCATGGAAGAGGTAATAGACTTGCTTCAGCTATAGGGAAAACCAAAAGTAGTGAGGATGGTTCTGGTAGCTCAGTTCTTGAAGTTCCTTTCAAGGGCAGAGAAATTGTTGCTTATGATGATCTCTTGTAATTCTGAAAATCAATATTTTATTTTATTTTTCTTTTTCCATATGGTTAACTTATTTTGTATCAATGTTTTGATAACACTTTGAATTTAGGGTTTAGATCTACGCTAGTTCTTTTTTCATATAAGTTAATTATGTAATTTAGTTTGTGGTTTTTGATGTTTGATGTCTACATTAGAAATATAATTTGGTAAATAGTTGGTTTAACTTATGTTGTTTTCTCAACTATTTGGATTTGAAATTGGAAGATATTCTCTGATTGCTGAAGAAACCATTTTACTTCCTTCCTTCAATTCGCCTGAATCTACTGTTTTGCGTCATGACATTTTGTGGTCATTCATTAGTTACAAGTTTGATTTGGGCAAGGTTTATTTGAGTATTTGATGATGGCATGATGCTGGGAACACTTTTATAGATTGTGTAATCAGTGATTCAAATGTATGCACGACTTAAAAGTTCTTCATCTATTTATAACATTAAGCATTAAGCTATAGTTTCTCTCCAAACAAAAAACATTATGCTATTGTTTGTGGACCTATGAAATAAAGCAACACATAGATAAAAATTGTTTTTTATTTTTGTCACTGCAGTTCATTGTAGAATCACACACAGTGGGAATTCACTTCTTCTAATATTTTATAAAAAAAATCAATGAGTTGCGTCCCCGAAGTCACCATGATTAGGGAAATTTCTAACGCTTAGAGTAATTATAAAATTTGCATAAATATCATTTCATTGAATAACATTCATAGGTTTTGAATTCGAGTTTGCCGGTGTCTTTGGAGGGAAGTAAAATATAATCTTTAAACTAAGAGGTTTTCCTACCTTAGACTTAGGTATCATCTTTAAACCCTAAAATTGTCATAAATATATATATGTATTTTTTTTTTTTTGAGGAAATAATATATATGTATTGTTAGTAAACTCAAATAGCTTGCCTGAAGTATAATTTCAACAAATCATGTCAAAATAGTAGAGTTTAAATACATACTAACTTCGATCACGGTTATAAACAAATATTTTGGATACATCAATTATTTACGGTAACTTCGATCACGGTTATAAACAAATATTTTGGATACATCAATTATTTACGGATATTGAAAATAATATTTGCTTAAAATAGTGATCCGAATAAGCTAACTAATTCCTTTTTATTTCTATCCGTTAGTGTTTTCAAGAGAGATAAATGATTTGGGATAATTGAGTAAAAAAATAGATTTAGGAGGAGCAATTGATTTCGAAAAACAGATTTCCCATTTTTTTTTTTCTCAATAAAAGAACAAGGATCCTCGGATTGATGAATATCCGCTAAACACTACAAAGTTGAAAAACAGGAGTCTCTCTCCCATGAACAAGGCTGAACTCAAAACTGGTACTTATTCGTACTTTCCATCGAAAACAAAGCACTCACACGTACGAAGTACGTGTTTTGTGGGATAACAGACAGAACAGAACAGAAAGTGAAAGTAGATTGATGGAAGAAAGTGAACAAGTGAAAACTGACGAGAAAGAAGAATCAGAAGAAAGATTATGGAGTTGGGGTGCTGGAACAGATGGTCAATTAGGAACAGGTAAGCTTCAAGATGAACAACTTCCTCAACAACTGTCTCTGTCTCTGCTCTCTGTCTCTTCACTTGCCTGTGGCGGCGCTCATGTCATCGCCTTAACCTCTGGTTAGTTAGTACATATCAATTTCCCAATATACAACACTTTTGTTTTATGTTGTACTATTCTATTTAATTACTCCGTCCCATAATACTTGACACAGTTCCCTATTACGCATGTCAATGCACAATTTTGAGCTTAAATATCTTAAATAATATATTATAAAAAATTATGAAAATTTGATATTTTGAAAATACTCATCGAGACAAATCTAACGACATCTTATATGATATTATTTATCTTTGTATATTAGTAGAAAAATATGGTCAAAGTAAATTAGGTCAACATTACACATTTTCAAATGGATCATCTATTGCGGGACGGAGGGAGTAACATATAATAGAATTTTGATTTTATTTCTCTAATATAATGAAATTACATGTGTAAAAAATTTGTCTTTTATTGAATGAGAAACTCACATCTACCATTTGAGTTGTACTTAATTGTCAAAAAATAATATTGAACTGTACTTGCATGATTTTTTTTGCTGGCTTTGTTCTTTGAAATATAAATATAGTATTGCTTTTATCCGCAAGTCTTAGCTCAACTGGCAAAAATGCCGAAATTGTTAGGCCGGATGCCATGACCGGGGTTCGAACCCCGGTACCTCCACTTGTGTGTGTGAGTTTATAATGGCTTTGCCATTTCGTCTATCTATCAAAAAAAATAAATACAGTATTGCTTTTTTCCCTTCTCAAACCTCTACTTGTGTGTGTGTGTTTATAATGGCTTTGCCATTTCGTCTATCTACCAAAAAAAAAAAATATAGTATTGCTTTTTTCCCTTCTCAAAAAATAAAAAATATTATACAGTAGATAAATAGAATATCTTTTACATATCAAGAAAATTTTGTGGGATAAGTCATATATATTAACACAAATATTATTAAGTTCTATATATCTTAAAAATAATTTATGGATTAATGGTGAAGTATTTTGATAGGTGGTCTATCGTGGACTATTATTTGAAAATTGTTTGAAACTTCAATGATGGTCGACATTGTCAGCCTTTGAGAGTAGAGGTTTAAGATGTGTCAAAACATTTAAGACAGTGACTTGATGGGTATAAGTTTGGCAAAAACAAGATAAAATAGATATGTTGACTTTAAAATTCAACTCGTAATTGTTTTCTCGTTTTGTCAAATCGACACCGATCAACTCATTGTTTAAGTTGTGATGACCAATAGGACCATTATTTACTACTTCTAACATACGACTTTAGTCATCGTTAGTCTTTTGAACAATTTCCAAGTATGGGTCGTAATTACCCACCTATCAACGTGGTCCACCGTAGAAATAACCTAAAAATATAGTGATTTTGGAAAAAGTAATTTGTCCCGTAGTTGCAGCTCAAATGGTAAAAGTTGTGAGGGACATTGATTTGTTGGAGTGCGGGTTCAAACATGTAATACTCTACTTCACATTTAGTGTGCGTGAGTTTCGTCGCTAAGTTATTTGGAAGAAAAAAAAAATAAAAATAATTTATGGCAGTCAAAATCAGAATTTGCCCAATACAAAATATCAAAATGTTTTTAAATTATTTTTGTTAACTTTTTCTTGATTCTCACTTTGTATATTCAAAACTATAAAAAAAAAAAAATGCAGATGGGAAGGCATTATCATGGGGTAGGGGAAATTCTGGTCAACTAGGCCATGGAGAGGATGTCAATAACATGCTGTATCCCAAGGCTATAACATCATTGGACAACTGCTTCATAACCCATGTCTCTGCTGGTTGGGGCCACTCAAGTTTTGTTTCAGGTTTGCATCTTTGTCTTCAATATGTGCTTCTAAAATGAATAGTTGAGGTTAGTTTTTTTGTTGAAAATTGATTACCTTTGTCTTTTCTTGTTCTTGTTTGGTTTCTAGATACTGGGTGCTTGTTCACTTGTGGGGATGGTTCCTTTGGTCAACTTGGGCATGGTGATTATGCTTCACATAGTTCACCCATCAAAGTGTCATCTTTTGTTGATCAACATGTTGCACAGGTAGCATGTGGAATGCGCCATTCTATTGTCTTGTTGAAAGGTATTGGATTGATAAAAGTTAGTTCTCAGTTTGTTGAAAGGTATTAGATTGAGGCATGTCTGGTGTGCATCATGTGTCGGTATCTGACACTATCGTTATCCTGACACATGTGTCGGTATCTGACACTTTAGATTGATGATGCAGGCTGTCTTTCAAATCAAGTTTATGGATTTGGCTCTGGTAAGCGTGGTCAGTTGGGTGTCTCCAAAGATAAAATAAAATCTATTAATCTTCCTAAAGTTACTAGTGGATTTGAAGATGAGGAAATAGTTGGAATTTCTGCAAACGGAGATCATAGTGCTGCATTATCTGGTAAATCCATCACTTCTTACCTTGCATTATATGTGATTCACATTTCTCTTAATAAACAAGATAAATCAAGTCACCTGGATGTGAAATTCAAAAAATTACATTATATTCTTTTCTAAAATATCCATTATCTCTCTATTGGTTGTTTTTGCATCAGTTGATGGACATCTGTACACCTGGGGAAGAGGCTTCAAGGGCTATGAAGATTCACACCTTCCACAATGCTTAAACTCTACGTCGAAATTTACTAAAGTCACTCTAGGGTGGAACCATGCTTTAGCTATGACTGGTATTTATTGACACTACACCAAAGTTTCATGATTTCCTATCCTCTGTGACTTCCCTTTTGAATGAATTTTGTTTGTTAAATTTGTGTATAGGTGAAGGGGAGGTTTATATGCTTGGGGGCAACCACCTTGGAGTGCTTAGTGATCTTCACAATGCAAGACCAGCTAAGTCGATATTCGGTACTTCCTTCTGGACTTAATTGTAAACAAAAATATTTTCACACATTTAGAACACTAATCGAATGCATTTAATATTTTTAACTTTAATATTAAAAGGAAATACATTAATTATAATGACCACCCCTTAAAAAATTTCTGCTGTCACCACAAATGTTTCAGAGTTTCATATTACTAGATAAGACTTTTCTGAAGTGAACTTATTTATCATGTAATAGATTCAAGAGAAGCCAATTTGGAGAAAGCCCCTGGCCTTGATGGAACAAAGATTACTGATATTGCTACTGGAGCTGAGCATTCTGTCCTTGTCACAGGCAAGATATAGTTTTCTTATACCTAAGCAAGTTGACAATCACATTAGCATGCTGACTAATTTCTTTCTCAATATTCAGAGAATGGAGAAATAAAGACATGGGGTTGGGGTGAGCATGGTCAACTAGGGTTAGGGGATGATGGTGACCGAATCAGTCCTGTTACTGTAAATCTTGATTATGATCTGAATGAAGCTGCATCAATCAGAGTTTATTGTGGAAGTGGTTTTACGTTTGCTATAACAAAGCCATAA
Protein sequence

>MS.gene032779.t1

MSRKRENPSFSRHDFKRRRPLPPPPEEDKPTKRPTPPSAVVIMGLPIDCSVLDLKSRFEIYGSISRIRIDRDAVGYITYRTKDSADAAIAAGHDPSFGVTVNSKKVQVLWATDPLAMWREGVGKNKDNVSMSKLVRAEVPLRRHGRGNRLASAIGKTKSSEDGSGSSVLEVPFKGREIVAYDDLLQNRTESESRLMEESEQVKTDEKEESEERLWSWGAGTDGQLGTGKLQDEQLPQQLSLSLLSVSSLACGGAHVIALTSDGKALSWGRGNSGQLGHGEDVNNMLYPKAITSLDNCFITHVSAGWGHSSFVSDTGCLFTCGDGSFGQLGHGDYASHSSPIKVSSFVDQHVAQVACGMRHSIVLLKGCLSNQVYGFGSGKRGQLGVSKDKIKSINLPKVTSGFEDEEIVGISANGDHSAALSVDGHLYTWGRGFKGYEDSHLPQCLNSTSKFTKVTLGWNHALAMTGEGEVYMLGGNHLGVLSDLHNARPAKSIFDSREANLEKAPGLDGTKITDIATGAEHSVLNGEIKTWGWGEHGQLGLGDDGDRISPVTVNLDYDLNEAASIRVYCGSGFTFAITKP