Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037354.t1 | XP_003592715.1 | 99 | 773 | 8 | 0 | 1 | 773 | 1 | 773 | 0.00E+00 | 1394.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037354.t1 | Q93ZY3 | 84.1 | 769 | 116 | 3 | 8 | 773 | 13 | 778 | 0.0e+00 | 1207.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037354.t1 | G7IE81 | 99.0 | 773 | 8 | 0 | 1 | 773 | 1 | 773 | 0.0e+00 | 1394.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene037354 | MS.gene57836 | PPI |
| MS.gene037354 | MS.gene50024 | PPI |
| MS.gene037354 | MS.gene37721 | PPI |
| MS.gene037354 | MS.gene05210 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037354.t1 | MTR_1g114250 | 99.353 | 773 | 5 | 0 | 1 | 773 | 1 | 773 | 0.0 | 1571 |
| MS.gene037354.t1 | MTR_6g077750 | 52.517 | 735 | 291 | 9 | 23 | 745 | 38 | 726 | 0.0 | 726 |
| MS.gene037354.t1 | MTR_6g077750 | 50.079 | 633 | 263 | 7 | 23 | 648 | 38 | 624 | 0.0 | 585 |
| MS.gene037354.t1 | MTR_2g030440 | 49.650 | 143 | 24 | 4 | 416 | 558 | 2 | 96 | 1.94e-26 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037354.t1 | AT5G19690 | 86.216 | 769 | 100 | 3 | 8 | 773 | 13 | 778 | 0.0 | 1340 |
| MS.gene037354.t1 | AT5G19690 | 86.604 | 739 | 93 | 3 | 38 | 773 | 2 | 737 | 0.0 | 1295 |
| MS.gene037354.t1 | AT1G34130 | 51.776 | 732 | 305 | 7 | 22 | 746 | 45 | 735 | 0.0 | 732 |
Find 180 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTGGCCTTCTTACTTTA+TGG | 0.093285 | 1.3:+77514140 | MS.gene037354:CDS |
| TGAGCACTTTGCATCATTTC+TGG | 0.185711 | 1.3:+77512479 | MS.gene037354:CDS |
| CACTTTCTATCTCTATATTA+AGG | 0.191809 | 1.3:+77511368 | MS.gene037354:CDS |
| AACGGAAAACTAAACTAAAA+AGG | 0.216627 | 1.3:-77517841 | None:intergenic |
| TTTCCCCGAATCCTGTTCTT+TGG | 0.253211 | 1.3:-77517650 | None:intergenic |
| TGTATAAACTTTCATATTAC+AGG | 0.253725 | 1.3:+77516938 | MS.gene037354:CDS |
| CTTGACAGCAGCAGTTCTTC+TGG | 0.274216 | 1.3:+77510964 | MS.gene037354:CDS |
| ACAAATTAAGAAAAGGCTTT+TGG | 0.276228 | 1.3:+77514837 | MS.gene037354:CDS |
| AAATATGTTCTTGTCGTCTT+TGG | 0.281791 | 1.3:+77516544 | MS.gene037354:CDS |
| TCCTATAGGTTCACAGTGTA+TGG | 0.283509 | 1.3:+77515301 | MS.gene037354:intron |
| TATTGTCTTACTTGTGTTGC+TGG | 0.288557 | 1.3:+77514888 | MS.gene037354:CDS |
| CCAGCGGCTTGCATCTTGTC+TGG | 0.292555 | 1.3:+77514491 | MS.gene037354:CDS |
| GCTCTTGTATACTATATTAA+AGG | 0.296672 | 1.3:+77513247 | MS.gene037354:CDS |
| CCAATATCGAATTGATAATA+TGG | 0.301616 | 1.3:+77516888 | MS.gene037354:CDS |
| GAACAAATGCTTACATTAAC+AGG | 0.304740 | 1.3:-77514590 | None:intergenic |
| TTTACCAATTCAGGTTGTAT+TGG | 0.320605 | 1.3:+77512401 | MS.gene037354:intron |
| CCATATTATCAATTCGATAT+TGG | 0.321395 | 1.3:-77516888 | None:intergenic |
| AGAATGGGATATATGACTTT+TGG | 0.322168 | 1.3:+77510390 | MS.gene037354:CDS |
| CTTCCACTCCATCCCATTGT+TGG | 0.323390 | 1.3:-77513477 | None:intergenic |
| TTCCACTCCATCCCATTGTT+GGG | 0.336031 | 1.3:-77513476 | None:intergenic |
| TGTATGACTTACCAAGTAAT+CGG | 0.341627 | 1.3:-77516730 | None:intergenic |
| TTACCAATTCAGGTTGTATT+GGG | 0.344911 | 1.3:+77512402 | MS.gene037354:intron |
| TATTCTCAGCCTTTGCTTCA+TGG | 0.346243 | 1.3:+77510813 | MS.gene037354:CDS |
| TTCTCCAGAAAAGGCTGCTT+GGG | 0.355080 | 1.3:+77516498 | MS.gene037354:CDS |
| TTGTAGGAGGTTAAGGGTGC+TGG | 0.359087 | 1.3:+77510935 | MS.gene037354:intron |
| GTAGTACATGCATTGGAATA+AGG | 0.361059 | 1.3:-77511948 | None:intergenic |
| ACCTCCAAAGAACAGGATTC+GGG | 0.363455 | 1.3:+77517646 | MS.gene037354:CDS |
| CATAAAGGAACCCGATTACT+TGG | 0.377882 | 1.3:+77516719 | MS.gene037354:CDS |
| GCTGCATTGGTACCTGTTGT+TGG | 0.386627 | 1.3:+77512435 | MS.gene037354:CDS |
| CCCCGAATCCTGTTCTTTGG+AGG | 0.389569 | 1.3:-77517647 | None:intergenic |
| ATGGTTATTATTAGGATTGG+TGG | 0.397944 | 1.3:+77516629 | MS.gene037354:intron |
| TGTGATGTTAGAACGATAGA+AGG | 0.398580 | 1.3:-77515348 | None:intergenic |
| AACCTCCAAAGAACAGGATT+CGG | 0.404800 | 1.3:+77517645 | MS.gene037354:CDS |
| TAAAGTAAGAAGGCCAAGTT+GGG | 0.408489 | 1.3:-77514137 | None:intergenic |
| GAGGTTAAGGGTGCTGGAGC+TGG | 0.411374 | 1.3:+77510941 | MS.gene037354:CDS |
| TATCCCCTTGGTCGTGTAAT+CGG | 0.411602 | 1.3:+77510554 | MS.gene037354:CDS |
| GGTTAGCCATTGCAGTTGTT+TGG | 0.415001 | 1.3:-77516408 | None:intergenic |
| GTCATGTAGACGCTGAATAC+AGG | 0.417327 | 1.3:+77511764 | MS.gene037354:intron |
| AGAGTGAGGCGGACGGAGAT+TGG | 0.418608 | 1.3:+77517077 | MS.gene037354:CDS |
| ACCTCTCTCCGCCACGCATT+CGG | 0.419044 | 1.3:+77509508 | MS.gene037354:CDS |
| GTACTACTGTGCATAGTAAC+TGG | 0.420792 | 1.3:+77511964 | MS.gene037354:CDS |
| GACTGGTTACTTACCAAGTT+CGG | 0.421877 | 1.3:-77510427 | None:intergenic |
| TATGTTCTTGTCGTCTTTGG+AGG | 0.426776 | 1.3:+77516547 | MS.gene037354:CDS |
| ATTGCTTTGCTACAGGTTTG+TGG | 0.427254 | 1.3:+77517031 | MS.gene037354:intron |
| GTGGCATCTTGGTGGGATTA+CGG | 0.428437 | 1.3:+77516382 | MS.gene037354:CDS |
| ATTCTCAGCCTTTGCTTCAT+GGG | 0.429291 | 1.3:+77510814 | MS.gene037354:CDS |
| CAGCGGCTTGCATCTTGTCT+GGG | 0.432117 | 1.3:+77514492 | MS.gene037354:CDS |
| AGCAATATGAGTGTTATTCC+AGG | 0.433272 | 1.3:-77516455 | None:intergenic |
| CTATGGATGGTTCGTATTGG+AGG | 0.434774 | 1.3:+77516681 | MS.gene037354:CDS |
| TGGTTATTATTAGGATTGGT+GGG | 0.435208 | 1.3:+77516630 | MS.gene037354:intron |
| GAGTGAGGCGGACGGAGATT+GGG | 0.435397 | 1.3:+77517078 | MS.gene037354:CDS |
| CTTCTCCAGAAAAGGCTGCT+TGG | 0.438560 | 1.3:+77516497 | MS.gene037354:CDS |
| ATGAGGCAGTTAAGCATTGT+TGG | 0.439857 | 1.3:-77516916 | None:intergenic |
| GAAAAGCAAGAAGAAGGAAA+AGG | 0.442161 | 1.3:+77514786 | MS.gene037354:CDS |
| CTTTATGGATATCAATGTCT+TGG | 0.445724 | 1.3:+77514155 | MS.gene037354:CDS |
| CTGGAGCAAGTACAAGCATC+AGG | 0.448117 | 1.3:-77514472 | None:intergenic |
| TTCTTAATTTGTGCCTTGCT+AGG | 0.449491 | 1.3:-77514826 | None:intergenic |
| AGGAGAATCAACTGATAGAC+TGG | 0.449725 | 1.3:-77514570 | None:intergenic |
| CTTGTAGGTGGCATCTTGGT+GGG | 0.453018 | 1.3:+77516375 | MS.gene037354:intron |
| GGGCACACTGTTGGCTGCAT+TGG | 0.454404 | 1.3:+77512422 | MS.gene037354:CDS |
| CGGCACAACACTTTCAGAAC+TGG | 0.457312 | 1.3:-77514707 | None:intergenic |
| TGCAATGTCTTCTCCAGAAA+AGG | 0.461314 | 1.3:+77516489 | MS.gene037354:CDS |
| TCTCATGCAGGTTTGCTCGT+GGG | 0.462564 | 1.3:+77511903 | MS.gene037354:intron |
| ATTTCTTGTAGGTGGCATCT+TGG | 0.462565 | 1.3:+77516371 | MS.gene037354:intron |
| GAACTTATTAATATCATCAC+TGG | 0.463456 | 1.3:-77516658 | None:intergenic |
| TCAGTCTTCACCGTCTCATC+CGG | 0.465023 | 1.3:-77514727 | None:intergenic |
| GAAGCAAAGGCTGAGAATAT+AGG | 0.466234 | 1.3:-77510809 | None:intergenic |
| TTCTTCATTCTGATCTTGAT+CGG | 0.468540 | 1.3:+77509544 | MS.gene037354:CDS |
| TCTTGTAGGTGGCATCTTGG+TGG | 0.469040 | 1.3:+77516374 | MS.gene037354:intron |
| ATTGTCTTACTTGTGTTGCT+GGG | 0.472888 | 1.3:+77514889 | MS.gene037354:CDS |
| CCTGCTGTCAAGGTCAAACC+TGG | 0.473215 | 1.3:-77510590 | None:intergenic |
| AGTTGAAACCTCCAAAGAAC+AGG | 0.473884 | 1.3:+77517639 | MS.gene037354:CDS |
| GGGTGTATTCCCTCACATAA+AGG | 0.474448 | 1.3:+77516704 | MS.gene037354:CDS |
| CTCATGCAGGTTTGCTCGTG+GGG | 0.474775 | 1.3:+77511904 | MS.gene037354:intron |
| TTCCTATGGATGGTTCGTAT+TGG | 0.479665 | 1.3:+77516678 | MS.gene037354:CDS |
| TCACTAACGCTAGCAATGAT+TGG | 0.481602 | 1.3:-77514105 | None:intergenic |
| ACTGGTTCGATGACCGAACT+TGG | 0.485698 | 1.3:+77510414 | MS.gene037354:CDS |
| ATGATATTAATAAGTTCCTA+TGG | 0.488616 | 1.3:+77516664 | MS.gene037354:CDS |
| TTCTCATGCAGGTTTGCTCG+TGG | 0.489608 | 1.3:+77511902 | MS.gene037354:intron |
| AACACTCATATTGCTACTGT+TGG | 0.490916 | 1.3:+77516463 | MS.gene037354:CDS |
| AAGTAAGACAATAGCAATGA+TGG | 0.492039 | 1.3:-77514878 | None:intergenic |
| GCAAGGCACAAATTAAGAAA+AGG | 0.493379 | 1.3:+77514830 | MS.gene037354:CDS |
| TATGGATGGTTCGTATTGGA+GGG | 0.494090 | 1.3:+77516682 | MS.gene037354:CDS |
| GCTGTGACACTAGTTGTGTC+TGG | 0.497013 | 1.3:+77513298 | MS.gene037354:CDS |
| TATTGTCAACAATAACAGTT+CGG | 0.497197 | 1.3:-77516429 | None:intergenic |
| CTCAAAGAAAAGCAAGAAGA+AGG | 0.497387 | 1.3:+77514780 | MS.gene037354:CDS |
| ACAGCATTAAATCCAACAAC+AGG | 0.510921 | 1.3:-77512447 | None:intergenic |
| AGCAGCAGTTCTTCTGGCTA+TGG | 0.515928 | 1.3:+77510970 | MS.gene037354:CDS |
| CCAGACAAGATGCAAGCCGC+TGG | 0.517935 | 1.3:-77514491 | None:intergenic |
| TAAAACTGAGGACACACATA+AGG | 0.518883 | 1.3:+77514750 | MS.gene037354:CDS |
| CCCCTTGGTCGTGTAATCGG+TGG | 0.519474 | 1.3:+77510557 | MS.gene037354:CDS |
| AAAGAGCTTGCATCAGATAG+AGG | 0.520232 | 1.3:-77514309 | None:intergenic |
| CACCGAGAGAGGTATGTTCA+AGG | 0.521704 | 1.3:-77510762 | None:intergenic |
| GTGACTCTGTAGTTGAAGTA+AGG | 0.522802 | 1.3:-77510176 | None:intergenic |
| GGTTGTATTGGGCACACTGT+TGG | 0.523631 | 1.3:+77512413 | MS.gene037354:intron |
| CCCTTGGTCGTGTAATCGGT+GGG | 0.527724 | 1.3:+77510558 | MS.gene037354:CDS |
| CCACAAGGTGCCTGCTGTCA+AGG | 0.529010 | 1.3:-77510600 | None:intergenic |
| ATCGGTGGGACTGTCTATCC+AGG | 0.529949 | 1.3:+77510572 | MS.gene037354:CDS |
| TTCCTTGAACATACCTCTCT+CGG | 0.530525 | 1.3:+77510760 | MS.gene037354:CDS |
| TCTGTTTCAAGGTATCCCCT+TGG | 0.530834 | 1.3:+77510542 | MS.gene037354:intron |
| CCTATAGGTTCACAGTGTAT+GGG | 0.531377 | 1.3:+77515302 | MS.gene037354:intron |
| TTGATATCCATAAAGTAAGA+AGG | 0.535263 | 1.3:-77514147 | None:intergenic |
| TATATATCTCGATCAGTGGC+AGG | 0.535279 | 1.3:+77511303 | MS.gene037354:CDS |
| GGTTATTATTAGGATTGGTG+GGG | 0.536163 | 1.3:+77516631 | MS.gene037354:intron |
| GTATGACTTACCAAGTAATC+GGG | 0.539012 | 1.3:-77516729 | None:intergenic |
| TATTAATAAGTTCCTATGGA+TGG | 0.540170 | 1.3:+77516668 | MS.gene037354:CDS |
| AGTTCAAAGTGGCATAAAAG+AGG | 0.544663 | 1.3:-77511790 | None:intergenic |
| GTTGCTGGGTGCTTTCTATG+TGG | 0.546621 | 1.3:+77514903 | MS.gene037354:CDS |
| TTCCAACTTCAAAAGAGGGA+TGG | 0.547855 | 1.3:+77516865 | MS.gene037354:intron |
| CTCAATAGCATACTTCTACA+TGG | 0.551555 | 1.3:+77511811 | MS.gene037354:CDS |
| ATAAAGTAAGAAGGCCAAGT+TGG | 0.552548 | 1.3:-77514138 | None:intergenic |
| GTAGCTGCAAGCCCAACAAT+GGG | 0.558984 | 1.3:+77513465 | MS.gene037354:CDS |
| AGGTGTTCACAACTCACCAT+TGG | 0.561295 | 1.3:+77517600 | MS.gene037354:intron |
| GGTAGCTGCAAGCCCAACAA+TGG | 0.561623 | 1.3:+77513464 | MS.gene037354:CDS |
| ATGCACAGTAGTACATGCAT+TGG | 0.565217 | 1.3:-77511955 | None:intergenic |
| GATAGCAGTACTTGTTGCAA+TGG | 0.565620 | 1.3:+77513443 | MS.gene037354:CDS |
| GTGATGTTAGAACGATAGAA+GGG | 0.568837 | 1.3:-77515347 | None:intergenic |
| CCAGGTTTGACCTTGACAGC+AGG | 0.568939 | 1.3:+77510590 | MS.gene037354:CDS |
| TTAATTTGTGCCTTGCTAGG+AGG | 0.569070 | 1.3:-77514823 | None:intergenic |
| AGCCCAACAATGGGATGGAG+TGG | 0.569349 | 1.3:+77513474 | MS.gene037354:CDS |
| ACCGAATGCGTGGCGGAGAG+AGG | 0.569536 | 1.3:-77509509 | None:intergenic |
| TTTCGTTCTCATCCATGTGG+TGG | 0.573532 | 1.3:+77513225 | MS.gene037354:CDS |
| CAGTTCTGAAAGTGTTGTGC+CGG | 0.574257 | 1.3:+77514708 | MS.gene037354:CDS |
| GGCAACTTATCTATTAACAA+AGG | 0.580157 | 1.3:+77510835 | MS.gene037354:CDS |
| TCATGTAGACGCTGAATACA+GGG | 0.581789 | 1.3:+77511765 | MS.gene037354:intron |
| GATACTTTATATTGTTACAT+CGG | 0.583646 | 1.3:+77514335 | MS.gene037354:CDS |
| CTAACATCACATTCACATGA+TGG | 0.586009 | 1.3:+77515360 | MS.gene037354:CDS |
| TGTGGAAAAGCCTCCTAGCA+AGG | 0.587595 | 1.3:+77514813 | MS.gene037354:CDS |
| TTATTGTTGACAATAATACC+TGG | 0.589759 | 1.3:+77516437 | MS.gene037354:CDS |
| AAATGCTTACGGAGAAAAGA+CGG | 0.590130 | 1.3:-77509585 | None:intergenic |
| TGTATATCCGCACCATCCAA+TGG | 0.591677 | 1.3:-77517616 | None:intergenic |
| CTTCAACTACAGAGTCACTC+AGG | 0.593654 | 1.3:+77510181 | MS.gene037354:CDS |
| GCAGTTAAGCATTGTTGGTG+TGG | 0.594237 | 1.3:-77516911 | None:intergenic |
| CGGATACCAAACAACTGCAA+TGG | 0.596996 | 1.3:+77516402 | MS.gene037354:CDS |
| GCGGAGAGAGGTTTGAGCAT+CGG | 0.597758 | 1.3:-77509497 | None:intergenic |
| TAATCGGGTTCCTTTATGTG+AGG | 0.598243 | 1.3:-77516714 | None:intergenic |
| CTGCAAGCCCAACAATGGGA+TGG | 0.598334 | 1.3:+77513469 | MS.gene037354:CDS |
| CAAACAGTTTCCACCGAGAG+AGG | 0.600577 | 1.3:-77510773 | None:intergenic |
| GGAGAAAAGACGGATCGAGA+AGG | 0.603010 | 1.3:-77509575 | None:intergenic |
| AATCGGGTTCCTTTATGTGA+GGG | 0.603250 | 1.3:-77516713 | None:intergenic |
| GAACTCACGATAATGCCAGC+TGG | 0.606321 | 1.3:-77514189 | None:intergenic |
| GAGAGAGGTTTGAGCATCGG+TGG | 0.612144 | 1.3:-77509494 | None:intergenic |
| ATAAGTTGCCCATGAAGCAA+AGG | 0.612883 | 1.3:-77510822 | None:intergenic |
| ATGCAGGTTTGCTCGTGGGG+AGG | 0.613474 | 1.3:+77511907 | MS.gene037354:intron |
| GAAGAAGGAAAAGGAACCTG+TGG | 0.613616 | 1.3:+77514795 | MS.gene037354:CDS |
| AAGAACATATTTGACATCCA+AGG | 0.613668 | 1.3:-77516533 | None:intergenic |
| CAACTCACCATTGGATGGTG+CGG | 0.617809 | 1.3:+77517609 | MS.gene037354:CDS |
| CCTTGACAGCAGGCACCTTG+TGG | 0.618596 | 1.3:+77510600 | MS.gene037354:CDS |
| AACTTATTAATATCATCACT+GGG | 0.619603 | 1.3:-77516657 | None:intergenic |
| TGGATGGTTCGTATTGGAGG+GGG | 0.620883 | 1.3:+77516684 | MS.gene037354:CDS |
| TACAGGTTTGTGGAGACAGA+CGG | 0.620893 | 1.3:+77517041 | MS.gene037354:intron |
| GTCATATATATCTCGATCAG+TGG | 0.624270 | 1.3:+77511299 | MS.gene037354:CDS |
| ACTGATCGAGATATATATGA+CGG | 0.627086 | 1.3:-77511297 | None:intergenic |
| CTCCAATACGAACCATCCAT+AGG | 0.628467 | 1.3:-77516680 | None:intergenic |
| CTGATCGAGATATATATGAC+GGG | 0.631540 | 1.3:-77511296 | None:intergenic |
| GTTCAAAGTGGCATAAAAGA+GGG | 0.633018 | 1.3:-77511789 | None:intergenic |
| AATATGAAAGTTTATACATG+AGG | 0.635580 | 1.3:-77516933 | None:intergenic |
| AAGTGTTGTGCCGGATGAGA+CGG | 0.637094 | 1.3:+77514717 | MS.gene037354:CDS |
| TCCCACCGATTACACGACCA+AGG | 0.645079 | 1.3:-77510559 | None:intergenic |
| ATGGATGGTTCGTATTGGAG+GGG | 0.645194 | 1.3:+77516683 | MS.gene037354:CDS |
| TGACAGCAGGCACCTTGTGG+TGG | 0.645256 | 1.3:+77510603 | MS.gene037354:CDS |
| GTGACACTAGTTGTGTCTGG+TGG | 0.649444 | 1.3:+77513301 | MS.gene037354:CDS |
| GTTCACAACTCACCATTGGA+TGG | 0.649815 | 1.3:+77517604 | MS.gene037354:CDS |
| CCCACCGATTACACGACCAA+GGG | 0.652187 | 1.3:-77510558 | None:intergenic |
| TATAAAGTCGAGAAGAATAG+CGG | 0.656209 | 1.3:-77511987 | None:intergenic |
| GATGCTTGTACTTGCTCCAG+CGG | 0.657300 | 1.3:+77514475 | MS.gene037354:CDS |
| CGAGAACGTTACCGAATGCG+TGG | 0.658465 | 1.3:-77509519 | None:intergenic |
| AGTATACAAGAGCCACCACA+TGG | 0.669038 | 1.3:-77513237 | None:intergenic |
| GGAGAATCAACTGATAGACT+GGG | 0.675821 | 1.3:-77514569 | None:intergenic |
| CCTCCAAAGAACAGGATTCG+GGG | 0.676717 | 1.3:+77517647 | MS.gene037354:CDS |
| TGATGTTAGAACGATAGAAG+GGG | 0.680784 | 1.3:-77515346 | None:intergenic |
| AAATACCACCTACCACCACA+AGG | 0.682831 | 1.3:-77510615 | None:intergenic |
| CTTGAACATACCTCTCTCGG+TGG | 0.689126 | 1.3:+77510763 | MS.gene037354:CDS |
| GTATGCTATTGAGTTCAAAG+TGG | 0.693577 | 1.3:-77511801 | None:intergenic |
| CCACCGATTACACGACCAAG+GGG | 0.697270 | 1.3:-77510557 | None:intergenic |
| AAAGTAAGAAGGCCAAGTTG+GGG | 0.698949 | 1.3:-77514136 | None:intergenic |
| AAGTAAGAAGGCCAAGTTGG+GGG | 0.702179 | 1.3:-77514135 | None:intergenic |
| GAACGTTACCGAATGCGTGG+CGG | 0.702556 | 1.3:-77509516 | None:intergenic |
| GCAATGATGGATGTTTCCAG+AGG | 0.714647 | 1.3:-77514865 | None:intergenic |
| GGTGAAGACTGATAAAACTG+AGG | 0.739641 | 1.3:+77514738 | MS.gene037354:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 77509487 | 77517849 | 77509487 | ID=MS.gene037354 |
| chr1.3 | mRNA | 77509487 | 77517849 | 77509487 | ID=MS.gene037354.t1;Parent=MS.gene037354 |
| chr1.3 | exon | 77509487 | 77509597 | 77509487 | ID=MS.gene037354.t1.exon1;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77509487 | 77509597 | 77509487 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77510140 | 77510202 | 77510140 | ID=MS.gene037354.t1.exon2;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77510140 | 77510202 | 77510140 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77510380 | 77510435 | 77510380 | ID=MS.gene037354.t1.exon3;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77510380 | 77510435 | 77510380 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77510553 | 77510624 | 77510553 | ID=MS.gene037354.t1.exon4;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77510553 | 77510624 | 77510553 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77510751 | 77510856 | 77510751 | ID=MS.gene037354.t1.exon5;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77510751 | 77510856 | 77510751 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77510941 | 77510991 | 77510941 | ID=MS.gene037354.t1.exon6;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77510941 | 77510991 | 77510941 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77511294 | 77511389 | 77511294 | ID=MS.gene037354.t1.exon7;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77511294 | 77511389 | 77511294 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77511773 | 77511832 | 77511773 | ID=MS.gene037354.t1.exon8;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77511773 | 77511832 | 77511773 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77511913 | 77512026 | 77511913 | ID=MS.gene037354.t1.exon9;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77511913 | 77512026 | 77511913 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77512414 | 77512500 | 77512414 | ID=MS.gene037354.t1.exon10;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77512414 | 77512500 | 77512414 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77513223 | 77513326 | 77513223 | ID=MS.gene037354.t1.exon11;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77513223 | 77513326 | 77513223 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77513425 | 77513520 | 77513425 | ID=MS.gene037354.t1.exon12;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77513425 | 77513520 | 77513425 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77514083 | 77514203 | 77514083 | ID=MS.gene037354.t1.exon13;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77514083 | 77514203 | 77514083 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77514297 | 77514377 | 77514297 | ID=MS.gene037354.t1.exon14;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77514297 | 77514377 | 77514297 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77514467 | 77514598 | 77514467 | ID=MS.gene037354.t1.exon15;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77514467 | 77514598 | 77514467 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77514697 | 77514924 | 77514697 | ID=MS.gene037354.t1.exon16;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77514697 | 77514924 | 77514697 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77515309 | 77515452 | 77515309 | ID=MS.gene037354.t1.exon17;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77515309 | 77515452 | 77515309 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77516382 | 77516568 | 77516382 | ID=MS.gene037354.t1.exon18;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77516382 | 77516568 | 77516382 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77516643 | 77516740 | 77516643 | ID=MS.gene037354.t1.exon19;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77516643 | 77516740 | 77516643 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77516880 | 77516959 | 77516880 | ID=MS.gene037354.t1.exon20;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77516880 | 77516959 | 77516880 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77517046 | 77517133 | 77517046 | ID=MS.gene037354.t1.exon21;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77517046 | 77517133 | 77517046 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77517602 | 77517691 | 77517602 | ID=MS.gene037354.t1.exon22;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77517602 | 77517691 | 77517602 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| chr1.3 | exon | 77517793 | 77517849 | 77517793 | ID=MS.gene037354.t1.exon23;Parent=MS.gene037354.t1 |
| chr1.3 | CDS | 77517793 | 77517849 | 77517793 | ID=cds.MS.gene037354.t1;Parent=MS.gene037354.t1 |
| Gene Sequence |
| Protein sequence |
