Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037504.t1 | XP_003604703.1 | 96.5 | 433 | 14 | 1 | 1 | 432 | 24 | 456 | 1.40E-228 | 802 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037504.t1 | Q93Z81 | 73.1 | 412 | 105 | 2 | 3 | 408 | 25 | 436 | 3.9e-163 | 575.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037504.t1 | G7JP46 | 96.5 | 433 | 14 | 1 | 1 | 432 | 24 | 456 | 1.0e-228 | 802.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene057847 | MS.gene037504 | PPI |
| MS.gene92638 | MS.gene037504 | PPI |
| MS.gene77339 | MS.gene037504 | PPI |
| MS.gene78431 | MS.gene037504 | PPI |
| MS.gene84200 | MS.gene037504 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037504.t1 | MTR_4g016720 | 96.536 | 433 | 14 | 1 | 1 | 432 | 24 | 456 | 0.0 | 850 |
| MS.gene037504.t1 | MTR_7g068380 | 77.546 | 432 | 92 | 2 | 1 | 428 | 21 | 451 | 0.0 | 600 |
| MS.gene037504.t1 | MTR_5g070330 | 69.727 | 403 | 109 | 5 | 13 | 409 | 29 | 424 | 0.0 | 522 |
| MS.gene037504.t1 | MTR_3g082180 | 48.378 | 370 | 187 | 2 | 39 | 405 | 56 | 424 | 1.40e-114 | 343 |
| MS.gene037504.t1 | MTR_2g105640 | 46.174 | 379 | 186 | 4 | 47 | 415 | 72 | 442 | 1.07e-112 | 338 |
| MS.gene037504.t1 | MTR_8g033030 | 86.567 | 67 | 9 | 0 | 105 | 171 | 30 | 96 | 5.51e-30 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037504.t1 | AT2G38170 | 70.335 | 418 | 120 | 2 | 3 | 416 | 25 | 442 | 0.0 | 578 |
| MS.gene037504.t1 | AT2G38170 | 70.361 | 415 | 119 | 2 | 3 | 413 | 25 | 439 | 0.0 | 577 |
| MS.gene037504.t1 | AT3G51860 | 72.816 | 412 | 106 | 2 | 3 | 408 | 25 | 436 | 0.0 | 573 |
| MS.gene037504.t1 | AT3G51860 | 73.247 | 385 | 97 | 2 | 3 | 381 | 25 | 409 | 0.0 | 529 |
| MS.gene037504.t1 | AT5G01490 | 58.513 | 417 | 165 | 3 | 10 | 418 | 32 | 448 | 1.18e-175 | 499 |
| MS.gene037504.t1 | AT5G01490 | 58.513 | 417 | 165 | 3 | 10 | 418 | 32 | 448 | 1.18e-175 | 499 |
| MS.gene037504.t1 | AT2G38170 | 70.552 | 326 | 92 | 2 | 3 | 324 | 25 | 350 | 1.26e-157 | 451 |
| MS.gene037504.t1 | AT1G55730 | 44.811 | 424 | 221 | 4 | 4 | 416 | 20 | 441 | 5.81e-118 | 352 |
| MS.gene037504.t1 | AT1G55730 | 44.811 | 424 | 221 | 4 | 4 | 416 | 20 | 441 | 5.81e-118 | 352 |
| MS.gene037504.t1 | AT3G13320 | 47.861 | 374 | 191 | 2 | 38 | 408 | 62 | 434 | 9.81e-116 | 346 |
| MS.gene037504.t1 | AT1G55720 | 45.128 | 390 | 212 | 2 | 38 | 426 | 73 | 461 | 8.44e-113 | 339 |
| MS.gene037504.t1 | AT1G55720 | 47.185 | 373 | 193 | 3 | 38 | 408 | 73 | 443 | 2.44e-111 | 335 |
Find 0 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATATTTTTTTTTTTTTT+TGG | - | 33120:11170-11189 | None:intergenic | 0.0% |
| !! | AACTATTTGTAAAAAAAAAA+AGG | - | 33120:11665-11684 | None:intergenic | 10.0% |
| !! | AATAATAATAATAAATGTCA+TGG | - | 33120:11607-11626 | None:intergenic | 10.0% |
| !! | AATCTATTATAATATTTACA+AGG | - | 33120:11130-11149 | None:intergenic | 10.0% |
| !! | TATATAAGTTTAATATGTAT+CGG | - | 33120:13493-13512 | None:intergenic | 10.0% |
| !! | TTATAAGTTATTTATATAAC+AGG | - | 33120:14403-14422 | None:intergenic | 10.0% |
| !!! | GATTATAAAATTTTAACAAA+GGG | - | 33120:12370-12389 | None:intergenic | 10.0% |
| !!! | TGTGTTATAATTTTAAATTT+TGG | + | 33120:10869-10888 | MS.gene037504:intron | 10.0% |
| !!! | TTCTAATTTTTTTTTTCTTT+TGG | + | 33120:11695-11714 | MS.gene037504:intron | 10.0% |
| !! | AGGAAATTTAATTACAATAT+AGG | + | 33120:14043-14062 | MS.gene037504:intron | 15.0% |
| !! | TAACTTATTGACATTATATT+AGG | + | 33120:13907-13926 | MS.gene037504:intron | 15.0% |
| !!! | AATGATATATAAGTCTTTTT+TGG | + | 33120:14485-14504 | MS.gene037504:intron | 15.0% |
| !!! | ACATTTTCTTTAATGAAATT+TGG | - | 33120:11996-12015 | None:intergenic | 15.0% |
| !!! | ATGTTTTATAACTTTTTTCT+TGG | + | 33120:12727-12746 | MS.gene037504:intron | 15.0% |
| !!! | ATTTTTTTAAGGAATAAATC+TGG | + | 33120:11374-11393 | MS.gene037504:intron | 15.0% |
| !!! | GGATTATAAAATTTTAACAA+AGG | - | 33120:12371-12390 | None:intergenic | 15.0% |
| !!! | TTTTATATTTAACTCACTTT+CGG | - | 33120:12442-12461 | None:intergenic | 15.0% |
| !!! | TTTTTCTTTTGGTATAAAAT+TGG | + | 33120:11706-11725 | MS.gene037504:intron | 15.0% |
| !!! | TTTTTGGTAAATTTGTTTAT+AGG | + | 33120:14501-14520 | MS.gene037504:intron | 15.0% |
| !! | ACCTATATAGTTAATTATCA+AGG | + | 33120:11807-11826 | MS.gene037504:intron | 20.0% |
| !! | ATTATATTAGGACATATCTT+TGG | + | 33120:13919-13938 | MS.gene037504:intron | 20.0% |
| !! | GAAAGATTAAATCAAGATAT+AGG | - | 33120:14465-14484 | None:intergenic | 20.0% |
| !! | TTATATTAGGACATATCTTT+GGG | + | 33120:13920-13939 | MS.gene037504:intron | 20.0% |
| !!! | AAGTACACAATTTGTTTTTT+AGG | - | 33120:11303-11322 | None:intergenic | 20.0% |
| !!! | AATGCTAGTTTATGTTAATA+TGG | + | 33120:12104-12123 | MS.gene037504:intron | 20.0% |
| !!! | ACCTTGATAATTAACTATAT+AGG | - | 33120:11811-11830 | None:intergenic | 20.0% |
| !!! | ATAATTTTTTGAATCCTAGT+GGG | + | 33120:12136-12155 | MS.gene037504:intron | 20.0% |
| !!! | ATATTTTTAGCTTCTAGTTA+AGG | - | 33120:11330-11349 | None:intergenic | 20.0% |
| !!! | ATTATCAAGGTTTTAAATCA+CGG | + | 33120:11820-11839 | MS.gene037504:intron | 20.0% |
| !!! | TATAATTTTTTGAATCCTAG+TGG | + | 33120:12135-12154 | MS.gene037504:intron | 20.0% |
| !!! | TCATCCAAAGTTTTAAAAAA+AGG | - | 33120:13346-13365 | None:intergenic | 20.0% |
| !!! | TTTTATAATCCTTGTTACTA+CGG | + | 33120:12380-12399 | MS.gene037504:intron | 20.0% |
| ! | AAGTGTTATAGTAGTCAAAA+TGG | - | 33120:13666-13685 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACACTTTA+TGG | - | 33120:14306-14325 | None:intergenic | 25.0% |
| ! | ACTAAACCTAAAACTTTGTA+AGG | + | 33120:13396-13415 | MS.gene037504:intron | 25.0% |
| ! | ATTTATGAAAGCTTACATCA+AGG | + | 33120:14023-14042 | MS.gene037504:intron | 25.0% |
| ! | CAAACAACTCATATTCAAAT+TGG | + | 33120:14713-14732 | MS.gene037504:intron | 25.0% |
| ! | CAATTTCATTAATTCTTTGC+AGG | + | 33120:13064-13083 | MS.gene037504:intron | 25.0% |
| ! | CATTAAAAACATTGATGTTG+CGG | + | 33120:11969-11988 | MS.gene037504:intron | 25.0% |
| !! | AAACTTGTCTTTAGAAGAAT+TGG | - | 33120:13879-13898 | None:intergenic | 25.0% |
| !! | AATTAGCCAAAACTTTTCTA+AGG | - | 33120:10733-10752 | None:intergenic | 25.0% |
| !! | GTCACATTCACATTTAAAAT+TGG | + | 33120:11028-11047 | MS.gene037504:intron | 25.0% |
| !! | TGGTAAATTTGTTTATAGGA+TGG | + | 33120:14505-14524 | MS.gene037504:intron | 25.0% |
| !!! | AATCTGGAGACATTTTTTTA+AGG | + | 33120:11363-11382 | MS.gene037504:intron | 25.0% |
| !!! | CATCAATGTTTTTAATGTCT+CGG | - | 33120:11966-11985 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTTAGGATACTCA+AGG | - | 33120:11293-11312 | None:intergenic | 25.0% |
| !!! | TTTTGACTACTATAACACTT+TGG | + | 33120:13666-13685 | MS.gene037504:intron | 25.0% |
| AATCAACAAATCAGCAATGT+CGG | - | 33120:14790-14809 | None:intergenic | 30.0% | |
| AATTTCAATCTCCTAGAAAC+AGG | + | 33120:14116-14135 | MS.gene037504:CDS | 30.0% | |
| AATTTCCAAGAGGTTATTCT+TGG | + | 33120:10749-10768 | MS.gene037504:CDS | 30.0% | |
| AGAAAAATGTGAATCTGAAC+AGG | + | 33120:13694-13713 | MS.gene037504:intron | 30.0% | |
| AGAAATTCTCCACAATATCA+AGG | - | 33120:14864-14883 | None:intergenic | 30.0% | |
| AGTGAAATAGTCATAATTCG+CGG | - | 33120:12683-12702 | None:intergenic | 30.0% | |
| ATAAGCAAAGAAATGAGACA+TGG | + | 33120:10626-10645 | MS.gene037504:CDS | 30.0% | |
| ATAATCATGCTACCTATAGT+TGG | + | 33120:13758-13777 | MS.gene037504:CDS | 30.0% | |
| ATTCACTAAATCAACACATG+AGG | + | 33120:14750-14769 | MS.gene037504:intron | 30.0% | |
| ATTTGCTTTCAAGAACAAAC+TGG | + | 33120:13811-13830 | MS.gene037504:CDS | 30.0% | |
| CACTTATTTGTGTCTTTGAT+AGG | - | 33120:13640-13659 | None:intergenic | 30.0% | |
| GGTCTGAGAGAAAAAAAAAA+AGG | - | 33120:15122-15141 | None:intergenic | 30.0% | |
| GTCAAGTTATATTACTGATG+TGG | + | 33120:13247-13266 | MS.gene037504:intron | 30.0% | |
| TAGCACTAACAAAATTGATG+TGG | + | 33120:12219-12238 | MS.gene037504:CDS | 30.0% | |
| TATATAGGTGATGTAGTTTG+TGG | - | 33120:11796-11815 | None:intergenic | 30.0% | |
| TCACAAGTGTTTATGTCAAT+AGG | - | 33120:14255-14274 | None:intergenic | 30.0% | |
| TCCTGGAAAAAAAAAAGTCA+TGG | + | 33120:11852-11871 | MS.gene037504:intron | 30.0% | |
| TGAAAACACTTTATGGACAT+AGG | - | 33120:14299-14318 | None:intergenic | 30.0% | |
| TGTTCTTTGTACAAAAAAGC+AGG | - | 33120:14587-14606 | None:intergenic | 30.0% | |
| TTATGTTAGCAATATCAGCT+TGG | - | 33120:15143-15162 | None:intergenic | 30.0% | |
| TTCACTAAATCAACACATGA+GGG | + | 33120:14751-14770 | MS.gene037504:intron | 30.0% | |
| TTCGTGGTAAGAATTAATAC+AGG | + | 33120:13977-13996 | MS.gene037504:intron | 30.0% | |
| TTGACAAATACTATCAGGTT+TGG | + | 33120:13428-13447 | MS.gene037504:intron | 30.0% | |
| TTGCTCTTGTACATTGTTAT+TGG | + | 33120:14559-14578 | MS.gene037504:CDS | 30.0% | |
| TTGGATTCTTGGTATCAAAA+TGG | + | 33120:14088-14107 | MS.gene037504:CDS | 30.0% | |
| TTTCACAACTACATAGAATC+TGG | - | 33120:14648-14667 | None:intergenic | 30.0% | |
| ! | AAAAACTATCTTAGCTCTTG+AGG | + | 33120:12498-12517 | MS.gene037504:intron | 30.0% |
| ! | AAATTTGCTTATGCTTCTTG+TGG | + | 33120:12779-12798 | MS.gene037504:CDS | 30.0% |
| ! | AAGAAGCAGTAATAGGATTT+TGG | + | 33120:13117-13136 | MS.gene037504:CDS | 30.0% |
| ! | ACTATTTTCATAAGCTATCC+TGG | - | 33120:14341-14360 | None:intergenic | 30.0% |
| ! | AGGTATACTTAGTCTTCATT+TGG | + | 33120:14180-14199 | MS.gene037504:intron | 30.0% |
| ! | ATATAGGTGATGTAGTTTGT+GGG | - | 33120:11795-11814 | None:intergenic | 30.0% |
| ! | TGGATTCCTTAGAAAAGTTT+TGG | + | 33120:10724-10743 | MS.gene037504:CDS | 30.0% |
| ! | TTTCTAGGAGATTGAAATTG+AGG | - | 33120:14115-14134 | None:intergenic | 30.0% |
| !! | AATTTTAACAAAGGGAATGC+AGG | - | 33120:12362-12381 | None:intergenic | 30.0% |
| !! | ATTTTAACAAAGGGAATGCA+GGG | - | 33120:12361-12380 | None:intergenic | 30.0% |
| !! | CATATTTTTGTTCTGCTCTT+AGG | - | 33120:12327-12346 | None:intergenic | 30.0% |
| !!! | ACCATGACTTTTTTTTTTCC+AGG | - | 33120:11856-11875 | None:intergenic | 30.0% |
| !!! | CGCTAAGATTTTTTACATCT+TGG | - | 33120:13299-13318 | None:intergenic | 30.0% |
| !!! | CTAAGTTGATTTTCCAAACA+AGG | + | 33120:14431-14450 | MS.gene037504:intron | 30.0% |
| !!! | CTGGCCTTTTTTTAAAACTT+TGG | + | 33120:13339-13358 | MS.gene037504:intron | 30.0% |
| !!! | GTCATCACGGTTTTAAATTA+AGG | - | 33120:14980-14999 | None:intergenic | 30.0% |
| !!! | TGCTATTTTGTCTGAATATG+TGG | + | 33120:13178-13197 | MS.gene037504:CDS | 30.0% |
| AAATGTGAATGTGACCTTGT+TGG | - | 33120:11023-11042 | None:intergenic | 35.0% | |
| AACTCAAATTGGAATGTTCG+TGG | + | 33120:13961-13980 | MS.gene037504:CDS | 35.0% | |
| AATCGTGATGCAATGTGATT+TGG | + | 33120:11094-11113 | MS.gene037504:intron | 35.0% | |
| AATGAAAGCAGTTGTCATCA+CGG | - | 33120:14993-15012 | None:intergenic | 35.0% | |
| ACCACAAACATTAACACAAC+CGG | - | 33120:14835-14854 | None:intergenic | 35.0% | |
| ACCTAAAACTTTGTAAGGTG+AGG | + | 33120:13401-13420 | MS.gene037504:intron | 35.0% | |
| AGCAATAATGGCAAAAGGAA+TGG | - | 33120:10801-10820 | None:intergenic | 35.0% | |
| ATAATGGCAAAAGGAATGGT+TGG | - | 33120:10797-10816 | None:intergenic | 35.0% | |
| CACGAAGTGAATGTTTGATT+TGG | - | 33120:15032-15051 | None:intergenic | 35.0% | |
| CATTGAGCAATAATGGCAAA+AGG | - | 33120:10806-10825 | None:intergenic | 35.0% | |
| CCAAACGTTGAAACAAACAT+AGG | + | 33120:12561-12580 | MS.gene037504:intron | 35.0% | |
| CCTAAAACTTTGTAAGGTGA+GGG | + | 33120:13402-13421 | MS.gene037504:intron | 35.0% | |
| CCTATGTTTGTTTCAACGTT+TGG | - | 33120:12564-12583 | None:intergenic | 35.0% | |
| CTAAAACTTTGTAAGGTGAG+GGG | + | 33120:13403-13422 | MS.gene037504:intron | 35.0% | |
| CTCACTCATTCTTACAAAGT+CGG | + | 33120:13518-13537 | MS.gene037504:intron | 35.0% | |
| CTTGTTACTACGGAAAATTG+TGG | + | 33120:12390-12409 | MS.gene037504:intron | 35.0% | |
| GGATTAATACACATACCTGT+GGG | - | 33120:11774-11793 | None:intergenic | 35.0% | |
| TATGTGTTACATAGCCAACA+AGG | + | 33120:11006-11025 | MS.gene037504:intron | 35.0% | |
| TCACTAAATCAACACATGAG+GGG | + | 33120:14752-14771 | MS.gene037504:intron | 35.0% | |
| TGCTTTCATTTACAACCACA+TGG | + | 33120:15003-15022 | MS.gene037504:intron | 35.0% | |
| TTAGGTTCTGCAACTCAAAT+TGG | + | 33120:13950-13969 | MS.gene037504:CDS | 35.0% | |
| TTGTTCCAAGAATAACCTCT+TGG | - | 33120:10757-10776 | None:intergenic | 35.0% | |
| ! | ATTTGTTGATTGTGGCAATC+AGG | + | 33120:14799-14818 | MS.gene037504:intron | 35.0% |
| ! | CACAATTTTCCGTAGTAACA+AGG | - | 33120:12392-12411 | None:intergenic | 35.0% |
| ! | CTTTAGAAGAATTGGATGTG+TGG | - | 33120:13871-13890 | None:intergenic | 35.0% |
| ! | GACTTTTGAATGCAACATGT+GGG | + | 33120:12161-12180 | MS.gene037504:CDS | 35.0% |
| ! | GCATTTTACCACGATCTTTT+TGG | - | 33120:11898-11917 | None:intergenic | 35.0% |
| ! | TCCATAGCATTGAGCAATAA+TGG | - | 33120:10813-10832 | None:intergenic | 35.0% |
| !! | ATATCTTTGGGTGTTGCTTT+AGG | + | 33120:13932-13951 | MS.gene037504:CDS | 35.0% |
| !! | CATTGCTGATTTGTTGATTG+TGG | + | 33120:14791-14810 | MS.gene037504:intron | 35.0% |
| !! | CTGCAATATAAAGGTTTTGG+AGG | - | 33120:12644-12663 | None:intergenic | 35.0% |
| !! | GTTGTTTAATTTGCAGAGAC+AGG | + | 33120:12749-12768 | MS.gene037504:intron | 35.0% |
| !! | TAGCAGCAAATCAGTTTTGT+TGG | + | 33120:14682-14701 | MS.gene037504:intron | 35.0% |
| !! | TGTTTGATTTGGATTCCATG+TGG | - | 33120:15021-15040 | None:intergenic | 35.0% |
| !!! | AGTTTTGGCTAATTTCCAAG+AGG | + | 33120:10739-10758 | MS.gene037504:CDS | 35.0% |
| !!! | ATTTTTTGAATCCTAGTGGG+AGG | + | 33120:12139-12158 | MS.gene037504:intron | 35.0% |
| !!! | CGGTTTTAAATTAAGGTCTG+CGG | - | 33120:14973-14992 | None:intergenic | 35.0% |
| AACAGGATGCATCAGATTCA+TGG | + | 33120:13711-13730 | MS.gene037504:intron | 40.0% | |
| AAGGAATCCATAGCGAAGTT+TGG | - | 33120:10714-10733 | None:intergenic | 40.0% | |
| AATGCCACCACATAATAGAG+AGG | - | 33120:12299-12318 | None:intergenic | 40.0% | |
| ACAGGATGCATCAGATTCAT+GGG | + | 33120:13712-13731 | MS.gene037504:intron | 40.0% | |
| AGAAACAGGTTCTCTTGCTT+TGG | + | 33120:14130-14149 | MS.gene037504:CDS | 40.0% | |
| AGACAGATAGCTTACTACAC+AGG | + | 33120:11747-11766 | MS.gene037504:intron | 40.0% | |
| AGGAATGGTTGGAAACAGAA+TGG | - | 33120:10786-10805 | None:intergenic | 40.0% | |
| AGGTTCCAAGAACAAGAAGA+AGG | - | 33120:12279-12298 | None:intergenic | 40.0% | |
| ATACAGGTTCTCTTGCATCA+AGG | + | 33120:13993-14012 | MS.gene037504:intron | 40.0% | |
| ATAGCGAAGTTTGGAGACAA+GGG | - | 33120:10705-10724 | None:intergenic | 40.0% | |
| ATAGGTACTACGACCTTGTT+TGG | - | 33120:14447-14466 | None:intergenic | 40.0% | |
| ATATGTGGTTGACACGATTC+AGG | + | 33120:13193-13212 | MS.gene037504:CDS | 40.0% | |
| ATCAGATTCATGGGGTCTAT+CGG | + | 33120:13721-13740 | MS.gene037504:CDS | 40.0% | |
| CAAGCAACGATCACACATAA+GGG | - | 33120:14071-14090 | None:intergenic | 40.0% | |
| CCAAATCACGATCACAGTTA+TGG | - | 33120:13273-13292 | None:intergenic | 40.0% | |
| CCACAAACATTAACACAACC+GGG | - | 33120:14834-14853 | None:intergenic | 40.0% | |
| CCATAACTGTGATCGTGATT+TGG | + | 33120:13270-13289 | MS.gene037504:intron | 40.0% | |
| CGTTGATACCAAAAAGATCG+TGG | + | 33120:11887-11906 | MS.gene037504:intron | 40.0% | |
| CTTATTTCCATAAGCTCTCC+AGG | + | 33120:14320-14339 | MS.gene037504:intron | 40.0% | |
| CTTGGAACCTCTCTATTATG+TGG | + | 33120:12289-12308 | MS.gene037504:CDS | 40.0% | |
| GCCATTATTGCTCAATGCTA+TGG | + | 33120:10809-10828 | MS.gene037504:CDS | 40.0% | |
| GCTCTATATTTGGCATCAGT+TGG | - | 33120:15180-15199 | None:intergenic | 40.0% | |
| GCTTCAGAAGAAGCAGTAAT+AGG | + | 33120:13110-13129 | MS.gene037504:CDS | 40.0% | |
| GCTTTGGCAATAATAACCAC+AGG | + | 33120:14146-14165 | MS.gene037504:CDS | 40.0% | |
| GGAACTTCTCACTACTTGAA+AGG | + | 33120:14526-14545 | MS.gene037504:CDS | 40.0% | |
| GGATAAATGTAGTGCTCGTT+TGG | + | 33120:12411-12430 | MS.gene037504:intron | 40.0% | |
| GGGATTAATACACATACCTG+TGG | - | 33120:11775-11794 | None:intergenic | 40.0% | |
| GTACCAATGCTGTTCCAATA+TGG | + | 33120:12819-12838 | MS.gene037504:CDS | 40.0% | |
| GTCAGCTTCTTAACAGAGTA+AGG | + | 33120:11580-11599 | MS.gene037504:intron | 40.0% | |
| TAACTGCGGCTGCAATATAA+AGG | - | 33120:12653-12672 | None:intergenic | 40.0% | |
| TAGGTAGCATGATTATGCTG+AGG | - | 33120:13754-13773 | None:intergenic | 40.0% | |
| TATTCCATACATGCAGCCTT+GGG | + | 33120:11513-11532 | MS.gene037504:intron | 40.0% | |
| TCACCATATTGGAACAGCAT+TGG | - | 33120:12825-12844 | None:intergenic | 40.0% | |
| TCCAACCTTCTTCTTGTTCT+TGG | + | 33120:12271-12290 | MS.gene037504:CDS | 40.0% | |
| TCCAAGAACAAGAAGAAGGT+TGG | - | 33120:12275-12294 | None:intergenic | 40.0% | |
| TTATTCCATACATGCAGCCT+TGG | + | 33120:11512-11531 | MS.gene037504:intron | 40.0% | |
| TTCATCTGAACAACTCTGTC+TGG | + | 33120:14210-14229 | MS.gene037504:intron | 40.0% | |
| TTTGTACAAAGAACAGCCTC+CGG | + | 33120:14592-14611 | MS.gene037504:CDS | 40.0% | |
| ! | AAGCAAGAGAACCTGTTTCT+AGG | - | 33120:14130-14149 | None:intergenic | 40.0% |
| ! | ATACTATCAGGTTTGGTACG+TGG | + | 33120:13435-13454 | MS.gene037504:intron | 40.0% |
| ! | CCCTCACCTTACAAAGTTTT+AGG | - | 33120:13405-13424 | None:intergenic | 40.0% |
| ! | CGGCTGCAATATAAAGGTTT+TGG | - | 33120:12647-12666 | None:intergenic | 40.0% |
| ! | GGACTTTTGAATGCAACATG+TGG | + | 33120:12160-12179 | MS.gene037504:CDS | 40.0% |
| ! | GTGATGCAATGTGATTTGGA+GGG | + | 33120:11098-11117 | MS.gene037504:intron | 40.0% |
| ! | GTTTTTGCATGGAGCTTACT+TGG | + | 33120:11535-11554 | MS.gene037504:CDS | 40.0% |
| !! | AAGTCGGCTTGTAAGATTAG+AGG | + | 33120:13534-13553 | MS.gene037504:intron | 40.0% |
| !! | CACTGTCTTGTTTAGTGTTG+AGG | + | 33120:12699-12718 | MS.gene037504:intron | 40.0% |
| !! | GCAGTAATAGGATTTTGGAG+TGG | + | 33120:13122-13141 | MS.gene037504:CDS | 40.0% |
| !! | GGGTGTTGACAAATACTATC+AGG | + | 33120:13423-13442 | MS.gene037504:intron | 40.0% |
| !!! | GATTTTGGAGTGGATTTGCT+TGG | + | 33120:13132-13151 | MS.gene037504:CDS | 40.0% |
| AAAACCCAAGGCTGCATGTA+TGG | - | 33120:11520-11539 | None:intergenic | 45.0% | |
| AACCACAGGCTTCACATTAC+AGG | + | 33120:14160-14179 | MS.gene037504:CDS | 45.0% | |
| AAGAAGAAGGTTGGAGAGGA+TGG | - | 33120:12266-12285 | None:intergenic | 45.0% | |
| AAGAGCTGCTAGCATTGTGA+TGG | + | 33120:12887-12906 | MS.gene037504:CDS | 45.0% | |
| AAGCTATCCTGGAGAGCTTA+TGG | - | 33120:14330-14349 | None:intergenic | 45.0% | |
| AAGCTCCATGCAAAAACCCA+AGG | - | 33120:11532-11551 | None:intergenic | 45.0% | |
| ATCACACGAGATCGCAATCA+AGG | - | 33120:11932-11951 | None:intergenic | 45.0% | |
| CAGCAATGTCGGATCAAGAT+TGG | - | 33120:14779-14798 | None:intergenic | 45.0% | |
| CAGGATGCATCAGATTCATG+GGG | + | 33120:13713-13732 | MS.gene037504:intron | 45.0% | |
| CATACCTTGTCTTCCAACTG+TGG | + | 33120:12925-12944 | MS.gene037504:CDS | 45.0% | |
| CATAGCGAAGTTTGGAGACA+AGG | - | 33120:10706-10725 | None:intergenic | 45.0% | |
| CATTCAAAAGTCCTCCCACT+AGG | - | 33120:12153-12172 | None:intergenic | 45.0% | |
| CCAAGCAACGATCACACATA+AGG | - | 33120:14072-14091 | None:intergenic | 45.0% | |
| CCCGGTTGTGTTAATGTTTG+TGG | + | 33120:14831-14850 | MS.gene037504:intron | 45.0% | |
| CCTTATGTGTGATCGTTGCT+TGG | + | 33120:14069-14088 | MS.gene037504:CDS | 45.0% | |
| CGTTAATGCAGCCTAAATCG+CGG | + | 33120:14893-14912 | MS.gene037504:intron | 45.0% | |
| CTTGTCTCCAAACTTCGCTA+TGG | + | 33120:10704-10723 | MS.gene037504:CDS | 45.0% | |
| GAACAAGAAGAAGGTTGGAG+AGG | - | 33120:12270-12289 | None:intergenic | 45.0% | |
| GAAGTTTGGAGACAAGGGTT+AGG | - | 33120:10700-10719 | None:intergenic | 45.0% | |
| GGAACCTCTCTATTATGTGG+TGG | + | 33120:12292-12311 | MS.gene037504:CDS | 45.0% | |
| GTGATCGTTGCTTGGATTCT+TGG | + | 33120:14077-14096 | MS.gene037504:CDS | 45.0% | |
| GTGGTCAAGTATTCTCTCCT+TGG | + | 33120:12238-12257 | MS.gene037504:CDS | 45.0% | |
| TACCTGTAATGTGAAGCCTG+TGG | - | 33120:14165-14184 | None:intergenic | 45.0% | |
| TCAGCTGCATTGCCAACTAT+AGG | - | 33120:13773-13792 | None:intergenic | 45.0% | |
| TCTTCCAACTGTGGACTCAT+CGG | + | 33120:12934-12953 | MS.gene037504:CDS | 45.0% | |
| TTGCAGTTGAGGTCACAAGT+CGG | + | 33120:12603-12622 | MS.gene037504:intron | 45.0% | |
| ! | CCAATATGGTGACGCTTCAA+TGG | + | 33120:12833-12852 | MS.gene037504:CDS | 45.0% |
| ! | CCATTGAAGCGTCACCATAT+TGG | - | 33120:12836-12855 | None:intergenic | 45.0% |
| ! | CGTGATGCAATGTGATTTGG+AGG | + | 33120:11097-11116 | MS.gene037504:intron | 45.0% |
| ! | GCAATGTGATTTGGAGGGAA+AGG | + | 33120:11103-11122 | MS.gene037504:intron | 45.0% |
| ! | GGTTTGGTACGTGGATAGTT+TGG | + | 33120:13444-13463 | MS.gene037504:intron | 45.0% |
| !! | GGACTTCTAGAATCACGTCT+GGG | - | 33120:12543-12562 | None:intergenic | 45.0% |
| !! | TGGACTTCTAGAATCACGTC+TGG | - | 33120:12544-12563 | None:intergenic | 45.0% |
| !! | TTGAGGTCACAAGTCGGTTT+TGG | + | 33120:12609-12628 | MS.gene037504:intron | 45.0% |
| !!! | TATAATATTTTTAATAAATC+TGG | + | 33120:11347-11366 | MS.gene037504:intron | 5.0% |
| AAGCGACGAGTCTGCATTGA+CGG | - | 33120:12859-12878 | None:intergenic | 50.0% | |
| AATCACGGACGCATCATTCC+TGG | + | 33120:11835-11854 | MS.gene037504:intron | 50.0% | |
| ATTGCCGATGAGTCCACAGT+TGG | - | 33120:12941-12960 | None:intergenic | 50.0% | |
| CTAAATCGCGGCGGCATTAT+AGG | + | 33120:14905-14924 | MS.gene037504:intron | 50.0% | |
| CTATAATGCCGCCGCGATTT+AGG | - | 33120:14907-14926 | None:intergenic | 50.0% | |
| GAGTCCACAGTTGGAAGACA+AGG | - | 33120:12932-12951 | None:intergenic | 50.0% | |
| GCAATCAGGACTTGAACTCC+CGG | + | 33120:14813-14832 | MS.gene037504:intron | 50.0% | |
| GGTCGCGATCCTTGATATTG+TGG | + | 33120:14852-14871 | MS.gene037504:intron | 50.0% | |
| GTAGTCACAATCGTGGTCAC+TGG | + | 33120:13320-13339 | MS.gene037504:intron | 50.0% | |
| TAATGCAGCCTAAATCGCGG+CGG | + | 33120:14896-14915 | MS.gene037504:intron | 50.0% | |
| TATTGCAGCCGCAGTTACAG+TGG | + | 33120:12656-12675 | MS.gene037504:intron | 50.0% | |
| TTAGCGCGTAGTCACAATCG+TGG | + | 33120:13313-13332 | MS.gene037504:intron | 50.0% | |
| TTAGTTCGTGACTGTCGCAG+AGG | - | 33120:13381-13400 | None:intergenic | 50.0% | |
| ! | TGCAGCCTTGGGTTTTTGCA+TGG | + | 33120:11524-11543 | MS.gene037504:intron | 50.0% |
| !! | AAGCTGACTCGTTCAGCAAG+AGG | - | 33120:11568-11587 | None:intergenic | 50.0% |
| !! | AGCTGACTCGTTCAGCAAGA+GGG | - | 33120:11567-11586 | None:intergenic | 50.0% |
| ATGCAGCGCAGTTGCAGTTG+AGG | + | 33120:12592-12611 | MS.gene037504:intron | 55.0% | |
| CAACTGCAACTGCGCTGCAT+TGG | - | 33120:12592-12611 | None:intergenic | 55.0% | |
| GCTTACTACACAGGTCCCAC+AGG | + | 33120:11756-11775 | MS.gene037504:CDS | 55.0% | |
| GGCAATGCAGCTGAACATGC+AGG | + | 33120:13779-13798 | MS.gene037504:CDS | 55.0% | |
| GGTTGGAGAGGATGGAACCA+AGG | - | 33120:12258-12277 | None:intergenic | 55.0% | |
| TTCGCGGTCCACTGTAACTG+CGG | - | 33120:12667-12686 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 33120 | gene | 10623 | 15203 | 10623 | ID=MS.gene037504 |
| 33120 | mRNA | 10623 | 15203 | 10623 | ID=MS.gene037504.t1;Parent=MS.gene037504 |
| 33120 | exon | 10623 | 10841 | 10623 | ID=MS.gene037504.t1.exon1;Parent=MS.gene037504.t1 |
| 33120 | CDS | 10623 | 10841 | 10623 | ID=cds.MS.gene037504.t1;Parent=MS.gene037504.t1 |
| 33120 | exon | 11529 | 11596 | 11529 | ID=MS.gene037504.t1.exon2;Parent=MS.gene037504.t1 |
| 33120 | CDS | 11529 | 11596 | 11529 | ID=cds.MS.gene037504.t1;Parent=MS.gene037504.t1 |
| 33120 | exon | 11749 | 11777 | 11749 | ID=MS.gene037504.t1.exon3;Parent=MS.gene037504.t1 |
| 33120 | CDS | 11749 | 11777 | 11749 | ID=cds.MS.gene037504.t1;Parent=MS.gene037504.t1 |
| 33120 | exon | 12155 | 12351 | 12155 | ID=MS.gene037504.t1.exon4;Parent=MS.gene037504.t1 |
| 33120 | CDS | 12155 | 12351 | 12155 | ID=cds.MS.gene037504.t1;Parent=MS.gene037504.t1 |
| 33120 | exon | 12765 | 12977 | 12765 | ID=MS.gene037504.t1.exon5;Parent=MS.gene037504.t1 |
| 33120 | CDS | 12765 | 12977 | 12765 | ID=cds.MS.gene037504.t1;Parent=MS.gene037504.t1 |
| 33120 | exon | 13086 | 13214 | 13086 | ID=MS.gene037504.t1.exon6;Parent=MS.gene037504.t1 |
| 33120 | CDS | 13086 | 13214 | 13086 | ID=cds.MS.gene037504.t1;Parent=MS.gene037504.t1 |
| 33120 | exon | 13716 | 13832 | 13716 | ID=MS.gene037504.t1.exon7;Parent=MS.gene037504.t1 |
| 33120 | CDS | 13716 | 13832 | 13716 | ID=cds.MS.gene037504.t1;Parent=MS.gene037504.t1 |
| 33120 | exon | 13929 | 13982 | 13929 | ID=MS.gene037504.t1.exon8;Parent=MS.gene037504.t1 |
| 33120 | CDS | 13929 | 13982 | 13929 | ID=cds.MS.gene037504.t1;Parent=MS.gene037504.t1 |
| 33120 | exon | 14065 | 14181 | 14065 | ID=MS.gene037504.t1.exon9;Parent=MS.gene037504.t1 |
| 33120 | CDS | 14065 | 14181 | 14065 | ID=cds.MS.gene037504.t1;Parent=MS.gene037504.t1 |
| 33120 | exon | 14523 | 14613 | 14523 | ID=MS.gene037504.t1.exon10;Parent=MS.gene037504.t1 |
| 33120 | CDS | 14523 | 14613 | 14523 | ID=cds.MS.gene037504.t1;Parent=MS.gene037504.t1 |
| 33120 | exon | 15139 | 15203 | 15139 | ID=MS.gene037504.t1.exon11;Parent=MS.gene037504.t1 |
| 33120 | CDS | 15139 | 15203 | 15139 | ID=cds.MS.gene037504.t1;Parent=MS.gene037504.t1 |
| Gene Sequence |
| Protein sequence |
