Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78431.t1 | XP_003623304.2 | 97.6 | 455 | 11 | 0 | 1 | 455 | 1 | 455 | 2.00E-241 | 844.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78431.t1 | Q93Z81 | 70.9 | 444 | 112 | 6 | 10 | 441 | 6 | 444 | 1.2e-162 | 574.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78431.t1 | G7KSA1 | 97.6 | 455 | 11 | 0 | 1 | 455 | 1 | 455 | 1.4e-241 | 844.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene78431 | 0.841264 | 5.28E-58 | -1.69E-46 |
| MS.gene049153 | MS.gene78431 | 0.846865 | 1.66E-59 | -1.69E-46 |
| MS.gene049356 | MS.gene78431 | 0.853791 | 1.89E-61 | -1.69E-46 |
| MS.gene049369 | MS.gene78431 | 0.812569 | 3.97E-51 | -1.69E-46 |
| MS.gene049757 | MS.gene78431 | 0.8184 | 2.00E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene78431 | 0.812977 | 3.23E-51 | -1.69E-46 |
| MS.gene050128 | MS.gene78431 | 0.844187 | 8.83E-59 | -1.69E-46 |
| MS.gene050301 | MS.gene78431 | 0.804012 | 2.65E-49 | -1.69E-46 |
| MS.gene050464 | MS.gene78431 | 0.811583 | 6.51E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene78431 | 0.8337 | 4.59E-56 | -1.69E-46 |
| MS.gene050971 | MS.gene78431 | 0.801038 | 1.09E-48 | -1.69E-46 |
| MS.gene051521 | MS.gene78431 | 0.818976 | 1.48E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene78431 | 0.811838 | 5.73E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene78431 | 0.869622 | 2.70E-66 | -1.69E-46 |
| MS.gene052253 | MS.gene78431 | 0.821568 | 3.77E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene78431 | 0.841781 | 3.86E-58 | -1.69E-46 |
| MS.gene052485 | MS.gene78431 | 0.81704 | 4.05E-52 | -1.69E-46 |
| MS.gene053169 | MS.gene78431 | 0.815993 | 6.95E-52 | -1.69E-46 |
| MS.gene05316 | MS.gene78431 | 0.891896 | 2.61E-74 | -1.69E-46 |
| MS.gene053449 | MS.gene78431 | 0.81666 | 4.93E-52 | -1.69E-46 |
| MS.gene053494 | MS.gene78431 | 0.810526 | 1.10E-50 | -1.69E-46 |
| MS.gene053813 | MS.gene78431 | 0.804285 | 2.32E-49 | -1.69E-46 |
| MS.gene053889 | MS.gene78431 | 0.803007 | 4.28E-49 | -1.69E-46 |
| MS.gene053912 | MS.gene78431 | 0.824317 | 8.62E-54 | -1.69E-46 |
| MS.gene053928 | MS.gene78431 | 0.802535 | 5.36E-49 | -1.69E-46 |
| MS.gene054010 | MS.gene78431 | 0.821168 | 4.66E-53 | -1.69E-46 |
| MS.gene054011 | MS.gene78431 | 0.810618 | 1.05E-50 | -1.69E-46 |
| MS.gene054012 | MS.gene78431 | 0.809974 | 1.45E-50 | -1.69E-46 |
| MS.gene054013 | MS.gene78431 | 0.805867 | 1.08E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene78431 | 0.845394 | 4.17E-59 | -1.69E-46 |
| MS.gene054349 | MS.gene78431 | 0.834768 | 2.48E-56 | -1.69E-46 |
| MS.gene054556 | MS.gene78431 | 0.833157 | 6.27E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene78431 | 0.826832 | 2.18E-54 | -1.69E-46 |
| MS.gene055369 | MS.gene78431 | 0.815053 | 1.13E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene78431 | 0.812878 | 3.40E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene78431 | 0.805175 | 1.52E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene78431 | 0.81419 | 1.75E-51 | -1.69E-46 |
| MS.gene055909 | MS.gene78431 | 0.81785 | 2.66E-52 | -1.69E-46 |
| MS.gene055911 | MS.gene78431 | 0.826794 | 2.23E-54 | -1.69E-46 |
| MS.gene056233 | MS.gene78431 | 0.823473 | 1.36E-53 | -1.69E-46 |
| MS.gene056422 | MS.gene78431 | 0.80194 | 7.10E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene78431 | 0.803092 | 4.11E-49 | -1.69E-46 |
| MS.gene056514 | MS.gene78431 | 0.800813 | 1.21E-48 | -1.69E-46 |
| MS.gene056659 | MS.gene78431 | 0.80209 | 6.62E-49 | -1.69E-46 |
| MS.gene056723 | MS.gene78431 | 0.808862 | 2.51E-50 | -1.69E-46 |
| MS.gene056899 | MS.gene78431 | -0.819315 | 1.24E-52 | -1.69E-46 |
| MS.gene056902 | MS.gene78431 | 0.808251 | 3.40E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene78431 | 0.808027 | 3.79E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene78431 | 0.855086 | 7.99E-62 | -1.69E-46 |
| MS.gene057448 | MS.gene78431 | 0.855294 | 6.95E-62 | -1.69E-46 |
| MS.gene057449 | MS.gene78431 | 0.858065 | 1.06E-62 | -1.69E-46 |
| MS.gene057450 | MS.gene78431 | 0.848748 | 5.03E-60 | -1.69E-46 |
| MS.gene057537 | MS.gene78431 | 0.886439 | 3.42E-72 | -1.69E-46 |
| MS.gene057749 | MS.gene78431 | 0.825197 | 5.35E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene78431 | 0.828178 | 1.04E-54 | -1.69E-46 |
| MS.gene057825 | MS.gene78431 | 0.821757 | 3.41E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene78431 | 0.805265 | 1.45E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene78431 | 0.806656 | 7.40E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene78431 | -0.80337 | 3.60E-49 | -1.69E-46 |
| MS.gene05858 | MS.gene78431 | 0.803615 | 3.20E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene78431 | 0.849996 | 2.26E-60 | -1.69E-46 |
| MS.gene058949 | MS.gene78431 | 0.843645 | 1.23E-58 | -1.69E-46 |
| MS.gene059011 | MS.gene78431 | 0.801534 | 8.60E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene78431 | 0.817454 | 3.27E-52 | -1.69E-46 |
| MS.gene059285 | MS.gene78431 | 0.816048 | 6.76E-52 | -1.69E-46 |
| MS.gene059294 | MS.gene78431 | 0.830597 | 2.69E-55 | -1.69E-46 |
| MS.gene059366 | MS.gene78431 | 0.841056 | 5.99E-58 | -1.69E-46 |
| MS.gene059402 | MS.gene78431 | -0.800838 | 1.19E-48 | -1.69E-46 |
| MS.gene059420 | MS.gene78431 | 0.862076 | 6.55E-64 | -1.69E-46 |
| MS.gene059462 | MS.gene78431 | 0.811144 | 8.11E-51 | -1.69E-46 |
| MS.gene059674 | MS.gene78431 | 0.807649 | 4.56E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene78431 | 0.808818 | 2.57E-50 | -1.69E-46 |
| MS.gene059807 | MS.gene78431 | 0.875985 | 2.00E-68 | -1.69E-46 |
| MS.gene059876 | MS.gene78431 | 0.813495 | 2.49E-51 | -1.69E-46 |
| MS.gene060247 | MS.gene78431 | 0.819781 | 9.70E-53 | -1.69E-46 |
| MS.gene060372 | MS.gene78431 | 0.808476 | 3.04E-50 | -1.69E-46 |
| MS.gene060495 | MS.gene78431 | 0.835895 | 1.29E-56 | -1.69E-46 |
| MS.gene061049 | MS.gene78431 | 0.812611 | 3.89E-51 | -1.69E-46 |
| MS.gene061051 | MS.gene78431 | -0.806716 | 7.19E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene78431 | 0.803581 | 3.26E-49 | -1.69E-46 |
| MS.gene061159 | MS.gene78431 | 0.838009 | 3.71E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene84200 | MS.gene78431 | PPI |
| MS.gene057847 | MS.gene78431 | PPI |
| MS.gene78431 | MS.gene037504 | PPI |
| MS.gene77339 | MS.gene78431 | PPI |
| MS.gene92638 | MS.gene78431 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78431.t1 | MTR_7g068380 | 97.582 | 455 | 11 | 0 | 1 | 455 | 1 | 455 | 0.0 | 899 |
| MS.gene78431.t1 | MTR_4g016720 | 76.444 | 450 | 102 | 3 | 8 | 455 | 9 | 456 | 0.0 | 630 |
| MS.gene78431.t1 | MTR_5g070330 | 70.823 | 401 | 110 | 4 | 37 | 434 | 29 | 425 | 0.0 | 516 |
| MS.gene78431.t1 | MTR_2g105640 | 48.958 | 384 | 178 | 5 | 62 | 435 | 63 | 438 | 6.11e-118 | 352 |
| MS.gene78431.t1 | MTR_3g082180 | 45.139 | 432 | 208 | 7 | 14 | 434 | 16 | 429 | 1.06e-110 | 333 |
| MS.gene78431.t1 | MTR_8g033030 | 80.247 | 81 | 16 | 0 | 115 | 195 | 16 | 96 | 1.58e-34 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78431.t1 | AT3G51860 | 70.721 | 444 | 113 | 6 | 10 | 441 | 6 | 444 | 0.0 | 576 |
| MS.gene78431.t1 | AT2G38170 | 67.735 | 437 | 136 | 3 | 10 | 441 | 7 | 443 | 0.0 | 574 |
| MS.gene78431.t1 | AT2G38170 | 68.445 | 431 | 131 | 3 | 10 | 435 | 7 | 437 | 0.0 | 572 |
| MS.gene78431.t1 | AT3G51860 | 71.324 | 408 | 101 | 5 | 10 | 405 | 6 | 409 | 0.0 | 522 |
| MS.gene78431.t1 | AT5G01490 | 58.636 | 440 | 173 | 3 | 13 | 445 | 14 | 451 | 6.30e-174 | 495 |
| MS.gene78431.t1 | AT5G01490 | 58.636 | 440 | 173 | 3 | 13 | 445 | 14 | 451 | 6.30e-174 | 495 |
| MS.gene78431.t1 | AT2G38170 | 67.733 | 344 | 106 | 3 | 10 | 348 | 7 | 350 | 1.22e-152 | 439 |
| MS.gene78431.t1 | AT1G55730 | 46.897 | 435 | 223 | 3 | 11 | 438 | 7 | 440 | 8.10e-127 | 375 |
| MS.gene78431.t1 | AT1G55730 | 46.897 | 435 | 223 | 3 | 11 | 438 | 7 | 440 | 8.10e-127 | 375 |
| MS.gene78431.t1 | AT3G13320 | 51.330 | 376 | 179 | 2 | 64 | 436 | 64 | 438 | 1.62e-125 | 372 |
| MS.gene78431.t1 | AT1G55720 | 46.973 | 413 | 209 | 3 | 25 | 436 | 44 | 447 | 8.66e-121 | 360 |
| MS.gene78431.t1 | AT1G55720 | 46.973 | 413 | 209 | 3 | 25 | 436 | 44 | 447 | 1.47e-120 | 360 |
Find 100 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACTTTGCTACTTTGTTAT+TGG | 0.090694 | 7.4:+35343918 | MS.gene78431:CDS |
| TGTTGTCAAGTATTCTCTTT+TGG | 0.190793 | 7.4:+35341905 | MS.gene78431:CDS |
| AAGAGGCTGTGATTGGATTT+TGG | 0.204843 | 7.4:+35342701 | MS.gene78431:CDS |
| GAATTCACTAATGTTGTTAT+TGG | 0.240614 | 7.4:+35342368 | MS.gene78431:CDS |
| AGTCACAGGCTTCACTTTAC+AGG | 0.262749 | 7.4:+35343743 | MS.gene78431:CDS |
| CTTACTTGATCTTTCAACTA+TGG | 0.265436 | 7.4:+35342514 | MS.gene78431:CDS |
| AGTAGCAAAGTAGGAGAATA+AGG | 0.270564 | 7.4:-35343908 | None:intergenic |
| AATACTTGACAACAGCAATT+TGG | 0.296161 | 7.4:-35341896 | None:intergenic |
| ATGTCCATGTCTTGCTTCCT+TGG | 0.298757 | 7.4:-35340611 | None:intergenic |
| AGAAGAACAACCATGGCTTT+TGG | 0.313403 | 7.4:+35340564 | MS.gene78431:CDS |
| GCTTCCTTGGTCAAGACCTT+TGG | 0.324710 | 7.4:-35340598 | None:intergenic |
| TGAGACAGGTTCTCTTGCTT+TGG | 0.332421 | 7.4:+35343713 | MS.gene78431:CDS |
| GTGATGTTATTAACACCATT+TGG | 0.333001 | 7.4:-35344102 | None:intergenic |
| AACATCCAAGAGGTTATTCT+TGG | 0.346417 | 7.4:+35340742 | MS.gene78431:CDS |
| AGGTTCGATGTGCTTCGCTT+AGG | 0.358508 | 7.4:+35340707 | MS.gene78431:CDS |
| TACTCAAATTTCAATGTTTG+CGG | 0.360322 | 7.4:+35343351 | MS.gene78431:CDS |
| TCAAACCTTCTTCTTGTGCT+TGG | 0.370945 | 7.4:+35341939 | MS.gene78431:CDS |
| ATGGATAATGGGTGTGAAAA+TGG | 0.373839 | 7.4:+35343671 | MS.gene78431:CDS |
| TGATGTTATTAACACCATTT+GGG | 0.378729 | 7.4:-35344101 | None:intergenic |
| GGTTCGATGTGCTTCGCTTA+GGG | 0.383144 | 7.4:+35340708 | MS.gene78431:CDS |
| TGTGATTGTTGCATGGATAA+TGG | 0.389675 | 7.4:+35343659 | MS.gene78431:CDS |
| AGTAGCTTTGGTTGGTTGGC+TGG | 0.395588 | 7.4:+35342724 | MS.gene78431:CDS |
| AACAGGATGCATCGGATTCA+TGG | 0.396546 | 7.4:+35343049 | MS.gene78431:intron |
| ATATGTGGTTGATACAATTC+AGG | 0.397274 | 7.4:+35342777 | MS.gene78431:CDS |
| TCAGCTGCATTGCCAACTAT+TGG | 0.400365 | 7.4:-35343108 | None:intergenic |
| GCCTTCTTCACTGGTCCTAC+AGG | 0.414576 | 7.4:+35341696 | MS.gene78431:CDS |
| TTGGAGTAGCTTTGGTTGGT+TGG | 0.422886 | 7.4:+35342720 | MS.gene78431:CDS |
| GCCATTGTTGCTCACTACCT+TGG | 0.429316 | 7.4:+35340802 | MS.gene78431:CDS |
| CATTTCCTTAGGTGTTGCAT+TGG | 0.434861 | 7.4:+35343321 | MS.gene78431:CDS |
| ATTTCCTTAGGTGTTGCATT+GGG | 0.439331 | 7.4:+35343322 | MS.gene78431:CDS |
| TGTTATGCGCGGTCCGGCTC+CGG | 0.444900 | 7.4:-35340636 | None:intergenic |
| TGACTGCAGGACATTTCCTT+AGG | 0.447939 | 7.4:+35343310 | MS.gene78431:intron |
| GCAGAAGAAGAGGCTGTGAT+TGG | 0.449081 | 7.4:+35342694 | MS.gene78431:CDS |
| CTCTCTGTGTGATTGTTGCA+TGG | 0.457803 | 7.4:+35343652 | MS.gene78431:CDS |
| GTTGCTCACTACCTTGGCTT+AGG | 0.459775 | 7.4:+35340808 | MS.gene78431:CDS |
| TGCTTTGTTATCTGAATATG+TGG | 0.461322 | 7.4:+35342762 | MS.gene78431:CDS |
| GTGATTGTTGCATGGATAAT+GGG | 0.463897 | 7.4:+35343660 | MS.gene78431:CDS |
| AGACAAATTGCCTTCTTCAC+TGG | 0.464133 | 7.4:+35341687 | MS.gene78431:intron |
| CTTGGAACCTCTCTACTTTG+TGG | 0.472185 | 7.4:+35341957 | MS.gene78431:CDS |
| ACAATGGCAGCAGGAATGGC+AGG | 0.475255 | 7.4:-35340787 | None:intergenic |
| GACATGGACATGGCCGGAGC+CGG | 0.476259 | 7.4:+35340623 | MS.gene78431:CDS |
| TGCTTCGCTTAGGGTCGTGT+TGG | 0.482780 | 7.4:+35340717 | MS.gene78431:CDS |
| ACAGGATGCATCGGATTCAT+GGG | 0.482785 | 7.4:+35343050 | MS.gene78431:intron |
| AACTTCAACCTCCTTGAGAC+AGG | 0.484883 | 7.4:+35343699 | MS.gene78431:CDS |
| AAGAAGAAGGTTTGAAAGGA+TGG | 0.493952 | 7.4:-35341931 | None:intergenic |
| AGGTTCCAAGCACAAGAAGA+AGG | 0.498266 | 7.4:-35341944 | None:intergenic |
| AGCAACAATGGCAGCAGGAA+TGG | 0.498904 | 7.4:-35340791 | None:intergenic |
| ATCTGCTAGCATTGTGATGT+TGG | 0.501905 | 7.4:+35342479 | MS.gene78431:CDS |
| TGAATAGCAATGGAAGCAAA+TGG | 0.504609 | 7.4:-35342401 | None:intergenic |
| GCTTTGGCAATTATAGTCAC+AGG | 0.509232 | 7.4:+35343729 | MS.gene78431:CDS |
| CAATAACAAAGTAGCAAAGT+AGG | 0.513940 | 7.4:-35343917 | None:intergenic |
| AAGACATGTTATGCGCGGTC+CGG | 0.516110 | 7.4:-35340642 | None:intergenic |
| ATAATCTTGCTACCAATAGT+TGG | 0.517828 | 7.4:+35343096 | MS.gene78431:CDS |
| TGATCATACTCTTGTGTCCA+AGG | 0.518591 | 7.4:+35340687 | MS.gene78431:CDS |
| ACCTGTAGGACCAGTGAAGA+AGG | 0.520142 | 7.4:-35341697 | None:intergenic |
| TGTGGTGGCATTGCTAACCT+TGG | 0.523361 | 7.4:+35341975 | MS.gene78431:CDS |
| GGCAATGCAGCTGAACATGC+AGG | 0.532772 | 7.4:+35343117 | MS.gene78431:CDS |
| TGGTACCAAGAATAACCTCT+TGG | 0.544158 | 7.4:-35340747 | None:intergenic |
| GAACAATGAGGCAGAAGAAG+AGG | 0.545340 | 7.4:+35342684 | MS.gene78431:CDS |
| TAGTGAGCAACAATGGCAGC+AGG | 0.554698 | 7.4:-35340796 | None:intergenic |
| AAGCAAGACATGGACATGGC+CGG | 0.556755 | 7.4:+35340617 | MS.gene78431:CDS |
| TCATTCTTAACAGGATGCAT+CGG | 0.559138 | 7.4:+35343041 | MS.gene78431:intron |
| ATGATCAGATTTCTTGCGCA+AGG | 0.565719 | 7.4:-35340671 | None:intergenic |
| TTTCGCTTTCAAGAACAAGC+TGG | 0.567168 | 7.4:+35343149 | MS.gene78431:CDS |
| GCACAAGAAGAAGGTTTGAA+AGG | 0.568007 | 7.4:-35341935 | None:intergenic |
| GGTACTTCTCACTACTTGAA+AGG | 0.569583 | 7.4:+35343885 | MS.gene78431:CDS |
| GACTTACTCTTCCTAAGCCA+AGG | 0.571467 | 7.4:-35340819 | None:intergenic |
| GGAACCTCTCTACTTTGTGG+TGG | 0.572641 | 7.4:+35341960 | MS.gene78431:CDS |
| AGGAATGGCAGGGAAGAGAA+TGG | 0.574003 | 7.4:-35340776 | None:intergenic |
| AGAACCCAATGCAACACCTA+AGG | 0.575365 | 7.4:-35343326 | None:intergenic |
| GAAGGTTCTACTGTGAGTGC+AGG | 0.577295 | 7.4:-35342441 | None:intergenic |
| AAGCTCACACGTTCAGCAAG+TGG | 0.581166 | 7.4:-35341525 | None:intergenic |
| AAGCAAGAGAACCTGTCTCA+AGG | 0.585227 | 7.4:-35343710 | None:intergenic |
| AAGCGAAGCACATCGAACCT+TGG | 0.585577 | 7.4:-35340704 | None:intergenic |
| GCCAAGGTAGTGAGCAACAA+TGG | 0.587406 | 7.4:-35340803 | None:intergenic |
| AGGGAAGAGAATGGACAGCT+TGG | 0.590813 | 7.4:-35340767 | None:intergenic |
| TTACCATTCTCCAAAAGCCA+TGG | 0.602438 | 7.4:-35340574 | None:intergenic |
| GGACTTCTTAATGCAACATG+TGG | 0.603864 | 7.4:+35341828 | MS.gene78431:CDS |
| GATCTTGACAAGTAGAGTGA+AGG | 0.608527 | 7.4:-35342459 | None:intergenic |
| TTTGGAGAATGGTAATCCAA+AGG | 0.613189 | 7.4:+35340582 | MS.gene78431:CDS |
| TTGACCAAGGAAGCAAGACA+TGG | 0.622225 | 7.4:+35340607 | MS.gene78431:CDS |
| TGGCATTGCTAACCTTGGAG+TGG | 0.622942 | 7.4:+35341980 | MS.gene78431:CDS |
| CAGGATGCATCGGATTCATG+GGG | 0.624218 | 7.4:+35343051 | MS.gene78431:intron |
| AAGCTCAGTATGAAAACCCA+TGG | 0.629810 | 7.4:-35341489 | None:intergenic |
| GCACTGAATGTGAATAGCAA+TGG | 0.630803 | 7.4:-35342411 | None:intergenic |
| GACTTCTTAATGCAACATGT+GGG | 0.630828 | 7.4:+35341829 | MS.gene78431:CDS |
| ATTGTTGAACAGGAAGGTGA+AGG | 0.640185 | 7.4:+35342658 | MS.gene78431:intron |
| CAATGGCAGCAGGAATGGCA+GGG | 0.643983 | 7.4:-35340786 | None:intergenic |
| TTTGTGCAAAGAACACCCAA+TGG | 0.650624 | 7.4:+35343951 | MS.gene78431:CDS |
| TCTTTCAACTATGGACACAC+AGG | 0.659181 | 7.4:+35342523 | MS.gene78431:CDS |
| CGTGTTGGTTAACATCCAAG+AGG | 0.687464 | 7.4:+35340732 | MS.gene78431:CDS |
| AAATTCAAGAAGAACAACCA+TGG | 0.691332 | 7.4:+35340557 | MS.gene78431:CDS |
| TAATCCAAAGGTCTTGACCA+AGG | 0.693880 | 7.4:+35340594 | MS.gene78431:CDS |
| TTGGTAGCAAGATTATGCTG+AGG | 0.695132 | 7.4:-35343089 | None:intergenic |
| AATGCCACCACAAAGTAGAG+AGG | 0.697147 | 7.4:-35341964 | None:intergenic |
| CTGAGAAGACATGTTATGCG+CGG | 0.699994 | 7.4:-35340647 | None:intergenic |
| AGGTGAAGGTGAGAACAATG+AGG | 0.701302 | 7.4:+35342672 | MS.gene78431:CDS |
| CAAGAGAACCTGTCTCAAGG+AGG | 0.707842 | 7.4:-35343707 | None:intergenic |
| AAGGAAGCAAGACATGGACA+TGG | 0.708462 | 7.4:+35340613 | MS.gene78431:CDS |
| CATGCAACAATCACACAGAG+AGG | 0.729956 | 7.4:-35343651 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTATATATTTCAATATAT+AGG | + | chr7.4:35343626-35343645 | MS.gene78431:intron | 10.0% |
| !! | ATGATATATATAAATTAAGA+TGG | - | chr7.4:35340844-35340863 | None:intergenic | 10.0% |
| !! | TCAAAATTAAACATTAATTA+AGG | - | chr7.4:35341743-35341762 | None:intergenic | 10.0% |
| !!! | ACTAATTTTTAATTAAAACA+AGG | + | chr7.4:35341256-35341275 | MS.gene78431:intron | 10.0% |
| !!! | TTTTTTTTAATATTTGATTC+TGG | + | chr7.4:35341622-35341641 | MS.gene78431:intron | 10.0% |
| !! | AAATTCAGAATTTAAAAGAA+TGG | - | chr7.4:35344038-35344057 | None:intergenic | 15.0% |
| !! | ATCTATATCAATTAATTACA+TGG | + | chr7.4:35341371-35341390 | MS.gene78431:intron | 15.0% |
| !! | ATTAACTATAATTGATTATG+TGG | + | chr7.4:35341768-35341787 | MS.gene78431:intron | 15.0% |
| !! | CTAAAAAAATTTCAATCATT+AGG | - | chr7.4:35342278-35342297 | None:intergenic | 15.0% |
| !! | GAAAACATAAAATATTTACT+TGG | + | chr7.4:35343793-35343812 | MS.gene78431:intron | 15.0% |
| !! | TATTATTCTATTCTATGATT+AGG | + | chr7.4:35341322-35341341 | MS.gene78431:intron | 15.0% |
| !! | TTAATTATAAGTTAGATGAA+AGG | - | chr7.4:35343219-35343238 | None:intergenic | 15.0% |
| !!! | AATACTATAGCTTTAAATTA+TGG | + | chr7.4:35343408-35343427 | MS.gene78431:intron | 15.0% |
| !!! | TTTCCTTTTTGTTTTAAATA+AGG | + | chr7.4:35341209-35341228 | MS.gene78431:intron | 15.0% |
| !! | AATTGTACTAAACTGTTTAT+AGG | + | chr7.4:35342801-35342820 | MS.gene78431:intron | 20.0% |
| !! | ACAAAAATTTCATTCTTAAC+AGG | + | chr7.4:35343032-35343051 | MS.gene78431:intron | 20.0% |
| !! | ATTCATAATTCACATTCAAA+AGG | - | chr7.4:35343391-35343410 | None:intergenic | 20.0% |
| !! | TTGACAATTAATGTAAACTT+AGG | - | chr7.4:35344000-35344019 | None:intergenic | 20.0% |
| !! | TTGTATGCAAATATAAACAA+GGG | - | chr7.4:35341586-35341605 | None:intergenic | 20.0% |
| !! | TTTGTATGCAAATATAAACA+AGG | - | chr7.4:35341587-35341606 | None:intergenic | 20.0% |
| !!! | AAGCCTTATTTAAAACAAAA+AGG | - | chr7.4:35341215-35341234 | None:intergenic | 20.0% |
| !!! | ATAATCACCATTTTATTTGT+AGG | + | chr7.4:35343860-35343879 | MS.gene78431:intron | 20.0% |
| !!! | ATACATATTTTACTTACCAT+TGG | - | chr7.4:35343970-35343989 | None:intergenic | 20.0% |
| !!! | TACATATTTTACTTACCATT+GGG | - | chr7.4:35343969-35343988 | None:intergenic | 20.0% |
| !!! | TATTTTTTATTATCCAATCC+TGG | - | chr7.4:35342200-35342219 | None:intergenic | 20.0% |
| ! | AAACTGTTTATAGGCTTATT+TGG | + | chr7.4:35342810-35342829 | MS.gene78431:intron | 25.0% |
| ! | AAGATATGCAACTACAATTT+AGG | - | chr7.4:35342235-35342254 | None:intergenic | 25.0% |
| ! | ATTTCAGTTTCACTTGAATA+AGG | - | chr7.4:35343282-35343301 | None:intergenic | 25.0% |
| ! | CATTCATCAACTTTATAGTT+TGG | - | chr7.4:35343253-35343272 | None:intergenic | 25.0% |
| ! | GAATTCACTAATGTTGTTAT+TGG | + | chr7.4:35342368-35342387 | MS.gene78431:CDS | 25.0% |
| ! | TACTCAAATTTCAATGTTTG+CGG | + | chr7.4:35343351-35343370 | MS.gene78431:CDS | 25.0% |
| ! | TGATGTTATTAACACCATTT+GGG | - | chr7.4:35344104-35344123 | None:intergenic | 25.0% |
| !! | AATACCTCGATTTAAAACTA+TGG | - | chr7.4:35342051-35342070 | None:intergenic | 25.0% |
| !! | CAATTCATCGTTTTCATATA+TGG | - | chr7.4:35342589-35342608 | None:intergenic | 25.0% |
| !! | GAACAATTTTATATACCTGT+AGG | - | chr7.4:35341714-35341733 | None:intergenic | 25.0% |
| !! | TATAATAGTTTGCAGAGTAT+CGG | - | chr7.4:35343453-35343472 | None:intergenic | 25.0% |
| !!! | AAAACTATGGAAGTGTTAAT+TGG | - | chr7.4:35342038-35342057 | None:intergenic | 25.0% |
| !!! | ATAGCTTTAAATTATGGTTG+TGG | + | chr7.4:35343414-35343433 | MS.gene78431:intron | 25.0% |
| !!! | GAAGTGTTAATTGGATTTTA+AGG | - | chr7.4:35342029-35342048 | None:intergenic | 25.0% |
| !!! | GTATTCTCTATTTTTACAGT+TGG | + | chr7.4:35341804-35341823 | MS.gene78431:intron | 25.0% |
| !!! | TGAACTTTGAAACTCTTTTT+TGG | - | chr7.4:35341151-35341170 | None:intergenic | 25.0% |
| AAATTCAAGAAGAACAACCA+TGG | + | chr7.4:35340557-35340576 | MS.gene78431:CDS | 30.0% | |
| AATACTTGACAACAGCAATT+TGG | - | chr7.4:35341899-35341918 | None:intergenic | 30.0% | |
| ATAATCTTGCTACCAATAGT+TGG | + | chr7.4:35343096-35343115 | MS.gene78431:CDS | 30.0% | |
| ATATACATTGTTGAACAGGA+AGG | + | chr7.4:35342652-35342671 | MS.gene78431:intron | 30.0% | |
| CAATAACAAAGTAGCAAAGT+AGG | - | chr7.4:35343920-35343939 | None:intergenic | 30.0% | |
| CATAAGCGCTTATCATATAA+GGG | - | chr7.4:35342970-35342989 | None:intergenic | 30.0% | |
| CATGATATACATTGTTGAAC+AGG | + | chr7.4:35342648-35342667 | MS.gene78431:intron | 30.0% | |
| CTCTGCAAACTATTATATTG+CGG | + | chr7.4:35343456-35343475 | MS.gene78431:intron | 30.0% | |
| CTTACTTGATCTTTCAACTA+TGG | + | chr7.4:35342514-35342533 | MS.gene78431:CDS | 30.0% | |
| GTACCATCCTACAAATAAAA+TGG | - | chr7.4:35343870-35343889 | None:intergenic | 30.0% | |
| GTGATGTTATTAACACCATT+TGG | - | chr7.4:35344105-35344124 | None:intergenic | 30.0% | |
| GTTAGATGAAAGGAAACATA+TGG | - | chr7.4:35343209-35343228 | None:intergenic | 30.0% | |
| TATTATATTGCGGAAAAGTG+TGG | + | chr7.4:35343466-35343485 | MS.gene78431:intron | 30.0% | |
| ! | ATATGTGGTTGATACAATTC+AGG | + | chr7.4:35342777-35342796 | MS.gene78431:CDS | 30.0% |
| ! | CAACAGTTTAAAACTATGGT+TGG | + | chr7.4:35341049-35341068 | MS.gene78431:intron | 30.0% |
| ! | GTGACAACAGTTTAAAACTA+TGG | + | chr7.4:35341045-35341064 | MS.gene78431:intron | 30.0% |
| ! | GTTCTTTAATTTCTCTACAG+TGG | + | chr7.4:35342297-35342316 | MS.gene78431:intron | 30.0% |
| ! | GTTGTCAAGTATTCTCTTTT+GGG | + | chr7.4:35341906-35341925 | MS.gene78431:CDS | 30.0% |
| ! | TGCTTTGTTATCTGAATATG+TGG | + | chr7.4:35342762-35342781 | MS.gene78431:CDS | 30.0% |
| ! | TGTTGTCAAGTATTCTCTTT+TGG | + | chr7.4:35341905-35341924 | MS.gene78431:CDS | 30.0% |
| ! | TTTTCATACTGAGCTTACTT+GGG | + | chr7.4:35341496-35341515 | MS.gene78431:CDS | 30.0% |
| !! | CTACTTTGCTACTTTGTTAT+TGG | + | chr7.4:35343918-35343937 | MS.gene78431:CDS | 30.0% |
| !! | TCACCATTTTATTTGTAGGA+TGG | + | chr7.4:35343864-35343883 | MS.gene78431:intron | 30.0% |
| !!! | ACTTCCATAGTTTTAAATCG+AGG | + | chr7.4:35342044-35342063 | MS.gene78431:intron | 30.0% |
| !!! | CATATCTTTTTCAAATTCCG+CGG | + | chr7.4:35342247-35342266 | MS.gene78431:intron | 30.0% |
| !!! | TTCTCTATTTTTACAGTTGG+AGG | + | chr7.4:35341807-35341826 | MS.gene78431:intron | 30.0% |
| AACATCCAAGAGGTTATTCT+TGG | + | chr7.4:35340742-35340761 | MS.gene78431:CDS | 35.0% | |
| AAGAAGAAGGTTTGAAAGGA+TGG | - | chr7.4:35341934-35341953 | None:intergenic | 35.0% | |
| AGTAGCAAAGTAGGAGAATA+AGG | - | chr7.4:35343911-35343930 | None:intergenic | 35.0% | |
| ATAAAAAGTCCCTTGTATCG+CGG | + | chr7.4:35343531-35343550 | MS.gene78431:intron | 35.0% | |
| GAAATGAATTTCATGACTGC+AGG | + | chr7.4:35343297-35343316 | MS.gene78431:intron | 35.0% | |
| GACTTCTTAATGCAACATGT+GGG | + | chr7.4:35341829-35341848 | MS.gene78431:CDS | 35.0% | |
| GCATAAGCGCTTATCATATA+AGG | - | chr7.4:35342971-35342990 | None:intergenic | 35.0% | |
| GTGATTGTTGCATGGATAAT+GGG | + | chr7.4:35343660-35343679 | MS.gene78431:CDS | 35.0% | |
| TAAATTATGGTTGTGGTCTG+TGG | + | chr7.4:35343421-35343440 | MS.gene78431:intron | 35.0% | |
| TCAATCATTAGGTTAAACCG+CGG | - | chr7.4:35342267-35342286 | None:intergenic | 35.0% | |
| TCATTCTTAACAGGATGCAT+CGG | + | chr7.4:35343041-35343060 | MS.gene78431:intron | 35.0% | |
| TGAATAGCAATGGAAGCAAA+TGG | - | chr7.4:35342404-35342423 | None:intergenic | 35.0% | |
| TGTGATTGTTGCATGGATAA+TGG | + | chr7.4:35343659-35343678 | MS.gene78431:CDS | 35.0% | |
| TTGTTGAGTTCACGTGTAAA+TGG | + | chr7.4:35340953-35340972 | MS.gene78431:intron | 35.0% | |
| TTTGGAGAATGGTAATCCAA+AGG | + | chr7.4:35340582-35340601 | MS.gene78431:CDS | 35.0% | |
| ! | AATCGAGGTATTTAACCAAG+TGG | + | chr7.4:35342059-35342078 | MS.gene78431:intron | 35.0% |
| ! | ATTTCCTTAGGTGTTGCATT+GGG | + | chr7.4:35343322-35343341 | MS.gene78431:CDS | 35.0% |
| ! | GTTTTCATACTGAGCTTACT+TGG | + | chr7.4:35341495-35341514 | MS.gene78431:CDS | 35.0% |
| !! | ATGGATAATGGGTGTGAAAA+TGG | + | chr7.4:35343671-35343690 | MS.gene78431:CDS | 35.0% |
| !! | TTTCAATGTTTTTGCAACCG+CGG | - | chr7.4:35340996-35341015 | None:intergenic | 35.0% |
| !!! | ATTGGATTTTGGAGTAGCTT+TGG | + | chr7.4:35342712-35342731 | MS.gene78431:CDS | 35.0% |
| !!! | ATTTTTTCCACAGACCCAAA+TGG | + | chr7.4:35344087-35344106 | MS.gene78431:intron | 35.0% |
| AAGCTCAGTATGAAAACCCA+TGG | - | chr7.4:35341492-35341511 | None:intergenic | 40.0% | |
| AATCCTGGTTATCCGAAGTT+CGG | - | chr7.4:35342185-35342204 | None:intergenic | 40.0% | |
| AGACAAATTGCCTTCTTCAC+TGG | + | chr7.4:35341687-35341706 | MS.gene78431:intron | 40.0% | |
| ATCTGCTAGCATTGTGATGT+TGG | + | chr7.4:35342479-35342498 | MS.gene78431:CDS | 40.0% | |
| ATGATCAGATTTCTTGCGCA+AGG | - | chr7.4:35340674-35340693 | None:intergenic | 40.0% | |
| ATTAACACCATTTGGGTCTG+TGG | - | chr7.4:35344097-35344116 | None:intergenic | 40.0% | |
| ATTGTTGAACAGGAAGGTGA+AGG | + | chr7.4:35342658-35342677 | MS.gene78431:intron | 40.0% | |
| GATCTTGACAAGTAGAGTGA+AGG | - | chr7.4:35342462-35342481 | None:intergenic | 40.0% | |
| GCACAAGAAGAAGGTTTGAA+AGG | - | chr7.4:35341938-35341957 | None:intergenic | 40.0% | |
| GCACTGAATGTGAATAGCAA+TGG | - | chr7.4:35342414-35342433 | None:intergenic | 40.0% | |
| GCTTTGGCAATTATAGTCAC+AGG | + | chr7.4:35343729-35343748 | MS.gene78431:CDS | 40.0% | |
| GGACTTCTTAATGCAACATG+TGG | + | chr7.4:35341828-35341847 | MS.gene78431:CDS | 40.0% | |
| GGTACTTCTCACTACTTGAA+AGG | + | chr7.4:35343885-35343904 | MS.gene78431:CDS | 40.0% | |
| GTATAAGCTATGAGCGTGTT+TGG | + | chr7.4:35342876-35342895 | MS.gene78431:intron | 40.0% | |
| GTGAGTTCGACAAATCATTC+AGG | + | chr7.4:35342099-35342118 | MS.gene78431:intron | 40.0% | |
| TAATCCAAAGGTCTTGACCA+AGG | + | chr7.4:35340594-35340613 | MS.gene78431:CDS | 40.0% | |
| TATTCCTTGCAAACAGCCAT+GGG | + | chr7.4:35341473-35341492 | MS.gene78431:intron | 40.0% | |
| TCAAACCTTCTTCTTGTGCT+TGG | + | chr7.4:35341939-35341958 | MS.gene78431:CDS | 40.0% | |
| TCGAACTCACTAACCACTTA+AGG | - | chr7.4:35342089-35342108 | None:intergenic | 40.0% | |
| TCTTTCAACTATGGACACAC+AGG | + | chr7.4:35342523-35342542 | MS.gene78431:CDS | 40.0% | |
| TGATCATACTCTTGTGTCCA+AGG | + | chr7.4:35340687-35340706 | MS.gene78431:CDS | 40.0% | |
| TGGTACCAAGAATAACCTCT+TGG | - | chr7.4:35340750-35340769 | None:intergenic | 40.0% | |
| TTACCATTCTCCAAAAGCCA+TGG | - | chr7.4:35340577-35340596 | None:intergenic | 40.0% | |
| TTATTCCTTGCAAACAGCCA+TGG | + | chr7.4:35341472-35341491 | MS.gene78431:intron | 40.0% | |
| TTCCAACCAGGATTCAAACT+CGG | - | chr7.4:35342130-35342149 | None:intergenic | 40.0% | |
| TTTCGCTTTCAAGAACAAGC+TGG | + | chr7.4:35343149-35343168 | MS.gene78431:CDS | 40.0% | |
| TTTGTGCAAAGAACACCCAA+TGG | + | chr7.4:35343951-35343970 | MS.gene78431:CDS | 40.0% | |
| ! | AAGAGGCTGTGATTGGATTT+TGG | + | chr7.4:35342701-35342720 | MS.gene78431:CDS | 40.0% |
| ! | AGAAGAACAACCATGGCTTT+TGG | + | chr7.4:35340564-35340583 | MS.gene78431:CDS | 40.0% |
| ! | CAAGGGTGCAATAAGTTCAT+TGG | - | chr7.4:35341569-35341588 | None:intergenic | 40.0% |
| ! | CATTTCCTTAGGTGTTGCAT+TGG | + | chr7.4:35343321-35343340 | MS.gene78431:CDS | 40.0% |
| ! | GACTTTTTATGTGTCCGCAT+TGG | - | chr7.4:35343521-35343540 | None:intergenic | 40.0% |
| ! | TTGGTAGCAAGATTATGCTG+AGG | - | chr7.4:35343092-35343111 | None:intergenic | 40.0% |
| !! | CATATTTTTGCTCCACTCCA+AGG | - | chr7.4:35341995-35342014 | None:intergenic | 40.0% |
| !!! | AGGCTTATTTGGTGTGCTTT+TGG | + | chr7.4:35342821-35342840 | MS.gene78431:intron | 40.0% |
| !!! | GATTTTGGAGTAGCTTTGGT+TGG | + | chr7.4:35342716-35342735 | MS.gene78431:CDS | 40.0% |
| AAAACCCATGGCTGTTTGCA+AGG | - | chr7.4:35341480-35341499 | None:intergenic | 45.0% | |
| AACAGGATGCATCGGATTCA+TGG | + | chr7.4:35343049-35343068 | MS.gene78431:intron | 45.0% | |
| AACTTCAACCTCCTTGAGAC+AGG | + | chr7.4:35343699-35343718 | MS.gene78431:CDS | 45.0% | |
| AAGCAAGAGAACCTGTCTCA+AGG | - | chr7.4:35343713-35343732 | None:intergenic | 45.0% | |
| AAGGAAGCAAGACATGGACA+TGG | + | chr7.4:35340613-35340632 | MS.gene78431:CDS | 45.0% | |
| AATGCCACCACAAAGTAGAG+AGG | - | chr7.4:35341967-35341986 | None:intergenic | 45.0% | |
| ACAGGATGCATCGGATTCAT+GGG | + | chr7.4:35343050-35343069 | MS.gene78431:intron | 45.0% | |
| ACCAAGTGGTTGACCTTAAG+TGG | + | chr7.4:35342073-35342092 | MS.gene78431:intron | 45.0% | |
| ACCACTTAAGGTCAACCACT+TGG | - | chr7.4:35342077-35342096 | None:intergenic | 45.0% | |
| ACCATTCTTTACCTACCTCC+TGG | + | chr7.4:35342159-35342178 | MS.gene78431:intron | 45.0% | |
| AGAACCCAATGCAACACCTA+AGG | - | chr7.4:35343329-35343348 | None:intergenic | 45.0% | |
| AGGTGAAGGTGAGAACAATG+AGG | + | chr7.4:35342672-35342691 | MS.gene78431:CDS | 45.0% | |
| AGGTTCCAAGCACAAGAAGA+AGG | - | chr7.4:35341947-35341966 | None:intergenic | 45.0% | |
| AGTCACAGGCTTCACTTTAC+AGG | + | chr7.4:35343743-35343762 | MS.gene78431:CDS | 45.0% | |
| ATGGTTGTGGTCTGTGGTTA+CGG | + | chr7.4:35343427-35343446 | MS.gene78431:intron | 45.0% | |
| ATGTCCATGTCTTGCTTCCT+TGG | - | chr7.4:35340614-35340633 | None:intergenic | 45.0% | |
| CAACCAGTCTAAACTGTGTC+CGG | + | chr7.4:35341105-35341124 | MS.gene78431:intron | 45.0% | |
| CATGCAACAATCACACAGAG+AGG | - | chr7.4:35343654-35343673 | None:intergenic | 45.0% | |
| CTCTCTGTGTGATTGTTGCA+TGG | + | chr7.4:35343652-35343671 | MS.gene78431:CDS | 45.0% | |
| CTGAGAAGACATGTTATGCG+CGG | - | chr7.4:35340650-35340669 | None:intergenic | 45.0% | |
| CTTGGAACCTCTCTACTTTG+TGG | + | chr7.4:35341957-35341976 | MS.gene78431:CDS | 45.0% | |
| GAACAATGAGGCAGAAGAAG+AGG | + | chr7.4:35342684-35342703 | MS.gene78431:CDS | 45.0% | |
| GAACTTCGGATAACCAGGAT+TGG | + | chr7.4:35342184-35342203 | MS.gene78431:intron | 45.0% | |
| GACTTACTCTTCCTAAGCCA+AGG | - | chr7.4:35340822-35340841 | None:intergenic | 45.0% | |
| GTGAGCTTTCTCACAGAGTA+AGG | + | chr7.4:35341540-35341559 | MS.gene78431:intron | 45.0% | |
| TCAGCTGCATTGCCAACTAT+TGG | - | chr7.4:35343111-35343130 | None:intergenic | 45.0% | |
| TCCAACCAGGATTCAAACTC+GGG | - | chr7.4:35342129-35342148 | None:intergenic | 45.0% | |
| TGACTGCAGGACATTTCCTT+AGG | + | chr7.4:35343310-35343329 | MS.gene78431:intron | 45.0% | |
| TGAGACAGGTTCTCTTGCTT+TGG | + | chr7.4:35343713-35343732 | MS.gene78431:CDS | 45.0% | |
| TGTTGTCACAACTGCAACTG+CGG | - | chr7.4:35341034-35341053 | None:intergenic | 45.0% | |
| TTGACCAAGGAAGCAAGACA+TGG | + | chr7.4:35340607-35340626 | MS.gene78431:CDS | 45.0% | |
| !! | CAACCATGGCTTTTGGAGAA+TGG | + | chr7.4:35340571-35340590 | MS.gene78431:CDS | 45.0% |
| !! | CGTGTTGGTTAACATCCAAG+AGG | + | chr7.4:35340732-35340751 | MS.gene78431:CDS | 45.0% |
| !! | TTGGAGTAGCTTTGGTTGGT+TGG | + | chr7.4:35342720-35342739 | MS.gene78431:CDS | 45.0% |
| AAGACATGTTATGCGCGGTC+CGG | - | chr7.4:35340645-35340664 | None:intergenic | 50.0% | |
| AAGCAAGACATGGACATGGC+CGG | + | chr7.4:35340617-35340636 | MS.gene78431:CDS | 50.0% | |
| AAGCGAAGCACATCGAACCT+TGG | - | chr7.4:35340707-35340726 | None:intergenic | 50.0% | |
| AAGCTCACACGTTCAGCAAG+TGG | - | chr7.4:35341528-35341547 | None:intergenic | 50.0% | |
| ACCCGAGTTTGAATCCTGGT+TGG | + | chr7.4:35342125-35342144 | MS.gene78431:intron | 50.0% | |
| ACCTGTAGGACCAGTGAAGA+AGG | - | chr7.4:35341700-35341719 | None:intergenic | 50.0% | |
| AGCAACAATGGCAGCAGGAA+TGG | - | chr7.4:35340794-35340813 | None:intergenic | 50.0% | |
| AGGAATGGCAGGGAAGAGAA+TGG | - | chr7.4:35340779-35340798 | None:intergenic | 50.0% | |
| AGGGAAGAGAATGGACAGCT+TGG | - | chr7.4:35340770-35340789 | None:intergenic | 50.0% | |
| AGGTTCGATGTGCTTCGCTT+AGG | + | chr7.4:35340707-35340726 | MS.gene78431:CDS | 50.0% | |
| AGTCTAAACTGTGTCCGGCA+TGG | + | chr7.4:35341110-35341129 | MS.gene78431:intron | 50.0% | |
| ATGCCGGACACAGTTTAGAC+TGG | - | chr7.4:35341111-35341130 | None:intergenic | 50.0% | |
| CAAGAGAACCTGTCTCAAGG+AGG | - | chr7.4:35343710-35343729 | None:intergenic | 50.0% | |
| CAATTGCAGCCGCGATACAA+GGG | - | chr7.4:35343543-35343562 | None:intergenic | 50.0% | |
| CAGGATGCATCGGATTCATG+GGG | + | chr7.4:35343051-35343070 | MS.gene78431:intron | 50.0% | |
| CGGACACAGTTTAGACTGGT+TGG | - | chr7.4:35341107-35341126 | None:intergenic | 50.0% | |
| GAAGGTTCTACTGTGAGTGC+AGG | - | chr7.4:35342444-35342463 | None:intergenic | 50.0% | |
| GAGAACCCGAGTTTGAATCC+TGG | + | chr7.4:35342121-35342140 | MS.gene78431:intron | 50.0% | |
| GCAGAAGAAGAGGCTGTGAT+TGG | + | chr7.4:35342694-35342713 | MS.gene78431:CDS | 50.0% | |
| GCCAAGGTAGTGAGCAACAA+TGG | - | chr7.4:35340806-35340825 | None:intergenic | 50.0% | |
| GCCAGGAGGTAGGTAAAGAA+TGG | - | chr7.4:35342163-35342182 | None:intergenic | 50.0% | |
| GCCATTGTTGCTCACTACCT+TGG | + | chr7.4:35340802-35340821 | MS.gene78431:CDS | 50.0% | |
| GCTTCCTTGGTCAAGACCTT+TGG | - | chr7.4:35340601-35340620 | None:intergenic | 50.0% | |
| GGAACCTCTCTACTTTGTGG+TGG | + | chr7.4:35341960-35341979 | MS.gene78431:CDS | 50.0% | |
| GGCAGATACGGTCGAAATTG+CGG | + | chr7.4:35343487-35343506 | MS.gene78431:intron | 50.0% | |
| GGTTCGATGTGCTTCGCTTA+GGG | + | chr7.4:35340708-35340727 | MS.gene78431:CDS | 50.0% | |
| GTTGCTCACTACCTTGGCTT+AGG | + | chr7.4:35340808-35340827 | MS.gene78431:CDS | 50.0% | |
| TAGTGAGCAACAATGGCAGC+AGG | - | chr7.4:35340799-35340818 | None:intergenic | 50.0% | |
| TCCAGAGTCTATTGCCATGC+CGG | - | chr7.4:35341127-35341146 | None:intergenic | 50.0% | |
| TGGCATTGCTAACCTTGGAG+TGG | + | chr7.4:35341980-35341999 | MS.gene78431:CDS | 50.0% | |
| TGTGGTGGCATTGCTAACCT+TGG | + | chr7.4:35341975-35341994 | MS.gene78431:CDS | 50.0% | |
| TTGATGCACATCTGCAACCG+CGG | + | chr7.4:35340976-35340995 | MS.gene78431:intron | 50.0% | |
| TTGTATCGCGGCTGCAATTG+CGG | + | chr7.4:35343543-35343562 | MS.gene78431:intron | 50.0% | |
| ! | GCGGAAAAGTGTGGCAGATA+CGG | + | chr7.4:35343475-35343494 | MS.gene78431:intron | 50.0% |
| ! | TTGCGGCTCTGATACCAATG+CGG | + | chr7.4:35343504-35343523 | MS.gene78431:intron | 50.0% |
| !! | AGTAGCTTTGGTTGGTTGGC+TGG | + | chr7.4:35342724-35342743 | MS.gene78431:CDS | 50.0% |
| ACAATGGCAGCAGGAATGGC+AGG | - | chr7.4:35340790-35340809 | None:intergenic | 55.0% | |
| CAATGGCAGCAGGAATGGCA+GGG | - | chr7.4:35340789-35340808 | None:intergenic | 55.0% | |
| CTGCAATTGCGGTTGCTGAC+TGG | + | chr7.4:35343554-35343573 | MS.gene78431:intron | 55.0% | |
| GCAATTGCAGCCGCGATACA+AGG | - | chr7.4:35343544-35343563 | None:intergenic | 55.0% | |
| GCCTTCTTCACTGGTCCTAC+AGG | + | chr7.4:35341696-35341715 | MS.gene78431:CDS | 55.0% | |
| GGCAATGCAGCTGAACATGC+AGG | + | chr7.4:35343117-35343136 | MS.gene78431:CDS | 55.0% | |
| GGTCAACGAGTGTTCCAACC+AGG | - | chr7.4:35342142-35342161 | None:intergenic | 55.0% | |
| TCCGGCATGGCAATAGACTC+TGG | + | chr7.4:35341123-35341142 | MS.gene78431:intron | 55.0% | |
| TGCTTCGCTTAGGGTCGTGT+TGG | + | chr7.4:35340717-35340736 | MS.gene78431:CDS | 55.0% | |
| TGGCCGAACTTCGGATAACC+AGG | + | chr7.4:35342179-35342198 | MS.gene78431:intron | 55.0% | |
| TGGTTATCCGAAGTTCGGCC+AGG | - | chr7.4:35342180-35342199 | None:intergenic | 55.0% | |
| TTATCCGAAGTTCGGCCAGG+AGG | - | chr7.4:35342177-35342196 | None:intergenic | 55.0% | |
| CCTACCTCCTGGCCGAACTT+CGG | + | chr7.4:35342170-35342189 | MS.gene78431:intron | 60.0% | |
| CCGAAGTTCGGCCAGGAGGT+AGG | - | chr7.4:35342173-35342192 | None:intergenic | 65.0% | |
| GACATGGACATGGCCGGAGC+CGG | + | chr7.4:35340623-35340642 | MS.gene78431:CDS | 65.0% | |
| TGTTATGCGCGGTCCGGCTC+CGG | - | chr7.4:35340639-35340658 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 35340544 | 35344161 | 35340544 | ID=MS.gene78431 |
| chr7.4 | mRNA | 35340544 | 35344161 | 35340544 | ID=MS.gene78431.t1;Parent=MS.gene78431 |
| chr7.4 | exon | 35340544 | 35340834 | 35340544 | ID=MS.gene78431.t1.exon1;Parent=MS.gene78431.t1 |
| chr7.4 | CDS | 35340544 | 35340834 | 35340544 | ID=cds.MS.gene78431.t1;Parent=MS.gene78431.t1 |
| chr7.4 | exon | 35341489 | 35341556 | 35341489 | ID=MS.gene78431.t1.exon2;Parent=MS.gene78431.t1 |
| chr7.4 | CDS | 35341489 | 35341556 | 35341489 | ID=cds.MS.gene78431.t1;Parent=MS.gene78431.t1 |
| chr7.4 | exon | 35341689 | 35341717 | 35341689 | ID=MS.gene78431.t1.exon3;Parent=MS.gene78431.t1 |
| chr7.4 | CDS | 35341689 | 35341717 | 35341689 | ID=cds.MS.gene78431.t1;Parent=MS.gene78431.t1 |
| chr7.4 | exon | 35341823 | 35342019 | 35341823 | ID=MS.gene78431.t1.exon4;Parent=MS.gene78431.t1 |
| chr7.4 | CDS | 35341823 | 35342019 | 35341823 | ID=cds.MS.gene78431.t1;Parent=MS.gene78431.t1 |
| chr7.4 | exon | 35342354 | 35342566 | 35342354 | ID=MS.gene78431.t1.exon5;Parent=MS.gene78431.t1 |
| chr7.4 | CDS | 35342354 | 35342566 | 35342354 | ID=cds.MS.gene78431.t1;Parent=MS.gene78431.t1 |
| chr7.4 | exon | 35342670 | 35342798 | 35342670 | ID=MS.gene78431.t1.exon6;Parent=MS.gene78431.t1 |
| chr7.4 | CDS | 35342670 | 35342798 | 35342670 | ID=cds.MS.gene78431.t1;Parent=MS.gene78431.t1 |
| chr7.4 | exon | 35343054 | 35343170 | 35343054 | ID=MS.gene78431.t1.exon7;Parent=MS.gene78431.t1 |
| chr7.4 | CDS | 35343054 | 35343170 | 35343054 | ID=cds.MS.gene78431.t1;Parent=MS.gene78431.t1 |
| chr7.4 | exon | 35343319 | 35343372 | 35343319 | ID=MS.gene78431.t1.exon8;Parent=MS.gene78431.t1 |
| chr7.4 | CDS | 35343319 | 35343372 | 35343319 | ID=cds.MS.gene78431.t1;Parent=MS.gene78431.t1 |
| chr7.4 | exon | 35343648 | 35343764 | 35343648 | ID=MS.gene78431.t1.exon9;Parent=MS.gene78431.t1 |
| chr7.4 | CDS | 35343648 | 35343764 | 35343648 | ID=cds.MS.gene78431.t1;Parent=MS.gene78431.t1 |
| chr7.4 | exon | 35343882 | 35343972 | 35343882 | ID=MS.gene78431.t1.exon10;Parent=MS.gene78431.t1 |
| chr7.4 | CDS | 35343882 | 35343972 | 35343882 | ID=cds.MS.gene78431.t1;Parent=MS.gene78431.t1 |
| chr7.4 | exon | 35344100 | 35344161 | 35344100 | ID=MS.gene78431.t1.exon11;Parent=MS.gene78431.t1 |
| chr7.4 | CDS | 35344100 | 35344161 | 35344100 | ID=cds.MS.gene78431.t1;Parent=MS.gene78431.t1 |
| Gene Sequence |
| Protein sequence |
