Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84200.t1 | XP_003623304.2 | 98 | 455 | 9 | 0 | 1 | 455 | 1 | 455 | 3.90E-242 | 847 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84200.t1 | Q93Z81 | 70.9 | 444 | 112 | 6 | 10 | 441 | 6 | 444 | 1.2e-162 | 574.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84200.t1 | G7KSA1 | 98.0 | 455 | 9 | 0 | 1 | 455 | 1 | 455 | 2.8e-242 | 847.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene84200 | 0.856095 | 4.05E-62 | -1.69E-46 |
| MS.gene049151 | MS.gene84200 | 0.820079 | 8.29E-53 | -1.69E-46 |
| MS.gene049153 | MS.gene84200 | 0.860671 | 1.76E-63 | -1.69E-46 |
| MS.gene049356 | MS.gene84200 | 0.880976 | 3.52E-70 | -1.69E-46 |
| MS.gene049369 | MS.gene84200 | 0.844046 | 9.63E-59 | -1.69E-46 |
| MS.gene049480 | MS.gene84200 | 0.80955 | 1.79E-50 | -1.69E-46 |
| MS.gene049757 | MS.gene84200 | 0.808517 | 2.98E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene84200 | 0.81596 | 7.07E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene84200 | 0.814437 | 1.54E-51 | -1.69E-46 |
| MS.gene050128 | MS.gene84200 | 0.877159 | 7.85E-69 | -1.69E-46 |
| MS.gene050301 | MS.gene84200 | 0.83697 | 6.85E-57 | -1.69E-46 |
| MS.gene050464 | MS.gene84200 | 0.810438 | 1.15E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene84200 | 0.835938 | 1.25E-56 | -1.69E-46 |
| MS.gene050900 | MS.gene84200 | 0.813429 | 2.57E-51 | -1.69E-46 |
| MS.gene050971 | MS.gene84200 | 0.827017 | 1.97E-54 | -1.69E-46 |
| MS.gene051521 | MS.gene84200 | 0.811593 | 6.48E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene84200 | 0.82023 | 7.65E-53 | -1.69E-46 |
| MS.gene052077 | MS.gene84200 | 0.804201 | 2.42E-49 | -1.69E-46 |
| MS.gene052178 | MS.gene84200 | 0.822275 | 2.58E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene84200 | 0.895669 | 7.69E-76 | -1.69E-46 |
| MS.gene052253 | MS.gene84200 | 0.832447 | 9.40E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene84200 | 0.805782 | 1.13E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene84200 | 0.871317 | 7.49E-67 | -1.69E-46 |
| MS.gene052485 | MS.gene84200 | 0.833681 | 4.64E-56 | -1.69E-46 |
| MS.gene053073 | MS.gene84200 | 0.810842 | 9.43E-51 | -1.69E-46 |
| MS.gene053169 | MS.gene84200 | 0.803022 | 4.25E-49 | -1.69E-46 |
| MS.gene05316 | MS.gene84200 | 0.911506 | 5.63E-83 | -1.69E-46 |
| MS.gene053449 | MS.gene84200 | 0.836656 | 8.24E-57 | -1.69E-46 |
| MS.gene053494 | MS.gene84200 | 0.805031 | 1.62E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene84200 | 0.834095 | 3.65E-56 | -1.69E-46 |
| MS.gene053559 | MS.gene84200 | 0.828642 | 8.03E-55 | -1.69E-46 |
| MS.gene053758 | MS.gene84200 | 0.82387 | 1.10E-53 | -1.69E-46 |
| MS.gene053813 | MS.gene84200 | 0.822581 | 2.19E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene84200 | 0.80636 | 8.54E-50 | -1.69E-46 |
| MS.gene053912 | MS.gene84200 | 0.845608 | 3.65E-59 | -1.69E-46 |
| MS.gene053928 | MS.gene84200 | 0.825358 | 4.90E-54 | -1.69E-46 |
| MS.gene054010 | MS.gene84200 | 0.816933 | 4.28E-52 | -1.69E-46 |
| MS.gene054011 | MS.gene84200 | 0.810616 | 1.06E-50 | -1.69E-46 |
| MS.gene054012 | MS.gene84200 | 0.808482 | 3.03E-50 | -1.69E-46 |
| MS.gene054013 | MS.gene84200 | 0.80514 | 1.54E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene84200 | 0.830185 | 3.39E-55 | -1.69E-46 |
| MS.gene054183 | MS.gene84200 | 0.820946 | 5.24E-53 | -1.69E-46 |
| MS.gene054349 | MS.gene84200 | 0.831253 | 1.85E-55 | -1.69E-46 |
| MS.gene054556 | MS.gene84200 | 0.823209 | 1.57E-53 | -1.69E-46 |
| MS.gene054955 | MS.gene84200 | 0.807559 | 4.77E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene84200 | 0.835011 | 2.15E-56 | -1.69E-46 |
| MS.gene055422 | MS.gene84200 | 0.803374 | 3.59E-49 | -1.69E-46 |
| MS.gene055533 | MS.gene84200 | 0.82131 | 4.32E-53 | -1.69E-46 |
| MS.gene05553 | MS.gene84200 | 0.811572 | 6.55E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene84200 | 0.822256 | 2.61E-53 | -1.69E-46 |
| MS.gene055666 | MS.gene84200 | 0.821758 | 3.41E-53 | -1.69E-46 |
| MS.gene055909 | MS.gene84200 | 0.813212 | 2.87E-51 | -1.69E-46 |
| MS.gene055911 | MS.gene84200 | 0.818543 | 1.86E-52 | -1.69E-46 |
| MS.gene056233 | MS.gene84200 | 0.830199 | 3.36E-55 | -1.69E-46 |
| MS.gene056407 | MS.gene84200 | 0.804324 | 2.28E-49 | -1.69E-46 |
| MS.gene056422 | MS.gene84200 | 0.814475 | 1.51E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene84200 | 0.821257 | 4.44E-53 | -1.69E-46 |
| MS.gene056609 | MS.gene84200 | 0.818141 | 2.29E-52 | -1.69E-46 |
| MS.gene056659 | MS.gene84200 | 0.83355 | 5.00E-56 | -1.69E-46 |
| MS.gene056723 | MS.gene84200 | 0.806952 | 6.41E-50 | -1.69E-46 |
| MS.gene056899 | MS.gene84200 | -0.804959 | 1.68E-49 | -1.69E-46 |
| MS.gene056902 | MS.gene84200 | 0.805435 | 1.34E-49 | -1.69E-46 |
| MS.gene057124 | MS.gene84200 | 0.82991 | 3.95E-55 | -1.69E-46 |
| MS.gene057396 | MS.gene84200 | 0.87153 | 6.37E-67 | -1.69E-46 |
| MS.gene057448 | MS.gene84200 | 0.883941 | 2.93E-71 | -1.69E-46 |
| MS.gene057449 | MS.gene84200 | 0.886733 | 2.65E-72 | -1.69E-46 |
| MS.gene057450 | MS.gene84200 | 0.880989 | 3.48E-70 | -1.69E-46 |
| MS.gene057537 | MS.gene84200 | 0.905993 | 2.38E-80 | -1.69E-46 |
| MS.gene057749 | MS.gene84200 | 0.814645 | 1.39E-51 | -1.69E-46 |
| MS.gene057823 | MS.gene84200 | 0.819148 | 1.35E-52 | -1.69E-46 |
| MS.gene057825 | MS.gene84200 | 0.802122 | 6.52E-49 | -1.69E-46 |
| MS.gene057927 | MS.gene84200 | 0.809336 | 1.99E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene84200 | 0.827137 | 1.85E-54 | -1.69E-46 |
| MS.gene058007 | MS.gene84200 | 0.81558 | 8.59E-52 | -1.69E-46 |
| MS.gene058075 | MS.gene84200 | 0.803172 | 3.96E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene84200 | 0.821771 | 3.38E-53 | -1.69E-46 |
| MS.gene058120 | MS.gene84200 | 0.800022 | 1.75E-48 | -1.69E-46 |
| MS.gene058142 | MS.gene84200 | 0.814682 | 1.36E-51 | -1.69E-46 |
| MS.gene05842 | MS.gene84200 | 0.823152 | 1.62E-53 | -1.69E-46 |
| MS.gene05858 | MS.gene84200 | 0.807686 | 4.48E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene84200 | 0.872085 | 4.17E-67 | -1.69E-46 |
| MS.gene058948 | MS.gene84200 | 0.80051 | 1.39E-48 | -1.69E-46 |
| MS.gene058949 | MS.gene84200 | 0.847413 | 1.17E-59 | -1.69E-46 |
| MS.gene05907 | MS.gene84200 | 0.832812 | 7.63E-56 | -1.69E-46 |
| MS.gene059285 | MS.gene84200 | 0.837665 | 4.55E-57 | -1.69E-46 |
| MS.gene059294 | MS.gene84200 | 0.83274 | 7.95E-56 | -1.69E-46 |
| MS.gene059366 | MS.gene84200 | 0.865804 | 4.53E-65 | -1.69E-46 |
| MS.gene059420 | MS.gene84200 | 0.852098 | 5.77E-61 | -1.69E-46 |
| MS.gene059462 | MS.gene84200 | 0.807993 | 3.85E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene84200 | 0.813734 | 2.20E-51 | -1.69E-46 |
| MS.gene05959 | MS.gene84200 | 0.811875 | 5.63E-51 | -1.69E-46 |
| MS.gene059674 | MS.gene84200 | 0.826189 | 3.11E-54 | -1.69E-46 |
| MS.gene059676 | MS.gene84200 | 0.817933 | 2.55E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene84200 | 0.838874 | 2.22E-57 | -1.69E-46 |
| MS.gene059692 | MS.gene84200 | 0.828492 | 8.72E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene84200 | 0.825613 | 4.26E-54 | -1.69E-46 |
| MS.gene059711 | MS.gene84200 | 0.818891 | 1.55E-52 | -1.69E-46 |
| MS.gene059788 | MS.gene84200 | 0.80233 | 5.91E-49 | -1.69E-46 |
| MS.gene059807 | MS.gene84200 | 0.889333 | 2.66E-73 | -1.69E-46 |
| MS.gene05984 | MS.gene84200 | 0.823108 | 1.65E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene84200 | 0.818579 | 1.82E-52 | -1.69E-46 |
| MS.gene059974 | MS.gene84200 | 0.804268 | 2.34E-49 | -1.69E-46 |
| MS.gene060247 | MS.gene84200 | 0.832066 | 1.17E-55 | -1.69E-46 |
| MS.gene060495 | MS.gene84200 | 0.855867 | 4.73E-62 | -1.69E-46 |
| MS.gene060496 | MS.gene84200 | 0.809986 | 1.44E-50 | -1.69E-46 |
| MS.gene060818 | MS.gene84200 | 0.801304 | 9.59E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene84200 | 0.818099 | 2.34E-52 | -1.69E-46 |
| MS.gene060986 | MS.gene84200 | 0.804808 | 1.81E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene84200 | 0.832761 | 7.86E-56 | -1.69E-46 |
| MS.gene061051 | MS.gene84200 | -0.846074 | 2.73E-59 | -1.69E-46 |
| MS.gene061154 | MS.gene84200 | 0.815674 | 8.19E-52 | -1.69E-46 |
| MS.gene061159 | MS.gene84200 | 0.849046 | 4.16E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene84200 | MS.gene78431 | PPI |
| MS.gene84200 | MS.gene057847 | PPI |
| MS.gene84200 | MS.gene77339 | PPI |
| MS.gene84200 | MS.gene92638 | PPI |
| MS.gene84200 | MS.gene037504 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84200.t1 | MTR_7g068380 | 98.022 | 455 | 9 | 0 | 1 | 455 | 1 | 455 | 0.0 | 900 |
| MS.gene84200.t1 | MTR_4g016720 | 76.222 | 450 | 103 | 3 | 8 | 455 | 9 | 456 | 0.0 | 629 |
| MS.gene84200.t1 | MTR_5g070330 | 70.823 | 401 | 110 | 4 | 37 | 434 | 29 | 425 | 0.0 | 516 |
| MS.gene84200.t1 | MTR_2g105640 | 48.958 | 384 | 178 | 5 | 62 | 435 | 63 | 438 | 5.37e-118 | 352 |
| MS.gene84200.t1 | MTR_3g082180 | 45.139 | 432 | 208 | 7 | 14 | 434 | 16 | 429 | 8.78e-111 | 334 |
| MS.gene84200.t1 | MTR_8g033030 | 80.247 | 81 | 16 | 0 | 115 | 195 | 16 | 96 | 1.58e-34 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84200.t1 | AT3G51860 | 70.721 | 444 | 113 | 6 | 10 | 441 | 6 | 444 | 0.0 | 576 |
| MS.gene84200.t1 | AT2G38170 | 67.735 | 437 | 136 | 3 | 10 | 441 | 7 | 443 | 0.0 | 575 |
| MS.gene84200.t1 | AT2G38170 | 68.445 | 431 | 131 | 3 | 10 | 435 | 7 | 437 | 0.0 | 572 |
| MS.gene84200.t1 | AT3G51860 | 71.324 | 408 | 101 | 5 | 10 | 405 | 6 | 409 | 0.0 | 522 |
| MS.gene84200.t1 | AT5G01490 | 58.636 | 440 | 173 | 3 | 13 | 445 | 14 | 451 | 6.30e-174 | 495 |
| MS.gene84200.t1 | AT5G01490 | 58.636 | 440 | 173 | 3 | 13 | 445 | 14 | 451 | 6.30e-174 | 495 |
| MS.gene84200.t1 | AT2G38170 | 67.733 | 344 | 106 | 3 | 10 | 348 | 7 | 350 | 1.53e-152 | 439 |
| MS.gene84200.t1 | AT1G55730 | 46.897 | 435 | 223 | 3 | 11 | 438 | 7 | 440 | 8.18e-127 | 375 |
| MS.gene84200.t1 | AT1G55730 | 46.897 | 435 | 223 | 3 | 11 | 438 | 7 | 440 | 8.18e-127 | 375 |
| MS.gene84200.t1 | AT3G13320 | 51.330 | 376 | 179 | 2 | 64 | 436 | 64 | 438 | 1.62e-125 | 372 |
| MS.gene84200.t1 | AT1G55720 | 46.973 | 413 | 209 | 3 | 25 | 436 | 44 | 447 | 8.30e-121 | 360 |
| MS.gene84200.t1 | AT1G55720 | 46.973 | 413 | 209 | 3 | 25 | 436 | 44 | 447 | 1.74e-120 | 360 |
Find 99 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACTTTGCTACTTTGTTAT+TGG | 0.090694 | 7.1:+33517234 | MS.gene84200:CDS |
| TGTTGTCAAGTATTCTCTTT+TGG | 0.190793 | 7.1:+33515160 | MS.gene84200:CDS |
| AAGAGGCTGTGATTGGATTT+TGG | 0.204843 | 7.1:+33516017 | MS.gene84200:CDS |
| GAATTCACTAATGCTGTTAT+TGG | 0.253165 | 7.1:+33515684 | MS.gene84200:CDS |
| AGTCACAGGCTTCACTTTAC+AGG | 0.262749 | 7.1:+33517059 | MS.gene84200:CDS |
| CTTACTTGATCTTTCAACTA+TGG | 0.265436 | 7.1:+33515830 | MS.gene84200:CDS |
| AGTAGCAAAGTAGGAGAATA+AGG | 0.270564 | 7.1:-33517224 | None:intergenic |
| AATACTTGACAACAGCAATT+TGG | 0.296161 | 7.1:-33515151 | None:intergenic |
| ATGTCCATGTCTTGCTTCCT+TGG | 0.298757 | 7.1:-33513929 | None:intergenic |
| AGAAGAACAACCATGGCTTT+TGG | 0.313403 | 7.1:+33513882 | MS.gene84200:CDS |
| GCTTCCTTGGTCAAGACCTT+TGG | 0.324710 | 7.1:-33513916 | None:intergenic |
| TGAGACAGGTTCTCTTGCTT+TGG | 0.332421 | 7.1:+33517029 | MS.gene84200:CDS |
| GTGATGTTATTAACACCATT+TGG | 0.333001 | 7.1:-33517408 | None:intergenic |
| AACATCCAAGAGGTTATTCT+TGG | 0.346417 | 7.1:+33514060 | MS.gene84200:CDS |
| AGGTTCGATGTGCTTCGCTT+AGG | 0.358508 | 7.1:+33514025 | MS.gene84200:CDS |
| TACTCAAATTTCAATGTTTG+CGG | 0.360322 | 7.1:+33516667 | MS.gene84200:CDS |
| ATGGATAATGGGTGTGAAAA+TGG | 0.373839 | 7.1:+33516987 | MS.gene84200:CDS |
| TGATGTTATTAACACCATTT+GGG | 0.378729 | 7.1:-33517407 | None:intergenic |
| GGTTCGATGTGCTTCGCTTA+GGG | 0.383144 | 7.1:+33514026 | MS.gene84200:CDS |
| TGTGATTGTTGCATGGATAA+TGG | 0.389675 | 7.1:+33516975 | MS.gene84200:CDS |
| AGTAGCTTTGGTTGGTTGGC+TGG | 0.395588 | 7.1:+33516040 | MS.gene84200:CDS |
| ATATGTGGTTGATACAATTC+AGG | 0.397274 | 7.1:+33516093 | MS.gene84200:CDS |
| TCAGCTGCATTGCCAACTAT+TGG | 0.400365 | 7.1:-33516424 | None:intergenic |
| TTGGAGTAGCTTTGGTTGGT+TGG | 0.422886 | 7.1:+33516036 | MS.gene84200:CDS |
| AACAGGATGCATCAGATTCA+TGG | 0.429074 | 7.1:+33516365 | MS.gene84200:intron |
| GCCATTGTTGCTCACTACCT+TGG | 0.429316 | 7.1:+33514120 | MS.gene84200:CDS |
| GCCTTCTTCACCGGTCCTAC+AGG | 0.431091 | 7.1:+33514951 | MS.gene84200:CDS |
| CATTTCCTTAGGTGTTGCAT+TGG | 0.434861 | 7.1:+33516637 | MS.gene84200:CDS |
| ATTTCCTTAGGTGTTGCATT+GGG | 0.439331 | 7.1:+33516638 | MS.gene84200:CDS |
| TGTTATGCGCGGTCCGGCTC+CGG | 0.444900 | 7.1:-33513954 | None:intergenic |
| TGACTGCAGGACATTTCCTT+AGG | 0.447939 | 7.1:+33516626 | MS.gene84200:intron |
| GCAGAAGAAGAGGCTGTGAT+TGG | 0.449081 | 7.1:+33516010 | MS.gene84200:CDS |
| CTCTCTGTGTGATTGTTGCA+TGG | 0.457803 | 7.1:+33516968 | MS.gene84200:CDS |
| GTTGCTCACTACCTTGGCTT+AGG | 0.459775 | 7.1:+33514126 | MS.gene84200:CDS |
| TCAAACCTACTTCTTGTGCT+TGG | 0.459885 | 7.1:+33515194 | MS.gene84200:CDS |
| TGCTTTGTTATCTGAATATG+TGG | 0.461322 | 7.1:+33516078 | MS.gene84200:CDS |
| GTGATTGTTGCATGGATAAT+GGG | 0.463897 | 7.1:+33516976 | MS.gene84200:CDS |
| CTTGGAACCTCTCTACTTTG+TGG | 0.472185 | 7.1:+33515212 | MS.gene84200:CDS |
| ACAATGGCAGCAGGAATGGC+AGG | 0.475255 | 7.1:-33514105 | None:intergenic |
| GACATGGACATGGCCGGAGC+CGG | 0.476259 | 7.1:+33513941 | MS.gene84200:CDS |
| AAGAAGTAGGTTTGAAAGGA+TGG | 0.481296 | 7.1:-33515186 | None:intergenic |
| TGCTTCGCTTAGGGTCGTGT+TGG | 0.482780 | 7.1:+33514035 | MS.gene84200:CDS |
| AACTTCAACCTCCTTGAGAC+AGG | 0.484883 | 7.1:+33517015 | MS.gene84200:CDS |
| AGCAACAATGGCAGCAGGAA+TGG | 0.498904 | 7.1:-33514109 | None:intergenic |
| ACCTGTAGGACCGGTGAAGA+AGG | 0.499982 | 7.1:-33514952 | None:intergenic |
| ATCTGCTAGCATTGTGATGT+TGG | 0.501905 | 7.1:+33515795 | MS.gene84200:CDS |
| ACAGGATGCATCAGATTCAT+GGG | 0.502893 | 7.1:+33516366 | MS.gene84200:intron |
| TGAATAGCAATGGAAGCAAA+TGG | 0.504609 | 7.1:-33515717 | None:intergenic |
| GCTTTGGCAATTATAGTCAC+AGG | 0.509232 | 7.1:+33517045 | MS.gene84200:CDS |
| CAATAACAAAGTAGCAAAGT+AGG | 0.513940 | 7.1:-33517233 | None:intergenic |
| AAGACATGTTATGCGCGGTC+CGG | 0.516110 | 7.1:-33513960 | None:intergenic |
| ATAATCTTGCTACCAATAGT+TGG | 0.517828 | 7.1:+33516412 | MS.gene84200:CDS |
| TGATCATACTCTTGTGTCCA+AGG | 0.518591 | 7.1:+33514005 | MS.gene84200:CDS |
| AGGTTCCAAGCACAAGAAGT+AGG | 0.520473 | 7.1:-33515199 | None:intergenic |
| TGTGGTGGCATTGCTAACCT+TGG | 0.523361 | 7.1:+33515230 | MS.gene84200:CDS |
| AGACAAATTGCCTTCTTCAC+CGG | 0.524809 | 7.1:+33514942 | MS.gene84200:intron |
| GCACAAGAAGTAGGTTTGAA+AGG | 0.525763 | 7.1:-33515190 | None:intergenic |
| GGCAATGCAGCTGAACATGC+AGG | 0.532772 | 7.1:+33516433 | MS.gene84200:CDS |
| TGGTACCAAGAATAACCTCT+TGG | 0.544158 | 7.1:-33514065 | None:intergenic |
| GAACAATGAGGCAGAAGAAG+AGG | 0.545340 | 7.1:+33516000 | MS.gene84200:CDS |
| TAGTGAGCAACAATGGCAGC+AGG | 0.554698 | 7.1:-33514114 | None:intergenic |
| AAGCAAGACATGGACATGGC+CGG | 0.556755 | 7.1:+33513935 | MS.gene84200:CDS |
| ATGATCAGATTTCTTGCGCA+AGG | 0.565719 | 7.1:-33513989 | None:intergenic |
| TTTCGCTTTCAAGAACAAGC+TGG | 0.567168 | 7.1:+33516465 | MS.gene84200:CDS |
| GGTACTTCTCACTACTTGAA+AGG | 0.569583 | 7.1:+33517201 | MS.gene84200:CDS |
| AACTTACTCTTCCTAAGCCA+AGG | 0.571467 | 7.1:-33514137 | None:intergenic |
| GGAACCTCTCTACTTTGTGG+TGG | 0.572641 | 7.1:+33515215 | MS.gene84200:CDS |
| AGGAATGGCAGGGAAGAGAA+TGG | 0.574003 | 7.1:-33514094 | None:intergenic |
| AGAACCCAATGCAACACCTA+AGG | 0.575365 | 7.1:-33516642 | None:intergenic |
| GAAGGTTCTACTGTGAGTGC+AGG | 0.577295 | 7.1:-33515757 | None:intergenic |
| AAGCTCACACGTTCAGCAAG+TGG | 0.581166 | 7.1:-33514770 | None:intergenic |
| AAGCAAGAGAACCTGTCTCA+AGG | 0.585227 | 7.1:-33517026 | None:intergenic |
| AAGCGAAGCACATCGAACCT+TGG | 0.585577 | 7.1:-33514022 | None:intergenic |
| GCCAAGGTAGTGAGCAACAA+TGG | 0.587406 | 7.1:-33514121 | None:intergenic |
| AGGGAAGAGAATGGACAGCT+TGG | 0.590813 | 7.1:-33514085 | None:intergenic |
| TTACCATTCTCCAAAAGCCA+TGG | 0.602438 | 7.1:-33513892 | None:intergenic |
| GGACTTCTTAATGCAACATG+TGG | 0.603864 | 7.1:+33515083 | MS.gene84200:CDS |
| GATCTTGACAAGTAGAGTGA+AGG | 0.608527 | 7.1:-33515775 | None:intergenic |
| TTTGGAGAATGGTAATCCAA+AGG | 0.613189 | 7.1:+33513900 | MS.gene84200:CDS |
| TTGACCAAGGAAGCAAGACA+TGG | 0.622225 | 7.1:+33513925 | MS.gene84200:CDS |
| TGGCATTGCTAACCTTGGAG+TGG | 0.622942 | 7.1:+33515235 | MS.gene84200:CDS |
| AAGCTCAGTATGAAAACCCA+TGG | 0.629810 | 7.1:-33514734 | None:intergenic |
| GCACTGAATGTGAATAGCAA+TGG | 0.630803 | 7.1:-33515727 | None:intergenic |
| GACTTCTTAATGCAACATGT+GGG | 0.630828 | 7.1:+33515084 | MS.gene84200:CDS |
| ATTGTTGAACAGGAAGGTGA+AGG | 0.640185 | 7.1:+33515974 | MS.gene84200:intron |
| CAGGATGCATCAGATTCATG+GGG | 0.640272 | 7.1:+33516367 | MS.gene84200:intron |
| CAATGGCAGCAGGAATGGCA+GGG | 0.643983 | 7.1:-33514104 | None:intergenic |
| TTTGTGCAAAGAACACCCAA+TGG | 0.650624 | 7.1:+33517267 | MS.gene84200:CDS |
| TCTTTCAACTATGGACACAC+AGG | 0.659181 | 7.1:+33515839 | MS.gene84200:CDS |
| CGTGTTGGTTAACATCCAAG+AGG | 0.687464 | 7.1:+33514050 | MS.gene84200:CDS |
| AAATTCAAGAAGAACAACCA+TGG | 0.691332 | 7.1:+33513875 | MS.gene84200:CDS |
| TAATCCAAAGGTCTTGACCA+AGG | 0.693880 | 7.1:+33513912 | MS.gene84200:CDS |
| TTGGTAGCAAGATTATGCTG+AGG | 0.695132 | 7.1:-33516405 | None:intergenic |
| AATGCCACCACAAAGTAGAG+AGG | 0.697147 | 7.1:-33515219 | None:intergenic |
| CTGAGAAGACATGTTATGCG+CGG | 0.699994 | 7.1:-33513965 | None:intergenic |
| AGGTGAAGGTGAGAACAATG+AGG | 0.701302 | 7.1:+33515988 | MS.gene84200:CDS |
| CAAGAGAACCTGTCTCAAGG+AGG | 0.707842 | 7.1:-33517023 | None:intergenic |
| AAGGAAGCAAGACATGGACA+TGG | 0.708462 | 7.1:+33513931 | MS.gene84200:CDS |
| CATGCAACAATCACACAGAG+AGG | 0.729956 | 7.1:-33516967 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTATATATTTCAATATAT+AGG | + | chr7.1:33516942-33516961 | MS.gene84200:intron | 10.0% |
| !! | AATGATTCAAATATAAATAA+GGG | - | chr7.1:33514831-33514850 | None:intergenic | 10.0% |
| !! | TAAAAAATATATTGATATTG+CGG | + | chr7.1:33515526-33515545 | MS.gene84200:intron | 10.0% |
| !! | TATTATTCTATTATATGATT+AGG | + | chr7.1:33514625-33514644 | MS.gene84200:intron | 10.0% |
| !! | TCAAAATTAAACATTAATTA+AGG | - | chr7.1:33514997-33515016 | None:intergenic | 10.0% |
| !!! | ACTAATTTTTAATTAAAACA+AGG | + | chr7.1:33514559-33514578 | MS.gene84200:intron | 10.0% |
| !!! | TTATTTTTAATATTTGATTC+TGG | + | chr7.1:33514877-33514896 | MS.gene84200:intron | 10.0% |
| !! | ACAATATCATTAAAATTTAG+TGG | - | chr7.1:33514213-33514232 | None:intergenic | 15.0% |
| !! | CAATATCATTAAAATTTAGT+GGG | - | chr7.1:33514212-33514231 | None:intergenic | 15.0% |
| !! | CAATGATTCAAATATAAATA+AGG | - | chr7.1:33514832-33514851 | None:intergenic | 15.0% |
| !! | GAAAACATAAAATATTTACT+TGG | + | chr7.1:33517109-33517128 | MS.gene84200:intron | 15.0% |
| !! | TTAATTATAAGTTAGATGAA+AGG | - | chr7.1:33516535-33516554 | None:intergenic | 15.0% |
| !!! | AATACTATAGCTTTAAATTA+TGG | + | chr7.1:33516724-33516743 | MS.gene84200:intron | 15.0% |
| !! | AATTGTACTAAACTGTTTAT+AGG | + | chr7.1:33516117-33516136 | MS.gene84200:intron | 20.0% |
| !! | ACAAAAATTTCATTCTTAAC+AGG | + | chr7.1:33516348-33516367 | MS.gene84200:intron | 20.0% |
| !! | ATGGTATATAACTATATGTT+TGG | - | chr7.1:33517335-33517354 | None:intergenic | 20.0% |
| !! | ATTCATAATTCACATTCAAA+AGG | - | chr7.1:33516707-33516726 | None:intergenic | 20.0% |
| !! | CTAAAAAAATTTCACTCATT+AGG | - | chr7.1:33515594-33515613 | None:intergenic | 20.0% |
| !!! | AAGCCTTATTTAAAACAAAA+AGG | - | chr7.1:33514518-33514537 | None:intergenic | 20.0% |
| !!! | AGCCTTATTTAAAACAAAAA+GGG | - | chr7.1:33514517-33514536 | None:intergenic | 20.0% |
| !!! | ATAATCACCATTTTATTTGT+AGG | + | chr7.1:33517176-33517195 | MS.gene84200:intron | 20.0% |
| !!! | ATACATATTTTACTTACCAT+TGG | - | chr7.1:33517286-33517305 | None:intergenic | 20.0% |
| !!! | TACATATTTTACTTACCATT+GGG | - | chr7.1:33517285-33517304 | None:intergenic | 20.0% |
| !!! | TTCCCTTTTTGTTTTAAATA+AGG | + | chr7.1:33514512-33514531 | MS.gene84200:intron | 20.0% |
| ! | AAACTGTTTATAGGCTTATT+TGG | + | chr7.1:33516126-33516145 | MS.gene84200:intron | 25.0% |
| ! | ATTTCAGTTTCACTAGAATA+AGG | - | chr7.1:33516598-33516617 | None:intergenic | 25.0% |
| ! | CATGAATTACAAATTCAGAA+TGG | - | chr7.1:33517354-33517373 | None:intergenic | 25.0% |
| ! | CATTCATCAACTTTATAGTT+TGG | - | chr7.1:33516569-33516588 | None:intergenic | 25.0% |
| ! | TACTCAAATTTCAATGTTTG+CGG | + | chr7.1:33516667-33516686 | MS.gene84200:CDS | 25.0% |
| ! | TATTATATTGTGGAAAAGTG+TGG | + | chr7.1:33516782-33516801 | MS.gene84200:intron | 25.0% |
| ! | TGATGTTATTAACACCATTT+GGG | - | chr7.1:33517410-33517429 | None:intergenic | 25.0% |
| ! | TTGGCAATTAATGTAAACTT+AGG | - | chr7.1:33517316-33517335 | None:intergenic | 25.0% |
| !! | AATACCTCGATTTAAAACTA+TGG | - | chr7.1:33515306-33515325 | None:intergenic | 25.0% |
| !! | CAATTCATCGTTTTCATATA+TGG | - | chr7.1:33515905-33515924 | None:intergenic | 25.0% |
| !! | GTTCTTTAATTTCTCTATAG+TGG | + | chr7.1:33515613-33515632 | MS.gene84200:intron | 25.0% |
| !! | TATAATAGTTTGCAGAGTAT+CGG | - | chr7.1:33516769-33516788 | None:intergenic | 25.0% |
| !! | TGAACAATTTTATTACCTGT+AGG | - | chr7.1:33514969-33514988 | None:intergenic | 25.0% |
| !! | TTTTGAATGAAACCCTTTTT+TGG | - | chr7.1:33514457-33514476 | None:intergenic | 25.0% |
| !!! | AAAACTATGGAAGTGTTAAT+TGG | - | chr7.1:33515293-33515312 | None:intergenic | 25.0% |
| !!! | AATTCTCAATGTTTTTGCAA+CGG | - | chr7.1:33514321-33514340 | None:intergenic | 25.0% |
| !!! | ATAGCTTTAAATTATGGTTG+TGG | + | chr7.1:33516730-33516749 | MS.gene84200:intron | 25.0% |
| !!! | GAAGTGTTAATTGGATTTTA+AGG | - | chr7.1:33515284-33515303 | None:intergenic | 25.0% |
| !!! | TACTTTTTTTAAACAGCCAT+GGG | + | chr7.1:33514718-33514737 | MS.gene84200:intron | 25.0% |
| AAATTCAAGAAGAACAACCA+TGG | + | chr7.1:33513875-33513894 | MS.gene84200:CDS | 30.0% | |
| AATACTTGACAACAGCAATT+TGG | - | chr7.1:33515154-33515173 | None:intergenic | 30.0% | |
| ATAATCTTGCTACCAATAGT+TGG | + | chr7.1:33516412-33516431 | MS.gene84200:CDS | 30.0% | |
| ATAGACTCTTGATCCAAAAA+AGG | + | chr7.1:33514441-33514460 | MS.gene84200:intron | 30.0% | |
| ATATACATTGTTGAACAGGA+AGG | + | chr7.1:33515968-33515987 | MS.gene84200:intron | 30.0% | |
| CAACAATTTACAACTATGGT+TGG | + | chr7.1:33514371-33514390 | MS.gene84200:intron | 30.0% | |
| CAATAACAAAGTAGCAAAGT+AGG | - | chr7.1:33517236-33517255 | None:intergenic | 30.0% | |
| CATGATATACATTGTTGAAC+AGG | + | chr7.1:33515964-33515983 | MS.gene84200:intron | 30.0% | |
| CTCTGCAAACTATTATATTG+TGG | + | chr7.1:33516772-33516791 | MS.gene84200:intron | 30.0% | |
| CTTACTTGATCTTTCAACTA+TGG | + | chr7.1:33515830-33515849 | MS.gene84200:CDS | 30.0% | |
| GAATTCACTAATGCTGTTAT+TGG | + | chr7.1:33515684-33515703 | MS.gene84200:CDS | 30.0% | |
| GTACCATCCTACAAATAAAA+TGG | - | chr7.1:33517186-33517205 | None:intergenic | 30.0% | |
| GTGACAACAATTTACAACTA+TGG | + | chr7.1:33514367-33514386 | MS.gene84200:intron | 30.0% | |
| GTGATGTTATTAACACCATT+TGG | - | chr7.1:33517411-33517430 | None:intergenic | 30.0% | |
| GTTAGATGAAAGGAAACATA+TGG | - | chr7.1:33516525-33516544 | None:intergenic | 30.0% | |
| TAGACTCTTGATCCAAAAAA+GGG | + | chr7.1:33514442-33514461 | MS.gene84200:intron | 30.0% | |
| ! | AATTTTATTACCTGTAGGAC+CGG | - | chr7.1:33514964-33514983 | None:intergenic | 30.0% |
| ! | ATATGTGGTTGATACAATTC+AGG | + | chr7.1:33516093-33516112 | MS.gene84200:CDS | 30.0% |
| ! | GACTTTTTATGTGTCTGTAT+TGG | - | chr7.1:33516837-33516856 | None:intergenic | 30.0% |
| ! | GTTGTCAAGTATTCTCTTTT+GGG | + | chr7.1:33515161-33515180 | MS.gene84200:CDS | 30.0% |
| ! | TGCTTTGTTATCTGAATATG+TGG | + | chr7.1:33516078-33516097 | MS.gene84200:CDS | 30.0% |
| ! | TGTTGTCAAGTATTCTCTTT+TGG | + | chr7.1:33515160-33515179 | MS.gene84200:CDS | 30.0% |
| ! | TTTTCATACTGAGCTTACTT+GGG | + | chr7.1:33514741-33514760 | MS.gene84200:CDS | 30.0% |
| !! | CTACTTTGCTACTTTGTTAT+TGG | + | chr7.1:33517234-33517253 | MS.gene84200:CDS | 30.0% |
| !! | TCACAAAATTTGTTGAGTTC+AGG | + | chr7.1:33514266-33514285 | MS.gene84200:intron | 30.0% |
| !! | TCACCATTTTATTTGTAGGA+TGG | + | chr7.1:33517180-33517199 | MS.gene84200:intron | 30.0% |
| !!! | ACTTCCATAGTTTTAAATCG+AGG | + | chr7.1:33515299-33515318 | MS.gene84200:intron | 30.0% |
| !!! | CTACTTTTTTTAAACAGCCA+TGG | + | chr7.1:33514717-33514736 | MS.gene84200:intron | 30.0% |
| !!! | GCAGATCTTTTTCAAATTTG+CGG | + | chr7.1:33515563-33515582 | MS.gene84200:intron | 30.0% |
| AACATCCAAGAGGTTATTCT+TGG | + | chr7.1:33514060-33514079 | MS.gene84200:CDS | 35.0% | |
| AAGAAGTAGGTTTGAAAGGA+TGG | - | chr7.1:33515189-33515208 | None:intergenic | 35.0% | |
| AAGATCTGCAACTGCAATTT+AGG | - | chr7.1:33515552-33515571 | None:intergenic | 35.0% | |
| AGTAGCAAAGTAGGAGAATA+AGG | - | chr7.1:33517227-33517246 | None:intergenic | 35.0% | |
| ATAAAAAGTCCCTTGTATCG+CGG | + | chr7.1:33516847-33516866 | MS.gene84200:intron | 35.0% | |
| CATAAGCGCTTGTCATATAA+GGG | - | chr7.1:33516286-33516305 | None:intergenic | 35.0% | |
| GAAATGAATTTCATGACTGC+AGG | + | chr7.1:33516613-33516632 | MS.gene84200:intron | 35.0% | |
| GACTTCTTAATGCAACATGT+GGG | + | chr7.1:33515084-33515103 | MS.gene84200:CDS | 35.0% | |
| GTACTCTCTCTTATTACAGT+GGG | + | chr7.1:33515059-33515078 | MS.gene84200:intron | 35.0% | |
| GTGATTGTTGCATGGATAAT+GGG | + | chr7.1:33516976-33516995 | MS.gene84200:CDS | 35.0% | |
| TGAATAGCAATGGAAGCAAA+TGG | - | chr7.1:33515720-33515739 | None:intergenic | 35.0% | |
| TGATTGATGCAGTCTCAATT+TGG | + | chr7.1:33515481-33515500 | MS.gene84200:intron | 35.0% | |
| TGTACTCTCTCTTATTACAG+TGG | + | chr7.1:33515058-33515077 | MS.gene84200:intron | 35.0% | |
| TGTGATTGTTGCATGGATAA+TGG | + | chr7.1:33516975-33516994 | MS.gene84200:CDS | 35.0% | |
| TTTGGAGAATGGTAATCCAA+AGG | + | chr7.1:33513900-33513919 | MS.gene84200:CDS | 35.0% | |
| ! | AATCGAGGTATTTAACCAAG+TGG | + | chr7.1:33515314-33515333 | MS.gene84200:intron | 35.0% |
| ! | ATTTCCTTAGGTGTTGCATT+GGG | + | chr7.1:33516638-33516657 | MS.gene84200:CDS | 35.0% |
| ! | GTTTTCATACTGAGCTTACT+TGG | + | chr7.1:33514740-33514759 | MS.gene84200:CDS | 35.0% |
| ! | TAAGGGTGCAATAAGTTCAT+TGG | - | chr7.1:33514814-33514833 | None:intergenic | 35.0% |
| !! | ATGGATAATGGGTGTGAAAA+TGG | + | chr7.1:33516987-33517006 | MS.gene84200:CDS | 35.0% |
| !!! | ATTGGATTTTGGAGTAGCTT+TGG | + | chr7.1:33516028-33516047 | MS.gene84200:CDS | 35.0% |
| !!! | GTCTCAATTTGGTTTTACTG+TGG | + | chr7.1:33515492-33515511 | MS.gene84200:intron | 35.0% |
| AACAGGATGCATCAGATTCA+TGG | + | chr7.1:33516365-33516384 | MS.gene84200:intron | 40.0% | |
| AACTTACTCTTCCTAAGCCA+AGG | - | chr7.1:33514140-33514159 | None:intergenic | 40.0% | |
| AAGCTCAGTATGAAAACCCA+TGG | - | chr7.1:33514737-33514756 | None:intergenic | 40.0% | |
| AATCCTGGTAATCCGAAGTT+CGG | - | chr7.1:33515440-33515459 | None:intergenic | 40.0% | |
| ACAGGATGCATCAGATTCAT+GGG | + | chr7.1:33516366-33516385 | MS.gene84200:intron | 40.0% | |
| AGACAAATTGCCTTCTTCAC+CGG | + | chr7.1:33514942-33514961 | MS.gene84200:intron | 40.0% | |
| ATCAATCACCCTTTGATCCA+GGG | - | chr7.1:33515469-33515488 | None:intergenic | 40.0% | |
| ATCTGCTAGCATTGTGATGT+TGG | + | chr7.1:33515795-33515814 | MS.gene84200:CDS | 40.0% | |
| ATGATCAGATTTCTTGCGCA+AGG | - | chr7.1:33513992-33514011 | None:intergenic | 40.0% | |
| ATTAACACCATTTGGGTCTG+TGG | - | chr7.1:33517403-33517422 | None:intergenic | 40.0% | |
| ATTGTTGAACAGGAAGGTGA+AGG | + | chr7.1:33515974-33515993 | MS.gene84200:intron | 40.0% | |
| CATTTGGGTCTGTGGAAAAA+AGG | - | chr7.1:33517395-33517414 | None:intergenic | 40.0% | |
| GATCTTGACAAGTAGAGTGA+AGG | - | chr7.1:33515778-33515797 | None:intergenic | 40.0% | |
| GCACAAGAAGTAGGTTTGAA+AGG | - | chr7.1:33515193-33515212 | None:intergenic | 40.0% | |
| GCACTGAATGTGAATAGCAA+TGG | - | chr7.1:33515730-33515749 | None:intergenic | 40.0% | |
| GCATAAGCGCTTGTCATATA+AGG | - | chr7.1:33516287-33516306 | None:intergenic | 40.0% | |
| GCTTTGGCAATTATAGTCAC+AGG | + | chr7.1:33517045-33517064 | MS.gene84200:CDS | 40.0% | |
| GGACTTCTTAATGCAACATG+TGG | + | chr7.1:33515083-33515102 | MS.gene84200:CDS | 40.0% | |
| GGTACTTCTCACTACTTGAA+AGG | + | chr7.1:33517201-33517220 | MS.gene84200:CDS | 40.0% | |
| GTATAAGCTATGAGCGTGTT+TGG | + | chr7.1:33516192-33516211 | MS.gene84200:intron | 40.0% | |
| TAAATTATGGTTGTGGTCCG+TGG | + | chr7.1:33516737-33516756 | MS.gene84200:intron | 40.0% | |
| TAATCCAAAGGTCTTGACCA+AGG | + | chr7.1:33513912-33513931 | MS.gene84200:CDS | 40.0% | |
| TCAAACCTACTTCTTGTGCT+TGG | + | chr7.1:33515194-33515213 | MS.gene84200:CDS | 40.0% | |
| TCGACTTAAGATCAACCACT+TGG | - | chr7.1:33515332-33515351 | None:intergenic | 40.0% | |
| TCTTTCAACTATGGACACAC+AGG | + | chr7.1:33515839-33515858 | MS.gene84200:CDS | 40.0% | |
| TGATCATACTCTTGTGTCCA+AGG | + | chr7.1:33514005-33514024 | MS.gene84200:CDS | 40.0% | |
| TGGTACCAAGAATAACCTCT+TGG | - | chr7.1:33514068-33514087 | None:intergenic | 40.0% | |
| TGTTGTCACAACTGCAATTG+CGG | - | chr7.1:33514356-33514375 | None:intergenic | 40.0% | |
| TTACCATTCTCCAAAAGCCA+TGG | - | chr7.1:33513895-33513914 | None:intergenic | 40.0% | |
| TTTCGCTTTCAAGAACAAGC+TGG | + | chr7.1:33516465-33516484 | MS.gene84200:CDS | 40.0% | |
| TTTGTGCAAAGAACACCCAA+TGG | + | chr7.1:33517267-33517286 | MS.gene84200:CDS | 40.0% | |
| ! | AAGAGGCTGTGATTGGATTT+TGG | + | chr7.1:33516017-33516036 | MS.gene84200:CDS | 40.0% |
| ! | AGAAGAACAACCATGGCTTT+TGG | + | chr7.1:33513882-33513901 | MS.gene84200:CDS | 40.0% |
| ! | CATTTCCTTAGGTGTTGCAT+TGG | + | chr7.1:33516637-33516656 | MS.gene84200:CDS | 40.0% |
| ! | TTGGTAGCAAGATTATGCTG+AGG | - | chr7.1:33516408-33516427 | None:intergenic | 40.0% |
| !! | CATATTTTTGCTCCACTCCA+AGG | - | chr7.1:33515250-33515269 | None:intergenic | 40.0% |
| !!! | AGGCTTATTTGGTGTGCTTT+TGG | + | chr7.1:33516137-33516156 | MS.gene84200:intron | 40.0% |
| !!! | CTTTTTTCCACAGACCCAAA+TGG | + | chr7.1:33517393-33517412 | MS.gene84200:intron | 40.0% |
| !!! | GATTTTGGAGTAGCTTTGGT+TGG | + | chr7.1:33516032-33516051 | MS.gene84200:CDS | 40.0% |
| AACTTCAACCTCCTTGAGAC+AGG | + | chr7.1:33517015-33517034 | MS.gene84200:CDS | 45.0% | |
| AAGCAAGAGAACCTGTCTCA+AGG | - | chr7.1:33517029-33517048 | None:intergenic | 45.0% | |
| AAGGAAGCAAGACATGGACA+TGG | + | chr7.1:33513931-33513950 | MS.gene84200:CDS | 45.0% | |
| AATGCCACCACAAAGTAGAG+AGG | - | chr7.1:33515222-33515241 | None:intergenic | 45.0% | |
| AGAACCCAATGCAACACCTA+AGG | - | chr7.1:33516645-33516664 | None:intergenic | 45.0% | |
| AGGTGAAGGTGAGAACAATG+AGG | + | chr7.1:33515988-33516007 | MS.gene84200:CDS | 45.0% | |
| AGGTTCCAAGCACAAGAAGT+AGG | - | chr7.1:33515202-33515221 | None:intergenic | 45.0% | |
| AGTCACAGGCTTCACTTTAC+AGG | + | chr7.1:33517059-33517078 | MS.gene84200:CDS | 45.0% | |
| AGTTCGAATCCTGGTTGCAA+CGG | + | chr7.1:33515385-33515404 | MS.gene84200:intron | 45.0% | |
| ATGTCCATGTCTTGCTTCCT+TGG | - | chr7.1:33513932-33513951 | None:intergenic | 45.0% | |
| ATTCCTTTCCCCTGGATCAA+AGG | + | chr7.1:33515457-33515476 | MS.gene84200:intron | 45.0% | |
| CAACCAGTCTAATCTGTGTG+CGG | + | chr7.1:33514411-33514430 | MS.gene84200:intron | 45.0% | |
| CAGGATGCATCAGATTCATG+GGG | + | chr7.1:33516367-33516386 | MS.gene84200:intron | 45.0% | |
| CATCAATCACCCTTTGATCC+AGG | - | chr7.1:33515470-33515489 | None:intergenic | 45.0% | |
| CATGCAACAATCACACAGAG+AGG | - | chr7.1:33516970-33516989 | None:intergenic | 45.0% | |
| CTCTCTCTTATTACAGTGGG+AGG | + | chr7.1:33515062-33515081 | MS.gene84200:intron | 45.0% | |
| CTCTCTGTGTGATTGTTGCA+TGG | + | chr7.1:33516968-33516987 | MS.gene84200:CDS | 45.0% | |
| CTGAGAAGACATGTTATGCG+CGG | - | chr7.1:33513968-33513987 | None:intergenic | 45.0% | |
| CTTGGAACCTCTCTACTTTG+TGG | + | chr7.1:33515212-33515231 | MS.gene84200:CDS | 45.0% | |
| GAACAATGAGGCAGAAGAAG+AGG | + | chr7.1:33516000-33516019 | MS.gene84200:CDS | 45.0% | |
| GAGAACCTAAGTTCGAATCC+TGG | + | chr7.1:33515376-33515395 | MS.gene84200:intron | 45.0% | |
| GGCAGATATGGTCGAAATTG+CGG | + | chr7.1:33516803-33516822 | MS.gene84200:intron | 45.0% | |
| GTGAGCTTTCTCACAGAGTA+AGG | + | chr7.1:33514785-33514804 | MS.gene84200:intron | 45.0% | |
| GTGAGTTCGACAAATCGTTC+AGG | + | chr7.1:33515354-33515373 | MS.gene84200:intron | 45.0% | |
| TCAATCACCCTTTGATCCAG+GGG | - | chr7.1:33515468-33515487 | None:intergenic | 45.0% | |
| TCAGCTGCATTGCCAACTAT+TGG | - | chr7.1:33516427-33516446 | None:intergenic | 45.0% | |
| TGACTGCAGGACATTTCCTT+AGG | + | chr7.1:33516626-33516645 | MS.gene84200:intron | 45.0% | |
| TGAGACAGGTTCTCTTGCTT+TGG | + | chr7.1:33517029-33517048 | MS.gene84200:CDS | 45.0% | |
| TGCAACCAGGATTCGAACTT+AGG | - | chr7.1:33515384-33515403 | None:intergenic | 45.0% | |
| TTCCTTTCCCCTGGATCAAA+GGG | + | chr7.1:33515458-33515477 | MS.gene84200:intron | 45.0% | |
| TTGACCAAGGAAGCAAGACA+TGG | + | chr7.1:33513925-33513944 | MS.gene84200:CDS | 45.0% | |
| ! | GTGGAAAAGTGTGGCAGATA+TGG | + | chr7.1:33516791-33516810 | MS.gene84200:intron | 45.0% |
| !! | CAACCATGGCTTTTGGAGAA+TGG | + | chr7.1:33513889-33513908 | MS.gene84200:CDS | 45.0% |
| !! | CGTGTTGGTTAACATCCAAG+AGG | + | chr7.1:33514050-33514069 | MS.gene84200:CDS | 45.0% |
| !! | TTGGAGTAGCTTTGGTTGGT+TGG | + | chr7.1:33516036-33516055 | MS.gene84200:CDS | 45.0% |
| AAGACATGTTATGCGCGGTC+CGG | - | chr7.1:33513963-33513982 | None:intergenic | 50.0% | |
| AAGCAAGACATGGACATGGC+CGG | + | chr7.1:33513935-33513954 | MS.gene84200:CDS | 50.0% | |
| AAGCGAAGCACATCGAACCT+TGG | - | chr7.1:33514025-33514044 | None:intergenic | 50.0% | |
| AAGCTCACACGTTCAGCAAG+TGG | - | chr7.1:33514773-33514792 | None:intergenic | 50.0% | |
| ACCAGGCTTTACTTACCTCC+TGG | + | chr7.1:33515414-33515433 | MS.gene84200:intron | 50.0% | |
| AGCAACAATGGCAGCAGGAA+TGG | - | chr7.1:33514112-33514131 | None:intergenic | 50.0% | |
| AGGAATGGCAGGGAAGAGAA+TGG | - | chr7.1:33514097-33514116 | None:intergenic | 50.0% | |
| AGGGAAGAGAATGGACAGCT+TGG | - | chr7.1:33514088-33514107 | None:intergenic | 50.0% | |
| AGGTTCGATGTGCTTCGCTT+AGG | + | chr7.1:33514025-33514044 | MS.gene84200:CDS | 50.0% | |
| ATGGTTGTGGTCCGTGGTTA+CGG | + | chr7.1:33516743-33516762 | MS.gene84200:intron | 50.0% | |
| CAAGAGAACCTGTCTCAAGG+AGG | - | chr7.1:33517026-33517045 | None:intergenic | 50.0% | |
| CAATTGCAGCCGCGATACAA+GGG | - | chr7.1:33516859-33516878 | None:intergenic | 50.0% | |
| CGCACACAGATTAGACTGGT+TGG | - | chr7.1:33514413-33514432 | None:intergenic | 50.0% | |
| GAAGGTTCTACTGTGAGTGC+AGG | - | chr7.1:33515760-33515779 | None:intergenic | 50.0% | |
| GCAGAAGAAGAGGCTGTGAT+TGG | + | chr7.1:33516010-33516029 | MS.gene84200:CDS | 50.0% | |
| GCCAAGGTAGTGAGCAACAA+TGG | - | chr7.1:33514124-33514143 | None:intergenic | 50.0% | |
| GCCATTGTTGCTCACTACCT+TGG | + | chr7.1:33514120-33514139 | MS.gene84200:CDS | 50.0% | |
| GCTTCCTTGGTCAAGACCTT+TGG | - | chr7.1:33513919-33513938 | None:intergenic | 50.0% | |
| GGAACCTCTCTACTTTGTGG+TGG | + | chr7.1:33515215-33515234 | MS.gene84200:CDS | 50.0% | |
| GGTTCGATGTGCTTCGCTTA+GGG | + | chr7.1:33514026-33514045 | MS.gene84200:CDS | 50.0% | |
| GTTGCTCACTACCTTGGCTT+AGG | + | chr7.1:33514126-33514145 | MS.gene84200:CDS | 50.0% | |
| TAGTGAGCAACAATGGCAGC+AGG | - | chr7.1:33514117-33514136 | None:intergenic | 50.0% | |
| TGGCATTGCTAACCTTGGAG+TGG | + | chr7.1:33515235-33515254 | MS.gene84200:CDS | 50.0% | |
| TGTGGTGGCATTGCTAACCT+TGG | + | chr7.1:33515230-33515249 | MS.gene84200:CDS | 50.0% | |
| TTACCAGGATTCCTTTCCCC+TGG | + | chr7.1:33515449-33515468 | MS.gene84200:intron | 50.0% | |
| TTGTATCGCGGCTGCAATTG+CGG | + | chr7.1:33516859-33516878 | MS.gene84200:intron | 50.0% | |
| !! | AGTAGCTTTGGTTGGTTGGC+TGG | + | chr7.1:33516040-33516059 | MS.gene84200:CDS | 50.0% |
| ACAATGGCAGCAGGAATGGC+AGG | - | chr7.1:33514108-33514127 | None:intergenic | 55.0% | |
| ACCTGTAGGACCGGTGAAGA+AGG | - | chr7.1:33514955-33514974 | None:intergenic | 55.0% | |
| ACGCCGCACACAGATTAGAC+TGG | - | chr7.1:33514417-33514436 | None:intergenic | 55.0% | |
| AGTCTAATCTGTGTGCGGCG+TGG | + | chr7.1:33514416-33514435 | MS.gene84200:intron | 55.0% | |
| CAATGGCAGCAGGAATGGCA+GGG | - | chr7.1:33514107-33514126 | None:intergenic | 55.0% | |
| CACCCTTTGATCCAGGGGAA+AGG | - | chr7.1:33515463-33515482 | None:intergenic | 55.0% | |
| CTGCAATTGCGGTTGCTGAC+TGG | + | chr7.1:33516870-33516889 | MS.gene84200:intron | 55.0% | |
| CTTACCTCCTGGCCGAACTT+CGG | + | chr7.1:33515425-33515444 | MS.gene84200:intron | 55.0% | |
| GATCCAGGGGAAAGGAATCC+TGG | - | chr7.1:33515455-33515474 | None:intergenic | 55.0% | |
| GCAATTGCAGCCGCGATACA+AGG | - | chr7.1:33516860-33516879 | None:intergenic | 55.0% | |
| GCCAGGAGGTAAGTAAAGCC+TGG | - | chr7.1:33515418-33515437 | None:intergenic | 55.0% | |
| GGCAATGCAGCTGAACATGC+AGG | + | chr7.1:33516433-33516452 | MS.gene84200:CDS | 55.0% | |
| TAATCCGAAGTTCGGCCAGG+AGG | - | chr7.1:33515432-33515451 | None:intergenic | 55.0% | |
| TGCTTCGCTTAGGGTCGTGT+TGG | + | chr7.1:33514035-33514054 | MS.gene84200:CDS | 55.0% | |
| TGGCCGAACTTCGGATTACC+AGG | + | chr7.1:33515434-33515453 | MS.gene84200:intron | 55.0% | |
| TGGTAATCCGAAGTTCGGCC+AGG | - | chr7.1:33515435-33515454 | None:intergenic | 55.0% | |
| !! | CAGAGTATCGGCCGTAACCA+CGG | - | chr7.1:33516757-33516776 | None:intergenic | 55.0% |
| GCCTTCTTCACCGGTCCTAC+AGG | + | chr7.1:33514951-33514970 | MS.gene84200:CDS | 60.0% | |
| GGTCAACGACCGTTGCAACC+AGG | - | chr7.1:33515397-33515416 | None:intergenic | 60.0% | |
| GGTTGCAACGGTCGTTGACC+AGG | + | chr7.1:33515397-33515416 | MS.gene84200:intron | 60.0% | |
| GACATGGACATGGCCGGAGC+CGG | + | chr7.1:33513941-33513960 | MS.gene84200:CDS | 65.0% | |
| TGTTATGCGCGGTCCGGCTC+CGG | - | chr7.1:33513957-33513976 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 33513862 | 33517467 | 33513862 | ID=MS.gene84200 |
| chr7.1 | mRNA | 33513862 | 33517467 | 33513862 | ID=MS.gene84200.t1;Parent=MS.gene84200 |
| chr7.1 | exon | 33513862 | 33514152 | 33513862 | ID=MS.gene84200.t1.exon1;Parent=MS.gene84200.t1 |
| chr7.1 | CDS | 33513862 | 33514152 | 33513862 | ID=cds.MS.gene84200.t1;Parent=MS.gene84200.t1 |
| chr7.1 | exon | 33514734 | 33514801 | 33514734 | ID=MS.gene84200.t1.exon2;Parent=MS.gene84200.t1 |
| chr7.1 | CDS | 33514734 | 33514801 | 33514734 | ID=cds.MS.gene84200.t1;Parent=MS.gene84200.t1 |
| chr7.1 | exon | 33514944 | 33514972 | 33514944 | ID=MS.gene84200.t1.exon3;Parent=MS.gene84200.t1 |
| chr7.1 | CDS | 33514944 | 33514972 | 33514944 | ID=cds.MS.gene84200.t1;Parent=MS.gene84200.t1 |
| chr7.1 | exon | 33515078 | 33515274 | 33515078 | ID=MS.gene84200.t1.exon4;Parent=MS.gene84200.t1 |
| chr7.1 | CDS | 33515078 | 33515274 | 33515078 | ID=cds.MS.gene84200.t1;Parent=MS.gene84200.t1 |
| chr7.1 | exon | 33515670 | 33515882 | 33515670 | ID=MS.gene84200.t1.exon5;Parent=MS.gene84200.t1 |
| chr7.1 | CDS | 33515670 | 33515882 | 33515670 | ID=cds.MS.gene84200.t1;Parent=MS.gene84200.t1 |
| chr7.1 | exon | 33515986 | 33516114 | 33515986 | ID=MS.gene84200.t1.exon6;Parent=MS.gene84200.t1 |
| chr7.1 | CDS | 33515986 | 33516114 | 33515986 | ID=cds.MS.gene84200.t1;Parent=MS.gene84200.t1 |
| chr7.1 | exon | 33516370 | 33516486 | 33516370 | ID=MS.gene84200.t1.exon7;Parent=MS.gene84200.t1 |
| chr7.1 | CDS | 33516370 | 33516486 | 33516370 | ID=cds.MS.gene84200.t1;Parent=MS.gene84200.t1 |
| chr7.1 | exon | 33516635 | 33516688 | 33516635 | ID=MS.gene84200.t1.exon8;Parent=MS.gene84200.t1 |
| chr7.1 | CDS | 33516635 | 33516688 | 33516635 | ID=cds.MS.gene84200.t1;Parent=MS.gene84200.t1 |
| chr7.1 | exon | 33516964 | 33517080 | 33516964 | ID=MS.gene84200.t1.exon9;Parent=MS.gene84200.t1 |
| chr7.1 | CDS | 33516964 | 33517080 | 33516964 | ID=cds.MS.gene84200.t1;Parent=MS.gene84200.t1 |
| chr7.1 | exon | 33517198 | 33517288 | 33517198 | ID=MS.gene84200.t1.exon10;Parent=MS.gene84200.t1 |
| chr7.1 | CDS | 33517198 | 33517288 | 33517198 | ID=cds.MS.gene84200.t1;Parent=MS.gene84200.t1 |
| chr7.1 | exon | 33517406 | 33517467 | 33517406 | ID=MS.gene84200.t1.exon11;Parent=MS.gene84200.t1 |
| chr7.1 | CDS | 33517406 | 33517467 | 33517406 | ID=cds.MS.gene84200.t1;Parent=MS.gene84200.t1 |
| Gene Sequence |
| Protein sequence |
