Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038606.t1 | KEH19950.1 | 99.1 | 852 | 8 | 0 | 1 | 852 | 1 | 852 | 0.00E+00 | 1611.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038606.t1 | Q84K16 | 73.7 | 856 | 216 | 3 | 1 | 855 | 1 | 848 | 0.0e+00 | 1199.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038606.t1 | A0A072U2F4 | 99.1 | 852 | 8 | 0 | 1 | 852 | 1 | 852 | 0.0e+00 | 1611.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene038606 | MS.gene021005 | PPI |
| MS.gene038606 | MS.gene29095 | PPI |
| MS.gene038606 | MS.gene052323 | PPI |
| MS.gene038606 | MS.gene017498 | PPI |
| MS.gene038606 | MS.gene031810 | PPI |
| MS.gene038606 | MS.gene006488 | PPI |
| MS.gene038606 | MS.gene75781 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038606.t1 | MTR_8g063690 | 99.061 | 852 | 8 | 0 | 1 | 852 | 1 | 852 | 0.0 | 1733 |
| MS.gene038606.t1 | MTR_5g034780 | 83.353 | 865 | 127 | 5 | 1 | 865 | 1 | 848 | 0.0 | 1446 |
| MS.gene038606.t1 | MTR_2g084610 | 30.328 | 610 | 390 | 14 | 6 | 595 | 4 | 598 | 2.64e-80 | 280 |
| MS.gene038606.t1 | MTR_8g072250 | 24.497 | 596 | 408 | 9 | 4 | 577 | 19 | 594 | 1.70e-54 | 205 |
| MS.gene038606.t1 | MTR_8g104380 | 23.553 | 501 | 347 | 9 | 10 | 499 | 18 | 493 | 3.44e-29 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038606.t1 | AT1G60070 | 73.474 | 852 | 205 | 5 | 1 | 852 | 1 | 831 | 0.0 | 1290 |
| MS.gene038606.t1 | AT1G60070 | 70.495 | 888 | 205 | 6 | 1 | 852 | 1 | 867 | 0.0 | 1269 |
| MS.gene038606.t1 | AT1G23900 | 73.715 | 856 | 216 | 3 | 1 | 855 | 1 | 848 | 0.0 | 1251 |
| MS.gene038606.t1 | AT1G23900 | 73.715 | 856 | 216 | 3 | 1 | 855 | 1 | 848 | 0.0 | 1251 |
| MS.gene038606.t1 | AT1G23900 | 73.578 | 844 | 214 | 3 | 13 | 855 | 1 | 836 | 0.0 | 1230 |
| MS.gene038606.t1 | AT1G23935 | 74.729 | 277 | 58 | 2 | 11 | 287 | 872 | 1136 | 2.71e-127 | 413 |
| MS.gene038606.t1 | AT1G23935 | 53.333 | 180 | 67 | 3 | 501 | 679 | 707 | 870 | 7.02e-40 | 160 |
| MS.gene038606.t1 | AT1G23935 | 65.347 | 101 | 35 | 0 | 506 | 606 | 1130 | 1230 | 3.55e-31 | 132 |
| MS.gene038606.t1 | AT1G23935 | 74.729 | 277 | 58 | 2 | 11 | 287 | 871 | 1135 | 2.84e-127 | 413 |
| MS.gene038606.t1 | AT1G23935 | 53.631 | 179 | 67 | 2 | 501 | 679 | 707 | 869 | 4.58e-41 | 164 |
| MS.gene038606.t1 | AT1G23935 | 65.347 | 101 | 35 | 0 | 506 | 606 | 1129 | 1229 | 3.52e-31 | 132 |
| MS.gene038606.t1 | AT1G23935 | 74.729 | 277 | 58 | 2 | 11 | 287 | 922 | 1186 | 3.80e-127 | 414 |
| MS.gene038606.t1 | AT1G23935 | 53.631 | 179 | 67 | 2 | 501 | 679 | 758 | 920 | 3.72e-41 | 164 |
| MS.gene038606.t1 | AT1G23935 | 65.347 | 101 | 35 | 0 | 506 | 606 | 1180 | 1280 | 3.31e-31 | 132 |
| MS.gene038606.t1 | AT5G22780 | 28.640 | 625 | 412 | 13 | 6 | 610 | 2 | 612 | 1.58e-78 | 275 |
| MS.gene038606.t1 | AT5G22780 | 28.640 | 625 | 412 | 13 | 6 | 610 | 2 | 612 | 1.58e-78 | 275 |
| MS.gene038606.t1 | AT5G22770 | 28.640 | 625 | 412 | 13 | 6 | 610 | 2 | 612 | 2.41e-78 | 275 |
| MS.gene038606.t1 | AT5G22770 | 28.640 | 625 | 412 | 13 | 6 | 610 | 2 | 612 | 2.41e-78 | 275 |
| MS.gene038606.t1 | AT5G22770 | 28.640 | 625 | 412 | 13 | 6 | 610 | 2 | 612 | 2.41e-78 | 275 |
| MS.gene038606.t1 | AT5G22770 | 28.640 | 625 | 412 | 13 | 6 | 610 | 2 | 612 | 2.41e-78 | 275 |
| MS.gene038606.t1 | AT5G22770 | 28.640 | 625 | 412 | 13 | 6 | 610 | 2 | 612 | 2.41e-78 | 275 |
| MS.gene038606.t1 | AT5G22770 | 28.640 | 625 | 412 | 13 | 6 | 610 | 2 | 612 | 2.41e-78 | 275 |
| MS.gene038606.t1 | AT1G31730 | 26.342 | 596 | 397 | 10 | 4 | 577 | 19 | 594 | 3.35e-63 | 230 |
| MS.gene038606.t1 | AT1G48760 | 23.576 | 509 | 337 | 10 | 10 | 499 | 17 | 492 | 4.43e-29 | 125 |
| MS.gene038606.t1 | AT1G48760 | 23.576 | 509 | 337 | 10 | 10 | 499 | 17 | 492 | 4.43e-29 | 125 |
| MS.gene038606.t1 | AT1G48760 | 23.576 | 509 | 337 | 10 | 10 | 499 | 17 | 492 | 4.43e-29 | 125 |
Find 177 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCATTCACTTACTGTTAT+TGG | 0.083799 | 8.3:-38571215 | None:intergenic |
| CAAGAACTTGGTGAGGTTTC+GGG | 0.169967 | 8.3:+38578994 | MS.gene038606:CDS |
| TGCTTCTATGACAGATTTAT+TGG | 0.203908 | 8.3:+38575666 | MS.gene038606:CDS |
| CCAAGAACTTGGTGAGGTTT+CGG | 0.205607 | 8.3:+38578993 | MS.gene038606:CDS |
| GGACTTGCTCTTTGTGCTTT+GGG | 0.207114 | 8.3:+38564628 | MS.gene038606:CDS |
| TGAGAGGTTGCTGCAATTTC+GGG | 0.218038 | 8.3:+38564696 | MS.gene038606:CDS |
| TGAAACTATTGAGCAAATTT+TGG | 0.221383 | 8.3:-38569907 | None:intergenic |
| TTGAGAGGTTGCTGCAATTT+CGG | 0.235944 | 8.3:+38564695 | MS.gene038606:CDS |
| GCTAAGACTGTTGCGGGAAT+TGG | 0.246312 | 8.3:+38566209 | MS.gene038606:CDS |
| TTGCAAAGCATCAAAATATT+AGG | 0.248436 | 8.3:+38573291 | MS.gene038606:CDS |
| CTTGGCTACCCCACACATTT+TGG | 0.250975 | 8.3:+38564324 | MS.gene038606:CDS |
| AAGTCAGTGATCAAGATTTC+AGG | 0.260313 | 8.3:+38569871 | MS.gene038606:CDS |
| TTGGTTGTTTGTGGGGTTCC+TGG | 0.265044 | 8.3:-38575885 | None:intergenic |
| AAACGGCACAGATGTTCTTT+TGG | 0.270935 | 8.3:+38575471 | MS.gene038606:CDS |
| GGATCCAAATATTCGTAAAA+AGG | 0.271446 | 8.3:+38564717 | MS.gene038606:CDS |
| GAGACATCGTGCAACGATTC+TGG | 0.277385 | 8.3:+38569638 | MS.gene038606:CDS |
| GTTGCTTATGACAACAATTA+AGG | 0.291491 | 8.3:-38570958 | None:intergenic |
| TGGATACTGTTTCAAAGAAT+TGG | 0.292576 | 8.3:-38564460 | None:intergenic |
| TGTAGAAAGGATGCCAGTTT+TGG | 0.299639 | 8.3:+38573426 | MS.gene038606:CDS |
| CCGAAACCTCACCAAGTTCT+TGG | 0.305407 | 8.3:-38578993 | None:intergenic |
| TTGAACACACTCATACAAAA+TGG | 0.308234 | 8.3:-38567669 | None:intergenic |
| GGGACTTGCTCTTTGTGCTT+TGG | 0.309614 | 8.3:+38564627 | MS.gene038606:CDS |
| CATAAAGGTAGCTTGGATAT+TGG | 0.315097 | 8.3:-38575904 | None:intergenic |
| ACTCCAGCGCCGAGCTCTTC+TGG | 0.319211 | 8.3:+38573595 | MS.gene038606:CDS |
| TCAGTTTCTTCAGTTGCTCT+TGG | 0.327579 | 8.3:+38576400 | MS.gene038606:intron |
| CCTTGAACTTATTTATGTTC+TGG | 0.331374 | 8.3:+38569797 | MS.gene038606:CDS |
| ACAGTCTTAGCAATTTGATA+TGG | 0.339446 | 8.3:-38566197 | None:intergenic |
| GCTTGGATATTGGTTGTTTG+TGG | 0.344286 | 8.3:-38575894 | None:intergenic |
| AAAATCTGTATATGCATTAG+AGG | 0.356917 | 8.3:-38575934 | None:intergenic |
| AAGGGAACCGATTTCATCAT+TGG | 0.357743 | 8.3:+38575591 | MS.gene038606:CDS |
| CAAATTGCTAAGACTGTTGC+GGG | 0.361403 | 8.3:+38566203 | MS.gene038606:CDS |
| GAACATTTGTTCAGCAGAAA+TGG | 0.373763 | 8.3:+38564651 | MS.gene038606:CDS |
| CCCAGCAACTTTGTTTGACT+CGG | 0.380709 | 8.3:-38567642 | None:intergenic |
| CTTGGATATTGGTTGTTTGT+GGG | 0.381909 | 8.3:-38575893 | None:intergenic |
| ACCGAGTCAAACAAAGTTGC+TGG | 0.388455 | 8.3:+38567641 | MS.gene038606:CDS |
| AATCTTGATCACTGACTTCA+AGG | 0.392658 | 8.3:-38569866 | None:intergenic |
| ATTTCCTAAAAGATGAAGTA+TGG | 0.393292 | 8.3:+38570931 | MS.gene038606:CDS |
| ATTGGGCCCTTTCCATTAGC+AGG | 0.393305 | 8.3:-38576446 | None:intergenic |
| GGCAATACTCTCCCTGCTAA+TGG | 0.398269 | 8.3:+38576434 | MS.gene038606:CDS |
| AAAGTCTCCTCATCCAAAAC+TGG | 0.402237 | 8.3:-38573439 | None:intergenic |
| ACATTAGCTTGGACATATTC+CGG | 0.402551 | 8.3:-38564290 | None:intergenic |
| CTAAGACTGTTGCGGGAATT+GGG | 0.408982 | 8.3:+38566210 | MS.gene038606:CDS |
| ATGTGGTGCCTTGGAGAGTA+TGG | 0.411085 | 8.3:+38571149 | MS.gene038606:CDS |
| AGCAATTTGATATGGAGAAA+AGG | 0.412858 | 8.3:-38566189 | None:intergenic |
| TCACCAGAGTATGATATTGC+TGG | 0.413853 | 8.3:+38566156 | MS.gene038606:CDS |
| ACTTTCAATGCTAGGAGGGC+TGG | 0.417191 | 8.3:+38573457 | MS.gene038606:CDS |
| GTAGAAATGCACAGAAGGTT+TGG | 0.419655 | 8.3:+38566098 | MS.gene038606:intron |
| AGGTAACCTATTCTCTTCTC+TGG | 0.420513 | 8.3:-38564387 | None:intergenic |
| CTTTCAATGCTAGGAGGGCT+GGG | 0.423217 | 8.3:+38573458 | MS.gene038606:CDS |
| CCGCGAAGAGAGCTTCAATA+AGG | 0.431659 | 8.3:-38572842 | None:intergenic |
| CCAGAACATAAATAAGTTCA+AGG | 0.436916 | 8.3:-38569797 | None:intergenic |
| CCTTATTGAAGCTCTCTTCG+CGG | 0.438439 | 8.3:+38572842 | MS.gene038606:CDS |
| TCTCTTCATCCATGCGTTTG+AGG | 0.438936 | 8.3:+38562774 | MS.gene038606:CDS |
| AGCAACGCTTCCAAGCTTCA+TGG | 0.440064 | 8.3:+38570975 | MS.gene038606:CDS |
| GCAATTTGATATGGAGAAAA+GGG | 0.440931 | 8.3:-38566188 | None:intergenic |
| GTACATTGATCAGATGGTTA+AGG | 0.443796 | 8.3:+38570467 | MS.gene038606:CDS |
| TGTGCAGGAGGTGATTCAAT+AGG | 0.448975 | 8.3:-38575523 | None:intergenic |
| TCACGAGCATCTTCAACTGC+TGG | 0.449881 | 8.3:+38575640 | MS.gene038606:CDS |
| GGGAGAGTATTGCCGCTAGC+TGG | 0.454118 | 8.3:-38576425 | None:intergenic |
| GCAGTTATAGACGGATTAAC+CGG | 0.457417 | 8.3:-38575816 | None:intergenic |
| ATAGATGAGTTGCTTTGTGC+AGG | 0.457462 | 8.3:-38575538 | None:intergenic |
| AGATCATCCAATGATGAAAT+CGG | 0.457993 | 8.3:-38575598 | None:intergenic |
| AGATCTTACCACAAAAGAAA+TGG | 0.459576 | 8.3:+38572810 | MS.gene038606:CDS |
| ATACCTTTGGAACTGCTGCC+TGG | 0.462796 | 8.3:-38575962 | None:intergenic |
| GGATGAAGAGAACGGATTCA+TGG | 0.464867 | 8.3:-38562762 | None:intergenic |
| GGATTTCCAGAGAAGAGAAT+AGG | 0.466535 | 8.3:+38564381 | MS.gene038606:CDS |
| TCATACAAATCAGTATATAG+TGG | 0.470269 | 8.3:+38564606 | MS.gene038606:CDS |
| ATTAGAGGACAAATTCATAA+AGG | 0.470342 | 8.3:-38575919 | None:intergenic |
| ATTTCAAACGTCAACAGAAC+AGG | 0.476105 | 8.3:+38571025 | MS.gene038606:CDS |
| AACTTCTCCCTTCAGATATG+TGG | 0.477009 | 8.3:+38569566 | MS.gene038606:intron |
| ACAAATTCATAAAGGTAGCT+TGG | 0.477654 | 8.3:-38575911 | None:intergenic |
| AGTTGAAGCTTCATCCTCTC+AGG | 0.479918 | 8.3:+38578948 | MS.gene038606:intron |
| TGCAGCAACCTCTCAACCTC+TGG | 0.481063 | 8.3:-38564688 | None:intergenic |
| AGGATTCTGATGCTTCAATT+CGG | 0.483694 | 8.3:+38569766 | MS.gene038606:intron |
| GAAAATTTACCTTTCCATGT+TGG | 0.487286 | 8.3:-38576496 | None:intergenic |
| AGAGATATTCTCCAAGAACT+TGG | 0.487974 | 8.3:+38578982 | MS.gene038606:CDS |
| ATTCTCTTCTCTGGAAATCC+AGG | 0.488886 | 8.3:-38564378 | None:intergenic |
| GATGCAGCTTCAACTCCAAC+AGG | 0.491479 | 8.3:+38573490 | MS.gene038606:CDS |
| AAATAATAGTTCAGTACAAA+GGG | 0.492254 | 8.3:+38573219 | MS.gene038606:CDS |
| GTGCTTGCAATCAATATCCT+TGG | 0.492845 | 8.3:+38567728 | MS.gene038606:CDS |
| GGCTGTGAGTGCTGACACTC+AGG | 0.493191 | 8.3:+38569608 | MS.gene038606:CDS |
| CCACCAGAAGAGCTCGGCGC+TGG | 0.496548 | 8.3:-38573598 | None:intergenic |
| TTTCGTCAACAAGCAACATA+AGG | 0.502764 | 8.3:-38564413 | None:intergenic |
| AACATCCACAGCATCTGATT+CGG | 0.507884 | 8.3:-38572758 | None:intergenic |
| TCAGTTGTGTCACAACAGTC+TGG | 0.513473 | 8.3:+38573655 | MS.gene038606:CDS |
| TACCACAAAAGAAATGGCTC+TGG | 0.514103 | 8.3:+38572816 | MS.gene038606:CDS |
| ATGAAAATGACCAACACTAC+AGG | 0.514474 | 8.3:+38564265 | MS.gene038606:CDS |
| ATGAGGAGACTTTCAATGCT+AGG | 0.517669 | 8.3:+38573449 | MS.gene038606:CDS |
| GAAATAATAGTTCAGTACAA+AGG | 0.518955 | 8.3:+38573218 | MS.gene038606:CDS |
| TCTCTTAGTAAGCCAGTAGC+AGG | 0.520381 | 8.3:-38565255 | None:intergenic |
| GACTTGCTCTTTGTGCTTTG+GGG | 0.523324 | 8.3:+38564629 | MS.gene038606:CDS |
| ACAGATTTGACAACTCCATT+CGG | 0.525220 | 8.3:-38573529 | None:intergenic |
| TACTCTCCCTGCTAATGGAA+AGG | 0.526380 | 8.3:+38576439 | MS.gene038606:CDS |
| TCCTCTGGCCCGTCAGCAAG+TGG | 0.527298 | 8.3:+38575697 | MS.gene038606:CDS |
| TACGGTGTATCCATGAAGCT+TGG | 0.527339 | 8.3:-38570985 | None:intergenic |
| TCCATTTGACCAAAATGTGT+GGG | 0.528861 | 8.3:-38564333 | None:intergenic |
| CGTGTTGCAATGTGGTGCCT+TGG | 0.531783 | 8.3:+38571140 | MS.gene038606:CDS |
| ACTCTCCCTGCTAATGGAAA+GGG | 0.532051 | 8.3:+38576440 | MS.gene038606:CDS |
| CTCAAGTTGATATCATCTCC+TGG | 0.532466 | 8.3:+38564360 | MS.gene038606:CDS |
| CTAATGTTCATCCACATGCT+TGG | 0.535489 | 8.3:+38564306 | MS.gene038606:CDS |
| TGCTTGCAAAACTGCGGCAG+AGG | 0.537918 | 8.3:+38564194 | MS.gene038606:CDS |
| TTTGCTGCAATTCTAGCACT+AGG | 0.538532 | 8.3:-38573244 | None:intergenic |
| CATGTGGATGAACATTAGCT+TGG | 0.545929 | 8.3:-38564301 | None:intergenic |
| GGCTCGTGACCTTGCACCAG+AGG | 0.547470 | 8.3:+38564672 | MS.gene038606:CDS |
| AGGTTTGGTGAGAACTCTAA+AGG | 0.547914 | 8.3:+38566113 | MS.gene038606:CDS |
| CTCTCGAATGCAGTTATAGA+CGG | 0.549489 | 8.3:-38575825 | None:intergenic |
| TTGGATATTGGTTGTTTGTG+GGG | 0.553313 | 8.3:-38575892 | None:intergenic |
| AGCTCTTGAACATATTAGAA+AGG | 0.554006 | 8.3:+38565344 | MS.gene038606:CDS |
| GGCACTGAACATGCTGATGA+AGG | 0.554525 | 8.3:+38569587 | MS.gene038606:CDS |
| AGACTAACTGAAGGTCCTGT+TGG | 0.555016 | 8.3:-38573505 | None:intergenic |
| AGTCAGTGATCAAGATTTCA+GGG | 0.555114 | 8.3:+38569872 | MS.gene038606:CDS |
| TATTCCGGTGCCTGTAGTGT+TGG | 0.557877 | 8.3:-38564275 | None:intergenic |
| ACCTCTCAACCTCTGGTGCA+AGG | 0.558056 | 8.3:-38564681 | None:intergenic |
| TACTAACAGCCAACATGGAA+AGG | 0.559428 | 8.3:+38576487 | MS.gene038606:CDS |
| ATATCATACTCTGTACAAGA+AGG | 0.560662 | 8.3:-38572868 | None:intergenic |
| TTGTCTTGAATAGAAAACAA+TGG | 0.561491 | 8.3:+38575792 | MS.gene038606:intron |
| AAAGCTTACCACTTGCTGAC+GGG | 0.561832 | 8.3:-38575705 | None:intergenic |
| TCAAATTGCTAAGACTGTTG+CGG | 0.564454 | 8.3:+38566202 | MS.gene038606:CDS |
| GAGAAGAGAATAGGTTACCT+TGG | 0.569333 | 8.3:+38564390 | MS.gene038606:CDS |
| GATCTGGTACATTGATCAGA+TGG | 0.569583 | 8.3:+38570461 | MS.gene038606:CDS |
| TTCAATCTCTCAAAACAGCC+AGG | 0.570001 | 8.3:+38575867 | MS.gene038606:CDS |
| TTCCATTTGACCAAAATGTG+TGG | 0.570770 | 8.3:-38564334 | None:intergenic |
| ATGACCAACACTACAGGCAC+CGG | 0.571692 | 8.3:+38564271 | MS.gene038606:CDS |
| GATGGTTAAGGTTCTGTCCA+AGG | 0.572291 | 8.3:+38570479 | MS.gene038606:CDS |
| TGCCTTGTATAATGCTCGTA+CGG | 0.572677 | 8.3:-38571003 | None:intergenic |
| TTGAATAGAAAACAATGGAC+CGG | 0.575202 | 8.3:+38575797 | MS.gene038606:intron |
| AAAGTTACTAACAGCCAACA+TGG | 0.576120 | 8.3:+38576482 | MS.gene038606:CDS |
| GATTACTAACCTCAAACGCA+TGG | 0.576240 | 8.3:-38562783 | None:intergenic |
| AAGACAAGAAGTTCTAATGT+TGG | 0.577873 | 8.3:+38564434 | MS.gene038606:CDS |
| CATAAAGAAAGTCCCAGACC+TGG | 0.578337 | 8.3:+38565215 | MS.gene038606:CDS |
| ACAGTTCTACACTTGTAGAA+AGG | 0.580352 | 8.3:+38573413 | MS.gene038606:intron |
| ACCTTGCACCAGAGGTTGAG+AGG | 0.580430 | 8.3:+38564680 | MS.gene038606:CDS |
| CATACAAATCAGTATATAGT+GGG | 0.580791 | 8.3:+38564607 | MS.gene038606:CDS |
| ATAAATCGCCATACTCTCCA+AGG | 0.583752 | 8.3:-38571157 | None:intergenic |
| CCGAGTCAAACAAAGTTGCT+GGG | 0.584005 | 8.3:+38567642 | MS.gene038606:CDS |
| AGATCAAGCAAATCTAGAAG+AGG | 0.584518 | 8.3:-38573556 | None:intergenic |
| CACCGTACGAGCATTATACA+AGG | 0.585438 | 8.3:+38571001 | MS.gene038606:CDS |
| ATGCCAGCAATATCATACTC+TGG | 0.585818 | 8.3:-38566159 | None:intergenic |
| ACCACTTGCTGACGGGCCAG+AGG | 0.586267 | 8.3:-38575698 | None:intergenic |
| CAATGTACCAGATCTTCTCA+AGG | 0.590800 | 8.3:-38570452 | None:intergenic |
| CAAAGCTTACCACTTGCTGA+CGG | 0.591404 | 8.3:-38575706 | None:intergenic |
| TTGGGCCCTTTCCATTAGCA+GGG | 0.592313 | 8.3:-38576445 | None:intergenic |
| TTTCCAGGCAGCAGTTCCAA+AGG | 0.593047 | 8.3:+38575959 | MS.gene038606:CDS |
| TATGAACGACATACTTGCCC+AGG | 0.596648 | 8.3:+38566260 | MS.gene038606:CDS |
| GATGAGTTGCTTTGTGCAGG+AGG | 0.598544 | 8.3:-38575535 | None:intergenic |
| AAGAACTTGGTGAGGTTTCG+GGG | 0.598872 | 8.3:+38578995 | MS.gene038606:CDS |
| CATTCGAGAGCAGCTCCTTG+AGG | 0.599217 | 8.3:+38575838 | MS.gene038606:CDS |
| GGTGATTCAATAGGTGCAGA+AGG | 0.605760 | 8.3:-38575514 | None:intergenic |
| CAGAACATAAATAAGTTCAA+GGG | 0.606658 | 8.3:-38569796 | None:intergenic |
| CCAGCGCCGAGCTCTTCTGG+TGG | 0.610460 | 8.3:+38573598 | MS.gene038606:CDS |
| TATTCTCCAAGAACTTGGTG+AGG | 0.611289 | 8.3:+38578987 | MS.gene038606:CDS |
| AAATCACCACCAGAAGAGCT+CGG | 0.611516 | 8.3:-38573604 | None:intergenic |
| CAACAAGCAACATAAGGCCA+AGG | 0.611915 | 8.3:-38564407 | None:intergenic |
| GGTCACCGAATCAGATGCTG+TGG | 0.614079 | 8.3:+38572753 | MS.gene038606:intron |
| CCTTCAGTTAGTCTTCCGAA+TGG | 0.616811 | 8.3:+38573514 | MS.gene038606:CDS |
| TTATTGTAGAAATGCACAGA+AGG | 0.617727 | 8.3:+38566093 | MS.gene038606:intron |
| TATCATACTCTGTACAAGAA+GGG | 0.623158 | 8.3:-38572867 | None:intergenic |
| AGGAGACTTTCAATGCTAGG+AGG | 0.624598 | 8.3:+38573452 | MS.gene038606:CDS |
| ATAATGAGCATTGAAGATAA+CGG | 0.625734 | 8.3:+38567695 | MS.gene038606:CDS |
| GAGATTGAATGTCAACCTCA+AGG | 0.626614 | 8.3:-38575853 | None:intergenic |
| TTACTAAGAGAGAAGCATCA+TGG | 0.629530 | 8.3:+38565267 | MS.gene038606:CDS |
| AAACGCATGGATGAAGAGAA+CGG | 0.630692 | 8.3:-38562770 | None:intergenic |
| TTGTGGTAAGATCTGATGCA+TGG | 0.635838 | 8.3:-38572801 | None:intergenic |
| CTGTTGCGGGAATTGGGCGA+AGG | 0.636293 | 8.3:+38566216 | MS.gene038606:CDS |
| CAAATCGGGATAACAACACC+AGG | 0.636493 | 8.3:+38567762 | MS.gene038606:CDS |
| AATGTACCAGATCTTCTCAA+GGG | 0.641590 | 8.3:-38570451 | None:intergenic |
| CCATTTGACCAAAATGTGTG+GGG | 0.650020 | 8.3:-38564332 | None:intergenic |
| GGAGACTTTCAATGCTAGGA+GGG | 0.651603 | 8.3:+38573453 | MS.gene038606:CDS |
| GAATGGAGTTGTCAAATCTG+TGG | 0.652542 | 8.3:+38573531 | MS.gene038606:CDS |
| CAGGAGATGATATCAACTTG+AGG | 0.660137 | 8.3:-38564359 | None:intergenic |
| CCATTCGGAAGACTAACTGA+AGG | 0.679774 | 8.3:-38573514 | None:intergenic |
| CATACGTGCTTGCAAAACTG+CGG | 0.682704 | 8.3:+38564188 | MS.gene038606:CDS |
| ATGAGCATTGAAGATAACGG+TGG | 0.685116 | 8.3:+38567698 | MS.gene038606:CDS |
| TCTAATACAATTGACCTGAG+AGG | 0.689048 | 8.3:-38578962 | None:intergenic |
| TTGCTCTTGGATCCAGCTAG+CGG | 0.698582 | 8.3:+38576413 | MS.gene038606:CDS |
| GTGTGGGGTAGCCAAGCATG+TGG | 0.704313 | 8.3:-38564317 | None:intergenic |
| CAGTGATCAAGATTTCAGGG+AGG | 0.799054 | 8.3:+38569875 | MS.gene038606:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 38562764 | 38579036 | 38562764 | ID=MS.gene038606 |
| chr8.3 | mRNA | 38562764 | 38579036 | 38562764 | ID=MS.gene038606.t1;Parent=MS.gene038606 |
| chr8.3 | exon | 38562764 | 38562795 | 38562764 | ID=MS.gene038606.t1.exon1;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38562764 | 38562795 | 38562764 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| chr8.3 | exon | 38564173 | 38564475 | 38564173 | ID=MS.gene038606.t1.exon2;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38564173 | 38564475 | 38564173 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| chr8.3 | exon | 38564597 | 38564738 | 38564597 | ID=MS.gene038606.t1.exon3;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38564597 | 38564738 | 38564597 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| chr8.3 | exon | 38565192 | 38565365 | 38565192 | ID=MS.gene038606.t1.exon4;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38565192 | 38565365 | 38565192 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| chr8.3 | exon | 38566102 | 38566281 | 38566102 | ID=MS.gene038606.t1.exon5;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38566102 | 38566281 | 38566102 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| chr8.3 | exon | 38567629 | 38567783 | 38567629 | ID=MS.gene038606.t1.exon6;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38567629 | 38567783 | 38567629 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| chr8.3 | exon | 38569581 | 38569671 | 38569581 | ID=MS.gene038606.t1.exon7;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38569581 | 38569671 | 38569581 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| chr8.3 | exon | 38569768 | 38569931 | 38569768 | ID=MS.gene038606.t1.exon8;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38569768 | 38569931 | 38569768 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| chr8.3 | exon | 38570446 | 38570500 | 38570446 | ID=MS.gene038606.t1.exon9;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38570446 | 38570500 | 38570446 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| chr8.3 | exon | 38570924 | 38571046 | 38570924 | ID=MS.gene038606.t1.exon10;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38570924 | 38571046 | 38570924 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| chr8.3 | exon | 38571128 | 38571223 | 38571128 | ID=MS.gene038606.t1.exon11;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38571128 | 38571223 | 38571128 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| chr8.3 | exon | 38572754 | 38572881 | 38572754 | ID=MS.gene038606.t1.exon12;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38572754 | 38572881 | 38572754 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| chr8.3 | exon | 38573208 | 38573312 | 38573208 | ID=MS.gene038606.t1.exon13;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38573208 | 38573312 | 38573208 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| chr8.3 | exon | 38573417 | 38573676 | 38573417 | ID=MS.gene038606.t1.exon14;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38573417 | 38573676 | 38573417 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| chr8.3 | exon | 38575452 | 38575718 | 38575452 | ID=MS.gene038606.t1.exon15;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38575452 | 38575718 | 38575452 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| chr8.3 | exon | 38575805 | 38575980 | 38575805 | ID=MS.gene038606.t1.exon16;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38575805 | 38575980 | 38575805 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| chr8.3 | exon | 38576404 | 38576508 | 38576404 | ID=MS.gene038606.t1.exon17;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38576404 | 38576508 | 38576404 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| chr8.3 | exon | 38578950 | 38579036 | 38578950 | ID=MS.gene038606.t1.exon18;Parent=MS.gene038606.t1 |
| chr8.3 | CDS | 38578950 | 38579036 | 38578950 | ID=cds.MS.gene038606.t1;Parent=MS.gene038606.t1 |
| Gene Sequence |
| Protein sequence |