Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038660.t1 | RHN63325.1 | 96.9 | 319 | 10 | 0 | 1 | 319 | 51 | 369 | 5.00E-151 | 543.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038660.t1 | Q8H112 | 75.9 | 323 | 65 | 5 | 5 | 319 | 3 | 320 | 6.9e-109 | 395.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038660.t1 | A0A072V0M0 | 96.9 | 319 | 10 | 0 | 1 | 319 | 1 | 319 | 3.6e-151 | 543.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene038660 | MS.gene37223 | PPI |
| MS.gene038660 | MS.gene011450 | PPI |
| MS.gene038660 | MS.gene71059 | PPI |
| MS.gene038660 | MS.gene62822 | PPI |
| MS.gene038660 | MS.gene69468 | PPI |
| MS.gene038660 | MS.gene033404 | PPI |
| MS.gene038660 | MS.gene009203 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038660.t1 | MTR_4g102440 | 96.552 | 319 | 11 | 0 | 1 | 319 | 1 | 319 | 0.0 | 632 |
| MS.gene038660.t1 | MTR_5g011220 | 78.671 | 286 | 56 | 3 | 36 | 319 | 29 | 311 | 7.33e-165 | 461 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038660.t1 | AT4G22890 | 81.429 | 280 | 47 | 3 | 40 | 319 | 46 | 320 | 2.93e-167 | 468 |
| MS.gene038660.t1 | AT4G22890 | 81.429 | 280 | 47 | 3 | 40 | 319 | 46 | 320 | 2.93e-167 | 468 |
| MS.gene038660.t1 | AT4G22890 | 81.071 | 280 | 45 | 3 | 40 | 319 | 46 | 317 | 1.85e-166 | 466 |
| MS.gene038660.t1 | AT4G22890 | 80.714 | 280 | 47 | 3 | 40 | 319 | 46 | 318 | 2.40e-165 | 463 |
| MS.gene038660.t1 | AT4G11960 | 75.159 | 314 | 72 | 4 | 7 | 319 | 1 | 309 | 1.59e-161 | 453 |
| MS.gene038660.t1 | AT4G11960 | 84.127 | 252 | 39 | 1 | 68 | 319 | 42 | 292 | 3.95e-156 | 439 |
| MS.gene038660.t1 | AT4G22890 | 81.226 | 261 | 44 | 3 | 40 | 300 | 46 | 301 | 1.58e-153 | 432 |
| MS.gene038660.t1 | AT5G59400 | 29.474 | 190 | 102 | 7 | 139 | 302 | 75 | 258 | 1.42e-11 | 64.7 |
Find 74 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTCTTTGTCGCTCAAAAT+TGG | 0.191899 | 8.3:-39278674 | None:intergenic |
| AAAATTTCTTGAAGCTTCTA+TGG | 0.224918 | 8.3:+39278634 | MS.gene038660:CDS |
| ACTGAAAATACCTCCTTCTT+TGG | 0.249747 | 8.3:+39280985 | MS.gene038660:CDS |
| TTCTTCCTTGATGATATAAC+TGG | 0.275096 | 8.3:+39280321 | MS.gene038660:CDS |
| AGAATGGAATAAAGGGAGTT+TGG | 0.277890 | 8.3:-39277662 | None:intergenic |
| GCTTCTATGGCTTATGTATC+TGG | 0.293115 | 8.3:+39278647 | MS.gene038660:CDS |
| AATCACAAAATCTTTGATAA+TGG | 0.309190 | 8.3:-39280862 | None:intergenic |
| CCAGCCACTGTGGTTGCATT+AGG | 0.325068 | 8.3:+39279511 | MS.gene038660:CDS |
| ACTTATGCATTACTTCATTC+TGG | 0.341550 | 8.3:-39281696 | None:intergenic |
| GAATGGAATAAAGGGAGTTT+GGG | 0.363798 | 8.3:-39277661 | None:intergenic |
| GTGCAGCCTTCGAAGTAAAA+AGG | 0.365618 | 8.3:+39279048 | MS.gene038660:CDS |
| TTAACAGTCATTCTATTATG+AGG | 0.366346 | 8.3:+39278411 | MS.gene038660:intron |
| CAAGTGAAAATGAAACTAAA+AGG | 0.380242 | 8.3:-39280789 | None:intergenic |
| TGTTGATCTGCAGTGGCTTT+AGG | 0.383078 | 8.3:-39277759 | None:intergenic |
| AGAGCATTTGACTTTGTTGT+TGG | 0.383266 | 8.3:-39281037 | None:intergenic |
| CTGAAAATACCTCCTTCTTT+GGG | 0.406319 | 8.3:+39280986 | MS.gene038660:CDS |
| TTTGATCTATGCTACAATAT+GGG | 0.409201 | 8.3:-39278082 | None:intergenic |
| CCTAATGCAACCACAGTGGC+TGG | 0.425616 | 8.3:-39279511 | None:intergenic |
| TTCAGTTCCGCAGTTTGGAC+AGG | 0.427658 | 8.3:-39280968 | None:intergenic |
| GGTGCAGAACATGGAGGAGG+GGG | 0.462753 | 8.3:-39277639 | None:intergenic |
| CAGTGGCTGGGACGTTCAGC+AGG | 0.463026 | 8.3:-39279498 | None:intergenic |
| TGTTAAAGTGAAGGCTACTT+TGG | 0.472750 | 8.3:-39277616 | None:intergenic |
| TAAGTTGAAACTGAATCTAA+AGG | 0.474896 | 8.3:+39278700 | MS.gene038660:CDS |
| TAACAGTCATTCTATTATGA+GGG | 0.484496 | 8.3:+39278412 | MS.gene038660:intron |
| TGGGGTGCAGAACATGGAGG+AGG | 0.491120 | 8.3:-39277642 | None:intergenic |
| GGGAGTGAAATTGTTGTTGA+GGG | 0.502581 | 8.3:+39279019 | MS.gene038660:CDS |
| GGGTGCAGAACATGGAGGAG+GGG | 0.507293 | 8.3:-39277640 | None:intergenic |
| GAAAATGAAACTAAAAGGCT+CGG | 0.513601 | 8.3:-39280784 | None:intergenic |
| GCGGCGAAGGCATACGTGGC+GGG | 0.513672 | 8.3:-39277718 | None:intergenic |
| AACCAGCTGTGGAACTGAAA+TGG | 0.521644 | 8.3:+39281641 | MS.gene038660:intron |
| GGAGTTTGGGGTGCAGAACA+TGG | 0.522105 | 8.3:-39277648 | None:intergenic |
| GTCATTCTATTATGAGGGAA+AGG | 0.537540 | 8.3:+39278417 | MS.gene038660:intron |
| CAGTGGCTTTAGGCGAAAGT+AGG | 0.539506 | 8.3:-39277749 | None:intergenic |
| CAAATCCAGTTATATCATCA+AGG | 0.541384 | 8.3:-39280326 | None:intergenic |
| GGGGTGCAGAACATGGAGGA+GGG | 0.555413 | 8.3:-39277641 | None:intergenic |
| ATCTCAAGGAGGAACTTATG+TGG | 0.560599 | 8.3:+39278467 | MS.gene038660:CDS |
| TACTTTGGTAGCAGTGAACA+TGG | 0.562646 | 8.3:-39277601 | None:intergenic |
| TTCTTGCTCAAGTTCACCAA+CGG | 0.563076 | 8.3:-39278120 | None:intergenic |
| TCAGTTCCGCAGTTTGGACA+GGG | 0.564708 | 8.3:-39280967 | None:intergenic |
| TGAGATCACTTATTTGCTAG+AGG | 0.565242 | 8.3:+39280347 | MS.gene038660:CDS |
| GTAGGAGTAATCTGCGGCGA+AGG | 0.572243 | 8.3:-39277731 | None:intergenic |
| TGACAGTATAGTCCCAAAGA+AGG | 0.573955 | 8.3:-39280998 | None:intergenic |
| AGGGAGTGAAATTGTTGTTG+AGG | 0.575033 | 8.3:+39279018 | MS.gene038660:CDS |
| AAAATGAAACTAAAAGGCTC+GGG | 0.577266 | 8.3:-39280783 | None:intergenic |
| ATCTAGCTCTATCACTAACA+AGG | 0.579354 | 8.3:+39280838 | MS.gene038660:CDS |
| CTAATGCAACCACAGTGGCT+GGG | 0.581180 | 8.3:-39279510 | None:intergenic |
| TCTCAAGGAGGAACTTATGT+GGG | 0.582901 | 8.3:+39278468 | MS.gene038660:CDS |
| TGAAGAATTTGATAATCTCA+AGG | 0.586912 | 8.3:+39278453 | MS.gene038660:CDS |
| AACTGAAATGGTGTATGACT+CGG | 0.590231 | 8.3:+39281653 | MS.gene038660:CDS |
| TTACTTCGAAGGCTGCACCT+TGG | 0.594902 | 8.3:-39279043 | None:intergenic |
| TCTAGCTCTATCACTAACAA+GGG | 0.599765 | 8.3:+39280839 | MS.gene038660:CDS |
| ATCTGCGGCGAAGGCATACG+TGG | 0.603458 | 8.3:-39277722 | None:intergenic |
| ATACTGTCAATTTCAAGTGG+TGG | 0.605247 | 8.3:+39281012 | MS.gene038660:CDS |
| AAATTGTTGTTGAGGGTCCA+AGG | 0.606961 | 8.3:+39279026 | MS.gene038660:CDS |
| GATACCTTGTTGATCTGCAG+TGG | 0.611032 | 8.3:-39277766 | None:intergenic |
| AAGGAGGAACTTATGTGGGA+AGG | 0.615460 | 8.3:+39278472 | MS.gene038660:CDS |
| TAGAGCTAGATATACAATGA+GGG | 0.616671 | 8.3:-39280826 | None:intergenic |
| TCTTTAAATAGTCAACAGAC+AGG | 0.629626 | 8.3:-39279471 | None:intergenic |
| ACTGAAATGGTGTATGACTC+GGG | 0.632804 | 8.3:+39281654 | MS.gene038660:CDS |
| GATCTATGCTACAATATGGG+AGG | 0.633005 | 8.3:-39278079 | None:intergenic |
| ACTATACTGTCAATTTCAAG+TGG | 0.637003 | 8.3:+39281009 | MS.gene038660:CDS |
| CAGTATAGTCCCAAAGAAGG+AGG | 0.645974 | 8.3:-39280995 | None:intergenic |
| ATAGAGCTAGATATACAATG+AGG | 0.647386 | 8.3:-39280827 | None:intergenic |
| AGAGCTAGATATACAATGAG+GGG | 0.654956 | 8.3:-39280825 | None:intergenic |
| TGCGGCGAAGGCATACGTGG+CGG | 0.660060 | 8.3:-39277719 | None:intergenic |
| AATGGAATAAAGGGAGTTTG+GGG | 0.668538 | 8.3:-39277660 | None:intergenic |
| AAGGGTCCCTGTCCAAACTG+CGG | 0.678881 | 8.3:+39280961 | MS.gene038660:intron |
| ACGTGGCGGGAGTTGAAGTG+AGG | 0.680548 | 8.3:-39277705 | None:intergenic |
| AAAGCCACTGCAGATCAACA+AGG | 0.689088 | 8.3:+39277762 | MS.gene038660:CDS |
| GCTGAACGTCCCAGCCACTG+TGG | 0.709181 | 8.3:+39279501 | MS.gene038660:CDS |
| GTTTGGGGTGCAGAACATGG+AGG | 0.719853 | 8.3:-39277645 | None:intergenic |
| AGAATTTGATAATCTCAAGG+AGG | 0.725675 | 8.3:+39278456 | MS.gene038660:CDS |
| CAATCCTAATGCAACCACAG+TGG | 0.746857 | 8.3:-39279515 | None:intergenic |
| GCGAAAGTAGGAGTAATCTG+CGG | 0.775526 | 8.3:-39277737 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATCTTTTTCATTATAAT+TGG | - | chr8.3:39280709-39280728 | None:intergenic | 10.0% |
| !!! | CTGATTATTTAAATTTTAAA+AGG | + | chr8.3:39280942-39280961 | MS.gene038660:intron | 10.0% |
| !! | ACTCTTATATATATGAATAA+TGG | + | chr8.3:39278540-39278559 | MS.gene038660:intron | 15.0% |
| !! | ATAAAATAGATAAAATGACA+TGG | - | chr8.3:39277935-39277954 | None:intergenic | 15.0% |
| !!! | ATTTGTTTATATTTGAGATT+GGG | + | chr8.3:39279220-39279239 | MS.gene038660:intron | 15.0% |
| !!! | ATTTTATTTTGTGTGTAAAT+TGG | + | chr8.3:39277806-39277825 | MS.gene038660:intron | 15.0% |
| !!! | TATAACAGATATTGATATTT+TGG | + | chr8.3:39280743-39280762 | MS.gene038660:intron | 15.0% |
| !! | AAGAAAATAAGAAACAAGTT+TGG | - | chr8.3:39278176-39278195 | None:intergenic | 20.0% |
| !! | AATAAAATGTTAGAAAGGAA+AGG | - | chr8.3:39280475-39280494 | None:intergenic | 20.0% |
| !! | AATAATAAGTATGCAATTCT+AGG | - | chr8.3:39280394-39280413 | None:intergenic | 20.0% |
| !! | AATCACAAAATCTTTGATAA+TGG | - | chr8.3:39280865-39280884 | None:intergenic | 20.0% |
| !! | ACAAAAATTGGATACTAATA+TGG | - | chr8.3:39280180-39280199 | None:intergenic | 20.0% |
| !! | AGAATTGCATACTTATTATT+TGG | + | chr8.3:39280394-39280413 | MS.gene038660:intron | 20.0% |
| !! | ATAAATGATAAAACGTATGT+AGG | - | chr8.3:39279562-39279581 | None:intergenic | 20.0% |
| !! | ATGGAGATTATAAAATATGT+AGG | - | chr8.3:39280161-39280180 | None:intergenic | 20.0% |
| !! | GAATTGCATACTTATTATTT+GGG | + | chr8.3:39280395-39280414 | MS.gene038660:intron | 20.0% |
| !! | GATAAGTATTAAGTAAAAAG+TGG | - | chr8.3:39278000-39278019 | None:intergenic | 20.0% |
| !! | TAAATGATAAAACGTATGTA+GGG | - | chr8.3:39279561-39279580 | None:intergenic | 20.0% |
| !! | TATTATAAAATATGATTCGC+TGG | - | chr8.3:39280631-39280650 | None:intergenic | 20.0% |
| !! | TGTTATATGATCATATATCA+TGG | - | chr8.3:39279936-39279955 | None:intergenic | 20.0% |
| !!! | ACTTATTACAGTCTTTTTAT+AGG | + | chr8.3:39279438-39279457 | MS.gene038660:intron | 20.0% |
| !!! | ATACTTATCATTTTTCTTTC+AGG | + | chr8.3:39278011-39278030 | MS.gene038660:intron | 20.0% |
| !!! | CAAAGATTTTGTGATTTTAA+AGG | + | chr8.3:39280869-39280888 | MS.gene038660:CDS | 20.0% |
| !!! | CTATATTCTTATTTCAGTTT+TGG | + | chr8.3:39279089-39279108 | MS.gene038660:intron | 20.0% |
| !!! | GATTTGTTTATATTTGAGAT+TGG | + | chr8.3:39279219-39279238 | MS.gene038660:intron | 20.0% |
| !!! | TACTTATCATTTTTCTTTCA+GGG | + | chr8.3:39278012-39278031 | MS.gene038660:intron | 20.0% |
| !!! | TTATTTTCGTATAATCTGTA+TGG | + | chr8.3:39278228-39278247 | MS.gene038660:intron | 20.0% |
| !!! | TTTATTGCCTTTTAAATCTA+TGG | + | chr8.3:39280489-39280508 | MS.gene038660:intron | 20.0% |
| !!! | TTTGTTTATATTTGAGATTG+GGG | + | chr8.3:39279221-39279240 | MS.gene038660:intron | 20.0% |
| ! | AAAATAAGAAACAAGTTTGG+TGG | - | chr8.3:39278173-39278192 | None:intergenic | 25.0% |
| ! | AAAATTTCTTGAAGCTTCTA+TGG | + | chr8.3:39278634-39278653 | MS.gene038660:CDS | 25.0% |
| ! | AAATAAGAAACAAGTTTGGT+GGG | - | chr8.3:39278172-39278191 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | chr8.3:39281217-39281236 | None:intergenic | 25.0% |
| ! | AAGGCAATAAAATGTTAGAA+AGG | - | chr8.3:39280480-39280499 | None:intergenic | 25.0% |
| ! | AAGTATTAAGTAAAAAGTGG+AGG | - | chr8.3:39277997-39278016 | None:intergenic | 25.0% |
| ! | AGAAAAAGAGAATGGAATAA+AGG | - | chr8.3:39277673-39277692 | None:intergenic | 25.0% |
| ! | AGAAGATATAAAAACTCCAA+TGG | - | chr8.3:39280528-39280547 | None:intergenic | 25.0% |
| ! | AGATGTAGTACTATATCATT+TGG | + | chr8.3:39278817-39278836 | MS.gene038660:intron | 25.0% |
| ! | AGTTGATCTAACCTTTAATT+TGG | - | chr8.3:39278844-39278863 | None:intergenic | 25.0% |
| ! | ATCCATCTTTCTTAAATCAA+AGG | + | chr8.3:39280201-39280220 | MS.gene038660:intron | 25.0% |
| ! | CAAGTGAAAATGAAACTAAA+AGG | - | chr8.3:39280792-39280811 | None:intergenic | 25.0% |
| ! | CAATGCTGAATAATAAATAC+AGG | + | chr8.3:39279168-39279187 | MS.gene038660:intron | 25.0% |
| ! | GAAAAAGAGAATGGAATAAA+GGG | - | chr8.3:39277672-39277691 | None:intergenic | 25.0% |
| ! | GAAAGTGAAAATAGAACATA+TGG | + | chr8.3:39279701-39279720 | MS.gene038660:intron | 25.0% |
| ! | GTTCTATCATAAACCAAATT+TGG | + | chr8.3:39281177-39281196 | MS.gene038660:intron | 25.0% |
| ! | TAACAGTCATTCTATTATGA+GGG | + | chr8.3:39278412-39278431 | MS.gene038660:intron | 25.0% |
| ! | TATCATTTGGACCAAATTAA+AGG | + | chr8.3:39278830-39278849 | MS.gene038660:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | - | chr8.3:39281173-39281192 | None:intergenic | 25.0% |
| ! | TTAACAGTCATTCTATTATG+AGG | + | chr8.3:39278411-39278430 | MS.gene038660:intron | 25.0% |
| ! | TTGTAGCATAGATCAAAAAA+AGG | + | chr8.3:39278088-39278107 | MS.gene038660:CDS | 25.0% |
| ! | TTTGATCTATGCTACAATAT+GGG | - | chr8.3:39278085-39278104 | None:intergenic | 25.0% |
| !! | AACCTTTGATTTAAGAAAGA+TGG | - | chr8.3:39280206-39280225 | None:intergenic | 25.0% |
| !! | CATTCATATATTTGATTTCG+AGG | + | chr8.3:39279784-39279803 | MS.gene038660:intron | 25.0% |
| !! | GTAGGAATCAAAATTTTTAC+TGG | - | chr8.3:39279655-39279674 | None:intergenic | 25.0% |
| !! | TAAGTTGAAACTGAATCTAA+AGG | + | chr8.3:39278700-39278719 | MS.gene038660:CDS | 25.0% |
| !! | TGAAACCATAATAGTTCTAT+CGG | - | chr8.3:39281546-39281565 | None:intergenic | 25.0% |
| !! | TGAAGAATTTGATAATCTCA+AGG | + | chr8.3:39278453-39278472 | MS.gene038660:CDS | 25.0% |
| !! | TTTTGATCTATGCTACAATA+TGG | - | chr8.3:39278086-39278105 | None:intergenic | 25.0% |
| !!! | ATCAGTTCTATTTGTTATAC+TGG | + | chr8.3:39278896-39278915 | MS.gene038660:intron | 25.0% |
| !!! | CTTTTAGTTTCATTTTCACT+TGG | + | chr8.3:39280790-39280809 | MS.gene038660:CDS | 25.0% |
| !!! | GCATTTTATTTGACATGAAA+TGG | - | chr8.3:39279317-39279336 | None:intergenic | 25.0% |
| !!! | GTTTTTTAACACGATTTTGT+AGG | + | chr8.3:39280897-39280916 | MS.gene038660:intron | 25.0% |
| !!! | GTTTTTTTTCCATCATCAAA+TGG | - | chr8.3:39280609-39280628 | None:intergenic | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | chr8.3:39281359-39281378 | None:intergenic | 25.0% |
| !!! | TCAGTTCTATTTGTTATACT+GGG | + | chr8.3:39278897-39278916 | MS.gene038660:intron | 25.0% |
| !!! | TGAAAGTACATTTTTGCTTT+AGG | + | chr8.3:39280243-39280262 | MS.gene038660:intron | 25.0% |
| !!! | TGACTTGTGTTGATTTATAA+TGG | + | chr8.3:39279584-39279603 | MS.gene038660:intron | 25.0% |
| AAAATAGGCTTAGATGGTTT+GGG | - | chr8.3:39281344-39281363 | None:intergenic | 30.0% | |
| AAAATGAAACTAAAAGGCTC+GGG | - | chr8.3:39280786-39280805 | None:intergenic | 30.0% | |
| ACTATACTGTCAATTTCAAG+TGG | + | chr8.3:39281009-39281028 | MS.gene038660:CDS | 30.0% | |
| ACTGCTTCCATAGATTTAAA+AGG | - | chr8.3:39280499-39280518 | None:intergenic | 30.0% | |
| ACTTCTGCCAAATATATGAT+TGG | + | chr8.3:39279673-39279692 | MS.gene038660:intron | 30.0% | |
| AGTAGAATGTTGACATCAAA+TGG | - | chr8.3:39279626-39279645 | None:intergenic | 30.0% | |
| ATAGAGCTAGATATACAATG+AGG | - | chr8.3:39280830-39280849 | None:intergenic | 30.0% | |
| ATCATATATTTGGCAGAAGT+AGG | - | chr8.3:39279673-39279692 | None:intergenic | 30.0% | |
| ATCATCAAATGGTAATCCAT+TGG | - | chr8.3:39280598-39280617 | None:intergenic | 30.0% | |
| ATTTACTAGAATTCACCTTC+AGG | + | chr8.3:39279343-39279362 | MS.gene038660:intron | 30.0% | |
| CAAATCCAGTTATATCATCA+AGG | - | chr8.3:39280329-39280348 | None:intergenic | 30.0% | |
| CAAGTAGTGACAAGAAATAT+AGG | + | chr8.3:39279287-39279306 | MS.gene038660:intron | 30.0% | |
| GAAAATGAAACTAAAAGGCT+CGG | - | chr8.3:39280787-39280806 | None:intergenic | 30.0% | |
| GAAACAGAAGAAAAAGAGAA+TGG | - | chr8.3:39277681-39277700 | None:intergenic | 30.0% | |
| GAAAGATGGATGACAAAAAT+TGG | - | chr8.3:39280192-39280211 | None:intergenic | 30.0% | |
| GATATCTGGACTAAAATTTG+TGG | + | chr8.3:39278370-39278389 | MS.gene038660:intron | 30.0% | |
| GGAGTGGAATTAAAAGTTAA+AGG | - | chr8.3:39280284-39280303 | None:intergenic | 30.0% | |
| GTCATATGACTGATATTAGT+AGG | - | chr8.3:39279252-39279271 | None:intergenic | 30.0% | |
| TAGAGCTAGATATACAATGA+GGG | - | chr8.3:39280829-39280848 | None:intergenic | 30.0% | |
| TATGACTTAAGCGTCTATTT+GGG | + | chr8.3:39279831-39279850 | MS.gene038660:intron | 30.0% | |
| TCTTTAAATAGTCAACAGAC+AGG | - | chr8.3:39279474-39279493 | None:intergenic | 30.0% | |
| TTATCGAAAGAGAGACTTAA+TGG | - | chr8.3:39278199-39278218 | None:intergenic | 30.0% | |
| TTGTTGAATTACTGTTGTGT+AGG | + | chr8.3:39278599-39278618 | MS.gene038660:intron | 30.0% | |
| ! | AGAATTTGATAATCTCAAGG+AGG | + | chr8.3:39278456-39278475 | MS.gene038660:CDS | 30.0% |
| ! | ATACTGTTCAACACAACTTT+TGG | + | chr8.3:39278348-39278367 | MS.gene038660:intron | 30.0% |
| ! | ATCGTTTATTTGAGTCTTGT+TGG | + | chr8.3:39277834-39277853 | MS.gene038660:intron | 30.0% |
| ! | ATTGTGTCACTGGTAATTAA+AGG | + | chr8.3:39278789-39278808 | MS.gene038660:intron | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | chr8.3:39281212-39281231 | MS.gene038660:intron | 30.0% |
| ! | GTTTCTCTAATAGTTTTCCT+AGG | + | chr8.3:39281234-39281253 | MS.gene038660:intron | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | chr8.3:39281363-39281382 | MS.gene038660:intron | 30.0% |
| ! | TCTGAGACCAATCATATATT+TGG | - | chr8.3:39279683-39279702 | None:intergenic | 30.0% |
| ! | TGACAGTAGTTGCATTTTTA+AGG | + | chr8.3:39280448-39280467 | MS.gene038660:intron | 30.0% |
| ! | TTCTTCCTTGATGATATAAC+TGG | + | chr8.3:39280321-39280340 | MS.gene038660:CDS | 30.0% |
| !! | AATGGATTACCATTTGATGA+TGG | + | chr8.3:39280597-39280616 | MS.gene038660:intron | 30.0% |
| !! | ATTTTGTTGCTTGCGTAATT+TGG | + | chr8.3:39279987-39280006 | MS.gene038660:intron | 30.0% |
| !! | TTTCATTTTCACTTGGTTTG+CGG | + | chr8.3:39280797-39280816 | MS.gene038660:CDS | 30.0% |
| !!! | GAAAAGTCTTCTGTTTTTTG+TGG | + | chr8.3:39278754-39278773 | MS.gene038660:intron | 30.0% |
| AAAAAGGAGAAGAAATCCGT+TGG | + | chr8.3:39278104-39278123 | MS.gene038660:CDS | 35.0% | |
| AACTGAAATGGTGTATGACT+CGG | + | chr8.3:39281653-39281672 | MS.gene038660:CDS | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | - | chr8.3:39281289-39281308 | None:intergenic | 35.0% | |
| AAGCACTTATGAGACTGTTT+GGG | - | chr8.3:39278318-39278337 | None:intergenic | 35.0% | |
| AATGGAATAAAGGGAGTTTG+GGG | - | chr8.3:39277663-39277682 | None:intergenic | 35.0% | |
| ACTGAAAATACCTCCTTCTT+TGG | + | chr8.3:39280985-39281004 | MS.gene038660:CDS | 35.0% | |
| AGAAGAATCTAACAGATCAC+AGG | - | chr8.3:39280305-39280324 | None:intergenic | 35.0% | |
| AGAATGGAATAAAGGGAGTT+TGG | - | chr8.3:39277665-39277684 | None:intergenic | 35.0% | |
| AGAGCTAGATATACAATGAG+GGG | - | chr8.3:39280828-39280847 | None:intergenic | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr8.3:39281205-39281224 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | chr8.3:39281370-39281389 | None:intergenic | 35.0% | |
| AGCATGTAGAATATGACATC+AGG | - | chr8.3:39280138-39280157 | None:intergenic | 35.0% | |
| AGTCAAGTTAAAAGAGGTAG+AGG | - | chr8.3:39281264-39281283 | None:intergenic | 35.0% | |
| ATGAAAAAAATATCCCCTGC+AGG | + | chr8.3:39280550-39280569 | MS.gene038660:intron | 35.0% | |
| ATGTAGAATATGACATCAGG+TGG | - | chr8.3:39280135-39280154 | None:intergenic | 35.0% | |
| ATTAACATTTGAACCAGCTG+TGG | + | chr8.3:39281630-39281649 | MS.gene038660:intron | 35.0% | |
| ATTAGAGAGCAAAATGCCAA+TGG | + | chr8.3:39280579-39280598 | MS.gene038660:intron | 35.0% | |
| CAGTAAATTATGCCAGAAAG+AGG | - | chr8.3:39278973-39278992 | None:intergenic | 35.0% | |
| CCTAATTTAACCAAGGTCTT+GGG | - | chr8.3:39277906-39277925 | None:intergenic | 35.0% | |
| CTATGACTTAAGCGTCTATT+TGG | + | chr8.3:39279830-39279849 | MS.gene038660:intron | 35.0% | |
| CTGAAAATACCTCCTTCTTT+GGG | + | chr8.3:39280986-39281005 | MS.gene038660:CDS | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr8.3:39281345-39281364 | None:intergenic | 35.0% | |
| GAATGGAATAAAGGGAGTTT+GGG | - | chr8.3:39277664-39277683 | None:intergenic | 35.0% | |
| GACATCAAATGGTGAATCAA+AGG | - | chr8.3:39279615-39279634 | None:intergenic | 35.0% | |
| GGCATAATTTACTGAACTCA+TGG | + | chr8.3:39278979-39278998 | MS.gene038660:intron | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | - | chr8.3:39281292-39281311 | None:intergenic | 35.0% | |
| GTAGTGACAAGAAATATAGG+AGG | + | chr8.3:39279290-39279309 | MS.gene038660:intron | 35.0% | |
| GTCATTCTATTATGAGGGAA+AGG | + | chr8.3:39278417-39278436 | MS.gene038660:intron | 35.0% | |
| GTTCTCTCCTAATTTAACCA+AGG | - | chr8.3:39277913-39277932 | None:intergenic | 35.0% | |
| GTTGTGTTGAACAGTATCAA+CGG | - | chr8.3:39278345-39278364 | None:intergenic | 35.0% | |
| TAAAACGTATGTAGGGAAAC+AGG | - | chr8.3:39279554-39279573 | None:intergenic | 35.0% | |
| TAAGCACTTATGAGACTGTT+TGG | - | chr8.3:39278319-39278338 | None:intergenic | 35.0% | |
| TACTCTTTGTCGCTCAAAAT+TGG | - | chr8.3:39278677-39278696 | None:intergenic | 35.0% | |
| TCCTAATTTAACCAAGGTCT+TGG | - | chr8.3:39277907-39277926 | None:intergenic | 35.0% | |
| TGAAAAAAATATCCCCTGCA+GGG | + | chr8.3:39280551-39280570 | MS.gene038660:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | chr8.3:39281350-39281369 | None:intergenic | 35.0% | |
| TGTCAGATGCTATGACATTA+TGG | - | chr8.3:39280433-39280452 | None:intergenic | 35.0% | |
| TGTTAAAGTGAAGGCTACTT+TGG | - | chr8.3:39277619-39277638 | None:intergenic | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | + | chr8.3:39281293-39281312 | MS.gene038660:intron | 35.0% | |
| ! | AGAGCATTTGACTTTGTTGT+TGG | - | chr8.3:39281040-39281059 | None:intergenic | 35.0% |
| ! | AGTTTGGTGGGATATATACT+TGG | - | chr8.3:39278160-39278179 | None:intergenic | 35.0% |
| ! | ATACTGTCAATTTCAAGTGG+TGG | + | chr8.3:39281012-39281031 | MS.gene038660:CDS | 35.0% |
| ! | ATTTTTCTTTCAGGGAATGC+TGG | + | chr8.3:39278020-39278039 | MS.gene038660:intron | 35.0% |
| ! | CAACACAACTTTTGGATATC+TGG | + | chr8.3:39278356-39278375 | MS.gene038660:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATT+TGG | - | chr8.3:39281193-39281212 | None:intergenic | 35.0% |
| ! | CACTTACCTTTTTACTTCGA+AGG | - | chr8.3:39279057-39279076 | None:intergenic | 35.0% |
| ! | GGATGAGTTTTGCAAATCTA+TGG | - | chr8.3:39280688-39280707 | None:intergenic | 35.0% |
| ! | GTTTTGTATCTTCCTCTTTC+TGG | + | chr8.3:39278958-39278977 | MS.gene038660:intron | 35.0% |
| ! | TCTATTTGGGAAGGTGATTT+TGG | + | chr8.3:39279844-39279863 | MS.gene038660:intron | 35.0% |
| ! | TGAGATCACTTATTTGCTAG+AGG | + | chr8.3:39280347-39280366 | MS.gene038660:CDS | 35.0% |
| !! | AGGATTTTACCCTGTCATTT+GGG | + | chr8.3:39279363-39279382 | MS.gene038660:intron | 35.0% |
| !! | ATCTAGCTCTATCACTAACA+AGG | + | chr8.3:39280838-39280857 | MS.gene038660:CDS | 35.0% |
| !! | TCTAGCTCTATCACTAACAA+GGG | + | chr8.3:39280839-39280858 | MS.gene038660:CDS | 35.0% |
| AATCTAACAGATCACAGGAG+TGG | - | chr8.3:39280300-39280319 | None:intergenic | 40.0% | |
| ACTGAAATGGTGTATGACTC+GGG | + | chr8.3:39281654-39281673 | MS.gene038660:CDS | 40.0% | |
| ACTTAAGCGTCTATTTGGGA+AGG | + | chr8.3:39279835-39279854 | MS.gene038660:intron | 40.0% | |
| AGACTAGACAGGATAGGATT+AGG | - | chr8.3:39281422-39281441 | None:intergenic | 40.0% | |
| ATCTCAAGGAGGAACTTATG+TGG | + | chr8.3:39278467-39278486 | MS.gene038660:CDS | 40.0% | |
| ATGACAGGGTAAAATCCTGA+AGG | - | chr8.3:39279361-39279380 | None:intergenic | 40.0% | |
| CAGTGTTGTCATGCTAAGTA+TGG | + | chr8.3:39278498-39278517 | MS.gene038660:intron | 40.0% | |
| CCCAAGACCTTGGTTAAATT+AGG | + | chr8.3:39277903-39277922 | MS.gene038660:intron | 40.0% | |
| GAGGAGAGTCAAGTTAAAAG+AGG | - | chr8.3:39281270-39281289 | None:intergenic | 40.0% | |
| GATCTATGCTACAATATGGG+AGG | - | chr8.3:39278082-39278101 | None:intergenic | 40.0% | |
| GCTGTCCGATAGAACTATTA+TGG | + | chr8.3:39281538-39281557 | MS.gene038660:intron | 40.0% | |
| GCTTCTATGGCTTATGTATC+TGG | + | chr8.3:39278647-39278666 | MS.gene038660:CDS | 40.0% | |
| GGTTGCATTAGGATTGTAAG+TGG | + | chr8.3:39279522-39279541 | MS.gene038660:intron | 40.0% | |
| TCCTTTCTATCCCTTCCTTA+GGG | - | chr8.3:39280063-39280082 | None:intergenic | 40.0% | |
| TCTCAAGGAGGAACTTATGT+GGG | + | chr8.3:39278468-39278487 | MS.gene038660:CDS | 40.0% | |
| TCTCTAATGTTTACCCTGCA+GGG | - | chr8.3:39280567-39280586 | None:intergenic | 40.0% | |
| TGAAGTCATCATTGTGTCAC+TGG | + | chr8.3:39278779-39278798 | MS.gene038660:intron | 40.0% | |
| TGACAGTATAGTCCCAAAGA+AGG | - | chr8.3:39281001-39281020 | None:intergenic | 40.0% | |
| TGGAAGCAGTTTATCACCAT+TGG | + | chr8.3:39280509-39280528 | MS.gene038660:intron | 40.0% | |
| TTCCTTTCTATCCCTTCCTT+AGG | - | chr8.3:39280064-39280083 | None:intergenic | 40.0% | |
| TTCTTGCTCAAGTTCACCAA+CGG | - | chr8.3:39278123-39278142 | None:intergenic | 40.0% | |
| TTTAACCAAGGTCTTGGGTT+CGG | - | chr8.3:39277901-39277920 | None:intergenic | 40.0% | |
| ! | AAATTGTTGTTGAGGGTCCA+AGG | + | chr8.3:39279026-39279045 | MS.gene038660:CDS | 40.0% |
| ! | AGGGAGTGAAATTGTTGTTG+AGG | + | chr8.3:39279018-39279037 | MS.gene038660:CDS | 40.0% |
| ! | ATTTGGGAAGGTGATTTTGG+AGG | + | chr8.3:39279847-39279866 | MS.gene038660:intron | 40.0% |
| ! | CAGGATTTTACCCTGTCATT+TGG | + | chr8.3:39279362-39279381 | MS.gene038660:intron | 40.0% |
| ! | GGGAGTGAAATTGTTGTTGA+GGG | + | chr8.3:39279019-39279038 | MS.gene038660:CDS | 40.0% |
| ! | GTATTTTCAGTTCCGCAGTT+TGG | - | chr8.3:39280976-39280995 | None:intergenic | 40.0% |
| ! | TTTGGGAAGGTGATTTTGGA+GGG | + | chr8.3:39279848-39279867 | MS.gene038660:intron | 40.0% |
| !! | AAGGTGATTTTGGAGGGTTT+TGG | + | chr8.3:39279854-39279873 | MS.gene038660:intron | 40.0% |
| !! | ATGGTTGTTTTCCAGAGAGA+AGG | + | chr8.3:39278998-39279017 | MS.gene038660:intron | 40.0% |
| !! | TGGTTGTTTTCCAGAGAGAA+GGG | + | chr8.3:39278999-39279018 | MS.gene038660:intron | 40.0% |
| !!! | TGATTTTGGAGGGTTTTGGA+GGG | + | chr8.3:39279858-39279877 | MS.gene038660:intron | 40.0% |
| AAAGAGGTAGAGGAAGACCT+AGG | - | chr8.3:39281254-39281273 | None:intergenic | 45.0% | |
| AAAGCCACTGCAGATCAACA+AGG | + | chr8.3:39277762-39277781 | MS.gene038660:CDS | 45.0% | |
| AACCAGCTGTGGAACTGAAA+TGG | + | chr8.3:39281641-39281660 | MS.gene038660:intron | 45.0% | |
| AAGGAGGAACTTATGTGGGA+AGG | + | chr8.3:39278472-39278491 | MS.gene038660:CDS | 45.0% | |
| ACACCATTAGAGAGAGAGTG+GGG | - | chr8.3:39281395-39281414 | None:intergenic | 45.0% | |
| ACCCTAAGGAAGGGATAGAA+AGG | + | chr8.3:39280059-39280078 | MS.gene038660:intron | 45.0% | |
| ACTCGTCAATCCCAAATGAC+AGG | - | chr8.3:39279376-39279395 | None:intergenic | 45.0% | |
| CAATCCTAATGCAACCACAG+TGG | - | chr8.3:39279518-39279537 | None:intergenic | 45.0% | |
| CAATTTCACTCCCTTCTCTC+TGG | - | chr8.3:39279012-39279031 | None:intergenic | 45.0% | |
| CAGTATAGTCCCAAAGAAGG+AGG | - | chr8.3:39280998-39281017 | None:intergenic | 45.0% | |
| CCCAAACATACCCTAAGGAA+GGG | + | chr8.3:39280050-39280069 | MS.gene038660:intron | 45.0% | |
| CCCTTCCTTAGGGTATGTTT+GGG | - | chr8.3:39280053-39280072 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+TGG | - | chr8.3:39281464-39281483 | None:intergenic | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | + | chr8.3:39281467-39281486 | MS.gene038660:intron | 45.0% | |
| CTCGTCAATCCCAAATGACA+GGG | - | chr8.3:39279375-39279394 | None:intergenic | 45.0% | |
| CTCTAATGTTTACCCTGCAG+GGG | - | chr8.3:39280566-39280585 | None:intergenic | 45.0% | |
| CTCTCTAATGTTTACCCTGC+AGG | - | chr8.3:39280568-39280587 | None:intergenic | 45.0% | |
| GACACCATTAGAGAGAGAGT+GGG | - | chr8.3:39281396-39281415 | None:intergenic | 45.0% | |
| GATACCTTGTTGATCTGCAG+TGG | - | chr8.3:39277769-39277788 | None:intergenic | 45.0% | |
| GATGAGTGGTAAGACTAGAC+AGG | - | chr8.3:39281433-39281452 | None:intergenic | 45.0% | |
| GCGAAAGTAGGAGTAATCTG+CGG | - | chr8.3:39277740-39277759 | None:intergenic | 45.0% | |
| GTGCAGCCTTCGAAGTAAAA+AGG | + | chr8.3:39279048-39279067 | MS.gene038660:CDS | 45.0% | |
| GTGGTAAGACTAGACAGGAT+AGG | - | chr8.3:39281428-39281447 | None:intergenic | 45.0% | |
| GTTGGACGACTCAAAATGAG+TGG | + | chr8.3:39277852-39277871 | MS.gene038660:intron | 45.0% | |
| TCCCAAACATACCCTAAGGA+AGG | + | chr8.3:39280049-39280068 | MS.gene038660:intron | 45.0% | |
| TCCCTTCCTTAGGGTATGTT+TGG | - | chr8.3:39280054-39280073 | None:intergenic | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | + | chr8.3:39281508-39281527 | MS.gene038660:intron | 45.0% | |
| TCCTTAGGGTATGTTTGGGA+GGG | - | chr8.3:39280049-39280068 | None:intergenic | 45.0% | |
| TCTTCTTACCACGGCATCTA+CGG | + | chr8.3:39281302-39281321 | MS.gene038660:intron | 45.0% | |
| TGACACCATTAGAGAGAGAG+TGG | - | chr8.3:39281397-39281416 | None:intergenic | 45.0% | |
| TGTTGATCTGCAGTGGCTTT+AGG | - | chr8.3:39277762-39277781 | None:intergenic | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | - | chr8.3:39281504-39281523 | None:intergenic | 45.0% | |
| TTCCTTAGGGTATGTTTGGG+AGG | - | chr8.3:39280050-39280069 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr8.3:39281124-39281143 | MS.gene038660:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr8.3:39281123-39281142 | MS.gene038660:intron | 45.0% |
| ! | GGGAATGCTGGAGATTTTGA+CGG | + | chr8.3:39278032-39278051 | MS.gene038660:intron | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | - | chr8.3:39281503-39281522 | None:intergenic | 45.0% |
| !! | GTGATTTTGGAGGGTTTTGG+AGG | + | chr8.3:39279857-39279876 | MS.gene038660:intron | 45.0% |
| !!! | TGATTATTTAAATTTTAAAA+GGG | + | chr8.3:39280943-39280962 | MS.gene038660:intron | 5.0% |
| AGTAAGCGTAGTGGTTGCGT+TGG | - | chr8.3:39281455-39281474 | None:intergenic | 50.0% | |
| AGTTCTATCGGACAGCAGTC+AGG | - | chr8.3:39281534-39281553 | None:intergenic | 50.0% | |
| CACCATTAGAGAGAGAGTGG+GGG | - | chr8.3:39281394-39281413 | None:intergenic | 50.0% | |
| CACCATTTCAGTTCCACAGC+TGG | - | chr8.3:39281646-39281665 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr8.3:39281125-39281144 | None:intergenic | 50.0% | |
| CCTTAGGGTATGTTTGGGAG+GGG | - | chr8.3:39280048-39280067 | None:intergenic | 50.0% | |
| CTAATGCAACCACAGTGGCT+GGG | - | chr8.3:39279513-39279532 | None:intergenic | 50.0% | |
| CTTAGGGTATGTTTGGGAGG+GGG | - | chr8.3:39280047-39280066 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr8.3:39281128-39281147 | MS.gene038660:intron | 50.0% | |
| CTTCTTACCACGGCATCTAC+GGG | + | chr8.3:39281303-39281322 | MS.gene038660:intron | 50.0% | |
| GCCGGCAATGTTGTATGGTA+CGG | - | chr8.3:39281512-39281531 | None:intergenic | 50.0% | |
| TACCCCCACTCTCTCTCTAA+TGG | + | chr8.3:39281389-39281408 | MS.gene038660:intron | 50.0% | |
| TAGTGGTTGCGTTGGATGAG+TGG | - | chr8.3:39281447-39281466 | None:intergenic | 50.0% | |
| TCAGTTCCGCAGTTTGGACA+GGG | - | chr8.3:39280970-39280989 | None:intergenic | 50.0% | |
| TTACTTCGAAGGCTGCACCT+TGG | - | chr8.3:39279046-39279065 | None:intergenic | 50.0% | |
| TTAGGGTATGTTTGGGAGGG+GGG | - | chr8.3:39280046-39280065 | None:intergenic | 50.0% | |
| TTCAGTTCCGCAGTTTGGAC+AGG | - | chr8.3:39280971-39280990 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr8.3:39281122-39281141 | MS.gene038660:intron | 50.0% |
| ! | TATGTTTGGGAGGGGGGTTT+TGG | - | chr8.3:39280040-39280059 | None:intergenic | 50.0% |
| !! | AGGAGGGGGTGTTAAAGTGA+AGG | - | chr8.3:39277628-39277647 | None:intergenic | 50.0% |
| !! | CAGTGGCTTTAGGCGAAAGT+AGG | - | chr8.3:39277752-39277771 | None:intergenic | 50.0% |
| AAGGGTCCCTGTCCAAACTG+CGG | + | chr8.3:39280961-39280980 | MS.gene038660:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr8.3:39281136-39281155 | MS.gene038660:intron | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr8.3:39281137-39281156 | None:intergenic | 55.0% | |
| CAAGTCCGAACCCAAGACCT+TGG | + | chr8.3:39277893-39277912 | MS.gene038660:intron | 55.0% | |
| CCAGCCACTGTGGTTGCATT+AGG | + | chr8.3:39279511-39279530 | MS.gene038660:CDS | 55.0% | |
| CCCCTCCCAAACATACCCTA+AGG | + | chr8.3:39280045-39280064 | MS.gene038660:intron | 55.0% | |
| CCTAATGCAACCACAGTGGC+TGG | - | chr8.3:39279514-39279533 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr8.3:39281130-39281149 | None:intergenic | 55.0% | |
| GTAGGAGTAATCTGCGGCGA+AGG | - | chr8.3:39277734-39277753 | None:intergenic | 55.0% | |
| GTCAGGCCGGCAATGTTGTA+TGG | - | chr8.3:39281517-39281536 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr8.3:39281136-39281155 | None:intergenic | 55.0% | |
| ! | GGAGTTTGGGGTGCAGAACA+TGG | - | chr8.3:39277651-39277670 | None:intergenic | 55.0% |
| ! | GTTTGGGGTGCAGAACATGG+AGG | - | chr8.3:39277648-39277667 | None:intergenic | 55.0% |
| !! | GTATGGTACGGAGTGTTGGG+CGG | - | chr8.3:39281500-39281519 | None:intergenic | 55.0% |
| !!! | TTTGGGAGGGGGGTTTTGGA+GGG | - | chr8.3:39280036-39280055 | None:intergenic | 55.0% |
| CTATCGGACAGCAGTCAGGC+CGG | - | chr8.3:39281530-39281549 | None:intergenic | 60.0% | |
| GAGAAGACCCGTAGATGCCG+TGG | - | chr8.3:39281313-39281332 | None:intergenic | 60.0% | |
| GGGGTGCAGAACATGGAGGA+GGG | - | chr8.3:39277644-39277663 | None:intergenic | 60.0% | |
| GGGTGCAGAACATGGAGGAG+GGG | - | chr8.3:39277643-39277662 | None:intergenic | 60.0% | |
| GGTGCAGAACATGGAGGAGG+GGG | - | chr8.3:39277642-39277661 | None:intergenic | 60.0% | |
| TGGGGTGCAGAACATGGAGG+AGG | - | chr8.3:39277645-39277664 | None:intergenic | 60.0% | |
| ! | ACGTGGCGGGAGTTGAAGTG+AGG | - | chr8.3:39277708-39277727 | None:intergenic | 60.0% |
| ! | ATCTGCGGCGAAGGCATACG+TGG | - | chr8.3:39277725-39277744 | None:intergenic | 60.0% |
| !! | GTTTGGGAGGGGGGTTTTGG+AGG | - | chr8.3:39280037-39280056 | None:intergenic | 60.0% |
| !!! | AGGGGGGTTTTGGAGGGAAG+GGG | - | chr8.3:39280030-39280049 | None:intergenic | 60.0% |
| !!! | GAGGGGGGTTTTGGAGGGAA+GGG | - | chr8.3:39280031-39280050 | None:intergenic | 60.0% |
| CAGTGGCTGGGACGTTCAGC+AGG | - | chr8.3:39279501-39279520 | None:intergenic | 65.0% | |
| GCTGAACGTCCCAGCCACTG+TGG | + | chr8.3:39279501-39279520 | MS.gene038660:CDS | 65.0% | |
| ! | TGCGGCGAAGGCATACGTGG+CGG | - | chr8.3:39277722-39277741 | None:intergenic | 65.0% |
| !!! | GGAGGGGGGTTTTGGAGGGA+AGG | - | chr8.3:39280032-39280051 | None:intergenic | 65.0% |
| !!! | GGGGTTTTGGAGGGAAGGGG+AGG | - | chr8.3:39280027-39280046 | None:intergenic | 65.0% |
| ! | GCGGCGAAGGCATACGTGGC+GGG | - | chr8.3:39277721-39277740 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 39277603 | 39281704 | 39277603 | ID=MS.gene038660 |
| chr8.3 | mRNA | 39277603 | 39281704 | 39277603 | ID=MS.gene038660.t1;Parent=MS.gene038660 |
| chr8.3 | exon | 39277603 | 39277783 | 39277603 | ID=MS.gene038660.t1.exon1;Parent=MS.gene038660.t1 |
| chr8.3 | CDS | 39277603 | 39277783 | 39277603 | ID=cds.MS.gene038660.t1;Parent=MS.gene038660.t1 |
| chr8.3 | exon | 39278033 | 39278160 | 39278033 | ID=MS.gene038660.t1.exon2;Parent=MS.gene038660.t1 |
| chr8.3 | CDS | 39278033 | 39278160 | 39278033 | ID=cds.MS.gene038660.t1;Parent=MS.gene038660.t1 |
| chr8.3 | exon | 39278418 | 39278514 | 39278418 | ID=MS.gene038660.t1.exon3;Parent=MS.gene038660.t1 |
| chr8.3 | CDS | 39278418 | 39278514 | 39278418 | ID=cds.MS.gene038660.t1;Parent=MS.gene038660.t1 |
| chr8.3 | exon | 39278621 | 39278721 | 39278621 | ID=MS.gene038660.t1.exon4;Parent=MS.gene038660.t1 |
| chr8.3 | CDS | 39278621 | 39278721 | 39278621 | ID=cds.MS.gene038660.t1;Parent=MS.gene038660.t1 |
| chr8.3 | exon | 39279013 | 39279069 | 39279013 | ID=MS.gene038660.t1.exon5;Parent=MS.gene038660.t1 |
| chr8.3 | CDS | 39279013 | 39279069 | 39279013 | ID=cds.MS.gene038660.t1;Parent=MS.gene038660.t1 |
| chr8.3 | exon | 39279460 | 39279536 | 39279460 | ID=MS.gene038660.t1.exon6;Parent=MS.gene038660.t1 |
| chr8.3 | CDS | 39279460 | 39279536 | 39279460 | ID=cds.MS.gene038660.t1;Parent=MS.gene038660.t1 |
| chr8.3 | exon | 39280317 | 39280368 | 39280317 | ID=MS.gene038660.t1.exon7;Parent=MS.gene038660.t1 |
| chr8.3 | CDS | 39280317 | 39280368 | 39280317 | ID=cds.MS.gene038660.t1;Parent=MS.gene038660.t1 |
| chr8.3 | exon | 39280780 | 39280890 | 39280780 | ID=MS.gene038660.t1.exon8;Parent=MS.gene038660.t1 |
| chr8.3 | CDS | 39280780 | 39280890 | 39280780 | ID=cds.MS.gene038660.t1;Parent=MS.gene038660.t1 |
| chr8.3 | exon | 39280964 | 39281061 | 39280964 | ID=MS.gene038660.t1.exon9;Parent=MS.gene038660.t1 |
| chr8.3 | CDS | 39280964 | 39281061 | 39280964 | ID=cds.MS.gene038660.t1;Parent=MS.gene038660.t1 |
| chr8.3 | exon | 39281647 | 39281704 | 39281647 | ID=MS.gene038660.t1.exon10;Parent=MS.gene038660.t1 |
| chr8.3 | CDS | 39281647 | 39281704 | 39281647 | ID=cds.MS.gene038660.t1;Parent=MS.gene038660.t1 |
| Gene Sequence |
| Protein sequence |
