Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039007.t1 | RHN74456.1 | 98.3 | 401 | 7 | 0 | 1 | 401 | 91 | 491 | 1.30E-217 | 765.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039007.t1 | Q42962 | 89.8 | 401 | 41 | 0 | 1 | 401 | 1 | 401 | 9.4e-204 | 710.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039007.t1 | G7IT86 | 98.3 | 401 | 7 | 0 | 1 | 401 | 1 | 401 | 9.6e-218 | 765.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene039007 | MS.gene55841 | PPI |
| MS.gene039007 | MS.gene77615 | PPI |
| MS.gene039007 | MS.gene92153 | PPI |
| MS.gene039007 | MS.gene00360 | PPI |
| MS.gene20197 | MS.gene039007 | PPI |
| MS.gene039007 | MS.gene74184 | PPI |
| MS.gene039007 | MS.gene004621 | PPI |
| MS.gene039007 | MS.gene06122 | PPI |
| MS.gene039007 | MS.gene073408 | PPI |
| MS.gene74184 | MS.gene039007 | PPI |
| MS.gene039007 | MS.gene58636 | PPI |
| MS.gene039007 | MS.gene048975 | PPI |
| MS.gene039007 | MS.gene039009 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039007.t1 | MTR_2g066120 | 98.254 | 401 | 7 | 0 | 1 | 401 | 1 | 401 | 0.0 | 782 |
| MS.gene039007.t1 | MTR_2g066130 | 97.756 | 401 | 9 | 0 | 1 | 401 | 1 | 401 | 0.0 | 780 |
| MS.gene039007.t1 | MTR_2g066110 | 86.432 | 398 | 54 | 0 | 4 | 401 | 77 | 474 | 0.0 | 687 |
| MS.gene039007.t1 | MTR_1242s0010 | 98.230 | 226 | 4 | 0 | 176 | 401 | 1 | 226 | 5.71e-154 | 434 |
| MS.gene039007.t1 | MTR_1680s0010 | 48.309 | 207 | 100 | 3 | 15 | 219 | 148 | 349 | 1.45e-52 | 180 |
| MS.gene039007.t1 | MTR_6g018680 | 31.514 | 403 | 257 | 9 | 7 | 401 | 82 | 473 | 9.13e-45 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039007.t1 | AT1G79550 | 88.529 | 401 | 46 | 0 | 1 | 401 | 1 | 401 | 0.0 | 714 |
| MS.gene039007.t1 | AT1G79550 | 88.529 | 401 | 46 | 0 | 1 | 401 | 1 | 401 | 0.0 | 714 |
| MS.gene039007.t1 | AT3G12780 | 85.176 | 398 | 59 | 0 | 4 | 401 | 79 | 476 | 0.0 | 679 |
| MS.gene039007.t1 | AT1G56190 | 84.171 | 398 | 63 | 0 | 4 | 401 | 76 | 473 | 0.0 | 679 |
| MS.gene039007.t1 | AT1G56190 | 84.171 | 398 | 63 | 0 | 4 | 401 | 3 | 400 | 0.0 | 676 |
Find 111 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCAACTTCTTTGCGAATTC+AGG | 0.198840 | 2.4:-27903358 | None:intergenic |
| TACTTGAAGCCGTCTGTTGC+AGG | 0.283263 | 2.4:+27903460 | MS.gene039007:CDS |
| ACTTACCTCAGCTAATTTCT+TGG | 0.298738 | 2.4:-27906376 | None:intergenic |
| ATCAAATACTTGACTGGTTA+TGG | 0.312742 | 2.4:+27902502 | MS.gene039007:CDS |
| AATAGCAGCAAATGGTTTCT+TGG | 0.312833 | 2.4:-27904747 | None:intergenic |
| CCAAGGTTGTCTGAACTTCT+TGG | 0.315943 | 2.4:+27903096 | MS.gene039007:CDS |
| CTGTAGAAGCATGAGCTCTA+TGG | 0.325002 | 2.4:-27903423 | None:intergenic |
| CTTGTCCAATGCTTCATTGA+AGG | 0.339632 | 2.4:-27905603 | None:intergenic |
| CTTTATGTGAATGATGCTTT+TGG | 0.345727 | 2.4:+27903394 | MS.gene039007:CDS |
| GGATGGATGGGATTGGATAT+TGG | 0.353307 | 2.4:+27905563 | MS.gene039007:CDS |
| TACTTAGGTGTTACACCCTT+TGG | 0.355902 | 2.4:-27903054 | None:intergenic |
| ATAGCAGCAAATGGTTTCTT+GGG | 0.363393 | 2.4:-27904746 | None:intergenic |
| GGTTGATCTAAATGTTCCTT+TGG | 0.363594 | 2.4:+27902426 | MS.gene039007:CDS |
| ATAACCCTGAGCCTTGTAAA+AGG | 0.373147 | 2.4:-27904864 | None:intergenic |
| AGAAGCAAAACACCACCTTC+TGG | 0.376836 | 2.4:-27903295 | None:intergenic |
| CCATTTGCTGCTATTGTTGG+TGG | 0.404872 | 2.4:+27904755 | MS.gene039007:CDS |
| CGGAGTTATTGAATCCTTGT+TGG | 0.406022 | 2.4:+27904799 | MS.gene039007:CDS |
| TGCCATTGGGTCCTCTCTTG+TGG | 0.416339 | 2.4:+27904886 | MS.gene039007:CDS |
| AGTCATTCTTTCCAGTCATC+TGG | 0.420691 | 2.4:+27902531 | MS.gene039007:CDS |
| CCACATCAGTTGGAAGCAAA+AGG | 0.424559 | 2.4:-27904970 | None:intergenic |
| GACATTCTCTTGCTTGGTGG+AGG | 0.425395 | 2.4:+27904830 | MS.gene039007:CDS |
| TCCAATCCCATCCATCCATC+AGG | 0.427851 | 2.4:-27905557 | None:intergenic |
| TGGTGAGGAAGTTGAGAAGT+TGG | 0.433027 | 2.4:+27903261 | MS.gene039007:CDS |
| AAAGTTGACATTCTCTTGCT+TGG | 0.435274 | 2.4:+27904824 | MS.gene039007:CDS |
| CTCAGCTAATTTCTTGGCAA+TGG | 0.440035 | 2.4:-27906370 | None:intergenic |
| CAGGAGCTTGACTATCTAGT+TGG | 0.444679 | 2.4:+27904710 | MS.gene039007:intron |
| GTCTGAACTTCTTGGAACTC+AGG | 0.446868 | 2.4:+27903104 | MS.gene039007:CDS |
| GGATTCAATAACTCCGATCT+TGG | 0.447530 | 2.4:-27904792 | None:intergenic |
| GTTGACATTCTCTTGCTTGG+TGG | 0.459365 | 2.4:+27904827 | MS.gene039007:CDS |
| CCCTGCATACCTTCTGCATA+AGG | 0.460902 | 2.4:-27903486 | None:intergenic |
| AAGGCTCAGGGTTATGCCAT+TGG | 0.462386 | 2.4:+27904872 | MS.gene039007:CDS |
| TCATCAAGAGCAAGGACTCC+GGG | 0.473099 | 2.4:-27906534 | None:intergenic |
| CCAGTCAAGTATTTGATAGT+AGG | 0.473742 | 2.4:-27902496 | None:intergenic |
| AAACCATTTGCTGCTATTGT+TGG | 0.476296 | 2.4:+27904752 | MS.gene039007:CDS |
| GAGTTTGACAAGTTTGCAGC+AGG | 0.478556 | 2.4:+27905665 | MS.gene039007:CDS |
| AAGATGAGTCACATCTCAAC+TGG | 0.482513 | 2.4:+27906471 | MS.gene039007:CDS |
| AAGAAGCGTGGGAACATTGA+AGG | 0.484692 | 2.4:+27902369 | MS.gene039007:CDS |
| CCTACTATCAAATACTTGAC+TGG | 0.486327 | 2.4:+27902496 | MS.gene039007:CDS |
| AAGGGAAACTCCTTTCGCCT+TGG | 0.487168 | 2.4:-27904951 | None:intergenic |
| AGGCTCAGGGTTATGCCATT+GGG | 0.487497 | 2.4:+27904873 | MS.gene039007:CDS |
| GCCAGCTTAGAGCTTCTTGA+GGG | 0.493948 | 2.4:+27906501 | MS.gene039007:CDS |
| GTAGCAGCTGTTGAGAAGGT+TGG | 0.494254 | 2.4:+27906438 | MS.gene039007:CDS |
| TCCTGAATTCGCAAAGAAGT+TGG | 0.495468 | 2.4:+27903357 | MS.gene039007:CDS |
| TGCTATTGTTGGTGGCTCAA+AGG | 0.497576 | 2.4:+27904763 | MS.gene039007:CDS |
| TGTAGAAGCATGAGCTCTAT+GGG | 0.498596 | 2.4:-27903422 | None:intergenic |
| ACAAGAGTCAGACCATCATA+TGG | 0.501196 | 2.4:+27905621 | MS.gene039007:CDS |
| ATCATCAAGAGCAAGGACTC+CGG | 0.502112 | 2.4:-27906535 | None:intergenic |
| CATTGGTCCATTCCATATGA+TGG | 0.512304 | 2.4:-27905633 | None:intergenic |
| CCATCAGGGATGCTTGATGC+TGG | 0.514506 | 2.4:-27905542 | None:intergenic |
| CCCCTCAAGAAGCTCTAAGC+TGG | 0.515261 | 2.4:-27906502 | None:intergenic |
| AGCATCCCTGATGGATGGAT+GGG | 0.516731 | 2.4:+27905551 | MS.gene039007:CDS |
| ATCATATGGAATGGACCAAT+GGG | 0.517229 | 2.4:+27905635 | MS.gene039007:CDS |
| AAGCATCCCTGATGGATGGA+TGG | 0.517781 | 2.4:+27905550 | MS.gene039007:CDS |
| TGATCTTGCAACTTCACTTG+TGG | 0.518096 | 2.4:+27904922 | MS.gene039007:CDS |
| AGAGCAAGGACTCCGGGGAG+TGG | 0.520690 | 2.4:-27906528 | None:intergenic |
| AAAGGAGTAACAACCATCAT+TGG | 0.521759 | 2.4:+27906402 | MS.gene039007:CDS |
| CAAAACCTTCAATGAAGCAT+TGG | 0.522167 | 2.4:+27905598 | MS.gene039007:CDS |
| AGCTGAATTGAAAGGAAAGA+GGG | 0.523844 | 2.4:+27902393 | MS.gene039007:CDS |
| CTCTGTAGCAGCTGTTGAGA+AGG | 0.525835 | 2.4:+27906434 | MS.gene039007:CDS |
| CACATCAGTTGGAAGCAAAA+GGG | 0.527551 | 2.4:-27904969 | None:intergenic |
| CCCTGATGGATGGATGGGAT+TGG | 0.534429 | 2.4:+27905556 | MS.gene039007:CDS |
| AGAGGCTTCAAACTGTACTT+AGG | 0.544386 | 2.4:-27903069 | None:intergenic |
| AAGCTGAATTGAAAGGAAAG+AGG | 0.544815 | 2.4:+27902392 | MS.gene039007:CDS |
| TCAAAGGTGTCTTCCAAGAT+CGG | 0.545377 | 2.4:+27904779 | MS.gene039007:CDS |
| AAGATTGCTGATGACTGTAT+TGG | 0.545548 | 2.4:+27903241 | MS.gene039007:CDS |
| CTTGAGGGGAAGCCACTCCC+CGG | 0.547185 | 2.4:+27906516 | MS.gene039007:CDS |
| CCACCAACAATAGCAGCAAA+TGG | 0.547345 | 2.4:-27904755 | None:intergenic |
| CATCATATGGAATGGACCAA+TGG | 0.552475 | 2.4:+27905634 | MS.gene039007:CDS |
| AGAGTCACCACCTCCAATGA+TGG | 0.560258 | 2.4:-27906415 | None:intergenic |
| AAGAAATTAGCTGAGGTAAG+TGG | 0.562795 | 2.4:+27906378 | MS.gene039007:CDS |
| CAGATGTTATACCAGATGAC+TGG | 0.562839 | 2.4:-27902542 | None:intergenic |
| TGCCAGCTTAGAGCTTCTTG+AGG | 0.565118 | 2.4:+27906500 | MS.gene039007:CDS |
| GTTTGAAGCCTCTTGTACCA+AGG | 0.565504 | 2.4:+27903079 | MS.gene039007:CDS |
| TCAGCGATGACCACATCAGT+TGG | 0.565508 | 2.4:-27904980 | None:intergenic |
| TGCAGGGTTCCTTATGCAGA+AGG | 0.565829 | 2.4:+27903477 | MS.gene039007:CDS |
| CATCAAGCATCCCTGATGGA+TGG | 0.570924 | 2.4:+27905546 | MS.gene039007:CDS |
| TTGAAGGAAGCTGAATTGAA+AGG | 0.571440 | 2.4:+27902385 | MS.gene039007:CDS |
| AGAGCTCATGCTTCTACAGA+AGG | 0.574431 | 2.4:+27903427 | MS.gene039007:CDS |
| AGTCAGACCATCATATGGAA+TGG | 0.580523 | 2.4:+27905626 | MS.gene039007:CDS |
| TCAGACAACCTTGGTACAAG+AGG | 0.582460 | 2.4:-27903087 | None:intergenic |
| GGAGTAACAACCATCATTGG+AGG | 0.582673 | 2.4:+27906405 | MS.gene039007:CDS |
| TAATACCTTGTCGTTAGCAT+CGG | 0.584070 | 2.4:-27905014 | None:intergenic |
| CATTGGGTCCTCTCTTGTGG+AGG | 0.584637 | 2.4:+27904889 | MS.gene039007:CDS |
| ACTTGAAGCCGTCTGTTGCA+GGG | 0.584673 | 2.4:+27903461 | MS.gene039007:CDS |
| TGGTTTCTTGGGGTTCAACA+CGG | 0.586474 | 2.4:-27904735 | None:intergenic |
| TTAGCTGAGGTAAGTGGCAA+AGG | 0.596813 | 2.4:+27906384 | MS.gene039007:CDS |
| CTTGTCTTCCTCCACAAGAG+AGG | 0.611431 | 2.4:-27904897 | None:intergenic |
| AGTCACATCTCAACTGGTGG+AGG | 0.611878 | 2.4:+27906477 | MS.gene039007:CDS |
| ATGAGTCACATCTCAACTGG+TGG | 0.612720 | 2.4:+27906474 | MS.gene039007:CDS |
| TAGCAGCAAATGGTTTCTTG+GGG | 0.613973 | 2.4:-27904745 | None:intergenic |
| CCAGCATCAAGCATCCCTGA+TGG | 0.617380 | 2.4:+27905542 | MS.gene039007:CDS |
| TTTAAGCATCATCAAGAGCA+AGG | 0.617415 | 2.4:-27906542 | None:intergenic |
| GTTGCACAAATTCCAGAAGG+TGG | 0.617965 | 2.4:+27903283 | MS.gene039007:CDS |
| AATGTCAACTTTCTCCAACA+AGG | 0.622415 | 2.4:-27904813 | None:intergenic |
| CCAAGAAGTTCAGACAACCT+TGG | 0.623502 | 2.4:-27903096 | None:intergenic |
| GTAACAACCATCATTGGAGG+TGG | 0.624533 | 2.4:+27906408 | MS.gene039007:CDS |
| CCAATCCCATCCATCCATCA+GGG | 0.624681 | 2.4:-27905556 | None:intergenic |
| CTCCACAAGAGAGGACCCAA+TGG | 0.625121 | 2.4:-27904888 | None:intergenic |
| ATAAGGAACCCTGCAACAGA+CGG | 0.625768 | 2.4:-27903469 | None:intergenic |
| CAAGTTTGCAGCAGGAACAG+AGG | 0.631205 | 2.4:+27905673 | MS.gene039007:CDS |
| TTGGTTGCACAAATTCCAGA+AGG | 0.634668 | 2.4:+27903280 | MS.gene039007:CDS |
| CATTCACATAAAGATCAGCA+AGG | 0.644101 | 2.4:-27903384 | None:intergenic |
| ATTCACATAAAGATCAGCAA+GGG | 0.647527 | 2.4:-27903383 | None:intergenic |
| ATATTCAAGTTATCATCCAA+AGG | 0.649646 | 2.4:-27902442 | None:intergenic |
| TGCTGCCGATGCTAACGACA+AGG | 0.655852 | 2.4:+27905009 | MS.gene039007:CDS |
| CCAGCTTAGAGCTTCTTGAG+GGG | 0.656655 | 2.4:+27906502 | MS.gene039007:CDS |
| TGATAGTAGGAACAGCAGCA+CGG | 0.660384 | 2.4:-27902483 | None:intergenic |
| TGCTGATGACTGTATTGGTG+AGG | 0.677716 | 2.4:+27903246 | MS.gene039007:CDS |
| CATCAAGAGCAAGGACTCCG+GGG | 0.688602 | 2.4:-27906533 | None:intergenic |
| AGAGAATGTGAGTTTCCACA+AGG | 0.690488 | 2.4:+27903318 | MS.gene039007:CDS |
| CATTGCCAAGAAATTAGCTG+AGG | 0.702784 | 2.4:+27906371 | MS.gene039007:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAGATTATAAATTGAAAA+TGG | - | chr2.4:27905913-27905932 | None:intergenic | 10.0% |
| !!! | TAAGATTATTATAATACTTT+TGG | + | chr2.4:27906039-27906058 | MS.gene039007:intron | 10.0% |
| !!! | TAATAATAATTACTTTTAGA+TGG | + | chr2.4:27904071-27904090 | MS.gene039007:intron | 10.0% |
| !! | ATTATTAACTTATTACACAA+AGG | - | chr2.4:27903194-27903213 | None:intergenic | 15.0% |
| !! | TCAAATATAAAGTAATGAAA+AGG | - | chr2.4:27905997-27906016 | None:intergenic | 15.0% |
| !!! | CAAATTTTAGAGAAAAAATT+GGG | + | chr2.4:27904237-27904256 | MS.gene039007:intron | 15.0% |
| !!! | TCAAATTTTAGAGAAAAAAT+TGG | + | chr2.4:27904236-27904255 | MS.gene039007:intron | 15.0% |
| !!! | TTACTTATTTGATTTTTTGA+AGG | + | chr2.4:27902801-27902820 | MS.gene039007:intron | 15.0% |
| !!! | TTATTAGTTTAATTGTTATG+TGG | + | chr2.4:27902754-27902773 | MS.gene039007:intron | 15.0% |
| !! | ATAGTAAATACACACATATA+GGG | + | chr2.4:27906168-27906187 | MS.gene039007:intron | 20.0% |
| !! | CATGTAAAATACATATGATT+TGG | + | chr2.4:27905153-27905172 | MS.gene039007:intron | 20.0% |
| !! | TACAAAATAATGTCTAATAG+CGG | + | chr2.4:27904575-27904594 | MS.gene039007:intron | 20.0% |
| !! | TTGCGATTTCATTATATAAT+TGG | + | chr2.4:27903514-27903533 | MS.gene039007:intron | 20.0% |
| !! | TTGGTTATTATGATTTAACA+CGG | + | chr2.4:27906211-27906230 | MS.gene039007:intron | 20.0% |
| !! | TTGTACTAAATAGCATATTA+CGG | - | chr2.4:27905264-27905283 | None:intergenic | 20.0% |
| !!! | ATCAAAAAACTAGTCTATAT+TGG | - | chr2.4:27905862-27905881 | None:intergenic | 20.0% |
| !!! | CAAATCATATGTATTTTACA+TGG | - | chr2.4:27905155-27905174 | None:intergenic | 20.0% |
| !!! | CTGTTACAATTTTTCTATTT+AGG | + | chr2.4:27905378-27905397 | MS.gene039007:intron | 20.0% |
| !!! | CTTTAAAGACATGAAATTAT+CGG | - | chr2.4:27905730-27905749 | None:intergenic | 20.0% |
| !!! | TAATTTCATGTCTTTAAAGT+TGG | + | chr2.4:27905731-27905750 | MS.gene039007:intron | 20.0% |
| !!! | TATGATTTATACCTTTTACA+AGG | + | chr2.4:27904853-27904872 | MS.gene039007:CDS | 20.0% |
| !!! | TCAAAAAACTAGTCTATATT+GGG | - | chr2.4:27905861-27905880 | None:intergenic | 20.0% |
| !!! | TTGAACTTATAGCTTTTTTT+TGG | + | chr2.4:27903730-27903749 | MS.gene039007:intron | 20.0% |
| ! | AAACAAAAAAACAGGTGAAA+CGG | - | chr2.4:27902580-27902599 | None:intergenic | 25.0% |
| ! | AAATTGAAAATGGAAGAGTA+AGG | - | chr2.4:27905903-27905922 | None:intergenic | 25.0% |
| ! | AATATATGATCGTAAACCTA+GGG | - | chr2.4:27905428-27905447 | None:intergenic | 25.0% |
| ! | ACACTCAAAAACAAAAAAAC+AGG | - | chr2.4:27902588-27902607 | None:intergenic | 25.0% |
| ! | ACATGAATCATGATCAAAAT+CGG | - | chr2.4:27902613-27902632 | None:intergenic | 25.0% |
| ! | ACCTAAATACTCAAATTAAG+TGG | - | chr2.4:27904203-27904222 | None:intergenic | 25.0% |
| ! | ATAAATATTGCTAATTGCTC+TGG | + | chr2.4:27904538-27904557 | MS.gene039007:intron | 25.0% |
| ! | ATGAAGAGATAAAGAAACTA+AGG | + | chr2.4:27902837-27902856 | MS.gene039007:intron | 25.0% |
| ! | CATAGTAAATACACACATAT+AGG | + | chr2.4:27906167-27906186 | MS.gene039007:intron | 25.0% |
| ! | CTACGAGATAATGATATTTA+TGG | + | chr2.4:27902665-27902684 | MS.gene039007:intron | 25.0% |
| ! | TAAATATTGCTAATTGCTCT+GGG | + | chr2.4:27904539-27904558 | MS.gene039007:intron | 25.0% |
| ! | TAATCTATCACTTACAAACT+GGG | + | chr2.4:27903921-27903940 | MS.gene039007:intron | 25.0% |
| ! | TATAACCAAGAATAATCAAC+AGG | - | chr2.4:27903217-27903236 | None:intergenic | 25.0% |
| ! | TATATTTGACTCATTTGATG+TGG | + | chr2.4:27906008-27906027 | MS.gene039007:intron | 25.0% |
| ! | TGAAAAGGAAAAATTAGACA+TGG | + | chr2.4:27903811-27903830 | MS.gene039007:intron | 25.0% |
| ! | TGAAGAGATAAAGAAACTAA+GGG | + | chr2.4:27902838-27902857 | MS.gene039007:intron | 25.0% |
| ! | TGGACAAATTAAAATGAGAA+AGG | - | chr2.4:27905944-27905963 | None:intergenic | 25.0% |
| ! | TTAAAATGAGAAAGGATTGT+TGG | - | chr2.4:27905936-27905955 | None:intergenic | 25.0% |
| ! | TTAATCTATCACTTACAAAC+TGG | + | chr2.4:27903920-27903939 | MS.gene039007:intron | 25.0% |
| ! | TTTGTACAAAAGTTCAAATG+AGG | + | chr2.4:27905098-27905117 | MS.gene039007:intron | 25.0% |
| !! | ACCACTTAATTTGAGTATTT+AGG | + | chr2.4:27904199-27904218 | MS.gene039007:intron | 25.0% |
| !! | AGTTAAAAACTTGGAACTTT+TGG | + | chr2.4:27906246-27906265 | MS.gene039007:intron | 25.0% |
| !! | ATAATCCTGTTGATTATTCT+TGG | + | chr2.4:27903209-27903228 | MS.gene039007:intron | 25.0% |
| !! | ATATTCAAGTTATCATCCAA+AGG | - | chr2.4:27902445-27902464 | None:intergenic | 25.0% |
| !! | ATTATGCTTTTCGTATTAGT+TGG | + | chr2.4:27905033-27905052 | MS.gene039007:intron | 25.0% |
| !! | TGTTGATTATTCTTGGTTAT+AGG | + | chr2.4:27903216-27903235 | MS.gene039007:intron | 25.0% |
| !! | TTATGCTTTTCGTATTAGTT+GGG | + | chr2.4:27905034-27905053 | MS.gene039007:intron | 25.0% |
| !! | TTTTCTTGAATCTGTTTTCA+GGG | + | chr2.4:27903027-27903046 | MS.gene039007:intron | 25.0% |
| !! | TTTTTCTTGAATCTGTTTTC+AGG | + | chr2.4:27903026-27903045 | MS.gene039007:intron | 25.0% |
| !!! | TCATTTTAATTTGTCCAATG+CGG | + | chr2.4:27905947-27905966 | MS.gene039007:intron | 25.0% |
| AAACAAGCAAACAAGAATGA+TGG | - | chr2.4:27903171-27903190 | None:intergenic | 30.0% | |
| AAGTCACTAATAACACACTT+AGG | - | chr2.4:27902981-27903000 | None:intergenic | 30.0% | |
| ACAAAAGTTCAAATGAGGAT+GGG | + | chr2.4:27905103-27905122 | MS.gene039007:intron | 30.0% | |
| AGACTTGGAAGTTAAAAACT+TGG | + | chr2.4:27906237-27906256 | MS.gene039007:intron | 30.0% | |
| AGTCACTAATAACACACTTA+GGG | - | chr2.4:27902980-27902999 | None:intergenic | 30.0% | |
| ATTCACATAAAGATCAGCAA+GGG | - | chr2.4:27903386-27903405 | None:intergenic | 30.0% | |
| CAATATATGATCGTAAACCT+AGG | - | chr2.4:27905429-27905448 | None:intergenic | 30.0% | |
| GTATTGGGCTTAAAAACATA+TGG | + | chr2.4:27903953-27903972 | MS.gene039007:intron | 30.0% | |
| TACAAAAGTTCAAATGAGGA+TGG | + | chr2.4:27905102-27905121 | MS.gene039007:intron | 30.0% | |
| TATGCAAAATTGCTTCATTG+TGG | + | chr2.4:27905704-27905723 | MS.gene039007:intron | 30.0% | |
| TCATCTCTTATCTAAGTTCA+AGG | + | chr2.4:27904149-27904168 | MS.gene039007:intron | 30.0% | |
| TTGTAATGTTCAATTGTTCC+AGG | + | chr2.4:27904691-27904710 | MS.gene039007:intron | 30.0% | |
| TTTCTGCAGGTTTATTTAAC+AGG | - | chr2.4:27905785-27905804 | None:intergenic | 30.0% | |
| ! | ATCAAATACTTGACTGGTTA+TGG | + | chr2.4:27902502-27902521 | MS.gene039007:CDS | 30.0% |
| ! | CATATGATTTGGAAATTCTG+TGG | + | chr2.4:27905164-27905183 | MS.gene039007:intron | 30.0% |
| ! | CTTTATGTGAATGATGCTTT+TGG | + | chr2.4:27903394-27903413 | MS.gene039007:CDS | 30.0% |
| ! | TTTCAGCTTTTCACTTGTTT+TGG | - | chr2.4:27905817-27905836 | None:intergenic | 30.0% |
| ! | TTTTTGTTCTCAACGTGAAA+AGG | - | chr2.4:27903641-27903660 | None:intergenic | 30.0% |
| !! | TATTAGTGACTTTTGAGTGA+TGG | + | chr2.4:27902989-27903008 | MS.gene039007:intron | 30.0% |
| !!! | CATTTTAATTTGTCCAATGC+GGG | + | chr2.4:27905948-27905967 | MS.gene039007:intron | 30.0% |
| AAAAAACAGGTGAAACGGAT+AGG | - | chr2.4:27902575-27902594 | None:intergenic | 35.0% | |
| AAAGGAGTAACAACCATCAT+TGG | + | chr2.4:27906402-27906421 | MS.gene039007:CDS | 35.0% | |
| AAAGTTGACATTCTCTTGCT+TGG | + | chr2.4:27904824-27904843 | MS.gene039007:CDS | 35.0% | |
| AACGTGAAAAGGTCCAAAAA+CGG | - | chr2.4:27903630-27903649 | None:intergenic | 35.0% | |
| AAGAAATTAGCTGAGGTAAG+TGG | + | chr2.4:27906378-27906397 | MS.gene039007:CDS | 35.0% | |
| AAGATTGCTGATGACTGTAT+TGG | + | chr2.4:27903241-27903260 | MS.gene039007:CDS | 35.0% | |
| AAGCTGAATTGAAAGGAAAG+AGG | + | chr2.4:27902392-27902411 | MS.gene039007:CDS | 35.0% | |
| AATAGCAGCAAATGGTTTCT+TGG | - | chr2.4:27904750-27904769 | None:intergenic | 35.0% | |
| AATGTCAACTTTCTCCAACA+AGG | - | chr2.4:27904816-27904835 | None:intergenic | 35.0% | |
| ACTTACCTCAGCTAATTTCT+TGG | - | chr2.4:27906379-27906398 | None:intergenic | 35.0% | |
| AGAAAGAGAATGAGAAACAG+CGG | + | chr2.4:27903867-27903886 | MS.gene039007:intron | 35.0% | |
| AGAGAAAGAGTGAGATGAAA+AGG | + | chr2.4:27903796-27903815 | MS.gene039007:intron | 35.0% | |
| AGCATCAATGTTGTCAATCA+TGG | - | chr2.4:27905360-27905379 | None:intergenic | 35.0% | |
| AGCTGAATTGAAAGGAAAGA+GGG | + | chr2.4:27902393-27902412 | MS.gene039007:CDS | 35.0% | |
| AGGTCTAATCAAATTCAGCT+AGG | - | chr2.4:27905323-27905342 | None:intergenic | 35.0% | |
| ATAGCAGCAAATGGTTTCTT+GGG | - | chr2.4:27904749-27904768 | None:intergenic | 35.0% | |
| ATCAAATTCAGCTAGGACTA+TGG | - | chr2.4:27905316-27905335 | None:intergenic | 35.0% | |
| ATCATATGGAATGGACCAAT+GGG | + | chr2.4:27905635-27905654 | MS.gene039007:CDS | 35.0% | |
| CAAAACCTTCAATGAAGCAT+TGG | + | chr2.4:27905598-27905617 | MS.gene039007:CDS | 35.0% | |
| CAAAAGTTCAAATGAGGATG+GGG | + | chr2.4:27905104-27905123 | MS.gene039007:intron | 35.0% | |
| CATACAAATAACGGTCTTCA+CGG | - | chr2.4:27904406-27904425 | None:intergenic | 35.0% | |
| CATTCACATAAAGATCAGCA+AGG | - | chr2.4:27903387-27903406 | None:intergenic | 35.0% | |
| CATTGTTAAATAGCGACTCA+AGG | + | chr2.4:27903540-27903559 | MS.gene039007:intron | 35.0% | |
| CCTACTATCAAATACTTGAC+TGG | + | chr2.4:27902496-27902515 | MS.gene039007:CDS | 35.0% | |
| CGACTCAAGGTTTCAAAAAA+CGG | + | chr2.4:27903553-27903572 | MS.gene039007:intron | 35.0% | |
| CTATAGCCTATAGCGATATA+GGG | - | chr2.4:27905215-27905234 | None:intergenic | 35.0% | |
| GCTCTGCAATGTTGTTATAT+TGG | + | chr2.4:27905189-27905208 | MS.gene039007:intron | 35.0% | |
| GGTTGATCTAAATGTTCCTT+TGG | + | chr2.4:27902426-27902445 | MS.gene039007:CDS | 35.0% | |
| GTGACTTAGGTAAGAACATT+TGG | + | chr2.4:27906192-27906211 | MS.gene039007:intron | 35.0% | |
| TAATACCTTGTCGTTAGCAT+CGG | - | chr2.4:27905017-27905036 | None:intergenic | 35.0% | |
| TCAAACTCAAAAACACCCAT+TGG | - | chr2.4:27905653-27905672 | None:intergenic | 35.0% | |
| TCATGGATCGCTGAAAATTA+AGG | - | chr2.4:27905343-27905362 | None:intergenic | 35.0% | |
| TCTCAAAAAGCCAATCCAAA+CGG | + | chr2.4:27902953-27902972 | MS.gene039007:intron | 35.0% | |
| TTGAAGGAAGCTGAATTGAA+AGG | + | chr2.4:27902385-27902404 | MS.gene039007:CDS | 35.0% | |
| TTTAAGCCCAATACAATACC+TGG | - | chr2.4:27903947-27903966 | None:intergenic | 35.0% | |
| ! | AAACCATTTGCTGCTATTGT+TGG | + | chr2.4:27904752-27904771 | MS.gene039007:CDS | 35.0% |
| ! | CATTTTTCTCTTCTTCCTTG+TGG | - | chr2.4:27903336-27903355 | None:intergenic | 35.0% |
| ! | CCAGTCAAGTATTTGATAGT+AGG | - | chr2.4:27902499-27902518 | None:intergenic | 35.0% |
| ! | TAGCTTTTGAATCACGTAGA+CGG | + | chr2.4:27903754-27903773 | MS.gene039007:intron | 35.0% |
| ! | TATACCTTTTACAAGGCTCA+GGG | + | chr2.4:27904860-27904879 | MS.gene039007:CDS | 35.0% |
| ! | TGAATGAAGAGTGTGTGTAT+TGG | - | chr2.4:27904036-27904055 | None:intergenic | 35.0% |
| ! | TGTTGTGTTGTATGTTTCTG+AGG | - | chr2.4:27903979-27903998 | None:intergenic | 35.0% |
| ! | TTATACCTTTTACAAGGCTC+AGG | + | chr2.4:27904859-27904878 | MS.gene039007:CDS | 35.0% |
| !! | ATAGCGGTGTTATAGTTTAG+TGG | + | chr2.4:27904509-27904528 | MS.gene039007:intron | 35.0% |
| !! | TGCTTCATTGAAGGTTTTGA+TGG | - | chr2.4:27905597-27905616 | None:intergenic | 35.0% |
| !! | TGGATGTAGTTTTGCTGAAT+TGG | + | chr2.4:27905751-27905770 | MS.gene039007:intron | 35.0% |
| !! | TTGAAGGTTTTGATGGAATC+AGG | - | chr2.4:27905590-27905609 | None:intergenic | 35.0% |
| !!! | CTTGGAACTTTTGGTTCAAT+TGG | + | chr2.4:27906255-27906274 | MS.gene039007:intron | 35.0% |
| AAAAGGTCCAAAAACGGTCA+CGG | - | chr2.4:27903624-27903643 | None:intergenic | 40.0% | |
| AAAGAAACTAAGGGCTCGTT+TGG | + | chr2.4:27902847-27902866 | MS.gene039007:intron | 40.0% | |
| AAGATGAGTCACATCTCAAC+TGG | + | chr2.4:27906471-27906490 | MS.gene039007:CDS | 40.0% | |
| ACAAGAGTCAGACCATCATA+TGG | + | chr2.4:27905621-27905640 | MS.gene039007:CDS | 40.0% | |
| ACACATATAGGGAGTGACTT+AGG | + | chr2.4:27906179-27906198 | MS.gene039007:intron | 40.0% | |
| AGAGAATGTGAGTTTCCACA+AGG | + | chr2.4:27903318-27903337 | MS.gene039007:CDS | 40.0% | |
| AGAGGCTTCAAACTGTACTT+AGG | - | chr2.4:27903072-27903091 | None:intergenic | 40.0% | |
| AGTCAGACCATCATATGGAA+TGG | + | chr2.4:27905626-27905645 | MS.gene039007:CDS | 40.0% | |
| AGTCATTCTTTCCAGTCATC+TGG | + | chr2.4:27902531-27902550 | MS.gene039007:CDS | 40.0% | |
| AGTGTATGAGGAAGGGAATA+AGG | + | chr2.4:27903891-27903910 | MS.gene039007:intron | 40.0% | |
| ATGAGGAAGGGAATAAGGTT+AGG | + | chr2.4:27903896-27903915 | MS.gene039007:intron | 40.0% | |
| CAAGGTTTCAAAAAACGGAC+CGG | + | chr2.4:27903558-27903577 | MS.gene039007:intron | 40.0% | |
| CACATCAGTTGGAAGCAAAA+GGG | - | chr2.4:27904972-27904991 | None:intergenic | 40.0% | |
| CAGATGTTATACCAGATGAC+TGG | - | chr2.4:27902545-27902564 | None:intergenic | 40.0% | |
| CATCATATGGAATGGACCAA+TGG | + | chr2.4:27905634-27905653 | MS.gene039007:CDS | 40.0% | |
| CATTGCCAAGAAATTAGCTG+AGG | + | chr2.4:27906371-27906390 | MS.gene039007:CDS | 40.0% | |
| CATTGGTCCATTCCATATGA+TGG | - | chr2.4:27905636-27905655 | None:intergenic | 40.0% | |
| CGGAGTTATTGAATCCTTGT+TGG | + | chr2.4:27904799-27904818 | MS.gene039007:CDS | 40.0% | |
| CGTTAAGGTTGTCACGATTT+CGG | - | chr2.4:27904444-27904463 | None:intergenic | 40.0% | |
| CTCAAAAAGCCAATCCAAAC+GGG | + | chr2.4:27902954-27902973 | MS.gene039007:intron | 40.0% | |
| CTCAGCTAATTTCTTGGCAA+TGG | - | chr2.4:27906373-27906392 | None:intergenic | 40.0% | |
| CTGAAAAACCCATCACGAAT+TGG | + | chr2.4:27905831-27905850 | MS.gene039007:intron | 40.0% | |
| CTTGTCCAATGCTTCATTGA+AGG | - | chr2.4:27905606-27905625 | None:intergenic | 40.0% | |
| GACATGGAGAGACAAATAGA+TGG | + | chr2.4:27903827-27903846 | MS.gene039007:intron | 40.0% | |
| GATTTAACACGGATGAGACT+TGG | + | chr2.4:27906222-27906241 | MS.gene039007:intron | 40.0% | |
| GCTATAGCCTATAGCGATAT+AGG | - | chr2.4:27905216-27905235 | None:intergenic | 40.0% | |
| GGATTCAATAACTCCGATCT+TGG | - | chr2.4:27904795-27904814 | None:intergenic | 40.0% | |
| GTCTGTAACAGAGTCAGTAA+CGG | - | chr2.4:27903710-27903729 | None:intergenic | 40.0% | |
| TACAAAGAGAGACCACAGAA+AGG | - | chr2.4:27905084-27905103 | None:intergenic | 40.0% | |
| TAGCAGCAAATGGTTTCTTG+GGG | - | chr2.4:27904748-27904767 | None:intergenic | 40.0% | |
| TATTGGCCCTATATCGCTAT+AGG | + | chr2.4:27905206-27905225 | MS.gene039007:intron | 40.0% | |
| TCCTGAATTCGCAAAGAAGT+TGG | + | chr2.4:27903357-27903376 | MS.gene039007:CDS | 40.0% | |
| TGAGGAAGGGAATAAGGTTA+GGG | + | chr2.4:27903897-27903916 | MS.gene039007:intron | 40.0% | |
| TGATCTTGCAACTTCACTTG+TGG | + | chr2.4:27904922-27904941 | MS.gene039007:CDS | 40.0% | |
| TTCACTTGTGGAAAAAGCCA+AGG | + | chr2.4:27904934-27904953 | MS.gene039007:CDS | 40.0% | |
| TTGGAAAACACAGTTTCTGC+AGG | - | chr2.4:27905798-27905817 | None:intergenic | 40.0% | |
| TTGGTTGCACAAATTCCAGA+AGG | + | chr2.4:27903280-27903299 | MS.gene039007:CDS | 40.0% | |
| ! | AAGGAAAGAGGGTTTTCGTT+AGG | + | chr2.4:27902404-27902423 | MS.gene039007:CDS | 40.0% |
| ! | AGGAAAGAGGGTTTTCGTTA+GGG | + | chr2.4:27902405-27902424 | MS.gene039007:CDS | 40.0% |
| ! | ATAACCCTGAGCCTTGTAAA+AGG | - | chr2.4:27904867-27904886 | None:intergenic | 40.0% |
| ! | TAATTTGTCCAATGCGGGAT+AGG | + | chr2.4:27905953-27905972 | MS.gene039007:intron | 40.0% |
| ! | TACTTAGGTGTTACACCCTT+TGG | - | chr2.4:27903057-27903076 | None:intergenic | 40.0% |
| ! | TGTAGAAGCATGAGCTCTAT+GGG | - | chr2.4:27903425-27903444 | None:intergenic | 40.0% |
| !! | AAGGTTCTAAATAACGGTCG+CGG | - | chr2.4:27904482-27904501 | None:intergenic | 40.0% |
| !! | GTCGCCAAGGTTCTAAATAA+CGG | - | chr2.4:27904488-27904507 | None:intergenic | 40.0% |
| !! | TACAAAGCGTTGTCCAATAG+TGG | + | chr2.4:27905279-27905298 | MS.gene039007:intron | 40.0% |
| !! | TCAAAGGTGTCTTCCAAGAT+CGG | + | chr2.4:27904779-27904798 | MS.gene039007:CDS | 40.0% |
| AATCACGTAGACGGTGAAGT+TGG | + | chr2.4:27903763-27903782 | MS.gene039007:intron | 45.0% | |
| ACAGTTCCCTTTCCTTTCTG+TGG | + | chr2.4:27905069-27905088 | MS.gene039007:intron | 45.0% | |
| AGAAGCAAAACACCACCTTC+TGG | - | chr2.4:27903298-27903317 | None:intergenic | 45.0% | |
| AGAGAGACCACAGAAAGGAA+AGG | - | chr2.4:27905079-27905098 | None:intergenic | 45.0% | |
| AGAGCTCATGCTTCTACAGA+AGG | + | chr2.4:27903427-27903446 | MS.gene039007:CDS | 45.0% | |
| ATAAGGAACCCTGCAACAGA+CGG | - | chr2.4:27903472-27903491 | None:intergenic | 45.0% | |
| ATCATCAAGAGCAAGGACTC+CGG | - | chr2.4:27906538-27906557 | None:intergenic | 45.0% | |
| ATGAGTCACATCTCAACTGG+TGG | + | chr2.4:27906474-27906493 | MS.gene039007:CDS | 45.0% | |
| CAACTAGATAGTCAAGCTCC+TGG | - | chr2.4:27904712-27904731 | None:intergenic | 45.0% | |
| CAGGAGCTTGACTATCTAGT+TGG | + | chr2.4:27904710-27904729 | MS.gene039007:intron | 45.0% | |
| CCAAGAAGTTCAGACAACCT+TGG | - | chr2.4:27903099-27903118 | None:intergenic | 45.0% | |
| CCAAGGTTGTCTGAACTTCT+TGG | + | chr2.4:27903096-27903115 | MS.gene039007:CDS | 45.0% | |
| CCACATCAGTTGGAAGCAAA+AGG | - | chr2.4:27904973-27904992 | None:intergenic | 45.0% | |
| CCACCAACAATAGCAGCAAA+TGG | - | chr2.4:27904758-27904777 | None:intergenic | 45.0% | |
| CGGACGCTGCATACAAATAA+CGG | - | chr2.4:27904415-27904434 | None:intergenic | 45.0% | |
| CTTGCGATGACTATTACCCT+AGG | + | chr2.4:27905409-27905428 | MS.gene039007:intron | 45.0% | |
| GAGAGACCACAGAAAGGAAA+GGG | - | chr2.4:27905078-27905097 | None:intergenic | 45.0% | |
| GAGTTTGACAAGTTTGCAGC+AGG | + | chr2.4:27905665-27905684 | MS.gene039007:CDS | 45.0% | |
| GCCAACTTCTTTGCGAATTC+AGG | - | chr2.4:27903361-27903380 | None:intergenic | 45.0% | |
| GGAGTAACAACCATCATTGG+AGG | + | chr2.4:27906405-27906424 | MS.gene039007:CDS | 45.0% | |
| GGATGGATGGGATTGGATAT+TGG | + | chr2.4:27905563-27905582 | MS.gene039007:CDS | 45.0% | |
| GTAACAACCATCATTGGAGG+TGG | + | chr2.4:27906408-27906427 | MS.gene039007:CDS | 45.0% | |
| GTCTGAACTTCTTGGAACTC+AGG | + | chr2.4:27903104-27903123 | MS.gene039007:CDS | 45.0% | |
| GTTGACATTCTCTTGCTTGG+TGG | + | chr2.4:27904827-27904846 | MS.gene039007:CDS | 45.0% | |
| GTTGCACAAATTCCAGAAGG+TGG | + | chr2.4:27903283-27903302 | MS.gene039007:CDS | 45.0% | |
| TAGAACCTTGGCGACTATAG+CGG | + | chr2.4:27904493-27904512 | MS.gene039007:intron | 45.0% | |
| TATCACTTACAAACTGGGCC+AGG | + | chr2.4:27903926-27903945 | MS.gene039007:intron | 45.0% | |
| TCACAGCAAAATCGCCGTTA+CGG | + | chr2.4:27903661-27903680 | MS.gene039007:intron | 45.0% | |
| TCAGACAACCTTGGTACAAG+AGG | - | chr2.4:27903090-27903109 | None:intergenic | 45.0% | |
| TGATAGTAGGAACAGCAGCA+CGG | - | chr2.4:27902486-27902505 | None:intergenic | 45.0% | |
| TGGGTTCACCAATTCGTGAT+GGG | - | chr2.4:27905842-27905861 | None:intergenic | 45.0% | |
| TGGTGAGGAAGTTGAGAAGT+TGG | + | chr2.4:27903261-27903280 | MS.gene039007:CDS | 45.0% | |
| TGGTTTCTTGGGGTTCAACA+CGG | - | chr2.4:27904738-27904757 | None:intergenic | 45.0% | |
| TGTCACGATTTCGGCTGTAA+CGG | - | chr2.4:27904435-27904454 | None:intergenic | 45.0% | |
| TTAGCTGAGGTAAGTGGCAA+AGG | + | chr2.4:27906384-27906403 | MS.gene039007:CDS | 45.0% | |
| TTCAAAAAACGGACCGGTAC+CGG | + | chr2.4:27903564-27903583 | MS.gene039007:intron | 45.0% | |
| TTGGGTTCACCAATTCGTGA+TGG | - | chr2.4:27905843-27905862 | None:intergenic | 45.0% | |
| ! | AACTGGGCCAGGTATTGTAT+TGG | + | chr2.4:27903937-27903956 | MS.gene039007:intron | 45.0% |
| ! | AAGAAGCGTGGGAACATTGA+AGG | + | chr2.4:27902369-27902388 | MS.gene039007:CDS | 45.0% |
| ! | ACTGGGCCAGGTATTGTATT+GGG | + | chr2.4:27903938-27903957 | MS.gene039007:intron | 45.0% |
| ! | ATGGCGACAAAAAGAAGCGT+GGG | + | chr2.4:27902358-27902377 | MS.gene039007:CDS | 45.0% |
| ! | CCATTTGCTGCTATTGTTGG+TGG | + | chr2.4:27904755-27904774 | MS.gene039007:CDS | 45.0% |
| ! | CCTTATGCAGAAGGTATGCA+GGG | + | chr2.4:27903486-27903505 | MS.gene039007:intron | 45.0% |
| ! | CCTTTTGCTTCCAACTGATG+TGG | + | chr2.4:27904970-27904989 | MS.gene039007:CDS | 45.0% |
| ! | CTGTAGAAGCATGAGCTCTA+TGG | - | chr2.4:27903426-27903445 | None:intergenic | 45.0% |
| ! | GCGACCGTTATTTAGAACCT+TGG | + | chr2.4:27904481-27904500 | MS.gene039007:intron | 45.0% |
| ! | GGTGTTGCAATAGCCACTAT+TGG | - | chr2.4:27905295-27905314 | None:intergenic | 45.0% |
| ! | GTAGACGGTGAAGTTGGTTA+TGG | + | chr2.4:27903769-27903788 | MS.gene039007:intron | 45.0% |
| ! | GTTTGAAGCCTCTTGTACCA+AGG | + | chr2.4:27903079-27903098 | MS.gene039007:CDS | 45.0% |
| ! | TCCTTATGCAGAAGGTATGC+AGG | + | chr2.4:27903485-27903504 | MS.gene039007:intron | 45.0% |
| ! | TGCTGATGACTGTATTGGTG+AGG | + | chr2.4:27903246-27903265 | MS.gene039007:CDS | 45.0% |
| !! | CTGCCGATACCGATTTGTAA+CGG | - | chr2.4:27903598-27903617 | None:intergenic | 45.0% |
| !! | TGCTATTGTTGGTGGCTCAA+AGG | + | chr2.4:27904763-27904782 | MS.gene039007:CDS | 45.0% |
| !! | TGTTTTCAGGGACGTCCAAA+GGG | + | chr2.4:27903039-27903058 | MS.gene039007:intron | 45.0% |
| !! | TATAAAACATATAAATTTAA+AGG | + | chr2.4:27902730-27902749 | MS.gene039007:intron | 5.0% |
| !! | TATTTATTATGTTATAATTA+TGG | + | chr2.4:27904293-27904312 | MS.gene039007:intron | 5.0% |
| AAGGCTCAGGGTTATGCCAT+TGG | + | chr2.4:27904872-27904891 | MS.gene039007:CDS | 50.0% | |
| AAGGGAAACTCCTTTCGCCT+TGG | - | chr2.4:27904954-27904973 | None:intergenic | 50.0% | |
| ACTTGAAGCCGTCTGTTGCA+GGG | + | chr2.4:27903461-27903480 | MS.gene039007:CDS | 50.0% | |
| AGAAACAGCGGCAGTGTATG+AGG | + | chr2.4:27903879-27903898 | MS.gene039007:intron | 50.0% | |
| AGAGTCACCACCTCCAATGA+TGG | - | chr2.4:27906418-27906437 | None:intergenic | 50.0% | |
| AGGCTCAGGGTTATGCCATT+GGG | + | chr2.4:27904873-27904892 | MS.gene039007:CDS | 50.0% | |
| AGTCACATCTCAACTGGTGG+AGG | + | chr2.4:27906477-27906496 | MS.gene039007:CDS | 50.0% | |
| ATTTGTAACGGCCGCAATCC+CGG | - | chr2.4:27903586-27903605 | None:intergenic | 50.0% | |
| CAAGTTTGCAGCAGGAACAG+AGG | + | chr2.4:27905673-27905692 | MS.gene039007:CDS | 50.0% | |
| CATCAAGCATCCCTGATGGA+TGG | + | chr2.4:27905546-27905565 | MS.gene039007:CDS | 50.0% | |
| CCAATCCCATCCATCCATCA+GGG | - | chr2.4:27905559-27905578 | None:intergenic | 50.0% | |
| CCAGCTTAGAGCTTCTTGAG+GGG | + | chr2.4:27906502-27906521 | MS.gene039007:CDS | 50.0% | |
| CCCTGCATACCTTCTGCATA+AGG | - | chr2.4:27903489-27903508 | None:intergenic | 50.0% | |
| CGGCCGTTACAAATCGGTAT+CGG | + | chr2.4:27903592-27903611 | MS.gene039007:intron | 50.0% | |
| CTCTGTAGCAGCTGTTGAGA+AGG | + | chr2.4:27906434-27906453 | MS.gene039007:CDS | 50.0% | |
| CTTGTCTTCCTCCACAAGAG+AGG | - | chr2.4:27904900-27904919 | None:intergenic | 50.0% | |
| GAGTCAGTAACGGCATTTCG+CGG | - | chr2.4:27903700-27903719 | None:intergenic | 50.0% | |
| GCCAGCTTAGAGCTTCTTGA+GGG | + | chr2.4:27906501-27906520 | MS.gene039007:CDS | 50.0% | |
| GGATTGCGGCCGTTACAAAT+CGG | + | chr2.4:27903586-27903605 | MS.gene039007:intron | 50.0% | |
| GTAGCAGCTGTTGAGAAGGT+TGG | + | chr2.4:27906438-27906457 | MS.gene039007:CDS | 50.0% | |
| GTGGAAAAAGCCAAGGCGAA+AGG | + | chr2.4:27904941-27904960 | MS.gene039007:CDS | 50.0% | |
| GTGTCGTCATTCGCAGATCA+CGG | - | chr2.4:27904635-27904654 | None:intergenic | 50.0% | |
| TAACACACTTAGGGCCCGTT+TGG | - | chr2.4:27902971-27902990 | None:intergenic | 50.0% | |
| TAACACCGCTATAGTCGCCA+AGG | - | chr2.4:27904501-27904520 | None:intergenic | 50.0% | |
| TACTTGAAGCCGTCTGTTGC+AGG | + | chr2.4:27903460-27903479 | MS.gene039007:CDS | 50.0% | |
| TAGCGGCTAGAGCAATGTTG+TGG | + | chr2.4:27904592-27904611 | MS.gene039007:intron | 50.0% | |
| TCAAAAAACGGACCGGTACC+GGG | + | chr2.4:27903565-27903584 | MS.gene039007:intron | 50.0% | |
| TCAGCGATGACCACATCAGT+TGG | - | chr2.4:27904983-27905002 | None:intergenic | 50.0% | |
| TCATCAAGAGCAAGGACTCC+GGG | - | chr2.4:27906537-27906556 | None:intergenic | 50.0% | |
| TCCAATCCCATCCATCCATC+AGG | - | chr2.4:27905560-27905579 | None:intergenic | 50.0% | |
| TGCAGGGTTCCTTATGCAGA+AGG | + | chr2.4:27903477-27903496 | MS.gene039007:CDS | 50.0% | |
| TGCCAGCTTAGAGCTTCTTG+AGG | + | chr2.4:27906500-27906519 | MS.gene039007:CDS | 50.0% | |
| ! | AAGCATCCCTGATGGATGGA+TGG | + | chr2.4:27905550-27905569 | MS.gene039007:CDS | 50.0% |
| ! | AGCATCCCTGATGGATGGAT+GGG | + | chr2.4:27905551-27905570 | MS.gene039007:CDS | 50.0% |
| ! | GACATTCTCTTGCTTGGTGG+AGG | + | chr2.4:27904830-27904849 | MS.gene039007:CDS | 50.0% |
| !! | CTGTTTTCAGGGACGTCCAA+AGG | + | chr2.4:27903038-27903057 | MS.gene039007:intron | 50.0% |
| ACAGCGGCAGTGTATGAGGA+AGG | + | chr2.4:27903883-27903902 | MS.gene039007:intron | 55.0% | |
| AGCTGCAACCTATCCCGCAT+TGG | - | chr2.4:27905964-27905983 | None:intergenic | 55.0% | |
| AGGTCCAAAAACGGTCACGG+TGG | - | chr2.4:27903621-27903640 | None:intergenic | 55.0% | |
| CACTTAGGGCCCGTTTGGAT+TGG | - | chr2.4:27902966-27902985 | None:intergenic | 55.0% | |
| CAGCGGCAGTGTATGAGGAA+GGG | + | chr2.4:27903884-27903903 | MS.gene039007:intron | 55.0% | |
| CATCAAGAGCAAGGACTCCG+GGG | - | chr2.4:27906536-27906555 | None:intergenic | 55.0% | |
| CATTGGGTCCTCTCTTGTGG+AGG | + | chr2.4:27904889-27904908 | MS.gene039007:CDS | 55.0% | |
| CCAGCATCAAGCATCCCTGA+TGG | + | chr2.4:27905542-27905561 | MS.gene039007:CDS | 55.0% | |
| CCATCAGGGATGCTTGATGC+TGG | - | chr2.4:27905545-27905564 | None:intergenic | 55.0% | |
| CTCCACAAGAGAGGACCCAA+TGG | - | chr2.4:27904891-27904910 | None:intergenic | 55.0% | |
| TGCCATTGGGTCCTCTCTTG+TGG | + | chr2.4:27904886-27904905 | MS.gene039007:CDS | 55.0% | |
| TGCTGCCGATGCTAACGACA+AGG | + | chr2.4:27905009-27905028 | MS.gene039007:CDS | 55.0% | |
| ! | CCCTGATGGATGGATGGGAT+TGG | + | chr2.4:27905556-27905575 | MS.gene039007:CDS | 55.0% |
| !! | CCCCTCAAGAAGCTCTAAGC+TGG | - | chr2.4:27906505-27906524 | None:intergenic | 55.0% |
| ACGGCATTTCGCGGCCGTAA+CGG | - | chr2.4:27903691-27903710 | None:intergenic | 60.0% | |
| GCCGTAACGGCGTTCCGTAA+CGG | - | chr2.4:27903678-27903697 | None:intergenic | 60.0% | |
| GCCGTTACGGAACGCCGTTA+CGG | + | chr2.4:27903674-27903693 | MS.gene039007:intron | 60.0% | |
| ! | GCAGCCACCGTGACCGTTTT+TGG | + | chr2.4:27903614-27903633 | MS.gene039007:intron | 60.0% |
| AACGGCCGCAATCCCGGTAC+CGG | - | chr2.4:27903580-27903599 | None:intergenic | 65.0% | |
| AGAGCAAGGACTCCGGGGAG+TGG | - | chr2.4:27906531-27906550 | None:intergenic | 65.0% | |
| CTTGAGGGGAAGCCACTCCC+CGG | + | chr2.4:27906516-27906535 | MS.gene039007:CDS | 65.0% | |
| TCGCGATCGCGGTCGCGTTA+AGG | - | chr2.4:27904459-27904478 | None:intergenic | 65.0% | |
| ! | ACGGACCGGTACCGGGATTG+CGG | + | chr2.4:27903572-27903591 | MS.gene039007:intron | 65.0% |
| AACGGTCGCGGTCGCGATCG+CGG | - | chr2.4:27904470-27904489 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 27902358 | 27906563 | 27902358 | ID=MS.gene039007 |
| chr2.4 | mRNA | 27902358 | 27906563 | 27902358 | ID=MS.gene039007.t1;Parent=MS.gene039007 |
| chr2.4 | exon | 27902358 | 27902552 | 27902358 | ID=MS.gene039007.t1.exon1;Parent=MS.gene039007.t1 |
| chr2.4 | CDS | 27902358 | 27902552 | 27902358 | ID=cds.MS.gene039007.t1;Parent=MS.gene039007.t1 |
| chr2.4 | exon | 27903048 | 27903125 | 27903048 | ID=MS.gene039007.t1.exon2;Parent=MS.gene039007.t1 |
| chr2.4 | CDS | 27903048 | 27903125 | 27903048 | ID=cds.MS.gene039007.t1;Parent=MS.gene039007.t1 |
| chr2.4 | exon | 27903238 | 27903498 | 27903238 | ID=MS.gene039007.t1.exon3;Parent=MS.gene039007.t1 |
| chr2.4 | CDS | 27903238 | 27903498 | 27903238 | ID=cds.MS.gene039007.t1;Parent=MS.gene039007.t1 |
| chr2.4 | exon | 27904713 | 27905030 | 27904713 | ID=MS.gene039007.t1.exon4;Parent=MS.gene039007.t1 |
| chr2.4 | CDS | 27904713 | 27905030 | 27904713 | ID=cds.MS.gene039007.t1;Parent=MS.gene039007.t1 |
| chr2.4 | exon | 27905536 | 27905694 | 27905536 | ID=MS.gene039007.t1.exon5;Parent=MS.gene039007.t1 |
| chr2.4 | CDS | 27905536 | 27905694 | 27905536 | ID=cds.MS.gene039007.t1;Parent=MS.gene039007.t1 |
| chr2.4 | exon | 27906369 | 27906563 | 27906369 | ID=MS.gene039007.t1.exon6;Parent=MS.gene039007.t1 |
| chr2.4 | CDS | 27906369 | 27906563 | 27906369 | ID=cds.MS.gene039007.t1;Parent=MS.gene039007.t1 |
| Gene Sequence |
| Protein sequence |
