AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene77615


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77615.t1 MTR_2g066110 99.374 479 3 0 1 479 1 479 0.0 939
MS.gene77615.t1 MTR_2g066120 88.442 398 46 0 77 474 4 401 0.0 701
MS.gene77615.t1 MTR_2g066130 85.678 398 57 0 77 474 4 401 0.0 686
MS.gene77615.t1 MTR_1242s0010 89.381 226 24 0 249 474 1 226 1.30e-140 403
MS.gene77615.t1 MTR_1680s0010 48.585 212 102 3 83 292 143 349 6.12e-52 181
MS.gene77615.t1 MTR_6g018680 30.198 404 272 5 78 479 83 478 6.38e-49 178
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77615.t1 AT1G56190 87.472 439 54 1 42 479 40 478 0.0 775
MS.gene77615.t1 AT3G12780 82.438 484 77 4 1 479 1 481 0.0 763
MS.gene77615.t1 AT1G56190 90.123 405 40 0 75 479 1 405 0.0 738
MS.gene77615.t1 AT1G79550 86.181 398 55 0 77 474 4 401 0.0 697
MS.gene77615.t1 AT1G79550 86.181 398 55 0 77 474 4 401 0.0 697

Find 166 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAGGTGCCAAGCTGTATT+TGG 0.198091 2.3:-30173290 None:intergenic
TTTGAGTGGTGCGGAGTTAA+AGG 0.229996 2.3:+30171926 MS.gene77615:CDS
GTCCATTCCATATGATAGTT+TGG 0.250786 2.3:-30174788 None:intergenic
CGCTGCAGCTGACCCTTTGT+TGG 0.275215 2.3:+30171818 MS.gene77615:CDS
GGGGAGGAGTGAGATGGTTG+TGG 0.281250 2.3:-30171700 None:intergenic
TCTAAGGTCTCATCTAAAAT+TGG 0.286199 2.3:+30174335 MS.gene77615:CDS
TGCAATTGTGGGTGGTTCTA+AGG 0.307721 2.3:+30174319 MS.gene77615:CDS
GGGAGGAGTGAGATGGTTGT+GGG 0.311165 2.3:-30171699 None:intergenic
GGATTATTGACAGGTTATTA+AGG 0.325099 2.3:+30173442 MS.gene77615:intron
CACCGGTGGTGGTGCAAGTT+TGG 0.328292 2.3:+30175399 MS.gene77615:CDS
ATTAAATATCTAATTCAAAA+TGG 0.335122 2.3:+30172044 MS.gene77615:CDS
TCCATTCCATATGATAGTTT+GGG 0.338357 2.3:-30174787 None:intergenic
TGGGGTGGTGGATGGGGAAG+AGG 0.341920 2.3:-30171733 None:intergenic
TAGGAACTTGACTACCTTGT+TGG 0.343922 2.3:+30174266 MS.gene77615:intron
AGGAACTTGACTACCTTGTT+GGG 0.344781 2.3:+30174267 MS.gene77615:intron
AGTCATTCTTTCTAGTCATT+TGG 0.346742 2.3:+30172073 MS.gene77615:CDS
TGAATTAGATATTTAATAGT+TGG 0.368159 2.3:-30172038 None:intergenic
CAAACCTGGCTGTTTGCATC+AGG 0.388375 2.3:-30174569 None:intergenic
TTGGAAGGCAAAGAGCTTCC+AGG 0.397132 2.3:+30175427 MS.gene77615:CDS
TATTTGGGAGTGACACCCTT+TGG 0.399527 2.3:-30173274 None:intergenic
TATTTGAAGCCATCTGTTGC+TGG 0.401801 2.3:+30173677 MS.gene77615:CDS
TCCAATGAGTTCAGAGAGCC+TGG 0.408008 2.3:-30173317 None:intergenic
AGGAGAGTTGGATGCGGGAG+GGG 0.411082 2.3:-30171758 None:intergenic
TCCAATCCCATCCAACCATC+AGG 0.411142 2.3:-30174717 None:intergenic
GGAGGAGTGAGATGGTTGTG+GGG 0.411898 2.3:-30171698 None:intergenic
TGAGGAGAGTTGGATGCGGG+AGG 0.417320 2.3:-30171760 None:intergenic
TGACCCTTTGTTGGCCGTGC+AGG 0.421965 2.3:+30171827 MS.gene77615:CDS
TTGAGTGGTGCGGAGTTAAA+GGG 0.422517 2.3:+30171927 MS.gene77615:CDS
AGAGGTGCCAAGCTGTATTT+GGG 0.433038 2.3:-30173289 None:intergenic
GCCCGCCCACTCCGCCGACT+TGG 0.433426 2.3:+30171792 MS.gene77615:CDS
GAGGAGTGAGATGGTTGTGG+GGG 0.435325 2.3:-30171697 None:intergenic
GGAGAGTTGGATGCGGGAGG+GGG 0.435773 2.3:-30171757 None:intergenic
TTCTGGACCAATACTGTCTT+CGG 0.442920 2.3:-30173465 None:intergenic
GGGCAGTATCAAGCCCAAAA+AGG 0.443174 2.3:+30174288 MS.gene77615:CDS
GACTCCCTCTGTTGATGCAT+GGG 0.445361 2.3:-30173648 None:intergenic
CGAAGCCAAGTCGGCGGAGT+GGG 0.446914 2.3:-30171797 None:intergenic
TCATCAAGGGCGAGGACACC+TGG 0.447264 2.3:-30175445 None:intergenic
GTAAGCGGGAGAGGAGTAAG+AGG 0.448191 2.3:+30171870 MS.gene77615:CDS
ATGCATTCGGTACTGCTCAC+AGG 0.450363 2.3:+30173624 MS.gene77615:CDS
TGGTGCAAGTTTGGAGCTAT+TGG 0.450844 2.3:+30175408 MS.gene77615:CDS
AGCCAAGTCGGCGGAGTGGG+CGG 0.455059 2.3:-30171794 None:intergenic
AAAGTTGACATCCTTCTTCT+CGG 0.456222 2.3:+30174380 MS.gene77615:CDS
TGCCATCCCTGATGGTTGGA+TGG 0.456434 2.3:+30174710 MS.gene77615:CDS
GCCAAGTCGGCGGAGTGGGC+GGG 0.460638 2.3:-30171793 None:intergenic
AAGAGGATTTAGTGGTGGGG+AGG 0.466020 2.3:-30171716 None:intergenic
CCCAGGCTCTCTGAACTCAT+TGG 0.467134 2.3:+30173316 MS.gene77615:CDS
GTGAGGACAGTAAGCGGGAG+AGG 0.473119 2.3:+30171861 MS.gene77615:CDS
TCAGTCTATTGCAAAGAAGT+TGG 0.473203 2.3:+30175276 MS.gene77615:intron
TAAAACATTCAATGAAGCAT+TGG 0.477391 2.3:+30174758 MS.gene77615:CDS
CGCCGAGGAATGAGGAGAGT+TGG 0.479460 2.3:-30171770 None:intergenic
CTCTGAACTCATTGGAATTG+AGG 0.480026 2.3:+30173324 MS.gene77615:CDS
TGGGGAAGAGGATTTAGTGG+TGG 0.482996 2.3:-30171721 None:intergenic
ATACCACCCAAACTATCATA+TGG 0.484602 2.3:+30174781 MS.gene77615:CDS
CCCTGATGGTTGGATGGGAT+TGG 0.487908 2.3:+30174716 MS.gene77615:CDS
GCTTGGCACCTCTTGTTCCC+AGG 0.490709 2.3:+30173299 MS.gene77615:CDS
AGAAGTAGAACTCCTCCGTC+TGG 0.491568 2.3:-30173512 None:intergenic
CGACTGGTGTGGCTTCATCA+AGG 0.491924 2.3:-30175459 None:intergenic
TCATTCCTCCACCGAGAAGA+AGG 0.493393 2.3:-30174391 None:intergenic
CCACCCACAATTGCAGCAAA+TGG 0.496096 2.3:-30174311 None:intergenic
CGCCCCTGATGCAAACAGCC+AGG 0.498814 2.3:+30174565 MS.gene77615:CDS
GAGGAGAGTTGGATGCGGGA+GGG 0.500293 2.3:-30171759 None:intergenic
GGTTGGATGGGATTGGACAT+TGG 0.502884 2.3:+30174723 MS.gene77615:CDS
CACCACCACCGGTGGATATG+TGG 0.503719 2.3:-30175390 None:intergenic
GACATCCTTCTTCTCGGTGG+AGG 0.504587 2.3:+30174386 MS.gene77615:CDS
TGACTCCCTCTGTTGATGCA+TGG 0.505501 2.3:-30173649 None:intergenic
ATCATATGGAATGGACCAAT+GGG 0.507151 2.3:+30174795 MS.gene77615:CDS
CTAACTTATCTTCCTCTACA+AGG 0.507420 2.3:-30174457 None:intergenic
TGGGCGGGCGCCGAGGAATG+AGG 0.508092 2.3:-30171778 None:intergenic
AAATTGTCTTACACGGCGAC+TGG 0.508972 2.3:-30175475 None:intergenic
TGCGGAGTTAAAGGGAAAGA+AGG 0.510243 2.3:+30171935 MS.gene77615:CDS
TTGGCCGACCTAAGTGGAAA+GGG 0.511148 2.3:+30175295 MS.gene77615:CDS
CCATCAGGGATGGCAGATGC+TGG 0.516699 2.3:-30174702 None:intergenic
GGCCGTGCAGGTGGCGTCGA+AGG 0.517503 2.3:+30171839 MS.gene77615:CDS
AGGAGATTCTGTTGCAGCTG+TGG 0.521058 2.3:+30175339 MS.gene77615:CDS
AAGGCCATTTGCTGCAATTG+TGG 0.523726 2.3:+30174307 MS.gene77615:CDS
GGGGAAGAGGATTTAGTGGT+GGG 0.524758 2.3:-30171720 None:intergenic
GAGTGACACACCCTTTGCCT+TGG 0.526454 2.3:-30174507 None:intergenic
CTCCAAACTTGCACCACCAC+CGG 0.527384 2.3:-30175401 None:intergenic
AGGCCATTTGCTGCAATTGT+GGG 0.527834 2.3:+30174308 MS.gene77615:CDS
AACCTGGCTGTTTGCATCAG+GGG 0.528684 2.3:-30174567 None:intergenic
ATTAAGGCCGAAGACAGTAT+TGG 0.529102 2.3:+30173458 MS.gene77615:CDS
TCTGCAATCACCACATCACT+TGG 0.530000 2.3:-30174536 None:intergenic
GGCGGAGTGGGCGGGCGCCG+AGG 0.530211 2.3:-30171785 None:intergenic
ATCCAACTCTCCTCATTCCT+CGG 0.531300 2.3:+30171768 MS.gene77615:CDS
TATCATATGGAATGGACCAA+TGG 0.531791 2.3:+30174794 MS.gene77615:CDS
GCCACCTGCACGGCCAACAA+AGG 0.536009 2.3:-30171831 None:intergenic
GCCATCCCTGATGGTTGGAT+GGG 0.536052 2.3:+30174711 MS.gene77615:CDS
CCACCTGCACGGCCAACAAA+GGG 0.536732 2.3:-30171830 None:intergenic
TGCAGGTGGCGTCGAAGGTG+AGG 0.538726 2.3:+30171844 MS.gene77615:CDS
CATCTGCCATCCCTGATGGT+TGG 0.539191 2.3:+30174706 MS.gene77615:CDS
ACCCAAACTATCATATGGAA+TGG 0.540873 2.3:+30174786 MS.gene77615:CDS
AGAATATTACTGATGATACT+AGG 0.543997 2.3:+30172000 MS.gene77615:CDS
GAGTTTGACAAGTTTGCTGT+TGG 0.546134 2.3:+30174825 MS.gene77615:CDS
GTAGAACTCCTCCGTCTGGA+AGG 0.546631 2.3:-30173508 None:intergenic
CCATTTGCTGCAATTGTGGG+TGG 0.547865 2.3:+30174311 MS.gene77615:CDS
CCCTTTGTTGGCCGTGCAGG+TGG 0.548579 2.3:+30171830 MS.gene77615:CDS
AAGAAGTTGGCCGACCTAAG+TGG 0.552641 2.3:+30175289 MS.gene77615:CDS
GTTGCAGCTGTGGAGAAAGT+AGG 0.554074 2.3:+30175349 MS.gene77615:CDS
CGAAGGTGAGGACAGTAAGC+GGG 0.555356 2.3:+30171856 MS.gene77615:CDS
TGGTCCAGAAGTAGAAAAGT+TGG 0.556192 2.3:+30173478 MS.gene77615:CDS
ATTGCTAAAGCCAAGGCAAA+GGG 0.556209 2.3:+30174497 MS.gene77615:CDS
AATTGCTAAAGCCAAGGCAA+AGG 0.556809 2.3:+30174496 MS.gene77615:CDS
TGCATTCGGTACTGCTCACA+GGG 0.557008 2.3:+30173625 MS.gene77615:CDS
GTCTTACACGGCGACTGGTG+TGG 0.558517 2.3:-30175470 None:intergenic
ACTCTTGCTGCCAAGTGATG+TGG 0.558831 2.3:+30174526 MS.gene77615:CDS
GCGAAGCCAAGTCGGCGGAG+TGG 0.559227 2.3:-30171798 None:intergenic
AAGGCACAAGGTCTTGCAGT+TGG 0.559506 2.3:+30174428 MS.gene77615:CDS
GACTGGTGTGGCTTCATCAA+GGG 0.559879 2.3:-30175458 None:intergenic
GAATGAGGAGAGTTGGATGC+GGG 0.560217 2.3:-30171763 None:intergenic
AGCCACATATCCACCGGTGG+TGG 0.561258 2.3:+30175388 MS.gene77615:CDS
TCAAACTCAAACACTCCCAT+TGG 0.562382 2.3:-30174810 None:intergenic
CAAGTTTGCTGTTGGAACAG+AGG 0.563230 2.3:+30174833 MS.gene77615:CDS
TCGAAGGTGAGGACAGTAAG+CGG 0.566470 2.3:+30171855 MS.gene77615:CDS
AGTGGTGGGGAGGAGTGAGA+TGG 0.566517 2.3:-30171706 None:intergenic
GGATGGGGAAGAGGATTTAG+TGG 0.567768 2.3:-30171724 None:intergenic
TCAGAGAGCCTGGGAACAAG+AGG 0.568936 2.3:-30173307 None:intergenic
CCAGCATCTGCCATCCCTGA+TGG 0.573732 2.3:+30174702 MS.gene77615:CDS
TTCTACTTCTCGAAAATGTG+AGG 0.575840 2.3:+30173525 MS.gene77615:CDS
AAATTTGCAGGGAAGGCCAA+AGG 0.578585 2.3:+30173258 MS.gene77615:intron
AACACTAATTGCTAAAGCCA+AGG 0.581644 2.3:+30174490 MS.gene77615:CDS
AGTAAGAGGAGTGGTGTCGA+TGG 0.583231 2.3:+30171884 MS.gene77615:CDS
AAACCTGGCTGTTTGCATCA+GGG 0.584272 2.3:-30174568 None:intergenic
CTGTATGTGAATGATGCATT+CGG 0.584611 2.3:+30173611 MS.gene77615:CDS
TCCAGAAGTAGAAAAGTTGG+TGG 0.584684 2.3:+30173481 MS.gene77615:CDS
CAGCTGCAGCGAAGCCAAGT+CGG 0.585809 2.3:-30171806 None:intergenic
GTTGGCCGACCTAAGTGGAA+AGG 0.587208 2.3:+30175294 MS.gene77615:CDS
GGGAAGAGGATTTAGTGGTG+GGG 0.587400 2.3:-30171719 None:intergenic
GTGTGGCTTCATCAAGGGCG+AGG 0.589679 2.3:-30175453 None:intergenic
TCCCATCCAACCATCAGGGA+TGG 0.591331 2.3:-30174712 None:intergenic
CACATACAGATCTGCGAGTG+CGG 0.592722 2.3:-30173597 None:intergenic
GCAAGTTTGGAGCTATTGGA+AGG 0.593757 2.3:+30175412 MS.gene77615:CDS
GTCATGAGCCACATATCCAC+CGG 0.595301 2.3:+30175382 MS.gene77615:CDS
GGGGTGACAACTATTATTGG+AGG 0.595480 2.3:+30175316 MS.gene77615:CDS
AATTTGCAGGGAAGGCCAAA+GGG 0.596112 2.3:+30173259 MS.gene77615:intron
GGAATGAGGAGAGTTGGATG+CGG 0.598775 2.3:-30171764 None:intergenic
CGGGAGAGGAGTAAGAGGAG+TGG 0.599596 2.3:+30171875 MS.gene77615:CDS
CACCTTCGACGCCACCTGCA+CGG 0.601291 2.3:-30171841 None:intergenic
ATTCCATATGATAGTTTGGG+TGG 0.602027 2.3:-30174784 None:intergenic
GGAACTTGACTACCTTGTTG+GGG 0.602846 2.3:+30174268 MS.gene77615:intron
AAGCTGAAAATTGTCTTACA+CGG 0.607490 2.3:-30175482 None:intergenic
TAGAACTCCTCCGTCTGGAA+GGG 0.608774 2.3:-30173507 None:intergenic
ATATTCTGATTATCATCAAG+AGG 0.609805 2.3:-30171984 None:intergenic
GTGACAACTATTATTGGAGG+AGG 0.610339 2.3:+30175319 MS.gene77615:CDS
AAAAGAAAACCAGCAACAGA+TGG 0.611850 2.3:-30173686 None:intergenic
AGTTGGTTCATCCCTTGTAG+AGG 0.617364 2.3:+30174445 MS.gene77615:CDS
GTGGCTTCCCTTCCAGACGG+AGG 0.619373 2.3:+30173500 MS.gene77615:CDS
GGATATGTGGCTCATGACAT+CGG 0.619929 2.3:-30175377 None:intergenic
CAAACTTGCACCACCACCGG+TGG 0.628444 2.3:-30175398 None:intergenic
CCAATCCCATCCAACCATCA+GGG 0.630024 2.3:-30174716 None:intergenic
TGTCACTCCCAAATACAGCT+TGG 0.637672 2.3:+30173282 MS.gene77615:CDS
TCGATGGCGAAGAAAAGTGT+GGG 0.641299 2.3:+30171900 MS.gene77615:CDS
GTTGACATCCTTCTTCTCGG+TGG 0.644584 2.3:+30174383 MS.gene77615:CDS
GGCTTGATACTGCCCCAACA+AGG 0.645353 2.3:-30174280 None:intergenic
CTGCAGCGAAGCCAAGTCGG+CGG 0.647239 2.3:-30171803 None:intergenic
TAACTTATCTTCCTCTACAA+GGG 0.648032 2.3:-30174456 None:intergenic
TTGGTGGCTTCCCTTCCAGA+CGG 0.648069 2.3:+30173497 MS.gene77615:CDS
TGGCCGACCTAAGTGGAAAG+GGG 0.648721 2.3:+30175296 MS.gene77615:CDS
AGGGCCCATGCATCAACAGA+GGG 0.656285 2.3:+30173644 MS.gene77615:CDS
GGCCGACCTAAGTGGAAAGG+GGG 0.657571 2.3:+30175297 MS.gene77615:CDS
TGTGGGAGATTTGAGTGGTG+CGG 0.665857 2.3:+30171917 MS.gene77615:CDS
TAATAGTTGGAATAGCAGCA+CGG 0.665962 2.3:-30172025 None:intergenic
CCAATGAGTTCAGAGAGCCT+GGG 0.679856 2.3:-30173316 None:intergenic
GTCGATGGCGAAGAAAAGTG+TGG 0.682008 2.3:+30171899 MS.gene77615:CDS
CAGGGCCCATGCATCAACAG+AGG 0.685126 2.3:+30173643 MS.gene77615:CDS
ATGAGCCACATATCCACCGG+TGG 0.700239 2.3:+30175385 MS.gene77615:CDS
AAAAGTGTGGGAGATTTGAG+TGG 0.703173 2.3:+30171912 MS.gene77615:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGATAATTAATTAATTG+AGG - chr2.3:30174137-30174156 None:intergenic 10.0%
!! AATTCAATTTAAGAAAATTA+AGG + chr2.3:30172280-30172299 MS.gene77615:intron 10.0%
!! ATTAAATATCTAATTCAAAA+TGG + chr2.3:30172044-30172063 MS.gene77615:CDS 10.0%
!! AAAAATAGAATATGTAGTAA+CGG - chr2.3:30175210-30175229 None:intergenic 15.0%
!! TCTATAATTATATCATTATC+TGG + chr2.3:30172936-30172955 MS.gene77615:intron 15.0%
!! TGAATTAGATATTTAATAGT+TGG - chr2.3:30172041-30172060 None:intergenic 15.0%
!! TTAATATTTATATCAAGAGT+AGG - chr2.3:30173153-30173172 None:intergenic 15.0%
!!! AAAAGTATTGTTTTGAAATT+GGG + chr2.3:30175164-30175183 MS.gene77615:intron 15.0%
!!! AGTAAAAATTAGATATTTTG+AGG + chr2.3:30172544-30172563 MS.gene77615:intron 15.0%
!!! GTTATTAATTTGTTTATTAC+CGG + chr2.3:30172355-30172374 MS.gene77615:intron 15.0%
!! AATTGTAAAAGAAAATAGTG+AGG - chr2.3:30173995-30174014 None:intergenic 20.0%
!! ATATAGGTTAATGATTATTG+AGG + chr2.3:30173354-30173373 MS.gene77615:intron 20.0%
!! CAAATATAACAAATCATAGA+TGG - chr2.3:30172324-30172343 None:intergenic 20.0%
!! GAAAATGTAAATTATGTAAC+CGG - chr2.3:30175246-30175265 None:intergenic 20.0%
!! GTAAAATAAGTAATATCAAC+CGG - chr2.3:30172377-30172396 None:intergenic 20.0%
!! GTGTAATTATTAGATATACA+TGG - chr2.3:30174223-30174242 None:intergenic 20.0%
!! TAATTATATCATTATCTGGT+AGG + chr2.3:30172940-30172959 MS.gene77615:intron 20.0%
!! TTCATACTTTAGTTATAATG+TGG + chr2.3:30172135-30172154 MS.gene77615:intron 20.0%
!!! AAAATGTTTTGAATTTGAGT+TGG + chr2.3:30172578-30172597 MS.gene77615:intron 20.0%
!!! AAATGTTTTGAATTTGAGTT+GGG + chr2.3:30172579-30172598 MS.gene77615:intron 20.0%
!!! AATTTGAAGAAAAGTACAAT+AGG + chr2.3:30172609-30172628 MS.gene77615:intron 20.0%
!!! ATTCTTACTCATAAAGTATT+TGG + chr2.3:30172752-30172771 MS.gene77615:intron 20.0%
!!! CAAAAGTATTGTTTTGAAAT+TGG + chr2.3:30175163-30175182 MS.gene77615:intron 20.0%
!!! TAATTGAAAATGTTTTCAGA+AGG + chr2.3:30174165-30174184 MS.gene77615:intron 20.0%
!!! TAGATAGTTTGCATAAAATT+TGG - chr2.3:30173764-30173783 None:intergenic 20.0%
!!! TATGCAAACTATCTAAAATA+AGG + chr2.3:30173769-30173788 MS.gene77615:intron 20.0%
!!! TTCTTACTCATAAAGTATTT+GGG + chr2.3:30172753-30172772 MS.gene77615:intron 20.0%
!!! TTGAATGTTTTAATAGAATC+TGG - chr2.3:30174750-30174769 None:intergenic 20.0%
! AATAATCCAAATGCAAGAAA+AGG - chr2.3:30173430-30173449 None:intergenic 25.0%
! ACCTTAGATTGTAATGTTAA+GGG + chr2.3:30172808-30172827 MS.gene77615:intron 25.0%
! AGAATATTACTGATGATACT+AGG + chr2.3:30172000-30172019 MS.gene77615:CDS 25.0%
! ATAATCCAAATGCAAGAAAA+GGG - chr2.3:30173429-30173448 None:intergenic 25.0%
! ATATTCTGATTATCATCAAG+AGG - chr2.3:30171987-30172006 None:intergenic 25.0%
! ATCTTTATAACAATGCATGT+TGG + chr2.3:30172894-30172913 MS.gene77615:intron 25.0%
! ATTATGAAGATGATGAAGTT+TGG + chr2.3:30172689-30172708 MS.gene77615:intron 25.0%
! CCAACAAAAAATATGACAAA+AGG - chr2.3:30173004-30173023 None:intergenic 25.0%
! CTTCTACTAAATAACATCAA+TGG + chr2.3:30173733-30173752 MS.gene77615:intron 25.0%
! GAATTGAGGTATGTTTATAT+AGG + chr2.3:30173338-30173357 MS.gene77615:intron 25.0%
! GTTAATGATTATTGAGGAAT+GGG + chr2.3:30173360-30173379 MS.gene77615:intron 25.0%
! TAAAACATTCAATGAAGCAT+TGG + chr2.3:30174758-30174777 MS.gene77615:CDS 25.0%
! TCTGATTTCCATTAACATAT+CGG - chr2.3:30172502-30172521 None:intergenic 25.0%
! TGAAAATGTAATTACAGAGT+TGG - chr2.3:30173103-30173122 None:intergenic 25.0%
! TGGATACTCTTATAAATATG+TGG + chr2.3:30174942-30174961 MS.gene77615:intron 25.0%
! TTAAATATGTATAAACGCTG+TGG + chr2.3:30173198-30173217 MS.gene77615:intron 25.0%
! TTGAGGAAAATAATTGTGAT+AGG - chr2.3:30174120-30174139 None:intergenic 25.0%
! TTTGCAATAGACTGAAAAAA+GGG - chr2.3:30175271-30175290 None:intergenic 25.0%
!! AATGATCTTCACATTTTACA+AGG + chr2.3:30174409-30174428 MS.gene77615:CDS 25.0%
!! ACTATCTAAAATAAGGTTTC+TGG + chr2.3:30173776-30173795 MS.gene77615:intron 25.0%
!! CATGCATATTTTCATGTTTT+AGG + chr2.3:30174247-30174266 MS.gene77615:intron 25.0%
!! TTGATGTTATTTAGTAGAAG+AGG - chr2.3:30173733-30173752 None:intergenic 25.0%
!!! AATGTTTTGAATTTGAGTTG+GGG + chr2.3:30172580-30172599 MS.gene77615:intron 25.0%
!!! ATTTGGGTTTTAATTTGAAC+TGG + chr2.3:30172769-30172788 MS.gene77615:intron 25.0%
!!! CCTTTTGTCATATTTTTTGT+TGG + chr2.3:30173001-30173020 MS.gene77615:intron 25.0%
!!! TTCTATTTTTCTACTTTGCA+CGG + chr2.3:30175220-30175239 MS.gene77615:intron 25.0%
AAAGGGTTAATGCAGAATTT+AGG - chr2.3:30174673-30174692 None:intergenic 30.0%
AAGTGAGTTGTTTGCTTTAA+AGG + chr2.3:30172403-30172422 MS.gene77615:intron 30.0%
ACCCTTAACATTACAATCTA+AGG - chr2.3:30172812-30172831 None:intergenic 30.0%
AGAGATGAAAACATGAAACA+CGG - chr2.3:30173928-30173947 None:intergenic 30.0%
AGCATTTAGATGATGAAACA+TGG - chr2.3:30172856-30172875 None:intergenic 30.0%
ATCATCTAAATGCTTTGCTT+TGG + chr2.3:30172862-30172881 MS.gene77615:intron 30.0%
ATGAAACACGGAAAGTAAAT+GGG - chr2.3:30173916-30173935 None:intergenic 30.0%
ATTTATATCAAGAGTAGGCA+TGG - chr2.3:30173148-30173167 None:intergenic 30.0%
CACCTTAGATTGTAATGTTA+AGG + chr2.3:30172807-30172826 MS.gene77615:intron 30.0%
CTGATTTCCATTAACATATC+GGG - chr2.3:30172501-30172520 None:intergenic 30.0%
CTTTGCAATAGACTGAAAAA+AGG - chr2.3:30175272-30175291 None:intergenic 30.0%
GAACCAAACTCTATATATGA+TGG - chr2.3:30174869-30174888 None:intergenic 30.0%
GAACCATCATATATAGAGTT+TGG + chr2.3:30174863-30174882 MS.gene77615:intron 30.0%
GGATTATTGACAGGTTATTA+AGG + chr2.3:30173442-30173461 MS.gene77615:intron 30.0%
GGTTAATGATTATTGAGGAA+TGG + chr2.3:30173359-30173378 MS.gene77615:intron 30.0%
TAACTTATCTTCCTCTACAA+GGG - chr2.3:30174459-30174478 None:intergenic 30.0%
TAATCCAAATGCAAGAAAAG+GGG - chr2.3:30173428-30173447 None:intergenic 30.0%
TCCATTCCATATGATAGTTT+GGG - chr2.3:30174790-30174809 None:intergenic 30.0%
TTATAACAATGCATGTTGGA+TGG + chr2.3:30172898-30172917 MS.gene77615:intron 30.0%
! AGACAAATGAAAACACGTTT+TGG - chr2.3:30174058-30174077 None:intergenic 30.0%
! AGTCATTCTTTCTAGTCATT+TGG + chr2.3:30172073-30172092 MS.gene77615:CDS 30.0%
! ATGTTTTCAGAAGGTAAACA+AGG + chr2.3:30174174-30174193 MS.gene77615:intron 30.0%
! GACTTTTGATGAAATTTGCA+GGG + chr2.3:30173247-30173266 MS.gene77615:intron 30.0%
! TCTAAGGTCTCATCTAAAAT+TGG + chr2.3:30174335-30174354 MS.gene77615:CDS 30.0%
! TGACTTTTGATGAAATTTGC+AGG + chr2.3:30173246-30173265 MS.gene77615:intron 30.0%
!! GTTTAATTTGTATGCACTGA+CGG + chr2.3:30172195-30172214 MS.gene77615:intron 30.0%
!! TATAAGAGTATCCATCACTA+TGG - chr2.3:30174936-30174955 None:intergenic 30.0%
!!! ATTTTTTGTTGGTGAAGTGA+AGG + chr2.3:30173012-30173031 MS.gene77615:intron 30.0%
AAAAGAAAACCAGCAACAGA+TGG - chr2.3:30173689-30173708 None:intergenic 35.0%
AAAGTTGACATCCTTCTTCT+CGG + chr2.3:30174380-30174399 MS.gene77615:CDS 35.0%
AACACTAATTGCTAAAGCCA+AGG + chr2.3:30174490-30174509 MS.gene77615:CDS 35.0%
AAGATGATGAAGTTTGGAGA+TGG + chr2.3:30172695-30172714 MS.gene77615:intron 35.0%
ACCCAAACTATCATATGGAA+TGG + chr2.3:30174786-30174805 MS.gene77615:CDS 35.0%
AGTAGCTTAGAAAACAAACC+TGG - chr2.3:30174586-30174605 None:intergenic 35.0%
ATACCACCCAAACTATCATA+TGG + chr2.3:30174781-30174800 MS.gene77615:CDS 35.0%
ATCATATGGAATGGACCAAT+GGG + chr2.3:30174795-30174814 MS.gene77615:CDS 35.0%
ATCTAAATGCTTTGCTTTGG+AGG + chr2.3:30172865-30172884 MS.gene77615:intron 35.0%
ATTCCATATGATAGTTTGGG+TGG - chr2.3:30174787-30174806 None:intergenic 35.0%
CAAATGTGAATCATTCTCCA+GGG + chr2.3:30173879-30173898 MS.gene77615:intron 35.0%
CATGAAACACGGAAAGTAAA+TGG - chr2.3:30173917-30173936 None:intergenic 35.0%
CTAACTTATCTTCCTCTACA+AGG - chr2.3:30174460-30174479 None:intergenic 35.0%
CTGTATGTGAATGATGCATT+CGG + chr2.3:30173611-30173630 MS.gene77615:CDS 35.0%
CTTAACATATCTCGCTTGAA+TGG + chr2.3:30172646-30172665 MS.gene77615:intron 35.0%
CTTGCATTTGGATTATTGAC+AGG + chr2.3:30173433-30173452 MS.gene77615:intron 35.0%
GCAGTAAAAACAGAAAGTAG+TGG - chr2.3:30173811-30173830 None:intergenic 35.0%
GTCCATTCCATATGATAGTT+TGG - chr2.3:30174791-30174810 None:intergenic 35.0%
TAATAGTTGGAATAGCAGCA+CGG - chr2.3:30172028-30172047 None:intergenic 35.0%
TAATTGTGATAGGCTGAAGA+CGG - chr2.3:30174110-30174129 None:intergenic 35.0%
TATCATATGGAATGGACCAA+TGG + chr2.3:30174794-30174813 MS.gene77615:CDS 35.0%
TCAAATGTGAATCATTCTCC+AGG + chr2.3:30173878-30173897 MS.gene77615:intron 35.0%
TCAGTCTATTGCAAAGAAGT+TGG + chr2.3:30175276-30175295 MS.gene77615:intron 35.0%
TTCTACTTCTCGAAAATGTG+AGG + chr2.3:30173525-30173544 MS.gene77615:CDS 35.0%
TTTCCATTAACATATCGGGA+AGG - chr2.3:30172497-30172516 None:intergenic 35.0%
TTTCCTTCCCGATATGTTAA+TGG + chr2.3:30172491-30172510 MS.gene77615:intron 35.0%
TTTGATGAAATTTGCAGGGA+AGG + chr2.3:30173251-30173270 MS.gene77615:intron 35.0%
! AAATGTGAGGTTTTACAAGG+AGG + chr2.3:30173538-30173557 MS.gene77615:CDS 35.0%
! CGAAAATGTGAGGTTTTACA+AGG + chr2.3:30173535-30173554 MS.gene77615:CDS 35.0%
! GGTTTTCTTTTGCAAAAGGT+TGG + chr2.3:30173698-30173717 MS.gene77615:intron 35.0%
! TTCACATTTTACAAGGCACA+AGG + chr2.3:30174416-30174435 MS.gene77615:CDS 35.0%
! TTTTACAAAGACATCCAACG+AGG - chr2.3:30172237-30172256 None:intergenic 35.0%
!!! TGCTGGTTTTCTTTTGCAAA+AGG + chr2.3:30173694-30173713 MS.gene77615:CDS 35.0%
AAGGGGGTGACAACTATTAT+TGG + chr2.3:30175313-30175332 MS.gene77615:CDS 40.0%
AATTGCTAAAGCCAAGGCAA+AGG + chr2.3:30174496-30174515 MS.gene77615:CDS 40.0%
AGGAACTTGACTACCTTGTT+GGG + chr2.3:30174267-30174286 MS.gene77615:intron 40.0%
ATCGGGAAGGAAAAAAGAAG+AGG - chr2.3:30172484-30172503 None:intergenic 40.0%
ATGATGAAGTTTGGAGATGG+AGG + chr2.3:30172698-30172717 MS.gene77615:intron 40.0%
ATTAAGGCCGAAGACAGTAT+TGG + chr2.3:30173458-30173477 MS.gene77615:CDS 40.0%
ATTGCTAAAGCCAAGGCAAA+GGG + chr2.3:30174497-30174516 MS.gene77615:CDS 40.0%
ATTTCTCCACTCCATAGTGA+TGG + chr2.3:30174922-30174941 MS.gene77615:intron 40.0%
CATGTGTTTATGTCAGACAC+CGG - chr2.3:30175017-30175036 None:intergenic 40.0%
CTCTGAACTCATTGGAATTG+AGG + chr2.3:30173324-30173343 MS.gene77615:CDS 40.0%
GAATCTGAGTAACTCATGCA+TGG + chr2.3:30172430-30172449 MS.gene77615:intron 40.0%
GTGACAACTATTATTGGAGG+AGG + chr2.3:30175319-30175338 MS.gene77615:CDS 40.0%
TAGGAACTTGACTACCTTGT+TGG + chr2.3:30174266-30174285 MS.gene77615:intron 40.0%
TCAAACTCAAACACTCCCAT+TGG - chr2.3:30174813-30174832 None:intergenic 40.0%
TCATTCTCCAGGGAAAACTT+AGG + chr2.3:30173889-30173908 MS.gene77615:intron 40.0%
TCCAGAAGTAGAAAAGTTGG+TGG + chr2.3:30173481-30173500 MS.gene77615:CDS 40.0%
TGGTCCAGAAGTAGAAAAGT+TGG + chr2.3:30173478-30173497 MS.gene77615:CDS 40.0%
TTCTGGACCAATACTGTCTT+CGG - chr2.3:30173468-30173487 None:intergenic 40.0%
! AAAAGTGTGGGAGATTTGAG+TGG + chr2.3:30171912-30171931 MS.gene77615:CDS 40.0%
! ATTGCAGCAAATGGCCTTTT+TGG - chr2.3:30174305-30174324 None:intergenic 40.0%
! ATTTTTCTACTTTGCACGGC+CGG + chr2.3:30175224-30175243 MS.gene77615:intron 40.0%
! CATTCCCCTTTTCTTGCATT+TGG + chr2.3:30173421-30173440 MS.gene77615:intron 40.0%
! TATTTGAAGCCATCTGTTGC+TGG + chr2.3:30173677-30173696 MS.gene77615:CDS 40.0%
! TTGCAGCAAATGGCCTTTTT+GGG - chr2.3:30174304-30174323 None:intergenic 40.0%
!! AGGAATGGGTTGAAACATGT+TGG + chr2.3:30173374-30173393 MS.gene77615:intron 40.0%
!! AGGAGTTGGTGTTCCTAAAA+GGG + chr2.3:30175100-30175119 MS.gene77615:intron 40.0%
!! CTTTTGATTGAAGACACGTC+CGG + chr2.3:30174987-30175006 MS.gene77615:intron 40.0%
!! GAGTTTGACAAGTTTGCTGT+TGG + chr2.3:30174825-30174844 MS.gene77615:CDS 40.0%
!! TAAATGCTTTGCTTTGGAGG+AGG + chr2.3:30172868-30172887 MS.gene77615:intron 40.0%
!! TAGGAGTTGGTGTTCCTAAA+AGG + chr2.3:30175099-30175118 MS.gene77615:intron 40.0%
!!! GCAAGCTTTTTTGCATGTTC+AGG - chr2.3:30173578-30173597 None:intergenic 40.0%
AAACCTGGCTGTTTGCATCA+GGG - chr2.3:30174571-30174590 None:intergenic 45.0%
AAATTTGCAGGGAAGGCCAA+AGG + chr2.3:30173258-30173277 MS.gene77615:intron 45.0%
AATTTGCAGGGAAGGCCAAA+GGG + chr2.3:30173259-30173278 MS.gene77615:intron 45.0%
ATCCAACTCTCCTCATTCCT+CGG + chr2.3:30171768-30171787 MS.gene77615:CDS 45.0%
GAGTATCCATCACTATGGAG+TGG - chr2.3:30174931-30174950 None:intergenic 45.0%
GGAACTTGACTACCTTGTTG+GGG + chr2.3:30174268-30174287 MS.gene77615:intron 45.0%
GGATATGTGGCTCATGACAT+CGG - chr2.3:30175380-30175399 None:intergenic 45.0%
GGGAAGGAAAAAAGAAGAGG+TGG - chr2.3:30172481-30172500 None:intergenic 45.0%
GGGGTGACAACTATTATTGG+AGG + chr2.3:30175316-30175335 MS.gene77615:CDS 45.0%
TATTTGGGAGTGACACCCTT+TGG - chr2.3:30173277-30173296 None:intergenic 45.0%
TCTGCAATCACCACATCACT+TGG - chr2.3:30174539-30174558 None:intergenic 45.0%
TGCGGAGTTAAAGGGAAAGA+AGG + chr2.3:30171935-30171954 MS.gene77615:CDS 45.0%
TGTCACTCCCAAATACAGCT+TGG + chr2.3:30173282-30173301 MS.gene77615:CDS 45.0%
TTGAGTGGTGCGGAGTTAAA+GGG + chr2.3:30171927-30171946 MS.gene77615:CDS 45.0%
TTTGAGTGGTGCGGAGTTAA+AGG + chr2.3:30171926-30171945 MS.gene77615:CDS 45.0%
! AAGGCCATTTGCTGCAATTG+TGG + chr2.3:30174307-30174326 MS.gene77615:CDS 45.0%
! AATGGGACCTAAGTTTTCCC+TGG - chr2.3:30173899-30173918 None:intergenic 45.0%
! AGGCCATTTGCTGCAATTGT+GGG + chr2.3:30174308-30174327 MS.gene77615:CDS 45.0%
! AGTTGGTTCATCCCTTGTAG+AGG + chr2.3:30174445-30174464 MS.gene77615:CDS 45.0%
! GCAAGATGTACGTCCCTTTT+AGG - chr2.3:30175116-30175135 None:intergenic 45.0%
! GCAAGTTTGGAGCTATTGGA+AGG + chr2.3:30175412-30175431 MS.gene77615:CDS 45.0%
! GCCACCAACTTTTCTACTTC+TGG - chr2.3:30173485-30173504 None:intergenic 45.0%
! TCGATGGCGAAGAAAAGTGT+GGG + chr2.3:30171900-30171919 MS.gene77615:CDS 45.0%
! TGCAATTGTGGGTGGTTCTA+AGG + chr2.3:30174319-30174338 MS.gene77615:CDS 45.0%
! TGGTGCAAGTTTGGAGCTAT+TGG + chr2.3:30175408-30175427 MS.gene77615:CDS 45.0%
! TTTGATTCGAGTGTCCTCGT+TGG + chr2.3:30172220-30172239 MS.gene77615:intron 45.0%
!! AAGAGGTGCCAAGCTGTATT+TGG - chr2.3:30173293-30173312 None:intergenic 45.0%
!! AGAGGTGCCAAGCTGTATTT+GGG - chr2.3:30173292-30173311 None:intergenic 45.0%
!! CAAGTTTGCTGTTGGAACAG+AGG + chr2.3:30174833-30174852 MS.gene77615:CDS 45.0%
AACCTGGCTGTTTGCATCAG+GGG - chr2.3:30174570-30174589 None:intergenic 50.0%
AAGAAGTTGGCCGACCTAAG+TGG + chr2.3:30175289-30175308 MS.gene77615:CDS 50.0%
AAGGCACAAGGTCTTGCAGT+TGG + chr2.3:30174428-30174447 MS.gene77615:CDS 50.0%
ACTCTTGCTGCCAAGTGATG+TGG + chr2.3:30174526-30174545 MS.gene77615:CDS 50.0%
AGAAGTAGAACTCCTCCGTC+TGG - chr2.3:30173515-30173534 None:intergenic 50.0%
AGATGCTGGCACGATCTGAA+AGG - chr2.3:30174691-30174710 None:intergenic 50.0%
AGGAGATTCTGTTGCAGCTG+TGG + chr2.3:30175339-30175358 MS.gene77615:CDS 50.0%
ATGCATTCGGTACTGCTCAC+AGG + chr2.3:30173624-30173643 MS.gene77615:CDS 50.0%
CAAACCTGGCTGTTTGCATC+AGG - chr2.3:30174572-30174591 None:intergenic 50.0%
CACATACAGATCTGCGAGTG+CGG - chr2.3:30173600-30173619 None:intergenic 50.0%
CCAACTCCTACTCGATGAAG+CGG - chr2.3:30175089-30175108 None:intergenic 50.0%
CCAATCCCATCCAACCATCA+GGG - chr2.3:30174719-30174738 None:intergenic 50.0%
CCAATGAGTTCAGAGAGCCT+GGG - chr2.3:30173319-30173338 None:intergenic 50.0%
CCACCCACAATTGCAGCAAA+TGG - chr2.3:30174314-30174333 None:intergenic 50.0%
GAATGAGGAGAGTTGGATGC+GGG - chr2.3:30171766-30171785 None:intergenic 50.0%
GACTCCCTCTGTTGATGCAT+GGG - chr2.3:30173651-30173670 None:intergenic 50.0%
GACTGGTGTGGCTTCATCAA+GGG - chr2.3:30175461-30175480 None:intergenic 50.0%
GATGCTGGCACGATCTGAAA+GGG - chr2.3:30174690-30174709 None:intergenic 50.0%
GCTGAAGACGGAAGACAAGT+TGG - chr2.3:30174098-30174117 None:intergenic 50.0%
GGAATGAGGAGAGTTGGATG+CGG - chr2.3:30171767-30171786 None:intergenic 50.0%
GGATGGGGAAGAGGATTTAG+TGG - chr2.3:30171727-30171746 None:intergenic 50.0%
GGGAAGAGGATTTAGTGGTG+GGG - chr2.3:30171722-30171741 None:intergenic 50.0%
GGGCAGTATCAAGCCCAAAA+AGG + chr2.3:30174288-30174307 MS.gene77615:CDS 50.0%
GGGGAAGAGGATTTAGTGGT+GGG - chr2.3:30171723-30171742 None:intergenic 50.0%
GGTGACACAGTCACGAACAT+CGG - chr2.3:30175068-30175087 None:intergenic 50.0%
GGTTGGATGGGATTGGACAT+TGG + chr2.3:30174723-30174742 MS.gene77615:CDS 50.0%
GTCATGAGCCACATATCCAC+CGG + chr2.3:30175382-30175401 MS.gene77615:CDS 50.0%
GTCGATGGCGAAGAAAAGTG+TGG + chr2.3:30171899-30171918 MS.gene77615:CDS 50.0%
GTTGACATCCTTCTTCTCGG+TGG + chr2.3:30174383-30174402 MS.gene77615:CDS 50.0%
GTTGCAGCTGTGGAGAAAGT+AGG + chr2.3:30175349-30175368 MS.gene77615:CDS 50.0%
TAGAACTCCTCCGTCTGGAA+GGG - chr2.3:30173510-30173529 None:intergenic 50.0%
TATGTCAGACACCGGATGTC+CGG - chr2.3:30175009-30175028 None:intergenic 50.0%
TCATTCCTCCACCGAGAAGA+AGG - chr2.3:30174394-30174413 None:intergenic 50.0%
TCCAATCCCATCCAACCATC+AGG - chr2.3:30174720-30174739 None:intergenic 50.0%
TCCAATGAGTTCAGAGAGCC+TGG - chr2.3:30173320-30173339 None:intergenic 50.0%
TCGAAGGTGAGGACAGTAAG+CGG + chr2.3:30171855-30171874 MS.gene77615:CDS 50.0%
TGACTCCCTCTGTTGATGCA+TGG - chr2.3:30173652-30173671 None:intergenic 50.0%
TGCATTCGGTACTGCTCACA+GGG + chr2.3:30173625-30173644 MS.gene77615:CDS 50.0%
TGGGGAAGAGGATTTAGTGG+TGG - chr2.3:30171724-30171743 None:intergenic 50.0%
TGTGGGAGATTTGAGTGGTG+CGG + chr2.3:30171917-30171936 MS.gene77615:CDS 50.0%
TTGGAAGGCAAAGAGCTTCC+AGG + chr2.3:30175427-30175446 MS.gene77615:CDS 50.0%
TTGGCCGACCTAAGTGGAAA+GGG + chr2.3:30175295-30175314 MS.gene77615:CDS 50.0%
TTGTCACCCCCTTTCCACTT+AGG - chr2.3:30175306-30175325 None:intergenic 50.0%
! AAGAGGATTTAGTGGTGGGG+AGG - chr2.3:30171719-30171738 None:intergenic 50.0%
! AGTAAGAGGAGTGGTGTCGA+TGG + chr2.3:30171884-30171903 MS.gene77615:CDS 50.0%
! CCATTTGCTGCAATTGTGGG+TGG + chr2.3:30174311-30174330 MS.gene77615:CDS 50.0%
AGGGCCCATGCATCAACAGA+GGG + chr2.3:30173644-30173663 MS.gene77615:CDS 55.0%
ATGAGCCACATATCCACCGG+TGG + chr2.3:30175385-30175404 MS.gene77615:CDS 55.0%
CACCCCCTTTCCACTTAGGT+CGG - chr2.3:30175302-30175321 None:intergenic 55.0%
CATCTGCCATCCCTGATGGT+TGG + chr2.3:30174706-30174725 MS.gene77615:CDS 55.0%
CCCAGGCTCTCTGAACTCAT+TGG + chr2.3:30173316-30173335 MS.gene77615:CDS 55.0%
CCCTGATGGTTGGATGGGAT+TGG + chr2.3:30174716-30174735 MS.gene77615:CDS 55.0%
CCGCTTCATCGAGTAGGAGT+TGG + chr2.3:30175086-30175105 MS.gene77615:intron 55.0%
CGAAGGTGAGGACAGTAAGC+GGG + chr2.3:30171856-30171875 MS.gene77615:CDS 55.0%
CGACTGGTGTGGCTTCATCA+AGG - chr2.3:30175462-30175481 None:intergenic 55.0%
CTCCAAACTTGCACCACCAC+CGG - chr2.3:30175404-30175423 None:intergenic 55.0%
GACATCCTTCTTCTCGGTGG+AGG + chr2.3:30174386-30174405 MS.gene77615:CDS 55.0%
GAGGAGTGAGATGGTTGTGG+GGG - chr2.3:30171700-30171719 None:intergenic 55.0%
GAGTGACACACCCTTTGCCT+TGG - chr2.3:30174510-30174529 None:intergenic 55.0%
GCCATCCCTGATGGTTGGAT+GGG + chr2.3:30174711-30174730 MS.gene77615:CDS 55.0%
GGAGGAGTGAGATGGTTGTG+GGG - chr2.3:30171701-30171720 None:intergenic 55.0%
GGCTTGATACTGCCCCAACA+AGG - chr2.3:30174283-30174302 None:intergenic 55.0%
GGGAGGAGTGAGATGGTTGT+GGG - chr2.3:30171702-30171721 None:intergenic 55.0%
GTAAGCGGGAGAGGAGTAAG+AGG + chr2.3:30171870-30171889 MS.gene77615:CDS 55.0%
GTAGAACTCCTCCGTCTGGA+AGG - chr2.3:30173511-30173530 None:intergenic 55.0%
GTGTCACCGCTTCATCGAGT+AGG + chr2.3:30175080-30175099 MS.gene77615:intron 55.0%
GTTGGCCGACCTAAGTGGAA+AGG + chr2.3:30175294-30175313 MS.gene77615:CDS 55.0%
TCAGAGAGCCTGGGAACAAG+AGG - chr2.3:30173310-30173329 None:intergenic 55.0%
TCCCATCCAACCATCAGGGA+TGG - chr2.3:30174715-30174734 None:intergenic 55.0%
TGAAGACACGTCCGGACATC+CGG + chr2.3:30174995-30175014 MS.gene77615:intron 55.0%
TGCCATCCCTGATGGTTGGA+TGG + chr2.3:30174710-30174729 MS.gene77615:CDS 55.0%
TGGCCGACCTAAGTGGAAAG+GGG + chr2.3:30175296-30175315 MS.gene77615:CDS 55.0%
! TTGGTGGCTTCCCTTCCAGA+CGG + chr2.3:30173497-30173516 MS.gene77615:CDS 55.0%
AGCCACATATCCACCGGTGG+TGG + chr2.3:30175388-30175407 MS.gene77615:CDS 60.0%
AGGAGAGTTGGATGCGGGAG+GGG - chr2.3:30171761-30171780 None:intergenic 60.0%
CAAACTTGCACCACCACCGG+TGG - chr2.3:30175401-30175420 None:intergenic 60.0%
CACCACCACCGGTGGATATG+TGG - chr2.3:30175393-30175412 None:intergenic 60.0%
CAGCTGCAGCGAAGCCAAGT+CGG - chr2.3:30171809-30171828 None:intergenic 60.0%
CAGGGCCCATGCATCAACAG+AGG + chr2.3:30173643-30173662 MS.gene77615:CDS 60.0%
CCACCTGCACGGCCAACAAA+GGG - chr2.3:30171833-30171852 None:intergenic 60.0%
CCAGCATCTGCCATCCCTGA+TGG + chr2.3:30174702-30174721 MS.gene77615:CDS 60.0%
CCATCAGGGATGGCAGATGC+TGG - chr2.3:30174705-30174724 None:intergenic 60.0%
CGCCGAGGAATGAGGAGAGT+TGG - chr2.3:30171773-30171792 None:intergenic 60.0%
CGCTGCAGCTGACCCTTTGT+TGG + chr2.3:30171818-30171837 MS.gene77615:CDS 60.0%
CGGGAGAGGAGTAAGAGGAG+TGG + chr2.3:30171875-30171894 MS.gene77615:CDS 60.0%
GAGGAGAGTTGGATGCGGGA+GGG - chr2.3:30171762-30171781 None:intergenic 60.0%
GCTTGGCACCTCTTGTTCCC+AGG + chr2.3:30173299-30173318 MS.gene77615:CDS 60.0%
GGCCGACCTAAGTGGAAAGG+GGG + chr2.3:30175297-30175316 MS.gene77615:CDS 60.0%
GGGGAGGAGTGAGATGGTTG+TGG - chr2.3:30171703-30171722 None:intergenic 60.0%
GTGAGGACAGTAAGCGGGAG+AGG + chr2.3:30171861-30171880 MS.gene77615:CDS 60.0%
GTGTGGCTTCATCAAGGGCG+AGG - chr2.3:30175456-30175475 None:intergenic 60.0%
TCATCAAGGGCGAGGACACC+TGG - chr2.3:30175448-30175467 None:intergenic 60.0%
TGACCCTTTGTTGGCCGTGC+AGG + chr2.3:30171827-30171846 MS.gene77615:CDS 60.0%
TGAGGAGAGTTGGATGCGGG+AGG - chr2.3:30171763-30171782 None:intergenic 60.0%
! AGTGGTGGGGAGGAGTGAGA+TGG - chr2.3:30171709-30171728 None:intergenic 60.0%
! CACCGGTGGTGGTGCAAGTT+TGG + chr2.3:30175399-30175418 MS.gene77615:CDS 60.0%
AGTTGGATGCGGGAGGGGGA+TGG - chr2.3:30171756-30171775 None:intergenic 65.0%
CACCTTCGACGCCACCTGCA+CGG - chr2.3:30171844-30171863 None:intergenic 65.0%
CCCTTTGTTGGCCGTGCAGG+TGG + chr2.3:30171830-30171849 MS.gene77615:CDS 65.0%
CGAAGCCAAGTCGGCGGAGT+GGG - chr2.3:30171800-30171819 None:intergenic 65.0%
CGCCCCTGATGCAAACAGCC+AGG + chr2.3:30174565-30174584 MS.gene77615:CDS 65.0%
CTGCAGCGAAGCCAAGTCGG+CGG - chr2.3:30171806-30171825 None:intergenic 65.0%
GCCACCTGCACGGCCAACAA+AGG - chr2.3:30171834-30171853 None:intergenic 65.0%
GGAGAGTTGGATGCGGGAGG+GGG - chr2.3:30171760-30171779 None:intergenic 65.0%
GTGGCTTCCCTTCCAGACGG+AGG + chr2.3:30173500-30173519 MS.gene77615:CDS 65.0%
GTTGGATGCGGGAGGGGGAT+GGG - chr2.3:30171755-30171774 None:intergenic 65.0%
TTGGATGCGGGAGGGGGATG+GGG - chr2.3:30171754-30171773 None:intergenic 65.0%
! TGCAGGTGGCGTCGAAGGTG+AGG + chr2.3:30171844-30171863 MS.gene77615:CDS 65.0%
!! AGGGGGATGGGGTGGTGGAT+GGG - chr2.3:30171743-30171762 None:intergenic 65.0%
!! TGGGGTGGTGGATGGGGAAG+AGG - chr2.3:30171736-30171755 None:intergenic 65.0%
AGCCAAGTCGGCGGAGTGGG+CGG - chr2.3:30171797-30171816 None:intergenic 70.0%
GCGAAGCCAAGTCGGCGGAG+TGG - chr2.3:30171801-30171820 None:intergenic 70.0%
!! GAGGGGGATGGGGTGGTGGA+TGG - chr2.3:30171744-30171763 None:intergenic 70.0%
!! GGGGGATGGGGTGGTGGATG+GGG - chr2.3:30171742-30171761 None:intergenic 70.0%
GATGCGGGAGGGGGATGGGG+TGG - chr2.3:30171751-30171770 None:intergenic 75.0%
GCCAAGTCGGCGGAGTGGGC+GGG - chr2.3:30171796-30171815 None:intergenic 75.0%
! GGCCGTGCAGGTGGCGTCGA+AGG + chr2.3:30171839-30171858 MS.gene77615:CDS 75.0%
!! TGGGCGGGCGCCGAGGAATG+AGG - chr2.3:30171781-30171800 None:intergenic 75.0%
! GCGGGAGGGGGATGGGGTGG+TGG - chr2.3:30171748-30171767 None:intergenic 80.0%
!! GCCCGCCCACTCCGCCGACT+TGG + chr2.3:30171792-30171811 MS.gene77615:CDS 80.0%
!! GGCGGAGTGGGCGGGCGCCG+AGG - chr2.3:30171788-30171807 None:intergenic 90.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 30171681 30175489 30171681 ID=MS.gene77615
chr2.3 mRNA 30171681 30175489 30171681 ID=MS.gene77615.t1;Parent=MS.gene77615
chr2.3 exon 30171681 30172094 30171681 ID=MS.gene77615.t1.exon1;Parent=MS.gene77615.t1
chr2.3 CDS 30171681 30172094 30171681 ID=cds.MS.gene77615.t1;Parent=MS.gene77615.t1
chr2.3 exon 30173268 30173345 30173268 ID=MS.gene77615.t1.exon2;Parent=MS.gene77615.t1
chr2.3 CDS 30173268 30173345 30173268 ID=cds.MS.gene77615.t1;Parent=MS.gene77615.t1
chr2.3 exon 30173455 30173715 30173455 ID=MS.gene77615.t1.exon3;Parent=MS.gene77615.t1
chr2.3 CDS 30173455 30173715 30173455 ID=cds.MS.gene77615.t1;Parent=MS.gene77615.t1
chr2.3 exon 30174269 30174586 30174269 ID=MS.gene77615.t1.exon4;Parent=MS.gene77615.t1
chr2.3 CDS 30174269 30174586 30174269 ID=cds.MS.gene77615.t1;Parent=MS.gene77615.t1
chr2.3 exon 30174696 30174854 30174696 ID=MS.gene77615.t1.exon5;Parent=MS.gene77615.t1
chr2.3 CDS 30174696 30174854 30174696 ID=cds.MS.gene77615.t1;Parent=MS.gene77615.t1
chr2.3 exon 30175280 30175489 30175280 ID=MS.gene77615.t1.exon6;Parent=MS.gene77615.t1
chr2.3 CDS 30175280 30175489 30175280 ID=cds.MS.gene77615.t1;Parent=MS.gene77615.t1
Gene Sequence

>MS.gene77615

ATGGCTTCAGCTACAGCCCCCACAACCATCTCACTCCTCCCCACCACTAAATCCTCTTCCCCATCCACCACCCCATCCCCCTCCCGCATCCAACTCTCCTCATTCCTCGGCGCCCGCCCACTCCGCCGACTTGGCTTCGCTGCAGCTGACCCTTTGTTGGCCGTGCAGGTGGCGTCGAAGGTGAGGACAGTAAGCGGGAGAGGAGTAAGAGGAGTGGTGTCGATGGCGAAGAAAAGTGTGGGAGATTTGAGTGGTGCGGAGTTAAAGGGAAAGAAGGTTTTTGTGAGAGCTGACTTGAATGTTCCTCTTGATGATAATCAGAATATTACTGATGATACTAGGATCCGTGCTGCTATTCCAACTATTAAATATCTAATTCAAAATGGTGCTAAAGTCATTCTTTCTAGTCATTTGGTATATATATCTCATTTCTCTCATATTTAATGATCTCTTATTCATACTTTAGTTATAATGTGGAGAATTTGTATGATGAATGTATGAGTAAGAAAATTGAGTTTAATTTGTATGCACTGACGGTATTTGATTCGAGTGTCCTCGTTGGATGTCTTTGTAAAACTATTTTACACTGTCTGTTTACAAATTCAATTTAAGAAAATTAAGGTTTGATTGATATTTTGAACCATCTATGATTTGTTATATTTGTGCATTTCTGTGTTATTAATTTGTTTATTACCGGTTGATATTACTTATTTTACTCTATAAAGTGAGTTGTTTGCTTTAAAGGTGTTGAATCTGAGTAACTCATGCATGGATCGTACGCAAGTTACTCAGATTCACCACCTCTTCTTTTTTCCTTCCCGATATGTTAATGGAAATCAGAATGTTAGTTGAAATTGAAATGCAGTAAAAATTAGATATTTTGAGGTTGTTGAAGAAAAAATGTTTTGAATTTGAGTTGGGGACTGAAAATTTGAAGAAAAGTACAATAGGTGAGTTTAGTAGATCTTAACATATCTCGCTTGAATGGAGAGATAGATGTTGAATAAGATTATGAAGATGATGAAGTTTGGAGATGGAGGCATGAAAAAAAGAGATAGAAACACAACTCAAATTCTTACTCATAAAGTATTTGGGTTTTAATTTGAACTGGAAGTAAGTAAAGATGCACCTTAGATTGTAATGTTAAGGGTTGAATTTTAAATTAAGAGATTCCATGTTTCATCATCTAAATGCTTTGCTTTGGAGGAGGAAAATCTTTATAACAATGCATGTTGGATGGATTCTTTGATCATTGTCTATAATTATATCATTATCTGGTAGGTTTTGCTTTTACAATTACATGATAATGATTTTTTTTTTCCTTTTGTCATATTTTTTGTTGGTGAAGTGAAGGCTTTGAGTCTTTAATTTGAAATGTATTTGTTTGAATTATGTATTTTAAAGAAAAAATATTCTTCTCCAACTCTGTAATTACATTTTCACTTTTTATTTCTGCTCTGTAATCCATGCCTACTCTTGATATAAATATTAATGTAATTTGTCATTGCAAAATCTGATTAAATATGTATAAACGCTGTGGTTTGAACTTGTAAGTTGAATCATTCTGACTTTTGATGAAATTTGCAGGGAAGGCCAAAGGGTGTCACTCCCAAATACAGCTTGGCACCTCTTGTTCCCAGGCTCTCTGAACTCATTGGAATTGAGGTATGTTTATATAGGTTAATGATTATTGAGGAATGGGTTGAAACATGTTGGATGTTTGAAGAGTAATTAAAATATCATTCCCCTTTTCTTGCATTTGGATTATTGACAGGTTATTAAGGCCGAAGACAGTATTGGTCCAGAAGTAGAAAAGTTGGTGGCTTCCCTTCCAGACGGAGGAGTTCTACTTCTCGAAAATGTGAGGTTTTACAAGGAGGAAGAAAAGAATGATCCTGAACATGCAAAAAAGCTTGCCGCACTCGCAGATCTGTATGTGAATGATGCATTCGGTACTGCTCACAGGGCCCATGCATCAACAGAGGGAGTCACTAAATATTTGAAGCCATCTGTTGCTGGTTTTCTTTTGCAAAAGGTTGGTTTATCTCTCCTCTTCTACTAAATAACATCAATGGCTAATCCAAATTTTATGCAAACTATCTAAAATAAGGTTTCTGGACTTCATAACCACTACTTTCTGTTTTTACTGCTTATCTTATAATAAGTTTGATTACTTGACATGAAGTAAAATTTCATGTCAAATGTGAATCATTCTCCAGGGAAAACTTAGGTCCCATTTACTTTCCGTGTTTCATGTTTTCATCTCTACTTCATCTAATAAACACAAGATAAATATTAGATTCACAATTTTCCTCACTATTTTCTTTTACAATTTATGAAAACATATCAAACATTTTCAGAAGTTTTGAAAATACCAAAACGTGTTTTCATTTGTCTTTGAAAATGCATTCTTTCCAACTTGTCTTCCGTCTTCAGCCTATCACAATTATTTTCCTCAATTAATTAATTATCATTTGAAAATGATAATTGAAAATGTTTTCAGAAGGTAAACAAGGTCTTAGTGTTCAAACTTTTAATTCCATGTATATCTAATAATTACACATCACATGCATATTTTCATGTTTTAGGAACTTGACTACCTTGTTGGGGCAGTATCAAGCCCAAAAAGGCCATTTGCTGCAATTGTGGGTGGTTCTAAGGTCTCATCTAAAATTGGAGTGATTGAGTCACTTCTAGAAAAAGTTGACATCCTTCTTCTCGGTGGAGGAATGATCTTCACATTTTACAAGGCACAAGGTCTTGCAGTTGGTTCATCCCTTGTAGAGGAAGATAAGTTAGATCTTGCTACAACACTAATTGCTAAAGCCAAGGCAAAGGGTGTGTCACTCTTGCTGCCAAGTGATGTGGTGATTGCAGACAAATTCGCCCCTGATGCAAACAGCCAGGTTTGTTTTCTAAGCTACTTTAGATTAGCAACAGACATTATAACTATGCATTTTTACTCGTTCATAATTGTTTGCTGCAAGAACCTAAATTCTGCATTAACCCTTTCAGATCGTGCCAGCATCTGCCATCCCTGATGGTTGGATGGGATTGGACATTGGTCCAGATTCTATTAAAACATTCAATGAAGCATTGGATACCACCCAAACTATCATATGGAATGGACCAATGGGAGTGTTTGAGTTTGACAAGTTTGCTGTTGGAACAGAGGTATGCAAGAACCATCATATATAGAGTTTGGTTCATATTATATATTTAAAACATGTTTGCAGTCAAAATTTCTCCACTCCATAGTGATGGATACTCTTATAAATATGTGGTTTGAGTTGCGTAGCATCAATACTTTTGATTGAAGACACGTCCGGACATCCGGTGTCTGACATAAACACATGTTAGTGTGTTTACGTGTCAGTCTCGTGTCCGATGTTCGTGACTGTGTCACCGCTTCATCGAGTAGGAGTTGGTGTTCCTAAAAGGGACGTACATCTTGCGAATTGTATGCTTATGCGTTTACATAACAAAAGTATTGTTTTGAAATTGGGATGATTCAAATGTCAATCTACCGTTACTACATATTCTATTTTTCTACTTTGCACGGCCGGTTACATAATTTACATTTTCTACCCTTTTTTCAGTCTATTGCAAAGAAGTTGGCCGACCTAAGTGGAAAGGGGGTGACAACTATTATTGGAGGAGGAGATTCTGTTGCAGCTGTGGAGAAAGTAGGAGTTGCCGATGTCATGAGCCACATATCCACCGGTGGTGGTGCAAGTTTGGAGCTATTGGAAGGCAAAGAGCTTCCAGGTGTCCTCGCCCTTGATGAAGCCACACCAGTCGCCGTGTAA

Protein sequence

>MS.gene77615.t1

MASATAPTTISLLPTTKSSSPSTTPSPSRIQLSSFLGARPLRRLGFAAADPLLAVQVASKVRTVSGRGVRGVVSMAKKSVGDLSGAELKGKKVFVRADLNVPLDDNQNITDDTRIRAAIPTIKYLIQNGAKVILSSHLGRPKGVTPKYSLAPLVPRLSELIGIEVIKAEDSIGPEVEKLVASLPDGGVLLLENVRFYKEEEKNDPEHAKKLAALADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIFTFYKAQGLAVGSSLVEEDKLDLATTLIAKAKAKGVSLLLPSDVVIADKFAPDANSQIVPASAIPDGWMGLDIGPDSIKTFNEALDTTQTIIWNGPMGVFEFDKFAVGTESIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVADVMSHISTGGGASLELLEGKELPGVLALDEATPVAV