Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039009.t1 | XP_003596091.1 | 99.5 | 405 | 2 | 0 | 1 | 405 | 75 | 479 | 2.90E-220 | 774.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039009.t1 | Q42961 | 91.4 | 406 | 34 | 1 | 1 | 405 | 76 | 481 | 1.8e-207 | 723.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039009.t1 | G7IT85 | 99.5 | 405 | 2 | 0 | 1 | 405 | 75 | 479 | 2.1e-220 | 774.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene77614 | MS.gene039009 | PPI |
| MS.gene038986 | MS.gene039009 | PPI |
| MS.gene77612 | MS.gene039009 | PPI |
| MS.gene77595 | MS.gene039009 | PPI |
| MS.gene74185 | MS.gene039009 | PPI |
| MS.gene92152 | MS.gene039009 | PPI |
| MS.gene039008 | MS.gene039009 | PPI |
| MS.gene77613 | MS.gene039009 | PPI |
| MS.gene74186 | MS.gene039009 | PPI |
| MS.gene039007 | MS.gene039009 | PPI |
| MS.gene066309 | MS.gene039009 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039009.t1 | MTR_2g066110 | 99.506 | 405 | 2 | 0 | 1 | 405 | 75 | 479 | 0.0 | 797 |
| MS.gene039009.t1 | MTR_2g066120 | 88.191 | 398 | 47 | 0 | 3 | 400 | 4 | 401 | 0.0 | 695 |
| MS.gene039009.t1 | MTR_2g066130 | 85.427 | 398 | 58 | 0 | 3 | 400 | 4 | 401 | 0.0 | 680 |
| MS.gene039009.t1 | MTR_1242s0010 | 88.938 | 226 | 25 | 0 | 175 | 400 | 1 | 226 | 6.28e-140 | 398 |
| MS.gene039009.t1 | MTR_1680s0010 | 48.585 | 212 | 102 | 3 | 9 | 218 | 143 | 349 | 1.36e-52 | 180 |
| MS.gene039009.t1 | MTR_6g018680 | 30.198 | 404 | 272 | 5 | 4 | 405 | 83 | 478 | 9.54e-50 | 178 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039009.t1 | AT1G56190 | 89.877 | 405 | 41 | 0 | 1 | 405 | 74 | 478 | 0.0 | 736 |
| MS.gene039009.t1 | AT1G56190 | 89.877 | 405 | 41 | 0 | 1 | 405 | 1 | 405 | 0.0 | 733 |
| MS.gene039009.t1 | AT3G12780 | 89.877 | 405 | 41 | 0 | 1 | 405 | 77 | 481 | 0.0 | 729 |
| MS.gene039009.t1 | AT1G79550 | 85.930 | 398 | 56 | 0 | 3 | 400 | 4 | 401 | 0.0 | 692 |
| MS.gene039009.t1 | AT1G79550 | 85.930 | 398 | 56 | 0 | 3 | 400 | 4 | 401 | 0.0 | 692 |
Find 124 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAGGTGCCAAGCTGTATT+TGG | 0.198091 | 2.4:-27890452 | None:intergenic |
| TTTGAGTGGTGCGGAGTTAA+AGG | 0.229996 | 2.4:+27889004 | MS.gene039009:CDS |
| TCCAAGGTCTCATCTAAAAT+TGG | 0.303839 | 2.4:+27891469 | MS.gene039009:CDS |
| GTCCATTCCATATGATGGTT+TGG | 0.319459 | 2.4:-27891922 | None:intergenic |
| GGATTATTGACAGGTTATTA+AGG | 0.325099 | 2.4:+27890604 | MS.gene039009:intron |
| CACCGGTGGTGGTGCAAGTT+TGG | 0.328292 | 2.4:+27892557 | MS.gene039009:CDS |
| ATTAAATATCTAATTCAAAA+TGG | 0.335122 | 2.4:+27889122 | MS.gene039009:CDS |
| TAGGAACTTGACTACCTTGT+TGG | 0.343922 | 2.4:+27891400 | MS.gene039009:intron |
| AGGAACTTGACTACCTTGTT+GGG | 0.344781 | 2.4:+27891401 | MS.gene039009:intron |
| TCCAATGAGTTCGGAGAGCC+TGG | 0.357814 | 2.4:-27890479 | None:intergenic |
| TGAATTAGATATTTAATAGT+TGG | 0.368159 | 2.4:-27889116 | None:intergenic |
| TCCATTCCATATGATGGTTT+GGG | 0.378519 | 2.4:-27891921 | None:intergenic |
| AGTCATTCTTTCTAGCCATT+TGG | 0.381908 | 2.4:+27889151 | MS.gene039009:CDS |
| TATTTGGGAGTGACACCCTT+TGG | 0.399527 | 2.4:-27890436 | None:intergenic |
| TATTTGAAGCCATCTGTTGC+TGG | 0.401801 | 2.4:+27890839 | MS.gene039009:CDS |
| TCCAATCCCATCCAACCATC+AGG | 0.411142 | 2.4:-27891851 | None:intergenic |
| CATTGGTCCATTCCATATGA+TGG | 0.411281 | 2.4:-27891927 | None:intergenic |
| TTGAGTGGTGCGGAGTTAAA+GGG | 0.422517 | 2.4:+27889005 | MS.gene039009:CDS |
| TGCTATCCCTGATGGTTGGA+TGG | 0.424383 | 2.4:+27891844 | MS.gene039009:CDS |
| TTGGAAGGCAAAGAGCTTCC+CGG | 0.431964 | 2.4:+27892585 | MS.gene039009:CDS |
| AGAGGTGCCAAGCTGTATTT+GGG | 0.433038 | 2.4:-27890451 | None:intergenic |
| AAGGCCATTTGCGGCAATTG+TGG | 0.436409 | 2.4:+27891441 | MS.gene039009:CDS |
| CCACCCACAATTGCCGCAAA+TGG | 0.440518 | 2.4:-27891445 | None:intergenic |
| TTCTGGACCAATACTGTCTT+CGG | 0.442920 | 2.4:-27890627 | None:intergenic |
| GGGCAGTATCAAGCCCAAAA+AGG | 0.443174 | 2.4:+27891422 | MS.gene039009:CDS |
| GACTCCCTCTGTTGATGCAT+GGG | 0.445361 | 2.4:-27890810 | None:intergenic |
| ATGCATTCGGTACTGCTCAC+AGG | 0.450363 | 2.4:+27890786 | MS.gene039009:CDS |
| TGGTGCAAGTTTGGAGCTAT+TGG | 0.450844 | 2.4:+27892566 | MS.gene039009:CDS |
| TTAGTCTATTGCAAAGAAGT+TGG | 0.455163 | 2.4:+27892434 | MS.gene039009:intron |
| AAAGTTGACATCCTTCTTCT+CGG | 0.456222 | 2.4:+27891514 | MS.gene039009:CDS |
| CAAACCTGGCTGTTTGCATC+AGG | 0.463412 | 2.4:-27891703 | None:intergenic |
| CCCAGGCTCTCCGAACTCAT+TGG | 0.464625 | 2.4:+27890478 | MS.gene039009:CDS |
| CCCTGATGGTTGGATGGGAT+TGG | 0.470340 | 2.4:+27891850 | MS.gene039009:CDS |
| AGGCCATTTGCGGCAATTGT+GGG | 0.473545 | 2.4:+27891442 | MS.gene039009:CDS |
| GCTACACCAGTCGCCGTGTA+AGG | 0.475076 | 2.4:+27892627 | MS.gene039009:CDS |
| TAAAACATTCAATGAAGCAT+TGG | 0.477391 | 2.4:+27891892 | MS.gene039009:CDS |
| CCTTGTAGAGGAAGATAAGT+TGG | 0.479283 | 2.4:+27891591 | MS.gene039009:CDS |
| AGAAGTAGAACTCCTCCGTC+TGG | 0.481985 | 2.4:-27890674 | None:intergenic |
| ATACCACCCAAACCATCATA+TGG | 0.484602 | 2.4:+27891915 | MS.gene039009:CDS |
| TGCTCCTGATGCAAACAGCC+AGG | 0.489017 | 2.4:+27891699 | MS.gene039009:CDS |
| GCTTGGCACCTCTTGTTCCC+AGG | 0.490709 | 2.4:+27890461 | MS.gene039009:CDS |
| CCAACTTATCTTCCTCTACA+AGG | 0.492018 | 2.4:-27891591 | None:intergenic |
| TCATTCCTCCACCGAGAAGA+AGG | 0.493393 | 2.4:-27891525 | None:intergenic |
| TACCTCAATTCCAATGAGTT+CGG | 0.493430 | 2.4:-27890488 | None:intergenic |
| GGTTGGATGGGATTGGACAT+TGG | 0.502884 | 2.4:+27891857 | MS.gene039009:CDS |
| TCATCGAGGGCGAGAACACC+GGG | 0.502939 | 2.4:-27892603 | None:intergenic |
| CACCACCACCGGTGGATATG+TGG | 0.503719 | 2.4:-27892548 | None:intergenic |
| GACATCCTTCTTCTCGGTGG+AGG | 0.504587 | 2.4:+27891520 | MS.gene039009:CDS |
| TGACTCCCTCTGTTGATGCA+TGG | 0.505501 | 2.4:-27890811 | None:intergenic |
| AAATTGCCTTACACGGCGAC+TGG | 0.508972 | 2.4:-27892633 | None:intergenic |
| TGCGGAGTTAAAGGGAAAGA+AGG | 0.510243 | 2.4:+27889013 | MS.gene039009:CDS |
| TTGGCCGACCTAAGTGGAAA+GGG | 0.511148 | 2.4:+27892453 | MS.gene039009:CDS |
| ATCATATGGAATGGACCAAT+GGG | 0.515486 | 2.4:+27891929 | MS.gene039009:CDS |
| CTCCGAACTCATTGGAATTG+AGG | 0.516505 | 2.4:+27890486 | MS.gene039009:CDS |
| GGCAATTGTGGGTGGTTCCA+AGG | 0.518184 | 2.4:+27891453 | MS.gene039009:CDS |
| AGGAGATTCTGTTGCAGCTG+TGG | 0.521058 | 2.4:+27892497 | MS.gene039009:CDS |
| GAGTGACACACCCTTTGCCT+TGG | 0.526454 | 2.4:-27891641 | None:intergenic |
| TTCATCGAGGGCGAGAACAC+CGG | 0.526737 | 2.4:-27892604 | None:intergenic |
| CTCCAAACTTGCACCACCAC+CGG | 0.527384 | 2.4:-27892559 | None:intergenic |
| ATTAAGGCCGAAGACAGTAT+TGG | 0.529102 | 2.4:+27890620 | MS.gene039009:CDS |
| CCAGCATCTGCTATCCCTGA+TGG | 0.534495 | 2.4:+27891836 | MS.gene039009:CDS |
| CATCTGCTATCCCTGATGGT+TGG | 0.536047 | 2.4:+27891840 | MS.gene039009:CDS |
| GCTATCCCTGATGGTTGGAT+GGG | 0.536600 | 2.4:+27891845 | MS.gene039009:CDS |
| TCTGCGATCACCACATCACT+TGG | 0.538211 | 2.4:-27891670 | None:intergenic |
| AGAATATTACTGATGATACT+AGG | 0.543997 | 2.4:+27889078 | MS.gene039009:CDS |
| GAGTTTGACAAGTTTGCTGT+TGG | 0.546134 | 2.4:+27891959 | MS.gene039009:CDS |
| GTAGAACTCCTCCGTCTGGA+AGG | 0.546631 | 2.4:-27890670 | None:intergenic |
| ACCCAAACCATCATATGGAA+TGG | 0.549209 | 2.4:+27891920 | MS.gene039009:CDS |
| CCATTTGCGGCAATTGTGGG+TGG | 0.550750 | 2.4:+27891445 | MS.gene039009:CDS |
| CATCATATGGAATGGACCAA+TGG | 0.552065 | 2.4:+27891928 | MS.gene039009:CDS |
| AAGAAGTTGGCCGACCTAAG+TGG | 0.552641 | 2.4:+27892447 | MS.gene039009:CDS |
| GTTGCAGCTGTGGAGAAAGT+AGG | 0.554074 | 2.4:+27892507 | MS.gene039009:CDS |
| TTCTACTTCTTGAAAATGTG+AGG | 0.555785 | 2.4:+27890687 | MS.gene039009:CDS |
| TGGTCCAGAAGTAGAAAAGT+TGG | 0.556192 | 2.4:+27890640 | MS.gene039009:CDS |
| TGCATTCGGTACTGCTCACA+GGG | 0.557008 | 2.4:+27890787 | MS.gene039009:CDS |
| ATTGCAAAAGCCAAGGCAAA+GGG | 0.558692 | 2.4:+27891631 | MS.gene039009:CDS |
| ACTCTTGCTGCCAAGTGATG+TGG | 0.558831 | 2.4:+27891660 | MS.gene039009:CDS |
| AATTGCAAAAGCCAAGGCAA+AGG | 0.559292 | 2.4:+27891630 | MS.gene039009:CDS |
| AAGGCACAAGGTCTTGCAGT+TGG | 0.559506 | 2.4:+27891562 | MS.gene039009:CDS |
| AAGCTGAAAATTGCCTTACA+CGG | 0.560445 | 2.4:-27892640 | None:intergenic |
| AGCCACATATCCACCGGTGG+TGG | 0.561258 | 2.4:+27892546 | MS.gene039009:CDS |
| TCAAACTCAAACACTCCCAT+TGG | 0.562382 | 2.4:-27891944 | None:intergenic |
| CAAGTTTGCTGTTGGAACAG+AGG | 0.563230 | 2.4:+27891967 | MS.gene039009:CDS |
| ATTCCATATGATGGTTTGGG+TGG | 0.577654 | 2.4:-27891918 | None:intergenic |
| AAATTTGCAGGGAAGGCCAA+AGG | 0.578585 | 2.4:+27890420 | MS.gene039009:intron |
| CTGTATGTGAATGATGCATT+CGG | 0.584611 | 2.4:+27890773 | MS.gene039009:CDS |
| TCCAGAAGTAGAAAAGTTGG+TGG | 0.584684 | 2.4:+27890643 | MS.gene039009:CDS |
| GTTGGCCGACCTAAGTGGAA+AGG | 0.587208 | 2.4:+27892452 | MS.gene039009:CDS |
| CACATACAGATCTGCGAGTG+CGG | 0.592722 | 2.4:-27890759 | None:intergenic |
| GCAAGTTTGGAGCTATTGGA+AGG | 0.593757 | 2.4:+27892570 | MS.gene039009:CDS |
| CCATCAGGGATAGCAGATGC+TGG | 0.593790 | 2.4:-27891836 | None:intergenic |
| GTCATGAGCCACATATCCAC+CGG | 0.595301 | 2.4:+27892540 | MS.gene039009:CDS |
| GGGGTGACAACTATTATTGG+AGG | 0.595480 | 2.4:+27892474 | MS.gene039009:CDS |
| AATTTGCAGGGAAGGCCAAA+GGG | 0.596112 | 2.4:+27890421 | MS.gene039009:intron |
| GGAACTTGACTACCTTGTTG+GGG | 0.602846 | 2.4:+27891402 | MS.gene039009:intron |
| TAGAACTCCTCCGTCTGGAA+GGG | 0.608774 | 2.4:-27890669 | None:intergenic |
| ATATTCTGATTATCATCAAG+AGG | 0.609805 | 2.4:-27889062 | None:intergenic |
| GTGACAACTATTATTGGAGG+AGG | 0.610339 | 2.4:+27892477 | MS.gene039009:CDS |
| AAAAGAAAACCAGCAACAGA+TGG | 0.611850 | 2.4:-27890848 | None:intergenic |
| TCGGAGAGCCTGGGAACAAG+AGG | 0.613075 | 2.4:-27890469 | None:intergenic |
| GACTGGTGTAGCTTCATCGA+GGG | 0.615596 | 2.4:-27892616 | None:intergenic |
| AGTTGGTTCATCCCTTGTAG+AGG | 0.617364 | 2.4:+27891579 | MS.gene039009:CDS |
| AACACTAATTGCAAAAGCCA+AGG | 0.618211 | 2.4:+27891624 | MS.gene039009:CDS |
| GTGGCTTCCCTTCCAGACGG+AGG | 0.619373 | 2.4:+27890662 | MS.gene039009:CDS |
| GGATATGTGGCTCATGACAT+CGG | 0.619929 | 2.4:-27892535 | None:intergenic |
| CAAACTTGCACCACCACCGG+TGG | 0.628444 | 2.4:-27892556 | None:intergenic |
| CCAATCCCATCCAACCATCA+GGG | 0.630942 | 2.4:-27891850 | None:intergenic |
| TGTCACTCCCAAATACAGCT+TGG | 0.637672 | 2.4:+27890444 | MS.gene039009:CDS |
| TCGATGGCGAAGAAAAGTGT+GGG | 0.641299 | 2.4:+27888978 | None:intergenic |
| CAACTTATCTTCCTCTACAA+GGG | 0.642305 | 2.4:-27891590 | None:intergenic |
| GTTGACATCCTTCTTCTCGG+TGG | 0.644584 | 2.4:+27891517 | MS.gene039009:CDS |
| GGCTTGATACTGCCCCAACA+AGG | 0.645353 | 2.4:-27891414 | None:intergenic |
| CCAATGAGTTCGGAGAGCCT+GGG | 0.647952 | 2.4:-27890478 | None:intergenic |
| TTGGTGGCTTCCCTTCCAGA+CGG | 0.648069 | 2.4:+27890659 | MS.gene039009:CDS |
| TGGCCGACCTAAGTGGAAAG+GGG | 0.648721 | 2.4:+27892454 | MS.gene039009:CDS |
| AGGGCCCATGCATCAACAGA+GGG | 0.656285 | 2.4:+27890806 | MS.gene039009:CDS |
| GGCCGACCTAAGTGGAAAGG+GGG | 0.657571 | 2.4:+27892455 | MS.gene039009:CDS |
| TGTGGGAGATTTGAGTGGTG+CGG | 0.665857 | 2.4:+27888995 | MS.gene039009:CDS |
| TAATAGTTGGAATAGCAGCA+CGG | 0.665962 | 2.4:-27889103 | None:intergenic |
| GTCGATGGCGAAGAAAAGTG+TGG | 0.682008 | 2.4:+27888977 | None:intergenic |
| CGACTGGTGTAGCTTCATCG+AGG | 0.684327 | 2.4:-27892617 | None:intergenic |
| CAGGGCCCATGCATCAACAG+AGG | 0.685126 | 2.4:+27890805 | MS.gene039009:CDS |
| ATGAGCCACATATCCACCGG+TGG | 0.700239 | 2.4:+27892543 | MS.gene039009:CDS |
| AAAAGTGTGGGAGATTTGAG+TGG | 0.703173 | 2.4:+27888990 | MS.gene039009:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGATAATTAATTAATTG+AGG | - | chr2.4:27891271-27891290 | None:intergenic | 10.0% |
| !! | ATTAAATATCTAATTCAAAA+TGG | + | chr2.4:27889122-27889141 | MS.gene039009:CDS | 10.0% |
| !!! | ATATTTTTTCTTTAAAATAC+AGG | - | chr2.4:27890236-27890255 | None:intergenic | 10.0% |
| !! | TGAATTAGATATTTAATAGT+TGG | - | chr2.4:27889119-27889138 | None:intergenic | 15.0% |
| !! | TTTATTAGATGAAAGTAAAT+GGG | - | chr2.4:27891078-27891097 | None:intergenic | 15.0% |
| !!! | AGTAAAAATTAGATATTTTG+AGG | + | chr2.4:27889640-27889659 | MS.gene039009:intron | 15.0% |
| !!! | ATTACTTATTTTACTCTATA+AGG | + | chr2.4:27889457-27889476 | MS.gene039009:intron | 15.0% |
| !!! | TTCATACTAATAAAGTATTT+GGG | + | chr2.4:27889860-27889879 | MS.gene039009:intron | 15.0% |
| !!! | TTCATATTTTAGTTATAATG+TGG | + | chr2.4:27889213-27889232 | MS.gene039009:intron | 15.0% |
| !! | AATGAGATATATATACCAAA+TGG | - | chr2.4:27889169-27889188 | None:intergenic | 20.0% |
| !! | AATTGTAAAAGAAAATAGTG+AGG | - | chr2.4:27891130-27891149 | None:intergenic | 20.0% |
| !! | AATTTGAAGAAAAGTAGAAT+AGG | + | chr2.4:27889706-27889725 | MS.gene039009:intron | 20.0% |
| !! | ATATAGGTTAATGATTATTG+AGG | + | chr2.4:27890516-27890535 | MS.gene039009:intron | 20.0% |
| !! | GTTTATTAGATGAAAGTAAA+TGG | - | chr2.4:27891079-27891098 | None:intergenic | 20.0% |
| !! | TATAAGATAAGCAGTAAAAA+CGG | - | chr2.4:27890983-27891002 | None:intergenic | 20.0% |
| !! | TTGAGGAAAATAATTGTAAT+AGG | - | chr2.4:27891254-27891273 | None:intergenic | 20.0% |
| !!! | AATTGTTTTGAATTTGAGTT+AGG | + | chr2.4:27889676-27889695 | MS.gene039009:intron | 20.0% |
| !!! | ATTGTTTTGAATTTGAGTTA+GGG | + | chr2.4:27889677-27889696 | MS.gene039009:intron | 20.0% |
| !!! | GCATTTTAATGTAATGTTAA+GGG | + | chr2.4:27889986-27890005 | MS.gene039009:intron | 20.0% |
| !!! | GTTCATACTAATAAAGTATT+TGG | + | chr2.4:27889859-27889878 | MS.gene039009:intron | 20.0% |
| !!! | TAATTGAAAATGTTTTCAGA+AGG | + | chr2.4:27891299-27891318 | MS.gene039009:intron | 20.0% |
| !!! | TAGATAGTTTGCATAAAATT+TGG | - | chr2.4:27890926-27890945 | None:intergenic | 20.0% |
| !!! | TATGCAAACTATCTAAAATA+AGG | + | chr2.4:27890931-27890950 | MS.gene039009:intron | 20.0% |
| !!! | TGCATTTTAATGTAATGTTA+AGG | + | chr2.4:27889985-27890004 | MS.gene039009:intron | 20.0% |
| !!! | TTGAATGTTTTAATAGAATC+TGG | - | chr2.4:27891884-27891903 | None:intergenic | 20.0% |
| ! | AATAATCCAAATGCAAGAAA+AGG | - | chr2.4:27890592-27890611 | None:intergenic | 25.0% |
| ! | AGAATATTACTGATGATACT+AGG | + | chr2.4:27889078-27889097 | MS.gene039009:CDS | 25.0% |
| ! | AGCATTTAGATAATGAAACA+TGG | - | chr2.4:27890034-27890053 | None:intergenic | 25.0% |
| ! | ATAATCCAAATGCAAGAAAA+GGG | - | chr2.4:27890591-27890610 | None:intergenic | 25.0% |
| ! | ATAGAATATGTAGCAAGTAA+CGG | - | chr2.4:27892372-27892391 | None:intergenic | 25.0% |
| ! | ATATTCTGATTATCATCAAG+AGG | - | chr2.4:27889065-27889084 | None:intergenic | 25.0% |
| ! | ATGGATGTTGAATAAGATTA+TGG | + | chr2.4:27889782-27889801 | MS.gene039009:intron | 25.0% |
| ! | ATTATCTAAATGCTTTGCTT+TGG | + | chr2.4:27890040-27890059 | MS.gene039009:intron | 25.0% |
| ! | ATTTAAGTATGCATCACTAT+GGG | - | chr2.4:27892069-27892088 | None:intergenic | 25.0% |
| ! | CAAACATAACAAATCATAGA+TGG | - | chr2.4:27889398-27889417 | None:intergenic | 25.0% |
| ! | CATACGAATCAAAAATTGAA+GGG | - | chr2.4:27889538-27889557 | None:intergenic | 25.0% |
| ! | CTGATTTCCATTAACATATA+GGG | - | chr2.4:27889597-27889616 | None:intergenic | 25.0% |
| ! | CTTCTACTAAATAACATCAA+TGG | + | chr2.4:27890895-27890914 | MS.gene039009:intron | 25.0% |
| ! | CTTTGCAATAGACTAAAAAA+GGG | - | chr2.4:27892430-27892449 | None:intergenic | 25.0% |
| ! | GTTAATGATTATTGAGGAAT+GGG | + | chr2.4:27890522-27890541 | MS.gene039009:intron | 25.0% |
| ! | TAAAACATTCAATGAAGCAT+TGG | + | chr2.4:27891892-27891911 | MS.gene039009:CDS | 25.0% |
| ! | TATTTAAGTATGCATCACTA+TGG | - | chr2.4:27892070-27892089 | None:intergenic | 25.0% |
| ! | TCTGATTTCCATTAACATAT+AGG | - | chr2.4:27889598-27889617 | None:intergenic | 25.0% |
| ! | TCTTTGCAATAGACTAAAAA+AGG | - | chr2.4:27892431-27892450 | None:intergenic | 25.0% |
| ! | TGAAAATGTAATTACAGAGT+GGG | - | chr2.4:27890265-27890284 | None:intergenic | 25.0% |
| ! | TTAAATTTGTATAAACGCTG+TGG | + | chr2.4:27890360-27890379 | MS.gene039009:intron | 25.0% |
| ! | TTATCTTCCCTATATGTTAA+TGG | + | chr2.4:27889587-27889606 | MS.gene039009:intron | 25.0% |
| !! | AATGATCTTCACATTTTACA+AGG | + | chr2.4:27891543-27891562 | MS.gene039009:CDS | 25.0% |
| !! | CAAACAAAAAGTATGACAAA+AGG | - | chr2.4:27890166-27890185 | None:intergenic | 25.0% |
| !! | CATGCATATTTTCATGTTTT+AGG | + | chr2.4:27891381-27891400 | MS.gene039009:intron | 25.0% |
| !! | GAAAATCTTTATAAGTTGGA+TGG | + | chr2.4:27890068-27890087 | MS.gene039009:intron | 25.0% |
| !! | TTGATGTTATTTAGTAGAAG+AGG | - | chr2.4:27890895-27890914 | None:intergenic | 25.0% |
| !!! | ACTTTTTGTTTGTGAAGTTA+AGG | + | chr2.4:27890174-27890193 | MS.gene039009:intron | 25.0% |
| !!! | ATTTGGGTTTTAATTTGAAC+TGG | + | chr2.4:27889876-27889895 | MS.gene039009:intron | 25.0% |
| !!! | CAAAAGTGTTGTTTTGAAAT+TGG | + | chr2.4:27892325-27892344 | MS.gene039009:intron | 25.0% |
| !!! | TTCTATTTTTCTACTTTGCA+CGG | + | chr2.4:27892386-27892405 | MS.gene039009:intron | 25.0% |
| AAGATTATGGAGATGAAGTA+TGG | + | chr2.4:27889795-27889814 | MS.gene039009:intron | 30.0% | |
| GAATTGAGGTACGTTTATAT+AGG | + | chr2.4:27890500-27890519 | MS.gene039009:intron | 30.0% | |
| GCATACGAATCAAAAATTGA+AGG | - | chr2.4:27889539-27889558 | None:intergenic | 30.0% | |
| GGAGGAAAATCTTTATAAGT+TGG | + | chr2.4:27890064-27890083 | MS.gene039009:intron | 30.0% | |
| GGATTATTGACAGGTTATTA+AGG | + | chr2.4:27890604-27890623 | MS.gene039009:intron | 30.0% | |
| GGTTAATGATTATTGAGGAA+TGG | + | chr2.4:27890521-27890540 | MS.gene039009:intron | 30.0% | |
| GTGAAAATGTAATTACAGAG+TGG | - | chr2.4:27890266-27890285 | None:intergenic | 30.0% | |
| GTGATGCATACTTAAATATG+TGG | + | chr2.4:27892072-27892091 | MS.gene039009:intron | 30.0% | |
| TAATTGTAATAGGCTGAAGA+CGG | - | chr2.4:27891244-27891263 | None:intergenic | 30.0% | |
| TCAAATGTGAATCATTCTCT+GGG | + | chr2.4:27891040-27891059 | MS.gene039009:intron | 30.0% | |
| TTAGTCTATTGCAAAGAAGT+TGG | + | chr2.4:27892434-27892453 | MS.gene039009:intron | 30.0% | |
| TTCTACTTCTTGAAAATGTG+AGG | + | chr2.4:27890687-27890706 | MS.gene039009:CDS | 30.0% | |
| TTTAAGTATGCATCACTATG+GGG | - | chr2.4:27892068-27892087 | None:intergenic | 30.0% | |
| ! | AAGACAAATGAAACACGTTT+TGG | - | chr2.4:27891193-27891212 | None:intergenic | 30.0% |
| ! | AAGCTACTTTAGATTAGCAA+CGG | + | chr2.4:27891731-27891750 | MS.gene039009:intron | 30.0% |
| ! | ATGTTTTCAGAAGGTAAACA+AGG | + | chr2.4:27891308-27891327 | MS.gene039009:intron | 30.0% |
| ! | ATTTATATCAAGAGTACGCA+TGG | - | chr2.4:27890310-27890329 | None:intergenic | 30.0% |
| ! | GACTTTTGATGAAATTTGCA+GGG | + | chr2.4:27890409-27890428 | MS.gene039009:intron | 30.0% |
| ! | TGAAAATGTGAGGTTTTACA+AGG | + | chr2.4:27890697-27890716 | MS.gene039009:CDS | 30.0% |
| ! | TGACTTTTGATGAAATTTGC+AGG | + | chr2.4:27890408-27890427 | MS.gene039009:intron | 30.0% |
| !! | GTTTAATTTGTATGCACTGA+CGG | + | chr2.4:27889273-27889292 | MS.gene039009:intron | 30.0% |
| AAAAGAAAACCAGCAACAGA+TGG | - | chr2.4:27890851-27890870 | None:intergenic | 35.0% | |
| AAAGTTGACATCCTTCTTCT+CGG | + | chr2.4:27891514-27891533 | MS.gene039009:CDS | 35.0% | |
| AACACTAATTGCAAAAGCCA+AGG | + | chr2.4:27891624-27891643 | MS.gene039009:CDS | 35.0% | |
| AAGGGTAGAGAATGTAAAAC+CGG | - | chr2.4:27892412-27892431 | None:intergenic | 35.0% | |
| AAGTAGCTTAGAAACAAACC+TGG | - | chr2.4:27891720-27891739 | None:intergenic | 35.0% | |
| ACTTCAAACTTTACCCTCTA+AGG | - | chr2.4:27889919-27889938 | None:intergenic | 35.0% | |
| ATCATATGGAATGGACCAAT+GGG | + | chr2.4:27891929-27891948 | MS.gene039009:CDS | 35.0% | |
| ATCTAAATGCTTTGCTTTGG+AGG | + | chr2.4:27890043-27890062 | MS.gene039009:intron | 35.0% | |
| CAAATGTGAATCATTCTCTG+GGG | + | chr2.4:27891041-27891060 | MS.gene039009:intron | 35.0% | |
| CAACTTATCTTCCTCTACAA+GGG | - | chr2.4:27891593-27891612 | None:intergenic | 35.0% | |
| CTGTATGTGAATGATGCATT+CGG | + | chr2.4:27890773-27890792 | MS.gene039009:CDS | 35.0% | |
| CTTGCATTTGGATTATTGAC+AGG | + | chr2.4:27890595-27890614 | MS.gene039009:intron | 35.0% | |
| GAACCAAACTCTATATGTGA+GGG | - | chr2.4:27892003-27892022 | None:intergenic | 35.0% | |
| GAACTGGAAGTAAGTAAAGA+CGG | + | chr2.4:27889892-27889911 | MS.gene039009:intron | 35.0% | |
| GTCAAATGTGAATCATTCTC+TGG | + | chr2.4:27891039-27891058 | MS.gene039009:intron | 35.0% | |
| TAATAGTTGGAATAGCAGCA+CGG | - | chr2.4:27889106-27889125 | None:intergenic | 35.0% | |
| TACCTCAATTCCAATGAGTT+CGG | - | chr2.4:27890491-27890510 | None:intergenic | 35.0% | |
| TCCATTCCATATGATGGTTT+GGG | - | chr2.4:27891924-27891943 | None:intergenic | 35.0% | |
| TGAACCAAACTCTATATGTG+AGG | - | chr2.4:27892004-27892023 | None:intergenic | 35.0% | |
| TTTGATGAAATTTGCAGGGA+AGG | + | chr2.4:27890413-27890432 | MS.gene039009:intron | 35.0% | |
| ! | AAATGTGAGGTTTTACAAGG+AGG | + | chr2.4:27890700-27890719 | MS.gene039009:CDS | 35.0% |
| ! | AGTCATTCTTTCTAGCCATT+TGG | + | chr2.4:27889151-27889170 | MS.gene039009:CDS | 35.0% |
| ! | GGTTTTCTTTTGCAAAAGGT+TGG | + | chr2.4:27890860-27890879 | MS.gene039009:intron | 35.0% |
| ! | GTGTCTTCAATCAAAAGTGT+CGG | - | chr2.4:27892114-27892133 | None:intergenic | 35.0% |
| ! | TCCAAGGTCTCATCTAAAAT+TGG | + | chr2.4:27891469-27891488 | MS.gene039009:CDS | 35.0% |
| ! | TCCAATTTTAGATGAGACCT+TGG | - | chr2.4:27891473-27891492 | None:intergenic | 35.0% |
| ! | TTCACATTTTACAAGGCACA+AGG | + | chr2.4:27891550-27891569 | MS.gene039009:CDS | 35.0% |
| ! | TTTTACAAAGACATCCAACG+AGG | - | chr2.4:27889315-27889334 | None:intergenic | 35.0% |
| !! | AGGAGTTGGTGTTACTAAAA+GGG | + | chr2.4:27892262-27892281 | MS.gene039009:intron | 35.0% |
| !! | TAGGAGTTGGTGTTACTAAA+AGG | + | chr2.4:27892261-27892280 | MS.gene039009:intron | 35.0% |
| !!! | TGCTGGTTTTCTTTTGCAAA+AGG | + | chr2.4:27890856-27890875 | MS.gene039009:CDS | 35.0% |
| AAGGGGGTGACAACTATTAT+TGG | + | chr2.4:27892471-27892490 | MS.gene039009:CDS | 40.0% | |
| AAGTAAAGACGGACCTTAGA+GGG | + | chr2.4:27889903-27889922 | MS.gene039009:intron | 40.0% | |
| AATTGCAAAAGCCAAGGCAA+AGG | + | chr2.4:27891630-27891649 | MS.gene039009:CDS | 40.0% | |
| ACCCAAACCATCATATGGAA+TGG | + | chr2.4:27891920-27891939 | MS.gene039009:CDS | 40.0% | |
| AGGAACTTGACTACCTTGTT+GGG | + | chr2.4:27891401-27891420 | MS.gene039009:intron | 40.0% | |
| AGGTGAGTTGTTTGCTTTAG+AGG | + | chr2.4:27889477-27889496 | MS.gene039009:intron | 40.0% | |
| ATACCACCCAAACCATCATA+TGG | + | chr2.4:27891915-27891934 | MS.gene039009:CDS | 40.0% | |
| ATTAAGGCCGAAGACAGTAT+TGG | + | chr2.4:27890620-27890639 | MS.gene039009:CDS | 40.0% | |
| ATTGCAAAAGCCAAGGCAAA+GGG | + | chr2.4:27891631-27891650 | MS.gene039009:CDS | 40.0% | |
| CATCATATGGAATGGACCAA+TGG | + | chr2.4:27891928-27891947 | MS.gene039009:CDS | 40.0% | |
| CATGTGTTTATGTCAGACAC+CGG | - | chr2.4:27892147-27892166 | None:intergenic | 40.0% | |
| CATTGGTCCATTCCATATGA+TGG | - | chr2.4:27891930-27891949 | None:intergenic | 40.0% | |
| CCAACTTATCTTCCTCTACA+AGG | - | chr2.4:27891594-27891613 | None:intergenic | 40.0% | |
| CCTTGTAGAGGAAGATAAGT+TGG | + | chr2.4:27891591-27891610 | MS.gene039009:CDS | 40.0% | |
| GAACCCTCACATATAGAGTT+TGG | + | chr2.4:27891997-27892016 | MS.gene039009:intron | 40.0% | |
| GAATATGAGTAACTCGCGTA+TGG | + | chr2.4:27889504-27889523 | MS.gene039009:intron | 40.0% | |
| GCAGTAAAAACGGAAAGTAG+CGG | - | chr2.4:27890973-27890992 | None:intergenic | 40.0% | |
| GTCCATTCCATATGATGGTT+TGG | - | chr2.4:27891925-27891944 | None:intergenic | 40.0% | |
| GTGACAACTATTATTGGAGG+AGG | + | chr2.4:27892477-27892496 | MS.gene039009:CDS | 40.0% | |
| TAAGTAAAGACGGACCTTAG+AGG | + | chr2.4:27889902-27889921 | MS.gene039009:intron | 40.0% | |
| TAGGAACTTGACTACCTTGT+TGG | + | chr2.4:27891400-27891419 | MS.gene039009:intron | 40.0% | |
| TCAAACTCAAACACTCCCAT+TGG | - | chr2.4:27891947-27891966 | None:intergenic | 40.0% | |
| TCCAGAAGTAGAAAAGTTGG+TGG | + | chr2.4:27890643-27890662 | MS.gene039009:CDS | 40.0% | |
| TGGTCCAGAAGTAGAAAAGT+TGG | + | chr2.4:27890640-27890659 | MS.gene039009:CDS | 40.0% | |
| TTCTGGACCAATACTGTCTT+CGG | - | chr2.4:27890630-27890649 | None:intergenic | 40.0% | |
| TTTGATTCAAGTGTCCTCGT+TGG | + | chr2.4:27889298-27889317 | MS.gene039009:intron | 40.0% | |
| ! | AAAAGTGTGGGAGATTTGAG+TGG | + | chr2.4:27888990-27889009 | MS.gene039009:CDS | 40.0% |
| ! | ATTCCATATGATGGTTTGGG+TGG | - | chr2.4:27891921-27891940 | None:intergenic | 40.0% |
| ! | ATTTTTCTACTTTGCACGGC+CGG | + | chr2.4:27892390-27892409 | MS.gene039009:intron | 40.0% |
| ! | TATTTGAAGCCATCTGTTGC+TGG | + | chr2.4:27890839-27890858 | MS.gene039009:CDS | 40.0% |
| ! | TCATTCTCTGGGGAAAACAT+AGG | + | chr2.4:27891051-27891070 | MS.gene039009:intron | 40.0% |
| ! | TGTTGCCCTTTTCTTGCATT+TGG | + | chr2.4:27890583-27890602 | MS.gene039009:intron | 40.0% |
| !! | AGGAATGGGTTGAAACATGA+TGG | + | chr2.4:27890536-27890555 | MS.gene039009:intron | 40.0% |
| !! | CTTTTGATTGAAGACACGTC+CGG | + | chr2.4:27892117-27892136 | MS.gene039009:intron | 40.0% |
| !! | GAGTTTGACAAGTTTGCTGT+TGG | + | chr2.4:27891959-27891978 | MS.gene039009:CDS | 40.0% |
| !! | TAAATGCTTTGCTTTGGAGG+AGG | + | chr2.4:27890046-27890065 | MS.gene039009:intron | 40.0% |
| !!! | GCAAGCTTTTTTGCATGTTC+AGG | - | chr2.4:27890740-27890759 | None:intergenic | 40.0% |
| AAATTTGCAGGGAAGGCCAA+AGG | + | chr2.4:27890420-27890439 | MS.gene039009:intron | 45.0% | |
| AAGCCCAAAAAGGCCATTTG+CGG | + | chr2.4:27891432-27891451 | MS.gene039009:CDS | 45.0% | |
| AAGTATGCATCACTATGGGG+TGG | - | chr2.4:27892065-27892084 | None:intergenic | 45.0% | |
| AATTTGCAGGGAAGGCCAAA+GGG | + | chr2.4:27890421-27890440 | MS.gene039009:intron | 45.0% | |
| ATGCTGGCACAGTCTGAAAA+GGG | - | chr2.4:27891823-27891842 | None:intergenic | 45.0% | |
| CTCCGAACTCATTGGAATTG+AGG | + | chr2.4:27890486-27890505 | MS.gene039009:CDS | 45.0% | |
| CTCTCTCTCGAATTGAGAGA+TGG | + | chr2.4:27889763-27889782 | MS.gene039009:intron | 45.0% | |
| GAGATGAAGTATGGAGACAG+AGG | + | chr2.4:27889804-27889823 | MS.gene039009:intron | 45.0% | |
| GGAACTTGACTACCTTGTTG+GGG | + | chr2.4:27891402-27891421 | MS.gene039009:intron | 45.0% | |
| GGATATGTGGCTCATGACAT+CGG | - | chr2.4:27892538-27892557 | None:intergenic | 45.0% | |
| GGGGTGACAACTATTATTGG+AGG | + | chr2.4:27892474-27892493 | MS.gene039009:CDS | 45.0% | |
| TATTTGGGAGTGACACCCTT+TGG | - | chr2.4:27890439-27890458 | None:intergenic | 45.0% | |
| TGCGGAGTTAAAGGGAAAGA+AGG | + | chr2.4:27889013-27889032 | MS.gene039009:CDS | 45.0% | |
| TGTCACTCCCAAATACAGCT+TGG | + | chr2.4:27890444-27890463 | MS.gene039009:CDS | 45.0% | |
| TTGAGTGGTGCGGAGTTAAA+GGG | + | chr2.4:27889005-27889024 | MS.gene039009:CDS | 45.0% | |
| TTTGAGTGGTGCGGAGTTAA+AGG | + | chr2.4:27889004-27889023 | MS.gene039009:CDS | 45.0% | |
| ! | AGTTGGTTCATCCCTTGTAG+AGG | + | chr2.4:27891579-27891598 | MS.gene039009:CDS | 45.0% |
| ! | ATTGCCGCAAATGGCCTTTT+TGG | - | chr2.4:27891439-27891458 | None:intergenic | 45.0% |
| ! | GCAAGTTTGGAGCTATTGGA+AGG | + | chr2.4:27892570-27892589 | MS.gene039009:CDS | 45.0% |
| ! | GCCACCAACTTTTCTACTTC+TGG | - | chr2.4:27890647-27890666 | None:intergenic | 45.0% |
| ! | TGGTGCAAGTTTGGAGCTAT+TGG | + | chr2.4:27892566-27892585 | MS.gene039009:CDS | 45.0% |
| ! | TTGCCGCAAATGGCCTTTTT+GGG | - | chr2.4:27891438-27891457 | None:intergenic | 45.0% |
| !! | AAGAGGTGCCAAGCTGTATT+TGG | - | chr2.4:27890455-27890474 | None:intergenic | 45.0% |
| !! | AGAGGTGCCAAGCTGTATTT+GGG | - | chr2.4:27890454-27890473 | None:intergenic | 45.0% |
| !! | CAAGTTTGCTGTTGGAACAG+AGG | + | chr2.4:27891967-27891986 | MS.gene039009:CDS | 45.0% |
| AAGAAGTTGGCCGACCTAAG+TGG | + | chr2.4:27892447-27892466 | MS.gene039009:CDS | 50.0% | |
| AAGGCACAAGGTCTTGCAGT+TGG | + | chr2.4:27891562-27891581 | MS.gene039009:CDS | 50.0% | |
| AAGGCCATTTGCGGCAATTG+TGG | + | chr2.4:27891441-27891460 | MS.gene039009:CDS | 50.0% | |
| ACTCTTGCTGCCAAGTGATG+TGG | + | chr2.4:27891660-27891679 | MS.gene039009:CDS | 50.0% | |
| AGAAGTAGAACTCCTCCGTC+TGG | - | chr2.4:27890677-27890696 | None:intergenic | 50.0% | |
| AGGAGATTCTGTTGCAGCTG+TGG | + | chr2.4:27892497-27892516 | MS.gene039009:CDS | 50.0% | |
| AGGCCATTTGCGGCAATTGT+GGG | + | chr2.4:27891442-27891461 | MS.gene039009:CDS | 50.0% | |
| ATGCATTCGGTACTGCTCAC+AGG | + | chr2.4:27890786-27890805 | MS.gene039009:CDS | 50.0% | |
| CAAACCTGGCTGTTTGCATC+AGG | - | chr2.4:27891706-27891725 | None:intergenic | 50.0% | |
| CACATACAGATCTGCGAGTG+CGG | - | chr2.4:27890762-27890781 | None:intergenic | 50.0% | |
| CATCTGCTATCCCTGATGGT+TGG | + | chr2.4:27891840-27891859 | MS.gene039009:CDS | 50.0% | |
| CCAACTCCTACTCGATGAAG+CGG | - | chr2.4:27892251-27892270 | None:intergenic | 50.0% | |
| CCAATCCCATCCAACCATCA+GGG | - | chr2.4:27891853-27891872 | None:intergenic | 50.0% | |
| GACTCCCTCTGTTGATGCAT+GGG | - | chr2.4:27890813-27890832 | None:intergenic | 50.0% | |
| GACTGGTGTAGCTTCATCGA+GGG | - | chr2.4:27892619-27892638 | None:intergenic | 50.0% | |
| GATGCTGGCACAGTCTGAAA+AGG | - | chr2.4:27891824-27891843 | None:intergenic | 50.0% | |
| GCTATCCCTGATGGTTGGAT+GGG | + | chr2.4:27891845-27891864 | MS.gene039009:CDS | 50.0% | |
| GCTGAAGACGGAAGACAAGT+TGG | - | chr2.4:27891232-27891251 | None:intergenic | 50.0% | |
| GGGCAGTATCAAGCCCAAAA+AGG | + | chr2.4:27891422-27891441 | MS.gene039009:CDS | 50.0% | |
| GGTGACACAGACACGAACAT+CGG | - | chr2.4:27892230-27892249 | None:intergenic | 50.0% | |
| GGTTGGATGGGATTGGACAT+TGG | + | chr2.4:27891857-27891876 | MS.gene039009:CDS | 50.0% | |
| GTCATGAGCCACATATCCAC+CGG | + | chr2.4:27892540-27892559 | MS.gene039009:CDS | 50.0% | |
| GTTGACATCCTTCTTCTCGG+TGG | + | chr2.4:27891517-27891536 | MS.gene039009:CDS | 50.0% | |
| GTTGCAGCTGTGGAGAAAGT+AGG | + | chr2.4:27892507-27892526 | MS.gene039009:CDS | 50.0% | |
| TAGAACTCCTCCGTCTGGAA+GGG | - | chr2.4:27890672-27890691 | None:intergenic | 50.0% | |
| TCATTCCTCCACCGAGAAGA+AGG | - | chr2.4:27891528-27891547 | None:intergenic | 50.0% | |
| TCCAATCCCATCCAACCATC+AGG | - | chr2.4:27891854-27891873 | None:intergenic | 50.0% | |
| TCTGCGATCACCACATCACT+TGG | - | chr2.4:27891673-27891692 | None:intergenic | 50.0% | |
| TGACTCCCTCTGTTGATGCA+TGG | - | chr2.4:27890814-27890833 | None:intergenic | 50.0% | |
| TGCATTCGGTACTGCTCACA+GGG | + | chr2.4:27890787-27890806 | MS.gene039009:CDS | 50.0% | |
| TGCTATCCCTGATGGTTGGA+TGG | + | chr2.4:27891844-27891863 | MS.gene039009:CDS | 50.0% | |
| TGTGGGAGATTTGAGTGGTG+CGG | + | chr2.4:27888995-27889014 | MS.gene039009:CDS | 50.0% | |
| TTGGAAGGCAAAGAGCTTCC+CGG | + | chr2.4:27892585-27892604 | MS.gene039009:CDS | 50.0% | |
| TTGGCCGACCTAAGTGGAAA+GGG | + | chr2.4:27892453-27892472 | MS.gene039009:CDS | 50.0% | |
| TTGTCACCCCCTTTCCACTT+AGG | - | chr2.4:27892464-27892483 | None:intergenic | 50.0% | |
| AGGGCCCATGCATCAACAGA+GGG | + | chr2.4:27890806-27890825 | MS.gene039009:CDS | 55.0% | |
| ATGAGCCACATATCCACCGG+TGG | + | chr2.4:27892543-27892562 | MS.gene039009:CDS | 55.0% | |
| CACCCCCTTTCCACTTAGGT+CGG | - | chr2.4:27892460-27892479 | None:intergenic | 55.0% | |
| CCAATGAGTTCGGAGAGCCT+GGG | - | chr2.4:27890481-27890500 | None:intergenic | 55.0% | |
| CCACCCACAATTGCCGCAAA+TGG | - | chr2.4:27891448-27891467 | None:intergenic | 55.0% | |
| CCAGCATCTGCTATCCCTGA+TGG | + | chr2.4:27891836-27891855 | MS.gene039009:CDS | 55.0% | |
| CCATCAGGGATAGCAGATGC+TGG | - | chr2.4:27891839-27891858 | None:intergenic | 55.0% | |
| CCATTTGCGGCAATTGTGGG+TGG | + | chr2.4:27891445-27891464 | MS.gene039009:CDS | 55.0% | |
| CCCTGATGGTTGGATGGGAT+TGG | + | chr2.4:27891850-27891869 | MS.gene039009:CDS | 55.0% | |
| CCGCTTCATCGAGTAGGAGT+TGG | + | chr2.4:27892248-27892267 | MS.gene039009:intron | 55.0% | |
| CGACTGGTGTAGCTTCATCG+AGG | - | chr2.4:27892620-27892639 | None:intergenic | 55.0% | |
| CTCCAAACTTGCACCACCAC+CGG | - | chr2.4:27892562-27892581 | None:intergenic | 55.0% | |
| GACATCCTTCTTCTCGGTGG+AGG | + | chr2.4:27891520-27891539 | MS.gene039009:CDS | 55.0% | |
| GAGTGACACACCCTTTGCCT+TGG | - | chr2.4:27891644-27891663 | None:intergenic | 55.0% | |
| GGCAATTGTGGGTGGTTCCA+AGG | + | chr2.4:27891453-27891472 | MS.gene039009:CDS | 55.0% | |
| GGCTTGATACTGCCCCAACA+AGG | - | chr2.4:27891417-27891436 | None:intergenic | 55.0% | |
| GTAGAACTCCTCCGTCTGGA+AGG | - | chr2.4:27890673-27890692 | None:intergenic | 55.0% | |
| GTGTCACCGCTTCATCGAGT+AGG | + | chr2.4:27892242-27892261 | MS.gene039009:intron | 55.0% | |
| GTTGGCCGACCTAAGTGGAA+AGG | + | chr2.4:27892452-27892471 | MS.gene039009:CDS | 55.0% | |
| TATGTCAGACACCGGACGTC+CGG | - | chr2.4:27892139-27892158 | None:intergenic | 55.0% | |
| TCCAATGAGTTCGGAGAGCC+TGG | - | chr2.4:27890482-27890501 | None:intergenic | 55.0% | |
| TGCTCCTGATGCAAACAGCC+AGG | + | chr2.4:27891699-27891718 | MS.gene039009:CDS | 55.0% | |
| TGGCCGACCTAAGTGGAAAG+GGG | + | chr2.4:27892454-27892473 | MS.gene039009:CDS | 55.0% | |
| TTCATCGAGGGCGAGAACAC+CGG | - | chr2.4:27892607-27892626 | None:intergenic | 55.0% | |
| ! | TTGGTGGCTTCCCTTCCAGA+CGG | + | chr2.4:27890659-27890678 | MS.gene039009:CDS | 55.0% |
| AGCCACATATCCACCGGTGG+TGG | + | chr2.4:27892546-27892565 | MS.gene039009:CDS | 60.0% | |
| CAAACTTGCACCACCACCGG+TGG | - | chr2.4:27892559-27892578 | None:intergenic | 60.0% | |
| CACCACCACCGGTGGATATG+TGG | - | chr2.4:27892551-27892570 | None:intergenic | 60.0% | |
| CAGGGCCCATGCATCAACAG+AGG | + | chr2.4:27890805-27890824 | MS.gene039009:CDS | 60.0% | |
| CCCAGGCTCTCCGAACTCAT+TGG | + | chr2.4:27890478-27890497 | MS.gene039009:CDS | 60.0% | |
| GCTTGGCACCTCTTGTTCCC+AGG | + | chr2.4:27890461-27890480 | MS.gene039009:CDS | 60.0% | |
| GGCCGACCTAAGTGGAAAGG+GGG | + | chr2.4:27892455-27892474 | MS.gene039009:CDS | 60.0% | |
| TCATCGAGGGCGAGAACACC+GGG | - | chr2.4:27892606-27892625 | None:intergenic | 60.0% | |
| TCGGAGAGCCTGGGAACAAG+AGG | - | chr2.4:27890472-27890491 | None:intergenic | 60.0% | |
| TGAAGACACGTCCGGACGTC+CGG | + | chr2.4:27892125-27892144 | MS.gene039009:intron | 60.0% | |
| ! | CACCGGTGGTGGTGCAAGTT+TGG | + | chr2.4:27892557-27892576 | MS.gene039009:CDS | 60.0% |
| GTGGCTTCCCTTCCAGACGG+AGG | + | chr2.4:27890662-27890681 | MS.gene039009:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 27888981 | 27892647 | 27888981 | ID=MS.gene039009 |
| chr2.4 | mRNA | 27888981 | 27892647 | 27888981 | ID=MS.gene039009.t1;Parent=MS.gene039009 |
| chr2.4 | exon | 27888981 | 27889172 | 27888981 | ID=MS.gene039009.t1.exon1;Parent=MS.gene039009.t1 |
| chr2.4 | CDS | 27888981 | 27889172 | 27888981 | ID=cds.MS.gene039009.t1;Parent=MS.gene039009.t1 |
| chr2.4 | exon | 27890430 | 27890507 | 27890430 | ID=MS.gene039009.t1.exon2;Parent=MS.gene039009.t1 |
| chr2.4 | CDS | 27890430 | 27890507 | 27890430 | ID=cds.MS.gene039009.t1;Parent=MS.gene039009.t1 |
| chr2.4 | exon | 27890617 | 27890877 | 27890617 | ID=MS.gene039009.t1.exon3;Parent=MS.gene039009.t1 |
| chr2.4 | CDS | 27890617 | 27890877 | 27890617 | ID=cds.MS.gene039009.t1;Parent=MS.gene039009.t1 |
| chr2.4 | exon | 27891403 | 27891720 | 27891403 | ID=MS.gene039009.t1.exon4;Parent=MS.gene039009.t1 |
| chr2.4 | CDS | 27891403 | 27891720 | 27891403 | ID=cds.MS.gene039009.t1;Parent=MS.gene039009.t1 |
| chr2.4 | exon | 27891830 | 27891988 | 27891830 | ID=MS.gene039009.t1.exon5;Parent=MS.gene039009.t1 |
| chr2.4 | CDS | 27891830 | 27891988 | 27891830 | ID=cds.MS.gene039009.t1;Parent=MS.gene039009.t1 |
| chr2.4 | exon | 27892438 | 27892647 | 27892438 | ID=MS.gene039009.t1.exon6;Parent=MS.gene039009.t1 |
| chr2.4 | CDS | 27892438 | 27892647 | 27892438 | ID=cds.MS.gene039009.t1;Parent=MS.gene039009.t1 |
| Gene Sequence |
| Protein sequence |
