AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene039326

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039326.t1 MTR_2g073240 99.403 670 4 0 1 670 13 682 0.0 1390
MS.gene039326.t1 MTR_0034s0060 89.521 668 69 1 1 668 131 797 0.0 1262
MS.gene039326.t1 MTR_1g009600 74.925 666 155 2 4 669 2 655 0.0 1046
MS.gene039326.t1 MTR_4g102550 81.315 289 54 0 380 668 7 295 2.28e-173 496
MS.gene039326.t1 MTR_3g452330 52.486 181 34 1 85 265 1 129 8.07e-49 171
MS.gene039326.t1 MTR_3g452330 63.918 97 35 0 379 475 141 237 1.16e-33 129
MS.gene039326.t1 MTR_2g096660 30.573 314 189 10 9 312 40 334 7.69e-27 112
MS.gene039326.t1 MTR_4g063600 28.617 311 199 10 9 312 34 328 5.46e-26 110
MS.gene039326.t1 MTR_4g063600 28.296 311 197 11 9 312 34 325 2.36e-25 108
MS.gene039326.t1 MTR_4g120030 27.619 315 195 11 7 312 111 401 2.57e-25 109
MS.gene039326.t1 MTR_8g089180 26.243 362 218 15 1 327 63 410 1.24e-24 107
MS.gene039326.t1 MTR_8g089180 26.243 362 218 15 1 327 63 410 1.24e-24 107
MS.gene039326.t1 MTR_2g032100 25.978 358 224 13 1 327 63 410 3.86e-24 105
MS.gene039326.t1 MTR_1g088480 27.331 311 197 12 9 312 120 408 3.42e-22 100
MS.gene039326.t1 MTR_4g129820 27.193 342 208 9 8 321 96 424 4.04e-22 100
MS.gene039326.t1 MTR_4g024600 26.822 343 208 8 8 321 102 430 2.74e-20 94.7
MS.gene039326.t1 MTR_4g102270 28.274 336 212 10 7 320 93 421 2.30e-19 91.7
MS.gene039326.t1 MTR_5g011940 26.571 350 222 10 5 326 88 430 3.92e-19 90.9
MS.gene039326.t1 MTR_0354s0040 26.608 342 210 8 8 321 83 411 5.33e-19 90.5
MS.gene039326.t1 MTR_8g099535 27.066 351 217 13 7 328 4 344 1.93e-18 87.8
MS.gene039326.t1 MTR_4g134490 24.217 351 225 14 7 327 25 364 3.89e-18 87.4
MS.gene039326.t1 MTR_3g084090 26.647 334 216 10 9 320 101 427 4.26e-17 84.7
MS.gene039326.t1 MTR_4g134490 24.309 362 217 16 7 327 25 370 2.67e-16 81.6
MS.gene039326.t1 MTR_2g032100 27.778 198 128 6 1 191 63 252 1.40e-15 78.6
MS.gene039326.t1 MTR_3g105440 29.796 245 147 9 1 234 1 231 1.38e-14 77.4
MS.gene039326.t1 MTR_3g105440 29.796 245 147 9 1 234 1 231 1.43e-14 77.4
MS.gene039326.t1 MTR_1g107455 24.377 361 218 14 6 318 18 371 1.65e-14 76.3
MS.gene039326.t1 MTR_3g101500 24.280 243 169 6 7 248 2 230 2.14e-12 69.3
MS.gene039326.t1 MTR_4g056100 23.546 361 221 13 6 318 18 371 3.60e-12 68.9
MS.gene039326.t1 MTR_3g101500 24.280 243 169 6 7 248 2 230 4.14e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039326.t1 AT1G78570 88.376 671 74 2 1 669 1 669 0.0 1242
MS.gene039326.t1 AT3G14790 85.351 669 93 2 1 669 1 664 0.0 1170
MS.gene039326.t1 AT3G14790 85.351 669 93 2 1 669 4 667 0.0 1170
MS.gene039326.t1 AT1G53500 85.479 668 93 3 2 669 4 667 0.0 1160
MS.gene039326.t1 AT1G63000 83.746 283 46 0 387 669 15 297 1.83e-178 509
MS.gene039326.t1 AT2G28760 30.032 313 192 10 9 312 33 327 4.24e-28 116
MS.gene039326.t1 AT2G28760 30.032 313 192 10 9 312 33 327 4.24e-28 116
MS.gene039326.t1 AT2G28760 30.032 313 192 10 9 312 33 327 4.24e-28 116
MS.gene039326.t1 AT4G20460 27.714 350 212 12 8 327 71 409 7.05e-28 117
MS.gene039326.t1 AT2G28760 30.032 313 192 10 9 312 64 358 1.02e-27 115
MS.gene039326.t1 AT5G59290 29.712 313 193 10 9 312 3 297 1.37e-27 114
MS.gene039326.t1 AT5G59290 29.712 313 193 10 9 312 32 326 1.93e-27 114
MS.gene039326.t1 AT5G59290 29.712 313 193 10 9 312 25 319 2.22e-27 114
MS.gene039326.t1 AT5G59290 29.712 313 193 10 9 312 47 341 3.13e-27 114
MS.gene039326.t1 AT3G46440 29.393 313 194 10 9 312 31 325 4.65e-27 113
MS.gene039326.t1 AT3G46440 29.393 313 194 10 9 312 31 325 4.65e-27 113
MS.gene039326.t1 AT3G53520 27.187 320 209 10 9 321 122 424 8.90e-25 108
MS.gene039326.t1 AT3G62830 27.157 313 200 10 9 312 121 414 1.31e-24 107
MS.gene039326.t1 AT3G62830 27.157 313 200 10 9 312 121 414 1.31e-24 107
MS.gene039326.t1 AT2G47650 26.837 313 201 10 9 312 123 416 5.32e-24 105
MS.gene039326.t1 AT5G44480 26.989 352 210 15 8 326 72 409 1.22e-23 104
MS.gene039326.t1 AT5G44480 26.989 352 210 15 8 326 72 409 1.22e-23 104
MS.gene039326.t1 AT5G44480 26.989 352 210 15 8 326 72 409 1.22e-23 104
MS.gene039326.t1 AT5G44480 26.989 352 210 15 8 326 96 433 1.46e-23 104
MS.gene039326.t1 AT2G47650 26.498 317 203 10 9 312 123 422 7.38e-23 102
MS.gene039326.t1 AT1G30620 27.809 356 214 15 4 327 65 409 1.37e-22 101
MS.gene039326.t1 AT3G53520 26.875 320 208 11 9 321 122 422 1.45e-22 101
MS.gene039326.t1 AT1G30620 27.809 356 214 15 4 327 66 410 1.47e-22 101
MS.gene039326.t1 AT1G30620 27.809 356 214 15 4 327 66 410 1.47e-22 101
MS.gene039326.t1 AT1G30620 27.809 356 214 15 4 327 66 410 1.47e-22 101
MS.gene039326.t1 AT1G30620 27.809 356 214 15 4 327 66 410 1.47e-22 101
MS.gene039326.t1 AT3G53520 25.948 343 207 11 9 321 122 447 8.43e-22 99.4
MS.gene039326.t1 AT1G63180 26.331 357 222 14 1 327 1 346 1.03e-20 94.7
MS.gene039326.t1 AT4G00110 26.844 339 219 8 8 324 92 423 2.22e-20 94.7
MS.gene039326.t1 AT2G45310 26.866 335 216 9 9 321 99 426 9.76e-20 92.8
MS.gene039326.t1 AT1G02000 25.893 336 220 9 8 321 93 421 7.95e-19 90.1
MS.gene039326.t1 AT4G30440 30.901 233 151 6 8 234 89 317 2.47e-18 88.6
MS.gene039326.t1 AT1G64440 27.920 351 210 15 8 327 4 342 5.57e-18 86.7
MS.gene039326.t1 AT1G30620 30.256 195 121 6 4 191 66 252 1.33e-17 84.3
MS.gene039326.t1 AT3G53520 27.897 233 148 7 8 234 121 339 2.24e-17 84.7
MS.gene039326.t1 AT4G23920 26.163 344 219 12 7 323 3 338 3.88e-16 80.9
MS.gene039326.t1 AT1G63180 26.689 296 181 11 1 267 1 289 4.44e-16 80.1
MS.gene039326.t1 AT3G23820 26.567 335 217 10 8 320 113 440 1.53e-15 80.1
MS.gene039326.t1 AT1G47290 26.757 370 201 15 3 319 6 358 6.55e-15 77.4
MS.gene039326.t1 AT4G12250 26.100 341 223 8 3 321 92 425 1.54e-14 77.0
MS.gene039326.t1 AT1G47290 26.757 370 201 15 3 319 6 358 1.75e-14 76.6
MS.gene039326.t1 AT2G26260 26.506 249 148 8 2 234 5 234 1.75e-13 73.9
MS.gene039326.t1 AT1G73250 27.473 182 120 5 151 322 140 319 8.03e-13 70.5

Find 161 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGAACTCATTCTTCAATT+TGG 0.167758 2.2:+19327096 None:intergenic
AGGTTCAGGCATTGGGTTTA+AGG 0.187878 2.2:-19327702 MS.gene039326:CDS
GCTTACCATTGCCTTGGTTT+TGG 0.211812 2.2:+19327643 None:intergenic
TCTTTGATGGAAAGCAATTC+TGG 0.218557 2.2:+19327076 None:intergenic
TTCACCAAGAACAACATTTA+TGG 0.223050 2.2:-19328886 MS.gene039326:CDS
GTTGGACATGTTTACAATAT+TGG 0.241068 2.2:-19328463 MS.gene039326:CDS
TTTGCCATCTCAATTGAAAT+AGG 0.250438 2.2:+19327292 None:intergenic
CCCTTCACAAACTTGAAGTT+TGG 0.255601 2.2:+19329024 None:intergenic
ATTGCCAAGAGGATAAATTT+TGG 0.258449 2.2:+19328592 None:intergenic
TAGAAAGAACCGGCGAAATT+AGG 0.282017 2.2:+19327668 None:intergenic
CCTCTCAAGTTCTTGATCTA+TGG 0.292307 2.2:-19328043 MS.gene039326:CDS
AACCCAATGCCTGAACCTTC+TGG 0.294957 2.2:+19327707 None:intergenic
CTTGATAAGTGATTCTTTGA+TGG 0.295568 2.2:+19327063 None:intergenic
CAAGGGATTCCATATGAATA+TGG 0.304468 2.2:-19327974 MS.gene039326:CDS
TCCAAACAGCATGACTGTTT+TGG 0.309945 2.2:-19327326 MS.gene039326:CDS
ACTCATGTCGACAACTCTTT+TGG 0.326250 2.2:-19328922 MS.gene039326:CDS
TTAGAAGCTTGCAAGGTAAC+TGG 0.328359 2.2:-19328850 MS.gene039326:CDS
TGAAGTTCCAGATACCTCTT+AGG 0.329274 2.2:+19327263 None:intergenic
ATGGCGTATGGTAGGTCTTA+TGG 0.335557 2.2:-19328682 MS.gene039326:CDS
TTTCCACGTGTTGTGATTAC+CGG 0.356238 2.2:+19328655 None:intergenic
AAGTTAGCCCACTTGAAGTT+TGG 0.358387 2.2:+19327181 None:intergenic
ATCCAGAAGGTTCAGGCATT+GGG 0.362912 2.2:-19327709 MS.gene039326:CDS
TCCAAAACAGTCATGCTGTT+TGG 0.364697 2.2:+19327325 None:intergenic
TGAGAAGAGTTTGCAAATAT+CGG 0.373028 2.2:+19328405 None:intergenic
AGTACCATAAATGTTGTTCT+TGG 0.373878 2.2:+19328882 None:intergenic
ACACGTGGAAACAATGTCTA+TGG 0.379199 2.2:-19328643 MS.gene039326:CDS
GGAAAAGTTCTTCCGATTCA+TGG 0.380568 2.2:-19328565 MS.gene039326:CDS
ACTCACATCGCCCCACCAAT+TGG 0.381095 2.2:+19328225 None:intergenic
TTTATTGTAACGTGAAATCT+TGG 0.382737 2.2:+19327360 None:intergenic
GGTTGGATCGGTGGTTTGCT+TGG 0.389171 2.2:-19328013 MS.gene039326:CDS
AGAGGAACCTAAGAGGTATC+TGG 0.395333 2.2:-19327270 MS.gene039326:CDS
ATCCTCATTACTGGGGCAGC+TGG 0.396925 2.2:-19329168 MS.gene039326:CDS
CCGTACTCTGCAACAAAAGC+TGG 0.402137 2.2:-19328721 MS.gene039326:CDS
CTTTGATGGAAAGCAATTCT+GGG 0.407319 2.2:+19327077 None:intergenic
ATGTTGCCAACCGGCTTATC+CGG 0.407727 2.2:-19329131 MS.gene039326:CDS
CGATCAAAAGTTGAAGGTGT+TGG 0.413891 2.2:-19328314 MS.gene039326:CDS
CAAACTCTTCTCAATTGATC+CGG 0.414049 2.2:-19328395 MS.gene039326:CDS
GATTCCAAAATTTATCCTCT+TGG 0.417223 2.2:-19328596 MS.gene039326:CDS
GTTGGATCGGTGGTTTGCTT+GGG 0.417488 2.2:-19328012 MS.gene039326:CDS
TCTTGACGATCAAAAGTTGA+AGG 0.429287 2.2:-19328320 MS.gene039326:CDS
GTAAGCACTGATGAGGTCTA+TGG 0.433555 2.2:-19328805 MS.gene039326:CDS
AAGTTTGGAGATGATCTTGA+AGG 0.433792 2.2:+19329039 None:intergenic
CATCCAGAAGGTTCAGGCAT+TGG 0.437868 2.2:-19327710 MS.gene039326:CDS
TTGCGTCTCATGTTGCCAAC+CGG 0.441564 2.2:-19329140 MS.gene039326:CDS
TGGTAGGTCTTATGGATTGC+CGG 0.441733 2.2:-19328674 MS.gene039326:CDS
ATGACAATGTATGCACTCTC+AGG 0.444077 2.2:-19327432 MS.gene039326:CDS
ATTCCATATGAATATGGAAA+AGG 0.444160 2.2:-19327968 MS.gene039326:CDS
GAAGAGCCAATGCTCTTTGT+AGG 0.448024 2.2:+19328076 None:intergenic
TAGCTAGCTTACCATTGCCT+TGG 0.452476 2.2:+19327637 None:intergenic
CGTTGTTGGGACTTTAACAT+TGG 0.453861 2.2:-19327807 MS.gene039326:CDS
ACAGATGAGGATGCAGTTGT+TGG 0.455390 2.2:-19328778 MS.gene039326:CDS
TTCAATGCAGCAGGTGTGAC+TGG 0.455424 2.2:-19327884 MS.gene039326:CDS
GTATAAAATTTGTAGAGAAC+AGG 0.456495 2.2:-19328366 MS.gene039326:CDS
GAAGCTCATCCAGAAGGTTC+AGG 0.456647 2.2:-19327716 MS.gene039326:CDS
GATTCGCACCAATCAACATT+AGG 0.457249 2.2:+19327857 None:intergenic
AAGTACCTCTGATCATTAAA+CGG 0.458517 2.2:+19328343 None:intergenic
TTTGAAGTTATCCTTCATAA+GGG 0.460918 2.2:-19328490 MS.gene039326:CDS
CCATCCGTGTCAACGTTGTT+GGG 0.465475 2.2:-19327820 MS.gene039326:CDS
ACCATCCGTGTCAACGTTGT+TGG 0.468379 2.2:-19327821 MS.gene039326:CDS
TCGTTGTGGCTCACGGCGCC+AGG 0.468437 2.2:+19327235 None:intergenic
TTCTTGATCTATGGAAAGAC+TGG 0.468627 2.2:-19328034 MS.gene039326:CDS
ATCTGGAACTTCACAAATCC+TGG 0.470303 2.2:-19327253 MS.gene039326:CDS
CTCACATCGCCCCACCAATT+GGG 0.477881 2.2:+19328226 None:intergenic
GTTGAAGGTGTTGGGTTGGT+CGG 0.479058 2.2:-19328305 MS.gene039326:CDS
TTACAATATTGGAACTAAGA+AGG 0.484035 2.2:-19328452 MS.gene039326:CDS
CGTACTCTGCAACAAAAGCT+GGG 0.487722 2.2:-19328720 MS.gene039326:CDS
GAGATGATCTTGAAGGAATG+AGG 0.489742 2.2:+19329046 None:intergenic
GGTATATCAACAATCCCAAT+TGG 0.492254 2.2:-19328240 MS.gene039326:CDS
TTGCTTAGGTCAGATGAAAT+CGG 0.492377 2.2:+19327400 None:intergenic
TCTTCCTATTTCAATTGAGA+TGG 0.498900 2.2:-19327296 MS.gene039326:CDS
TCTTGCAGCAACTATCACTT+TGG 0.499126 2.2:+19327141 None:intergenic
ATCCTTCATAAGGGAGAGGT+TGG 0.502469 2.2:-19328481 MS.gene039326:CDS
AGACCTCATCAGTGCTTACA+TGG 0.502767 2.2:+19328809 None:intergenic
TTCCATATGAATATGGAAAA+GGG 0.506901 2.2:-19327967 MS.gene039326:CDS
TGATCTATGGAAAGACTGGT+TGG 0.511007 2.2:-19328030 MS.gene039326:CDS
TAGCATAGTTCATCATCAAA+AGG 0.516883 2.2:+19327762 None:intergenic
GTTCTTCCGATTCATGGTGA+TGG 0.517259 2.2:-19328559 MS.gene039326:CDS
GGGAAATTGTGCGAGAAACA+AGG 0.518098 2.2:-19327992 MS.gene039326:CDS
TGCAAGAAGCAACAATGAAA+TGG 0.518316 2.2:-19327125 MS.gene039326:CDS
TGAAATTGCGTGGATTGCTT+AGG 0.528340 2.2:+19327386 None:intergenic
TTTATCCTCTTGGCAATGCA+AGG 0.531302 2.2:-19328586 MS.gene039326:CDS
TTGATGATGAACTATGCTAC+CGG 0.533136 2.2:-19327758 MS.gene039326:CDS
CCAAACTTCAAGTTTGTGAA+GGG 0.534223 2.2:-19329024 MS.gene039326:CDS
GATCAAAAGTTGAAGGTGTT+GGG 0.534566 2.2:-19328313 MS.gene039326:CDS
TTTGAACCATCACCATGAAT+CGG 0.534712 2.2:+19328553 None:intergenic
ATTGTTGATATACCAGTCCA+TGG 0.535147 2.2:+19328249 None:intergenic
CTGGTAGACCTAATGTTGAT+TGG 0.535864 2.2:-19327865 MS.gene039326:CDS
GAGAGAACAACATGGGAAGA+AGG 0.538587 2.2:-19328283 MS.gene039326:CDS
TCCAAACTTCAAGTTTGTGA+AGG 0.541911 2.2:-19329025 MS.gene039326:CDS
GTCCAACCTCTCCCTTATGA+AGG 0.542052 2.2:+19328479 None:intergenic
TATCAACAATCCCAATTGGT+GGG 0.547759 2.2:-19328236 MS.gene039326:CDS
GGAAAGACTGGTTGGATCGG+TGG 0.548201 2.2:-19328022 MS.gene039326:CDS
CCGAAAATGTTAATGATGCC+TGG 0.549298 2.2:-19328184 MS.gene039326:CDS
GTTAATGATGCCTGGTGGGA+TGG 0.550016 2.2:-19328176 MS.gene039326:CDS
CGGGATAGTTCCGGATAAGC+CGG 0.551283 2.2:+19329121 None:intergenic
GAAATGCTCGTCATGGCGTA+TGG 0.556137 2.2:-19328694 MS.gene039326:CDS
GGATGGAGAGACATTTCAAT+GGG 0.556466 2.2:-19328159 MS.gene039326:CDS
TTCTTTCTATTCCAAAACCA+AGG 0.556902 2.2:-19327654 MS.gene039326:CDS
TGCTCGTCATGGCGTATGGT+AGG 0.557344 2.2:-19328690 MS.gene039326:CDS
CCCAACAACGTTGACACGGA+TGG 0.559674 2.2:+19327820 None:intergenic
AGTTATCCTTCATAAGGGAG+AGG 0.562307 2.2:-19328485 MS.gene039326:CDS
CGATAGACTCAGTGATGAGA+AGG 0.564861 2.2:+19328971 None:intergenic
AAAAGTTGAAGGTGTTGGGT+TGG 0.566545 2.2:-19328309 MS.gene039326:CDS
CTATTCCAAAACCAAGGCAA+TGG 0.566752 2.2:-19327648 MS.gene039326:intron
CCATAGATCAAGAACTTGAG+AGG 0.567522 2.2:+19328043 None:intergenic
ATCCAGCTGCCCCAGTAATG+AGG 0.568447 2.2:+19329166 None:intergenic
AAATGTCTCTCCATCCCACC+AGG 0.569236 2.2:+19328166 None:intergenic
GGGATGGAGAGACATTTCAA+TGG 0.570949 2.2:-19328160 MS.gene039326:CDS
GAAGACACTCCTAATTTCGC+CGG 0.574480 2.2:-19327677 MS.gene039326:CDS
AACAGTAATCGAGTTTGTCT+AGG 0.575726 2.2:+19329082 None:intergenic
GTTGCAGAGTACGGATTCGT+TGG 0.579344 2.2:+19328730 None:intergenic
ACATTGATCCAAACTTCAAG+TGG 0.579567 2.2:-19327189 MS.gene039326:CDS
CTCAAGTACTAATACTCGAA+TGG 0.579731 2.2:-19328107 MS.gene039326:CDS
TGTCTTATTAGAAGCTTGCA+AGG 0.580370 2.2:-19328857 MS.gene039326:CDS
GGAAATTGTGCGAGAAACAA+GGG 0.584272 2.2:-19327991 MS.gene039326:CDS
TATGGAAAGACTGGTTGGAT+CGG 0.590002 2.2:-19328025 MS.gene039326:CDS
TGGGGCTGAAATGCTCGTCA+TGG 0.592576 2.2:-19328701 MS.gene039326:CDS
GAGCCAATGCTCTTTGTAGG+TGG 0.595767 2.2:+19328079 None:intergenic
GTTCCACCTACAAAGAGCAT+TGG 0.596551 2.2:-19328082 MS.gene039326:CDS
TGAGGATCGTTCATCACTCG+TGG 0.597692 2.2:-19327939 MS.gene039326:CDS
ATATCAACAATCCCAATTGG+TGG 0.602384 2.2:-19328237 MS.gene039326:CDS
ATCAACAATCCCAATTGGTG+GGG 0.603337 2.2:-19328235 MS.gene039326:CDS
GCTTGAAGAAAACCATGGAC+TGG 0.603416 2.2:-19328261 MS.gene039326:CDS
TACGATGAAGCTCATCCAGA+AGG 0.603432 2.2:-19327722 MS.gene039326:CDS
GTATTAGTACTTGAGACAAA+CGG 0.603642 2.2:+19328115 None:intergenic
AAACTTCAAGTTTGTGAAGG+GGG 0.604350 2.2:-19329022 MS.gene039326:CDS
GAGAATCTCGTTGTGGCTCA+CGG 0.604501 2.2:+19327228 None:intergenic
GCTGCATTGAAAATATGAGT+TGG 0.608521 2.2:+19327896 None:intergenic
AATTGGTGGGGCGATGTGAG+TGG 0.613931 2.2:-19328223 MS.gene039326:CDS
TGATGATGAACTATGCTACC+GGG 0.618950 2.2:-19327757 MS.gene039326:CDS
ATGGCAAAGAGGAACCTAAG+AGG 0.622901 2.2:-19327277 MS.gene039326:CDS
ATATTGGAACTAAGAAGGAA+AGG 0.626669 2.2:-19328447 MS.gene039326:CDS
TTTCAATTGAGATGGCAAAG+AGG 0.627252 2.2:-19327288 MS.gene039326:CDS
ATCGTACTCGAATATGCACC+CGG 0.629832 2.2:+19327739 None:intergenic
TTTGTATTGTGAAGATGTTG+CGG 0.630976 2.2:-19328518 MS.gene039326:CDS
CATCCATGTAAGCACTGATG+AGG 0.632531 2.2:-19328812 MS.gene039326:CDS
AAGTCCCAACAACGTTGACA+CGG 0.632986 2.2:+19327816 None:intergenic
ATAGTTCCGGATAAGCCGGT+TGG 0.636641 2.2:+19329125 None:intergenic
CAAACTTCAAGTTTGTGAAG+GGG 0.641662 2.2:-19329023 MS.gene039326:CDS
ATCTTGGTGATGAAATTGCG+TGG 0.642464 2.2:+19327376 None:intergenic
GAAGAGTTTGCAAATATCGG+TGG 0.643094 2.2:+19328408 None:intergenic
ATATGGAAAAGGGCGTCTTG+AGG 0.643401 2.2:-19327957 MS.gene039326:CDS
TGATGAGAAGGTAGTTGACA+AGG 0.649249 2.2:+19328983 None:intergenic
AGAAGGCTTGAAGAAAACCA+TGG 0.651189 2.2:-19328266 MS.gene039326:CDS
TGACAATGTATGCACTCTCA+GGG 0.651558 2.2:-19327431 MS.gene039326:CDS
GGTCTATGGAGAGACAGATG+AGG 0.654888 2.2:-19328791 MS.gene039326:CDS
CATTGATCCAAACTTCAAGT+GGG 0.662099 2.2:-19327188 MS.gene039326:CDS
TTGCCGGTAATCACAACACG+TGG 0.662580 2.2:-19328658 MS.gene039326:CDS
TAGATCAAGAACTTGAGAGG+AGG 0.663040 2.2:+19328046 None:intergenic
ACAGGCCGTTTAATGATCAG+AGG 0.664360 2.2:-19328348 MS.gene039326:CDS
ACATCTCGAGAATCTCGTTG+TGG 0.664572 2.2:+19327221 None:intergenic
AAGTACTAATACTCGAATGG+TGG 0.665787 2.2:-19328104 MS.gene039326:CDS
AAATGTTAATGATGCCTGGT+GGG 0.666092 2.2:-19328180 MS.gene039326:CDS
GTACTCTGCAACAAAAGCTG+GGG 0.681769 2.2:-19328719 MS.gene039326:CDS
GAAGTAGCTGAGAAGCCTCG+TGG 0.688718 2.2:+19328752 None:intergenic
TTGGTCGGAGAGAACAACAT+GGG 0.701272 2.2:-19328290 MS.gene039326:CDS
ATGGTGATGGTTCAAATGTG+AGG 0.706627 2.2:-19328546 MS.gene039326:CDS
GTTGGTCGGAGAGAACAACA+TGG 0.719943 2.2:-19328291 MS.gene039326:CDS
TGCAGTTGTTGGAAACCACG+AGG 0.723245 2.2:-19328767 MS.gene039326:CDS
AAAATGTTAATGATGCCTGG+TGG 0.736377 2.2:-19328181 MS.gene039326:CDS
GTATTGTGAAGATGTTGCGG+AGG 0.741886 2.2:-19328515 MS.gene039326:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCATAATCATAATGAAAA+TGG + chr2.2:19328714-19328733 None:intergenic 15.0%
! ATTCCATATGAATATGGAAA+AGG - chr2.2:19328254-19328273 MS.gene039326:CDS 25.0%
! GTATAAAATTTGTAGAGAAC+AGG - chr2.2:19327856-19327875 MS.gene039326:CDS 25.0%
! TCAAAAAACAGGAATCATAA+TGG + chr2.2:19328639-19328658 None:intergenic 25.0%
! TTACAATATTGGAACTAAGA+AGG - chr2.2:19327770-19327789 MS.gene039326:CDS 25.0%
! TTCCATATGAATATGGAAAA+GGG - chr2.2:19328255-19328274 MS.gene039326:CDS 25.0%
! TTTATTGTAACGTGAAATCT+TGG + chr2.2:19328865-19328884 None:intergenic 25.0%
!! TTGAACAAGATTTGTTCAAT+AGG + chr2.2:19328685-19328704 None:intergenic 25.0%
!! TTTGAAGTTATCCTTCATAA+GGG - chr2.2:19327732-19327751 MS.gene039326:CDS 25.0%
!!! AATTTTGGAATCAACTTTTC+AGG + chr2.2:19327618-19327637 None:intergenic 25.0%
!!! ACAAATTTTATACTAGTCTC+CGG + chr2.2:19327849-19327868 None:intergenic 25.0%
!!! TTTTGAAGTTATCCTTCATA+AGG - chr2.2:19327731-19327750 MS.gene039326:CDS 25.0%
AAAAAACATCCTCATTACTG+GGG - chr2.2:19327047-19327066 MS.gene039326:CDS 30.0%
AAGTACCTCTGATCATTAAA+CGG + chr2.2:19327882-19327901 None:intergenic 30.0%
AGTACCATAAATGTTGTTCT+TGG + chr2.2:19327343-19327362 None:intergenic 30.0%
ATATTGGAACTAAGAAGGAA+AGG - chr2.2:19327775-19327794 MS.gene039326:CDS 30.0%
CAAAAAACATCCTCATTACT+GGG - chr2.2:19327046-19327065 MS.gene039326:CDS 30.0%
CTTGATAAGTGATTCTTTGA+TGG + chr2.2:19329162-19329181 None:intergenic 30.0%
GATTCCAAAATTTATCCTCT+TGG - chr2.2:19327626-19327645 MS.gene039326:intron 30.0%
GTATTAGTACTTGAGACAAA+CGG + chr2.2:19328110-19328129 None:intergenic 30.0%
GTTGGACATGTTTACAATAT+TGG - chr2.2:19327759-19327778 MS.gene039326:CDS 30.0%
TAGCATAGTTCATCATCAAA+AGG + chr2.2:19328463-19328482 None:intergenic 30.0%
TCTTCCTATTTCAATTGAGA+TGG - chr2.2:19328926-19328945 MS.gene039326:CDS 30.0%
TGAGAAGAGTTTGCAAATAT+CGG + chr2.2:19327820-19327839 None:intergenic 30.0%
TTAAACTGTGAATGTTTCTC+AGG - chr2.2:19328746-19328765 MS.gene039326:CDS 30.0%
TTCACCAAGAACAACATTTA+TGG - chr2.2:19327336-19327355 MS.gene039326:CDS 30.0%
TTCTTTCTATTCCAAAACCA+AGG - chr2.2:19328568-19328587 MS.gene039326:CDS 30.0%
TTTGCCATCTCAATTGAAAT+AGG + chr2.2:19328933-19328952 None:intergenic 30.0%
TTTGTATTGTGAAGATGTTG+CGG - chr2.2:19327704-19327723 MS.gene039326:CDS 30.0%
! AACAGGAATCATAATGGAAA+CGG + chr2.2:19328633-19328652 None:intergenic 30.0%
! ATCATTAACATTTTCGGATG+AGG + chr2.2:19328035-19328054 None:intergenic 30.0%
! ATTGCCAAGAGGATAAATTT+TGG + chr2.2:19327633-19327652 None:intergenic 30.0%
! TAGGACAACAATTTTGTAGT+CGG + chr2.2:19327124-19327143 None:intergenic 30.0%
!! AACTTTTCAGGAAACTGATT+TGG + chr2.2:19327606-19327625 None:intergenic 30.0%
!! ACTTTTCAGGAAACTGATTT+GGG + chr2.2:19327605-19327624 None:intergenic 30.0%
!!! AGTAATGAGGATGTTTTTTG+GGG + chr2.2:19327046-19327065 None:intergenic 30.0%
!!! ATTCCTGTTTTTTGAAATCG+AGG - chr2.2:19328644-19328663 MS.gene039326:CDS 30.0%
!!! CAGTAATGAGGATGTTTTTT+GGG + chr2.2:19327047-19327066 None:intergenic 30.0%
AAAATGTTAATGATGCCTGG+TGG - chr2.2:19328041-19328060 MS.gene039326:CDS 35.0%
AAATGTTAATGATGCCTGGT+GGG - chr2.2:19328042-19328061 MS.gene039326:CDS 35.0%
AACAGTAATCGAGTTTGTCT+AGG + chr2.2:19327143-19327162 None:intergenic 35.0%
AAGTACTAATACTCGAATGG+TGG - chr2.2:19328118-19328137 MS.gene039326:CDS 35.0%
AAGTTTGGAGATGATCTTGA+AGG + chr2.2:19327186-19327205 None:intergenic 35.0%
ACATTGATCCAAACTTCAAG+TGG - chr2.2:19329033-19329052 MS.gene039326:CDS 35.0%
ATATCAACAATCCCAATTGG+TGG - chr2.2:19327985-19328004 MS.gene039326:CDS 35.0%
ATTGTTGATATACCAGTCCA+TGG + chr2.2:19327976-19327995 None:intergenic 35.0%
CAAACTCTTCTCAATTGATC+CGG - chr2.2:19327827-19327846 MS.gene039326:CDS 35.0%
CAAGGGATTCCATATGAATA+TGG - chr2.2:19328248-19328267 MS.gene039326:CDS 35.0%
CATTGATCCAAACTTCAAGT+GGG - chr2.2:19329034-19329053 MS.gene039326:CDS 35.0%
CCAAAAAACATCCTCATTAC+TGG - chr2.2:19327045-19327064 MS.gene039326:CDS 35.0%
CTCAAGTACTAATACTCGAA+TGG - chr2.2:19328115-19328134 MS.gene039326:CDS 35.0%
CTTTGATGGAAAGCAATTCT+GGG + chr2.2:19329148-19329167 None:intergenic 35.0%
GCTGCATTGAAAATATGAGT+TGG + chr2.2:19328329-19328348 None:intergenic 35.0%
GGTATATCAACAATCCCAAT+TGG - chr2.2:19327982-19328001 MS.gene039326:CDS 35.0%
TATCAACAATCCCAATTGGT+GGG - chr2.2:19327986-19328005 MS.gene039326:CDS 35.0%
TCTTGACGATCAAAAGTTGA+AGG - chr2.2:19327902-19327921 MS.gene039326:CDS 35.0%
TCTTTGATGGAAAGCAATTC+TGG + chr2.2:19329149-19329168 None:intergenic 35.0%
TGCAAGAAGCAACAATGAAA+TGG - chr2.2:19329097-19329116 MS.gene039326:CDS 35.0%
TGGGAACTCATTCTTCAATT+TGG + chr2.2:19329129-19329148 None:intergenic 35.0%
TGTCCTCGATTTCAAAAAAC+AGG + chr2.2:19328650-19328669 None:intergenic 35.0%
TTCTTGATCTATGGAAAGAC+TGG - chr2.2:19328188-19328207 MS.gene039326:CDS 35.0%
TTGCTTAGGTCAGATGAAAT+CGG + chr2.2:19328825-19328844 None:intergenic 35.0%
TTTCAATTGAGATGGCAAAG+AGG - chr2.2:19328934-19328953 MS.gene039326:CDS 35.0%
TTTGAACCATCACCATGAAT+CGG + chr2.2:19327672-19327691 None:intergenic 35.0%
! AAACTTCAAGTTTGTGAAGG+GGG - chr2.2:19327200-19327219 MS.gene039326:CDS 35.0%
! ACTCATATTTTCAATGCAGC+AGG - chr2.2:19328329-19328348 MS.gene039326:CDS 35.0%
! AGGACAACAATTTTGTAGTC+GGG + chr2.2:19327123-19327142 None:intergenic 35.0%
! CAAACTTCAAGTTTGTGAAG+GGG - chr2.2:19327199-19327218 MS.gene039326:CDS 35.0%
! CATGGATGAATCTTTTGATC+TGG + chr2.2:19327398-19327417 None:intergenic 35.0%
! CCAAACTTCAAGTTTGTGAA+GGG - chr2.2:19327198-19327217 MS.gene039326:CDS 35.0%
! CCAGGCATCATTAACATTTT+CGG + chr2.2:19328041-19328060 None:intergenic 35.0%
! TCCAAACTTCAAGTTTGTGA+AGG - chr2.2:19327197-19327216 MS.gene039326:CDS 35.0%
! TGTCTTATTAGAAGCTTGCA+AGG - chr2.2:19327365-19327384 MS.gene039326:CDS 35.0%
!! GATCAAAAGTTGAAGGTGTT+GGG - chr2.2:19327909-19327928 MS.gene039326:CDS 35.0%
!! TTGATGATGAACTATGCTAC+CGG - chr2.2:19328464-19328483 MS.gene039326:CDS 35.0%
!!! CCAGTAATGAGGATGTTTTT+TGG + chr2.2:19327048-19327067 None:intergenic 35.0%
!!! GGTTTTGGAATAGAAAGAAC+CGG + chr2.2:19328567-19328586 None:intergenic 35.0%
AAGTTAGCCCACTTGAAGTT+TGG + chr2.2:19329044-19329063 None:intergenic 40.0%
ACACGTGGAAACAATGTCTA+TGG - chr2.2:19327579-19327598 MS.gene039326:intron 40.0%
AGAAGGCTTGAAGAAAACCA+TGG - chr2.2:19327956-19327975 MS.gene039326:CDS 40.0%
AGTTATCCTTCATAAGGGAG+AGG - chr2.2:19327737-19327756 MS.gene039326:CDS 40.0%
ATCAACAATCCCAATTGGTG+GGG - chr2.2:19327987-19328006 MS.gene039326:CDS 40.0%
ATGACAATGTATGCACTCTC+AGG - chr2.2:19328790-19328809 MS.gene039326:CDS 40.0%
CCATAGATCAAGAACTTGAG+AGG + chr2.2:19328182-19328201 None:intergenic 40.0%
CCCTTCACAAACTTGAAGTT+TGG + chr2.2:19327201-19327220 None:intergenic 40.0%
CCGAAAATGTTAATGATGCC+TGG - chr2.2:19328038-19328057 MS.gene039326:CDS 40.0%
CCTCTCAAGTTCTTGATCTA+TGG - chr2.2:19328179-19328198 MS.gene039326:CDS 40.0%
CGTTGTTGGGACTTTAACAT+TGG - chr2.2:19328415-19328434 MS.gene039326:CDS 40.0%
CTATTCCAAAACCAAGGCAA+TGG - chr2.2:19328574-19328593 MS.gene039326:CDS 40.0%
CTGGTAGACCTAATGTTGAT+TGG - chr2.2:19328357-19328376 MS.gene039326:CDS 40.0%
GAAGAGTTTGCAAATATCGG+TGG + chr2.2:19327817-19327836 None:intergenic 40.0%
GAGATGATCTTGAAGGAATG+AGG + chr2.2:19327179-19327198 None:intergenic 40.0%
GATTCGCACCAATCAACATT+AGG + chr2.2:19328368-19328387 None:intergenic 40.0%
GGAAAAGTTCTTCCGATTCA+TGG - chr2.2:19327657-19327676 MS.gene039326:CDS 40.0%
GGAAATTGTGCGAGAAACAA+GGG - chr2.2:19328231-19328250 MS.gene039326:CDS 40.0%
GGATGGAGAGACATTTCAAT+GGG - chr2.2:19328063-19328082 MS.gene039326:CDS 40.0%
TAGAAAGAACCGGCGAAATT+AGG + chr2.2:19328557-19328576 None:intergenic 40.0%
TAGATCAAGAACTTGAGAGG+AGG + chr2.2:19328179-19328198 None:intergenic 40.0%
TCCAAAACAGTCATGCTGTT+TGG + chr2.2:19328900-19328919 None:intergenic 40.0%
TCTTGCAGCAACTATCACTT+TGG + chr2.2:19329084-19329103 None:intergenic 40.0%
TGAAGTTCCAGATACCTCTT+AGG + chr2.2:19328962-19328981 None:intergenic 40.0%
TGACAATGTATGCACTCTCA+GGG - chr2.2:19328791-19328810 MS.gene039326:CDS 40.0%
TGATCTATGGAAAGACTGGT+TGG - chr2.2:19328192-19328211 MS.gene039326:CDS 40.0%
TGATGAGAAGGTAGTTGACA+AGG + chr2.2:19327242-19327261 None:intergenic 40.0%
TTAGAAGCTTGCAAGGTAAC+TGG - chr2.2:19327372-19327391 MS.gene039326:CDS 40.0%
TTTATCCTCTTGGCAATGCA+AGG - chr2.2:19327636-19327655 MS.gene039326:intron 40.0%
TTTCCACGTGTTGTGATTAC+CGG + chr2.2:19327570-19327589 None:intergenic 40.0%
! ACTCATGTCGACAACTCTTT+TGG - chr2.2:19327300-19327319 MS.gene039326:CDS 40.0%
! ATCTGGAACTTCACAAATCC+TGG - chr2.2:19328969-19328988 MS.gene039326:CDS 40.0%
! CGATCAAAAGTTGAAGGTGT+TGG - chr2.2:19327908-19327927 MS.gene039326:CDS 40.0%
! CGCCCTTTTCCATATTCATA+TGG + chr2.2:19328260-19328279 None:intergenic 40.0%
! TATGGAAAGACTGGTTGGAT+CGG - chr2.2:19328197-19328216 MS.gene039326:CDS 40.0%
! TCCAAACAGCATGACTGTTT+TGG - chr2.2:19328896-19328915 MS.gene039326:CDS 40.0%
! TGAAATTGCGTGGATTGCTT+AGG + chr2.2:19328839-19328858 None:intergenic 40.0%
! TGATGATGAACTATGCTACC+GGG - chr2.2:19328465-19328484 MS.gene039326:CDS 40.0%
! TTTTGTAGTCGGGATAGTTC+CGG + chr2.2:19327113-19327132 None:intergenic 40.0%
!! AAAAGTTGAAGGTGTTGGGT+TGG - chr2.2:19327913-19327932 MS.gene039326:CDS 40.0%
!! ATCTTGGTGATGAAATTGCG+TGG + chr2.2:19328849-19328868 None:intergenic 40.0%
!! ATGGTGATGGTTCAAATGTG+AGG - chr2.2:19327676-19327695 MS.gene039326:CDS 40.0%
AAGTCCCAACAACGTTGACA+CGG + chr2.2:19328409-19328428 None:intergenic 45.0%
ACAGATGAGGATGCAGTTGT+TGG - chr2.2:19327444-19327463 MS.gene039326:CDS 45.0%
ACAGGCCGTTTAATGATCAG+AGG - chr2.2:19327874-19327893 MS.gene039326:CDS 45.0%
ACATCTCGAGAATCTCGTTG+TGG + chr2.2:19329004-19329023 None:intergenic 45.0%
AGACCTCATCAGTGCTTACA+TGG + chr2.2:19327416-19327435 None:intergenic 45.0%
ATCCAGAAGGTTCAGGCATT+GGG - chr2.2:19328513-19328532 MS.gene039326:CDS 45.0%
ATCCTTCATAAGGGAGAGGT+TGG - chr2.2:19327741-19327760 MS.gene039326:CDS 45.0%
ATCGTACTCGAATATGCACC+CGG + chr2.2:19328486-19328505 None:intergenic 45.0%
ATGGCAAAGAGGAACCTAAG+AGG - chr2.2:19328945-19328964 MS.gene039326:CDS 45.0%
ATGGCGTATGGTAGGTCTTA+TGG - chr2.2:19327540-19327559 MS.gene039326:intron 45.0%
CGATAGACTCAGTGATGAGA+AGG + chr2.2:19327254-19327273 None:intergenic 45.0%
CGTACTCTGCAACAAAAGCT+GGG - chr2.2:19327502-19327521 MS.gene039326:intron 45.0%
GAAGACACTCCTAATTTCGC+CGG - chr2.2:19328545-19328564 MS.gene039326:CDS 45.0%
GAAGAGCCAATGCTCTTTGT+AGG + chr2.2:19328149-19328168 None:intergenic 45.0%
GAGAGAACAACATGGGAAGA+AGG - chr2.2:19327939-19327958 MS.gene039326:CDS 45.0%
GCTTGAAGAAAACCATGGAC+TGG - chr2.2:19327961-19327980 MS.gene039326:CDS 45.0%
GGGAAATTGTGCGAGAAACA+AGG - chr2.2:19328230-19328249 MS.gene039326:CDS 45.0%
GGGATGGAGAGACATTTCAA+TGG - chr2.2:19328062-19328081 MS.gene039326:CDS 45.0%
GTACTCTGCAACAAAAGCTG+GGG - chr2.2:19327503-19327522 MS.gene039326:intron 45.0%
GTATTGTGAAGATGTTGCGG+AGG - chr2.2:19327707-19327726 MS.gene039326:CDS 45.0%
GTTCTTCCGATTCATGGTGA+TGG - chr2.2:19327663-19327682 MS.gene039326:CDS 45.0%
TACGATGAAGCTCATCCAGA+AGG - chr2.2:19328500-19328519 MS.gene039326:CDS 45.0%
TTGGTCGGAGAGAACAACAT+GGG - chr2.2:19327932-19327951 MS.gene039326:CDS 45.0%
! CCAGCTTTTGTTGCAGAGTA+CGG + chr2.2:19327504-19327523 None:intergenic 45.0%
! CTTTTCCTTGCATTGCCAAG+AGG + chr2.2:19327644-19327663 None:intergenic 45.0%
! GCTTACCATTGCCTTGGTTT+TGG + chr2.2:19328582-19328601 None:intergenic 45.0%
! GTTCCACCTACAAAGAGCAT+TGG - chr2.2:19328140-19328159 MS.gene039326:CDS 45.0%
! TAGCTAGCTTACCATTGCCT+TGG + chr2.2:19328588-19328607 None:intergenic 45.0%
! TGGTAGGTCTTATGGATTGC+CGG - chr2.2:19327548-19327567 MS.gene039326:intron 45.0%
!! AGAGGAACCTAAGAGGTATC+TGG - chr2.2:19328952-19328971 MS.gene039326:CDS 45.0%
!! AGGTTCAGGCATTGGGTTTA+AGG - chr2.2:19328520-19328539 MS.gene039326:CDS 45.0%
!! ATATGGAAAAGGGCGTCTTG+AGG - chr2.2:19328265-19328284 MS.gene039326:CDS 45.0%
!! CATCCATGTAAGCACTGATG+AGG - chr2.2:19327410-19327429 MS.gene039326:CDS 45.0%
!! GTAAGCACTGATGAGGTCTA+TGG - chr2.2:19327417-19327436 MS.gene039326:CDS 45.0%
AAATGTCTCTCCATCCCACC+AGG + chr2.2:19328059-19328078 None:intergenic 50.0%
AACCCAATGCCTGAACCTTC+TGG + chr2.2:19328518-19328537 None:intergenic 50.0%
ACCATCCGTGTCAACGTTGT+TGG - chr2.2:19328401-19328420 MS.gene039326:CDS 50.0%
ATAGTTCCGGATAAGCCGGT+TGG + chr2.2:19327100-19327119 None:intergenic 50.0%
CATCCAGAAGGTTCAGGCAT+TGG - chr2.2:19328512-19328531 MS.gene039326:CDS 50.0%
CCATCCGTGTCAACGTTGTT+GGG - chr2.2:19328402-19328421 MS.gene039326:CDS 50.0%
CCGTACTCTGCAACAAAAGC+TGG - chr2.2:19327501-19327520 MS.gene039326:intron 50.0%
GAAATGCTCGTCATGGCGTA+TGG - chr2.2:19327528-19327547 MS.gene039326:intron 50.0%
GAAGCTCATCCAGAAGGTTC+AGG - chr2.2:19328506-19328525 MS.gene039326:CDS 50.0%
GAGAATCTCGTTGTGGCTCA+CGG + chr2.2:19328997-19329016 None:intergenic 50.0%
GAGCCAATGCTCTTTGTAGG+TGG + chr2.2:19328146-19328165 None:intergenic 50.0%
GGTCTATGGAGAGACAGATG+AGG - chr2.2:19327431-19327450 MS.gene039326:CDS 50.0%
GTCCAACCTCTCCCTTATGA+AGG + chr2.2:19327746-19327765 None:intergenic 50.0%
GTTAATGATGCCTGGTGGGA+TGG - chr2.2:19328046-19328065 MS.gene039326:CDS 50.0%
GTTGCAGAGTACGGATTCGT+TGG + chr2.2:19327495-19327514 None:intergenic 50.0%
GTTGGTCGGAGAGAACAACA+TGG - chr2.2:19327931-19327950 MS.gene039326:CDS 50.0%
TGAGGATCGTTCATCACTCG+TGG - chr2.2:19328283-19328302 MS.gene039326:CDS 50.0%
TGCAGTTGTTGGAAACCACG+AGG - chr2.2:19327455-19327474 MS.gene039326:CDS 50.0%
TTCAATGCAGCAGGTGTGAC+TGG - chr2.2:19328338-19328357 MS.gene039326:CDS 50.0%
TTGCCGGTAATCACAACACG+TGG - chr2.2:19327564-19327583 MS.gene039326:intron 50.0%
TTGCGTCTCATGTTGCCAAC+CGG - chr2.2:19327082-19327101 MS.gene039326:CDS 50.0%
! ATGTTGCCAACCGGCTTATC+CGG - chr2.2:19327091-19327110 MS.gene039326:CDS 50.0%
!! GTTGAAGGTGTTGGGTTGGT+CGG - chr2.2:19327917-19327936 MS.gene039326:CDS 50.0%
!! GTTGGATCGGTGGTTTGCTT+GGG - chr2.2:19328210-19328229 MS.gene039326:CDS 50.0%
AATTGGTGGGGCGATGTGAG+TGG - chr2.2:19327999-19328018 MS.gene039326:CDS 55.0%
ACTCACATCGCCCCACCAAT+TGG + chr2.2:19328000-19328019 None:intergenic 55.0%
ATCCAGCTGCCCCAGTAATG+AGG + chr2.2:19327059-19327078 None:intergenic 55.0%
ATCCTCATTACTGGGGCAGC+TGG - chr2.2:19327054-19327073 MS.gene039326:CDS 55.0%
CCCAACAACGTTGACACGGA+TGG + chr2.2:19328405-19328424 None:intergenic 55.0%
CGGGATAGTTCCGGATAAGC+CGG + chr2.2:19327104-19327123 None:intergenic 55.0%
CTCACATCGCCCCACCAATT+GGG + chr2.2:19327999-19328018 None:intergenic 55.0%
GAAGTAGCTGAGAAGCCTCG+TGG + chr2.2:19327473-19327492 None:intergenic 55.0%
TGCTCGTCATGGCGTATGGT+AGG - chr2.2:19327532-19327551 MS.gene039326:intron 55.0%
TGGGGCTGAAATGCTCGTCA+TGG - chr2.2:19327521-19327540 MS.gene039326:intron 55.0%
! GGAAAGACTGGTTGGATCGG+TGG - chr2.2:19328200-19328219 MS.gene039326:CDS 55.0%
!! GGTTGGATCGGTGGTTTGCT+TGG - chr2.2:19328209-19328228 MS.gene039326:CDS 55.0%
TCGTTGTGGCTCACGGCGCC+AGG + chr2.2:19328990-19329009 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 19327030 19329214 19327030 ID=MS.gene039326
chr2.2 mRNA 19327030 19329214 19327030 ID=MS.gene039326.t1;Parent=MS.gene039326
chr2.2 exon 19327649 19329214 19327649 ID=MS.gene039326.t1.exon1;Parent=MS.gene039326.t1
chr2.2 CDS 19327649 19329214 19327649 ID=cds.MS.gene039326.t1;Parent=MS.gene039326.t1
chr2.2 exon 19327030 19327476 19327030 ID=MS.gene039326.t1.exon2;Parent=MS.gene039326.t1
chr2.2 CDS 19327030 19327476 19327030 ID=cds.MS.gene039326.t1;Parent=MS.gene039326.t1
Gene Sequence

>MS.gene039326

ATGGCAACGCACACCCCAAAAAACATCCTCATTACTGGGGCAGCTGGATTCATTGCGTCTCATGTTGCCAACCGGCTTATCCGGAACTATCCCGACTACAAAATTGTTGTCCTAGACAAACTCGATTACTGTTCTAATCTGAAGAACCTCATTCCTTCAAGATCATCTCCAAACTTCAAGTTTGTGAAGGGGGACATTGAAAGTGCTGACCTTGTCAACTACCTTCTCATCACTGAGTCTATCGACACAATTATGCACTTTGCTGCTCAAACTCATGTCGACAACTCTTTTGGTAACAGCTTTGAGTTCACCAAGAACAACATTTATGGTACTCATGTCTTATTAGAAGCTTGCAAGGTAACTGGCCAGATCAAAAGATTCATCCATGTAAGCACTGATGAGGTCTATGGAGAGACAGATGAGGATGCAGTTGTTGGAAACCACGAGGCTTCTCAGCTACTTCCAACGAATCCGTACTCTGCAACAAAAGCTGGGGCTGAAATGCTCGTCATGGCGTATGGTAGGTCTTATGGATTGCCGGTAATCACAACACGTGGAAACAATGTCTATGGCCCAAATCAGTTTCCTGAAAAGTTGATTCCAAAATTTATCCTCTTGGCAATGCAAGGAAAAGTTCTTCCGATTCATGGTGATGGTTCAAATGTGAGGAGTTATTTGTATTGTGAAGATGTTGCGGAGGCTTTTGAAGTTATCCTTCATAAGGGAGAGGTTGGACATGTTTACAATATTGGAACTAAGAAGGAAAGGAGAGTTATTGATGTAGCCACCGATATTTGCAAACTCTTCTCAATTGATCCGGAGACTAGTATAAAATTTGTAGAGAACAGGCCGTTTAATGATCAGAGGTACTTTCTTGACGATCAAAAGTTGAAGGTGTTGGGTTGGTCGGAGAGAACAACATGGGAAGAAGGCTTGAAGAAAACCATGGACTGGTATATCAACAATCCCAATTGGTGGGGCGATGTGAGTGGTGCATTGCTTCCTCATCCGAAAATGTTAATGATGCCTGGTGGGATGGAGAGACATTTCAATGGGTCTGAAGAAGAAAATTCTGCACCGTTTGTCTCAAGTACTAATACTCGAATGGTGGTTCCACCTACAAAGAGCATTGGCTCTTCACAGAAACCTCCTCTCAAGTTCTTGATCTATGGAAAGACTGGTTGGATCGGTGGTTTGCTTGGGAAATTGTGCGAGAAACAAGGGATTCCATATGAATATGGAAAAGGGCGTCTTGAGGATCGTTCATCACTCGTGGCTGATATTCAGAACGTGAAGCCAACTCATATTTTCAATGCAGCAGGTGTGACTGGTAGACCTAATGTTGATTGGTGCGAATCTCATAAAACTGAAACCATCCGTGTCAACGTTGTTGGGACTTTAACATTGGCTGATGTAAGCAGAGAGCATAACCTTTTGATGATGAACTATGCTACCGGGTGCATATTCGAGTACGATGAAGCTCATCCAGAAGGTTCAGGCATTGGGTTTAAGGAAGAAGACACTCCTAATTTCGCCGGTTCTTTCTATTCCAAAACCAAGGCAATGGTAAGCTAGCTATAACACAATTTATACTTTTCTTCCGTTTCCATTATGATTCCTGTTTTTTGAAATCGAGGACACGATAGTACGAGCCTATTGAACAAATCTTGTTCAAGTAAGACCATTTTCATTATGATTATGAATATTTCTTAATAATTAAACTGTGAATGTTTCTCAGGTTGAAGAGCTCTTGAAAGACTATGACAATGTATGCACTCTCAGGGTTCGCATGCCGATTTCATCTGACCTAAGCAATCCACGCAATTTCATCACCAAGATTTCACGTTACAATAAAGTAGTCAACATTCCAAACAGCATGACTGTTTTGGATGAACTTCTTCCTATTTCAATTGAGATGGCAAAGAGGAACCTAAGAGGTATCTGGAACTTCACAAATCCTGGCGCCGTGAGCCACAACGAGATTCTCGAGATGTACAGAGACTACATTGATCCAAACTTCAAGTGGGCTAACTTCACACTTGAAGAACAAGCCAAAGTGATAGTTGCTGCAAGAAGCAACAATGAAATGGATGCATCCAAATTGAAGAATGAGTTCCCAGAATTGCTTTCCATCAAAGAATCACTTATCAAGTACGTCTTTGAGCTAAACAAGAAAAGTGCTTAA
Protein sequence

>MS.gene039326.t1

MATHTPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLIPSRSSPNFKFVKGDIESADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKVLPIHGDGSNVRSYLYCEDVAEAFEVILHKGEVGHVYNIGTKKERRVIDVATDICKLFSIDPETSIKFVENRPFNDQRYFLDDQKLKVLGWSERTTWEEGLKKTMDWYINNPNWWGDVSGALLPHPKMLMMPGGMERHFNGSEEENSAPFVSSTNTRMVVPPTKSIGSSQKPPLKFLIYGKTGWIGGLLGKLCEKQGIPYEYGKGRLEDRSSLVADIQNVKPTHIFNAAGVTGRPNVDWCESHKTETIRVNVVGTLTLADVSREHNLLMMNYATGCIFEYDEAHPEGSGIGFKEEDTPNFAGSFYSKTKAMVEELLKDYDNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGAVSHNEILEMYRDYIDPNFKWANFTLEEQAKVIVAARSNNEMDASKLKNEFPELLSIKESLIKYVFELNKKSA