Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039967.t1 | XP_003601037.1 | 99.2 | 389 | 3 | 0 | 1 | 389 | 1 | 389 | 2.30E-222 | 781.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039967.t1 | Q42967 | 81.0 | 385 | 69 | 1 | 9 | 389 | 7 | 391 | 2.0e-182 | 639.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039967.t1 | B7FIJ3 | 99.2 | 389 | 3 | 0 | 1 | 389 | 1 | 389 | 1.6e-222 | 781.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene026855 | MS.gene039967 | PPI |
| MS.gene060193 | MS.gene039967 | PPI |
| MS.gene63745 | MS.gene039967 | PPI |
| MS.gene060588 | MS.gene039967 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039967.t1 | MTR_3g072330 | 99.229 | 389 | 3 | 0 | 1 | 389 | 1 | 389 | 0.0 | 792 |
| MS.gene039967.t1 | MTR_2g076340 | 55.556 | 342 | 151 | 1 | 48 | 389 | 55 | 395 | 3.85e-137 | 397 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039967.t1 | AT2G40490 | 77.926 | 376 | 80 | 2 | 15 | 389 | 21 | 394 | 0.0 | 609 |
| MS.gene039967.t1 | AT3G14930 | 53.026 | 347 | 162 | 1 | 43 | 389 | 54 | 399 | 1.58e-138 | 401 |
| MS.gene039967.t1 | AT3G14930 | 53.026 | 347 | 162 | 1 | 43 | 389 | 54 | 399 | 1.58e-138 | 401 |
| MS.gene039967.t1 | AT3G14930 | 54.180 | 323 | 147 | 1 | 67 | 389 | 1 | 322 | 1.13e-129 | 376 |
Find 104 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATTCTTACACCACTTTC+TGG | 0.157805 | 3.1:-59175571 | MS.gene039967:CDS |
| ATTCCATTTGACATTGTAAA+AGG | 0.206118 | 3.1:-59175541 | MS.gene039967:CDS |
| AATGGATTTGAATGGGTAAA+AGG | 0.250908 | 3.1:+59176799 | None:intergenic |
| TCAATTATTTGCTTCAAGTA+TGG | 0.290572 | 3.1:+59172654 | None:intergenic |
| ACTTGGCCTGCGGAGTGAAC+TGG | 0.306505 | 3.1:+59175496 | None:intergenic |
| TCCATTCAATGTTCTCTTCC+AGG | 0.315235 | 3.1:-59176782 | MS.gene039967:intron |
| CTTGGATTGGACGGTTGATA+TGG | 0.339881 | 3.1:-59172529 | MS.gene039967:CDS |
| AACTTAGTATTTGATTCCTT+TGG | 0.358951 | 3.1:+59172302 | None:intergenic |
| GTTGATCCTGGTGTTCTGTT+TGG | 0.376386 | 3.1:-59172459 | MS.gene039967:CDS |
| TTTCTCTAAAATAAAGAGAT+TGG | 0.380766 | 3.1:-59173441 | MS.gene039967:CDS |
| ATCCTCTATGCAAGTGGATC+AGG | 0.396912 | 3.1:-59172597 | MS.gene039967:CDS |
| CGATGCCGTGACCAAGGTTC+AGG | 0.397386 | 3.1:+59172370 | None:intergenic |
| TTGATATGGCTGACGGTAGA+AGG | 0.402561 | 3.1:-59172515 | MS.gene039967:CDS |
| GAACATTGAATGGATTTGAA+TGG | 0.412640 | 3.1:+59176791 | None:intergenic |
| TAGAGGATAAGAGGGAGTTC+TGG | 0.412953 | 3.1:+59172612 | None:intergenic |
| GGCTGACGGTAGAAGGAGAT+TGG | 0.418136 | 3.1:-59172508 | MS.gene039967:CDS |
| CCACTTGCATAGAGGATAAG+AGG | 0.422510 | 3.1:+59172603 | None:intergenic |
| CTGTACAGATATTCGATTCA+TGG | 0.424244 | 3.1:-59172719 | MS.gene039967:CDS |
| AACATTGAATGGATTTGAAT+GGG | 0.425887 | 3.1:+59176792 | None:intergenic |
| ACATACGACGCCAGGGTAAA+CGG | 0.433300 | 3.1:+59173488 | None:intergenic |
| GATAATAAATCTGCAGTCCT+TGG | 0.434879 | 3.1:-59173524 | MS.gene039967:CDS |
| TTACCTTGGATAGCTACATT+TGG | 0.446082 | 3.1:+59172483 | None:intergenic |
| GAGAGTTATATTACCCCATC+AGG | 0.452559 | 3.1:+59175724 | None:intergenic |
| GCTTGTCTCATAAGCCAAAC+AGG | 0.452792 | 3.1:+59176498 | None:intergenic |
| ATGTCGAAAGACCTCCTGTT+TGG | 0.460725 | 3.1:-59176512 | MS.gene039967:CDS |
| CTTGGCCTGCGGAGTGAACT+GGG | 0.461901 | 3.1:+59175497 | None:intergenic |
| CTTGCGCTCCATTGTCAGCT+TGG | 0.463609 | 3.1:+59172742 | None:intergenic |
| CAGATCTTTCCCGGAATGAC+GGG | 0.470670 | 3.1:+59175800 | None:intergenic |
| AACGTATGGAACTGATTCCT+CGG | 0.471977 | 3.1:+59175450 | None:intergenic |
| CTGGCGTCGTATGTGGTTGA+AGG | 0.472993 | 3.1:-59173479 | MS.gene039967:CDS |
| GTTTACCCTGGCGTCGTATG+TGG | 0.473968 | 3.1:-59173486 | MS.gene039967:CDS |
| CGAACTGCATTGAGCAAAAG+AGG | 0.483179 | 3.1:+59176543 | None:intergenic |
| CACGATACCGTGAGAAAGGC+TGG | 0.489317 | 3.1:-59172408 | MS.gene039967:CDS |
| AAATGTGCTACATTCTCCTC+AGG | 0.494178 | 3.1:+59172336 | None:intergenic |
| CTTGGTCACGGCATCGTAGT+AGG | 0.496571 | 3.1:-59172363 | MS.gene039967:CDS |
| GGAATATTCATTCCAGAAAG+TGG | 0.500259 | 3.1:+59175559 | None:intergenic |
| GTTTGGCTTATGAGACAAGC+TGG | 0.502036 | 3.1:-59176495 | MS.gene039967:CDS |
| ACCTGGAAGAGAACATTGAA+TGG | 0.506655 | 3.1:+59176781 | None:intergenic |
| CTTCAACCACATACGACGCC+AGG | 0.512222 | 3.1:+59173480 | None:intergenic |
| CGGTGTGGATGTTGTAAGCT+TGG | 0.514049 | 3.1:-59172547 | MS.gene039967:CDS |
| AATTTCATTGCAACCGTGGA+AGG | 0.514515 | 3.1:-59175755 | MS.gene039967:CDS |
| CTGAATCGTTCAAAATCCAC+TGG | 0.515548 | 3.1:+59172681 | None:intergenic |
| TGTGGGTGCTCCGTTTACCC+TGG | 0.516470 | 3.1:-59173498 | MS.gene039967:CDS |
| CCCTCTACCAGCCTTTCTCA+CGG | 0.518645 | 3.1:+59172401 | None:intergenic |
| GCAAAAGTTTACAACATCAA+TGG | 0.520601 | 3.1:-59172781 | MS.gene039967:CDS |
| ATTTGACATTGTAAAAGGCA+AGG | 0.524512 | 3.1:-59175536 | MS.gene039967:CDS |
| GCTGACGGTAGAAGGAGATT+GGG | 0.526942 | 3.1:-59172507 | MS.gene039967:CDS |
| GATACACGATACCGTGAGAA+AGG | 0.528071 | 3.1:-59172412 | MS.gene039967:CDS |
| ACCGTGAGAAAGGCTGGTAG+AGG | 0.529078 | 3.1:-59172402 | MS.gene039967:CDS |
| TGGATGTTGTAAGCTTGGAT+TGG | 0.533084 | 3.1:-59172542 | MS.gene039967:CDS |
| ATCCAAGGTAATGTTGATCC+TGG | 0.536465 | 3.1:-59172471 | MS.gene039967:CDS |
| ATGGATTTGAATGGGTAAAA+GGG | 0.537828 | 3.1:+59176800 | None:intergenic |
| TCAGATCTTTCCCGGAATGA+CGG | 0.538694 | 3.1:+59175799 | None:intergenic |
| GTTATATTACCCCATCAGGC+TGG | 0.542394 | 3.1:+59175728 | None:intergenic |
| ATCTGAAAACGTTGATCTTG+TGG | 0.544982 | 3.1:-59175782 | MS.gene039967:CDS |
| CACCAGGATCAACATTACCT+TGG | 0.550632 | 3.1:+59172469 | None:intergenic |
| TGTACAGATATTCGATTCAT+GGG | 0.557652 | 3.1:-59172718 | MS.gene039967:CDS |
| TTTGACCCAGTTCACTCCGC+AGG | 0.557974 | 3.1:-59175502 | MS.gene039967:CDS |
| CACGGTATCGTGTATCCTAT+CGG | 0.559155 | 3.1:+59172419 | None:intergenic |
| CCTCTTATCCTCTATGCAAG+TGG | 0.559600 | 3.1:-59172603 | MS.gene039967:CDS |
| CTTGAGAGAATAGCATTGAC+CGG | 0.561094 | 3.1:-59172567 | MS.gene039967:CDS |
| GATAGTGCTTCACCAACGTA+TGG | 0.570324 | 3.1:+59175436 | None:intergenic |
| CTCCTGATCCACTTGCATAG+AGG | 0.573987 | 3.1:+59172595 | None:intergenic |
| GCTAACTACACCGCAAAACA+TGG | 0.575089 | 3.1:+59176868 | None:intergenic |
| TTTGACATTGTAAAAGGCAA+GGG | 0.580301 | 3.1:-59175535 | MS.gene039967:CDS |
| GTGAACTGGGTCAAATATGA+CGG | 0.581289 | 3.1:+59175510 | None:intergenic |
| CACTTGATCAACTTGGCCTG+CGG | 0.582378 | 3.1:+59175486 | None:intergenic |
| TTTGAATGGGTAAAAGGGTG+TGG | 0.582685 | 3.1:+59176805 | None:intergenic |
| ACGTATGGAACTGATTCCTC+GGG | 0.583383 | 3.1:+59175451 | None:intergenic |
| CTCTATGCAAGTGGATCAGG+AGG | 0.584281 | 3.1:-59172594 | MS.gene039967:CDS |
| GGACCAAATGTAGCTATCCA+AGG | 0.588652 | 3.1:-59172486 | MS.gene039967:CDS |
| TGTTGTAAGCTTGGATTGGA+CGG | 0.589620 | 3.1:-59172538 | MS.gene039967:CDS |
| ACTCCCTCACTTGATCAACT+TGG | 0.589624 | 3.1:+59175479 | None:intergenic |
| ATTGGCATTCTCTGAACCAA+AGG | 0.592895 | 3.1:-59173423 | MS.gene039967:intron |
| TGAACTGGGTCAAATATGAC+GGG | 0.600113 | 3.1:+59175511 | None:intergenic |
| CACTTGCATAGAGGATAAGA+GGG | 0.600254 | 3.1:+59172604 | None:intergenic |
| GGGAAACATATCCTGAACCT+TGG | 0.602324 | 3.1:-59172381 | MS.gene039967:CDS |
| CGAAAGAGCTGATTACCGAT+AGG | 0.604713 | 3.1:-59172434 | MS.gene039967:CDS |
| TTTGGCTTATGAGACAAGCT+GGG | 0.604715 | 3.1:-59176494 | MS.gene039967:CDS |
| TTCGATCCAAACAGAACACC+AGG | 0.613403 | 3.1:+59172453 | None:intergenic |
| ACAAGCTGGGAGGTACATGA+AGG | 0.615658 | 3.1:-59176481 | MS.gene039967:intron |
| GGCAACAGAGCTTAGTCCAG+TGG | 0.616272 | 3.1:-59172697 | MS.gene039967:CDS |
| CAGGCCAAGTTGATCAAGTG+AGG | 0.617997 | 3.1:-59175483 | MS.gene039967:CDS |
| CTACTACGATGCCGTGACCA+AGG | 0.620641 | 3.1:+59172364 | None:intergenic |
| GGATAAGAGGGAGTTCTGGA+TGG | 0.622692 | 3.1:+59172616 | None:intergenic |
| TCAGGCTGGAAAACCTTCCA+CGG | 0.624106 | 3.1:+59175742 | None:intergenic |
| ATACAATACCAAGCTGACAA+TGG | 0.630738 | 3.1:-59172750 | MS.gene039967:CDS |
| TTGAAATTTCATTGCAACCG+TGG | 0.633557 | 3.1:-59175759 | MS.gene039967:CDS |
| TTCAACCACATACGACGCCA+GGG | 0.634894 | 3.1:+59173481 | None:intergenic |
| GCGTCGTATGTGGTTGAAGG+CGG | 0.638298 | 3.1:-59173476 | MS.gene039967:CDS |
| ATTGAGCAAAAGAGGTTCTG+TGG | 0.641274 | 3.1:+59176551 | None:intergenic |
| CCGTGAGAAAGGCTGGTAGA+GGG | 0.642675 | 3.1:-59172401 | MS.gene039967:CDS |
| ATGGGTAAAAGGGTGTGGTG+TGG | 0.645380 | 3.1:+59176810 | None:intergenic |
| AGGCCAAGTTGATCAAGTGA+GGG | 0.645695 | 3.1:-59175482 | MS.gene039967:CDS |
| AGTGAGGGAGTTTATTCCCG+AGG | 0.654388 | 3.1:-59175467 | MS.gene039967:CDS |
| CATATCCTGAACCTTGGTCA+CGG | 0.656692 | 3.1:-59172375 | MS.gene039967:CDS |
| TGGACGGTTGATATGGCTGA+CGG | 0.660456 | 3.1:-59172522 | MS.gene039967:CDS |
| GGCTTATGAGACAAGCTGGG+AGG | 0.683527 | 3.1:-59176491 | MS.gene039967:CDS |
| GAGAATAGCATTGACCGGTG+TGG | 0.684858 | 3.1:-59172562 | MS.gene039967:CDS |
| ACGGAGCACCCACAAAACCA+AGG | 0.689374 | 3.1:+59173507 | None:intergenic |
| GAGGAATCAGTTCCATACGT+TGG | 0.710365 | 3.1:-59175448 | MS.gene039967:CDS |
| CATCGTAGTAGGTACTCCTG+AGG | 0.717142 | 3.1:-59172352 | MS.gene039967:CDS |
| CAAGCTTACAACATCCACAC+CGG | 0.721621 | 3.1:+59172548 | None:intergenic |
| TGTCTCATAAGCCAAACAGG+AGG | 0.741224 | 3.1:+59176501 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAATTGATTATTTCA+AGG | + | chr3.1:59175959-59175978 | None:intergenic | 10.0% |
| !! | AATAAAATTGATTATTTCAA+GGG | + | chr3.1:59175958-59175977 | None:intergenic | 10.0% |
| !!! | TTTTGTTCTATTTATTTTTT+TGG | - | chr3.1:59175125-59175144 | MS.gene039967:intron | 10.0% |
| !! | ATAAAATTGATTATTTCAAG+GGG | + | chr3.1:59175957-59175976 | None:intergenic | 15.0% |
| !! | GAATTATAAAACAAACAAAA+AGG | + | chr3.1:59175185-59175204 | None:intergenic | 15.0% |
| !!! | CTTTATTAAATTGAAAGTAT+TGG | - | chr3.1:59175615-59175634 | MS.gene039967:intron | 15.0% |
| !!! | TTTTATTTGTTCTTATCTTT+TGG | - | chr3.1:59174899-59174918 | MS.gene039967:intron | 15.0% |
| !! | AAATAAGGTTTACACAATAA+TGG | + | chr3.1:59172510-59172529 | None:intergenic | 20.0% |
| !! | AATAAGGTTTACACAATAAT+GGG | + | chr3.1:59172509-59172528 | None:intergenic | 20.0% |
| !! | AGATTTATGAATCATCAATT+TGG | - | chr3.1:59174060-59174079 | MS.gene039967:intron | 20.0% |
| !! | CTATAAAATAAAAAGAAGTG+CGG | + | chr3.1:59173824-59173843 | None:intergenic | 20.0% |
| !! | GATTTGTAAATTCTAATCAA+CGG | + | chr3.1:59174204-59174223 | None:intergenic | 20.0% |
| !! | TAAATGTTAATGATAGAAGA+TGG | + | chr3.1:59172440-59172459 | None:intergenic | 20.0% |
| !! | TAATAAAGAAGCAAACAAAT+TGG | + | chr3.1:59176222-59176241 | None:intergenic | 20.0% |
| !! | TATTAAAAAGAAATTGCGAT+TGG | - | chr3.1:59173033-59173052 | MS.gene039967:intron | 20.0% |
| !! | TGTCAAATAATAAAAAAAGC+AGG | - | chr3.1:59175056-59175075 | MS.gene039967:intron | 20.0% |
| !!! | AAAACAGACATTTTTTATGT+CGG | - | chr3.1:59175304-59175323 | MS.gene039967:intron | 20.0% |
| !!! | CAAAAGTATAACAAACAATT+AGG | + | chr3.1:59172728-59172747 | None:intergenic | 20.0% |
| !!! | CTTAGATAAAGTTTTAGTAA+GGG | + | chr3.1:59175277-59175296 | None:intergenic | 20.0% |
| !!! | TCTGTACTTTTTATTTAAAG+TGG | + | chr3.1:59174454-59174473 | None:intergenic | 20.0% |
| !!! | TCTTAGATAAAGTTTTAGTA+AGG | + | chr3.1:59175278-59175297 | None:intergenic | 20.0% |
| !!! | TGTAAACCTTATTTAATGAT+GGG | - | chr3.1:59172516-59172535 | MS.gene039967:CDS | 20.0% |
| !!! | TTTCTCTAAAATAAAGAGAT+TGG | - | chr3.1:59175730-59175749 | MS.gene039967:intron | 20.0% |
| ! | AAAAATATAACCAGTTCAGT+TGG | + | chr3.1:59174408-59174427 | None:intergenic | 25.0% |
| ! | AAAGAAAAAAGCAAAGCATA+GGG | + | chr3.1:59175599-59175618 | None:intergenic | 25.0% |
| ! | AAAGTACAATAAGAGAATGT+AGG | - | chr3.1:59174503-59174522 | MS.gene039967:intron | 25.0% |
| ! | AAGTACAATAAGAGAATGTA+GGG | - | chr3.1:59174504-59174523 | MS.gene039967:intron | 25.0% |
| ! | ACTGAATGATTGTTTAATAG+AGG | - | chr3.1:59174292-59174311 | MS.gene039967:intron | 25.0% |
| ! | AGGTATTACTTCCATTTATT+AGG | - | chr3.1:59172409-59172428 | MS.gene039967:CDS | 25.0% |
| ! | ATTCAGCTCAATTATTTGTT+TGG | - | chr3.1:59173187-59173206 | MS.gene039967:intron | 25.0% |
| ! | ATTCCATTTGACATTGTAAA+AGG | - | chr3.1:59173630-59173649 | MS.gene039967:intron | 25.0% |
| ! | CTAAAAAACATACAGTCTTA+TGG | + | chr3.1:59173883-59173902 | None:intergenic | 25.0% |
| ! | GGTATTACTTCCATTTATTA+GGG | - | chr3.1:59172410-59172429 | MS.gene039967:CDS | 25.0% |
| ! | GTGTATTCGTATTAGAATTT+GGG | - | chr3.1:59172759-59172778 | MS.gene039967:CDS | 25.0% |
| ! | TAAAGAAAAAAGCAAAGCAT+AGG | + | chr3.1:59175600-59175619 | None:intergenic | 25.0% |
| ! | TAATAAATGGAAGTAATACC+TGG | + | chr3.1:59172410-59172429 | None:intergenic | 25.0% |
| ! | TCAATTATTTGCTTCAAGTA+TGG | + | chr3.1:59176520-59176539 | None:intergenic | 25.0% |
| ! | TGTGTATTCGTATTAGAATT+TGG | - | chr3.1:59172758-59172777 | MS.gene039967:CDS | 25.0% |
| !! | AACATTGAATGGATTTGAAT+GGG | + | chr3.1:59172382-59172401 | None:intergenic | 25.0% |
| !! | ATTTAGAACAGGATAAGTAT+AGG | + | chr3.1:59173242-59173261 | None:intergenic | 25.0% |
| !! | GTGTAAACCTTATTTAATGA+TGG | - | chr3.1:59172515-59172534 | MS.gene039967:CDS | 25.0% |
| !! | TATAATTTTGCGTATCACAA+TGG | - | chr3.1:59176125-59176144 | MS.gene039967:intron | 25.0% |
| !! | TCTATTCAAGTACTACATTT+TGG | + | chr3.1:59172978-59172997 | None:intergenic | 25.0% |
| !! | TTGTTATGCATCTGAATTTT+GGG | - | chr3.1:59172554-59172573 | MS.gene039967:CDS | 25.0% |
| !!! | ATTATTTTGAGAAGCTAGTT+TGG | - | chr3.1:59176058-59176077 | MS.gene039967:intron | 25.0% |
| !!! | CTGTTGAAAATGTTCTAAAA+TGG | + | chr3.1:59173154-59173173 | None:intergenic | 25.0% |
| !!! | TTATTTTGAGAAGCTAGTTT+GGG | - | chr3.1:59176059-59176078 | MS.gene039967:intron | 25.0% |
| AAAACCAATTTGACGTTTAG+TGG | + | chr3.1:59173266-59173285 | None:intergenic | 30.0% | |
| AAACCATTTCAAGAAAGAGA+AGG | - | chr3.1:59175025-59175044 | MS.gene039967:intron | 30.0% | |
| AACATATCCACTAAGTTACT+TGG | + | chr3.1:59175227-59175246 | None:intergenic | 30.0% | |
| AAGAAAAAAGCAAAGCATAG+GGG | + | chr3.1:59175598-59175617 | None:intergenic | 30.0% | |
| ACTCTGTTTAACATATGCAA+TGG | - | chr3.1:59172997-59173016 | MS.gene039967:intron | 30.0% | |
| ACTTTGTGTGAAACTAAGAT+TGG | - | chr3.1:59173093-59173112 | MS.gene039967:intron | 30.0% | |
| AGATGGAAAACCCTAATAAA+TGG | + | chr3.1:59172423-59172442 | None:intergenic | 30.0% | |
| ATGATAAAACAGGGATACAA+AGG | + | chr3.1:59173796-59173815 | None:intergenic | 30.0% | |
| ATGGATTTGAATGGGTAAAA+GGG | + | chr3.1:59172374-59172393 | None:intergenic | 30.0% | |
| ATTAAAATGTCCAACTGAAC+TGG | - | chr3.1:59174395-59174414 | MS.gene039967:intron | 30.0% | |
| ATTCGTATTAGAATTTGGGT+TGG | - | chr3.1:59172763-59172782 | MS.gene039967:CDS | 30.0% | |
| ATTGGTAAGCATGAATCATA+TGG | + | chr3.1:59176204-59176223 | None:intergenic | 30.0% | |
| ATTTGACATTGTAAAAGGCA+AGG | - | chr3.1:59173635-59173654 | MS.gene039967:intron | 30.0% | |
| CAAACACCAATCACTAAATT+TGG | + | chr3.1:59172896-59172915 | None:intergenic | 30.0% | |
| CACAAACCCATCATTAAATA+AGG | + | chr3.1:59172525-59172544 | None:intergenic | 30.0% | |
| CCAATTATAAACACATTGTC+AGG | - | chr3.1:59172825-59172844 | MS.gene039967:intron | 30.0% | |
| CCTGACAATGTGTTTATAAT+TGG | + | chr3.1:59172828-59172847 | None:intergenic | 30.0% | |
| CTCTGTTTAACATATGCAAT+GGG | - | chr3.1:59172998-59173017 | MS.gene039967:intron | 30.0% | |
| GAACATCCAAATTTAGTGAT+TGG | - | chr3.1:59172887-59172906 | MS.gene039967:intron | 30.0% | |
| GATTAGATAATTAGAGTCTC+TGG | + | chr3.1:59175515-59175534 | None:intergenic | 30.0% | |
| GCAAAAGTTTACAACATCAA+TGG | - | chr3.1:59176390-59176409 | MS.gene039967:intron | 30.0% | |
| GTAAATTCTAATCAACGGTT+CGG | + | chr3.1:59174199-59174218 | None:intergenic | 30.0% | |
| TAACCAATGAGTTCTTAAAC+TGG | - | chr3.1:59175900-59175919 | MS.gene039967:intron | 30.0% | |
| TAGTATTTATAGCCTGCTAT+GGG | - | chr3.1:59174588-59174607 | MS.gene039967:intron | 30.0% | |
| TGGCAGAAACACAAATTTAA+TGG | + | chr3.1:59175207-59175226 | None:intergenic | 30.0% | |
| TGTACAGATATTCGATTCAT+GGG | - | chr3.1:59176453-59176472 | MS.gene039967:intron | 30.0% | |
| TTTCCTTCTCTTTCTTGAAA+TGG | + | chr3.1:59175031-59175050 | None:intergenic | 30.0% | |
| TTTGACATTGTAAAAGGCAA+GGG | - | chr3.1:59173636-59173655 | MS.gene039967:intron | 30.0% | |
| ! | AATGGATTTGAATGGGTAAA+AGG | + | chr3.1:59172375-59172394 | None:intergenic | 30.0% |
| ! | ATGGACAGCTTTTTAATCAT+AGG | + | chr3.1:59176185-59176204 | None:intergenic | 30.0% |
| ! | ATGTTTTGTAGACAGTTAAC+CGG | - | chr3.1:59174230-59174249 | MS.gene039967:intron | 30.0% |
| ! | CTAAGCCTTTAGGAATATTA+TGG | - | chr3.1:59174812-59174831 | MS.gene039967:intron | 30.0% |
| ! | CTATATGGTTTAGTTCAGTT+CGG | + | chr3.1:59174174-59174193 | None:intergenic | 30.0% |
| ! | GAACATTGAATGGATTTGAA+TGG | + | chr3.1:59172383-59172402 | None:intergenic | 30.0% |
| ! | GTTGTTATGCATCTGAATTT+TGG | - | chr3.1:59172553-59172572 | MS.gene039967:CDS | 30.0% |
| ! | TCATTGGTTATTGTGTAGAA+AGG | + | chr3.1:59175890-59175909 | None:intergenic | 30.0% |
| ! | TTCGTATTAGAATTTGGGTT+GGG | - | chr3.1:59172764-59172783 | MS.gene039967:CDS | 30.0% |
| ! | TTGCCTTTTACAATGTCAAA+TGG | + | chr3.1:59173636-59173655 | None:intergenic | 30.0% |
| !! | AATTTTGGGAATTTATGTGC+AGG | - | chr3.1:59172568-59172587 | MS.gene039967:CDS | 30.0% |
| !! | CTTCTTGAATAAGCTTTGAA+AGG | - | chr3.1:59173289-59173308 | MS.gene039967:intron | 30.0% |
| !! | GATAAAGTTTTAGTAAGGGA+AGG | + | chr3.1:59175273-59175292 | None:intergenic | 30.0% |
| !! | TTCAGTTTTGTGAATCATGT+CGG | - | chr3.1:59175434-59175453 | MS.gene039967:CDS | 30.0% |
| !!! | GAATGTAGCACATTTTTTTG+AGG | - | chr3.1:59176843-59176862 | MS.gene039967:CDS | 30.0% |
| AACCGCCATAATATTCCTAA+AGG | + | chr3.1:59174820-59174839 | None:intergenic | 35.0% | |
| AACTCTTCAAAATTTCAGCC+CGG | + | chr3.1:59174252-59174271 | None:intergenic | 35.0% | |
| AATGCCACTAAACGTCAAAT+TGG | - | chr3.1:59173259-59173278 | MS.gene039967:intron | 35.0% | |
| AGATAATTAGAGTCTCTGGT+GGG | + | chr3.1:59175511-59175530 | None:intergenic | 35.0% | |
| AGGTGGTTAAAGATTACCTT+TGG | + | chr3.1:59175767-59175786 | None:intergenic | 35.0% | |
| ATACAATACCAAGCTGACAA+TGG | - | chr3.1:59176421-59176440 | MS.gene039967:intron | 35.0% | |
| ATCTGAAAACGTTGATCTTG+TGG | - | chr3.1:59173389-59173408 | MS.gene039967:intron | 35.0% | |
| ATTGCGAATCATAGATAGAG+GGG | - | chr3.1:59173947-59173966 | MS.gene039967:intron | 35.0% | |
| CAGTGGCTATCAAGATAATA+TGG | - | chr3.1:59174027-59174046 | MS.gene039967:intron | 35.0% | |
| CGTCTTAAATAGTAGTTACC+TGG | - | chr3.1:59174118-59174137 | MS.gene039967:intron | 35.0% | |
| CTAGGGTTTAGACTGATTAT+TGG | - | chr3.1:59174541-59174560 | MS.gene039967:intron | 35.0% | |
| CTGTACAGATATTCGATTCA+TGG | - | chr3.1:59176452-59176471 | MS.gene039967:intron | 35.0% | |
| CTGTTACATTTGGAAAAGCT+TGG | - | chr3.1:59176150-59176169 | MS.gene039967:intron | 35.0% | |
| CTTAAACTGGTCATTTAGAG+CGG | - | chr3.1:59175913-59175932 | MS.gene039967:intron | 35.0% | |
| GATAATAAATCTGCAGTCCT+TGG | - | chr3.1:59175647-59175666 | MS.gene039967:intron | 35.0% | |
| GATATTCTTACACCACTTTC+TGG | - | chr3.1:59173600-59173619 | MS.gene039967:intron | 35.0% | |
| GATTGCGAATCATAGATAGA+GGG | - | chr3.1:59173946-59173965 | MS.gene039967:intron | 35.0% | |
| GGAATATTCATTCCAGAAAG+TGG | + | chr3.1:59173615-59173634 | None:intergenic | 35.0% | |
| GGATTGTCACATTCTTTGTA+TGG | - | chr3.1:59173208-59173227 | MS.gene039967:intron | 35.0% | |
| GTAGTATTTATAGCCTGCTA+TGG | - | chr3.1:59174587-59174606 | MS.gene039967:intron | 35.0% | |
| GTATGTGCAATAAAGAGAGA+AGG | + | chr3.1:59175163-59175182 | None:intergenic | 35.0% | |
| GTCACATTCTTTGTATGGTT+TGG | - | chr3.1:59173213-59173232 | MS.gene039967:intron | 35.0% | |
| GTGGAAATTCAACACAGTTT+GGG | - | chr3.1:59175338-59175357 | MS.gene039967:intron | 35.0% | |
| TAGATAATTAGAGTCTCTGG+TGG | + | chr3.1:59175512-59175531 | None:intergenic | 35.0% | |
| TATGCTTTCAACTTTCAGAG+TGG | - | chr3.1:59176278-59176297 | MS.gene039967:intron | 35.0% | |
| TCAAAACTGAACTACTCTAC+TGG | + | chr3.1:59175393-59175412 | None:intergenic | 35.0% | |
| TGACCAGTTTAAGAACTCAT+TGG | + | chr3.1:59175906-59175925 | None:intergenic | 35.0% | |
| TGATTGCGAATCATAGATAG+AGG | - | chr3.1:59173945-59173964 | MS.gene039967:intron | 35.0% | |
| TGGAATTTGACTAAACAGAC+AGG | + | chr3.1:59173863-59173882 | None:intergenic | 35.0% | |
| TGTGGAAATTCAACACAGTT+TGG | - | chr3.1:59175337-59175356 | MS.gene039967:intron | 35.0% | |
| TTACCTTGGATAGCTACATT+TGG | + | chr3.1:59176691-59176710 | None:intergenic | 35.0% | |
| TTATTCAGCAGTTCAAAACC+TGG | - | chr3.1:59175855-59175874 | MS.gene039967:intron | 35.0% | |
| TTCACAAAACTGAATCGAAC+TGG | + | chr3.1:59175428-59175447 | None:intergenic | 35.0% | |
| TTGAAATTTCATTGCAACCG+TGG | - | chr3.1:59173412-59173431 | MS.gene039967:intron | 35.0% | |
| TTGTCAGGTCATATGTCATT+TGG | - | chr3.1:59172840-59172859 | MS.gene039967:intron | 35.0% | |
| ! | ACTATCAATTTTGCGCAAAG+AGG | - | chr3.1:59173752-59173771 | MS.gene039967:intron | 35.0% |
| ! | AGAGAGCTTCGTTTCATTTT+AGG | - | chr3.1:59174350-59174369 | MS.gene039967:intron | 35.0% |
| ! | AGCCTTTAGGAATATTATGG+CGG | - | chr3.1:59174815-59174834 | MS.gene039967:intron | 35.0% |
| ! | AGGGTTAAGTATCGTATTCT+AGG | - | chr3.1:59174523-59174542 | MS.gene039967:intron | 35.0% |
| ! | AGGTTTCTAGAAGCTTAGAT+GGG | - | chr3.1:59174675-59174694 | MS.gene039967:intron | 35.0% |
| ! | CATATTATCTTGATAGCCAC+TGG | + | chr3.1:59174029-59174048 | None:intergenic | 35.0% |
| ! | GGGTTAAGTATCGTATTCTA+GGG | - | chr3.1:59174524-59174543 | MS.gene039967:intron | 35.0% |
| ! | GGTATTTTTCGCAGATGATT+TGG | + | chr3.1:59173353-59173372 | None:intergenic | 35.0% |
| ! | TGTCAGGTCATATGTCATTT+GGG | - | chr3.1:59172841-59172860 | MS.gene039967:intron | 35.0% |
| ! | TGTTTTGTAGACAGTTAACC+GGG | - | chr3.1:59174231-59174250 | MS.gene039967:intron | 35.0% |
| !! | AAATTGAAAGTATTGGTCGC+AGG | - | chr3.1:59175622-59175641 | MS.gene039967:intron | 35.0% |
| !! | TCTGTGGCATTAGTTGTTTT+AGG | + | chr3.1:59172607-59172626 | None:intergenic | 35.0% |
| !! | TGTTGTGGTTCTGATTATGT+TGG | - | chr3.1:59173527-59173546 | MS.gene039967:CDS | 35.0% |
| !!! | ATGATGGGTTTGTGTTGTTT+TGG | - | chr3.1:59172531-59172550 | MS.gene039967:CDS | 35.0% |
| !!! | CATTTTTTTGAGGTTGCCAA+AGG | - | chr3.1:59176853-59176872 | MS.gene039967:CDS | 35.0% |
| !!! | GTGTTGTTTTCTGGGTAAAA+TGG | + | chr3.1:59172342-59172361 | None:intergenic | 35.0% |
| !!! | TCGTTTCATTTTAGGACAGT+GGG | - | chr3.1:59174358-59174377 | MS.gene039967:intron | 35.0% |
| !!! | TTCGTTTCATTTTAGGACAG+TGG | - | chr3.1:59174357-59174376 | MS.gene039967:intron | 35.0% |
| AAAAAGCAGGAAACGTGAAG+TGG | - | chr3.1:59175069-59175088 | MS.gene039967:intron | 40.0% | |
| AAATGTGCTACATTCTCCTC+AGG | + | chr3.1:59176838-59176857 | None:intergenic | 40.0% | |
| AAGCACATCCTAAGTTCACA+TGG | + | chr3.1:59175826-59175845 | None:intergenic | 40.0% | |
| AATTTCATTGCAACCGTGGA+AGG | - | chr3.1:59173416-59173435 | MS.gene039967:intron | 40.0% | |
| ACCTGGAAGAGAACATTGAA+TGG | + | chr3.1:59172393-59172412 | None:intergenic | 40.0% | |
| AGAACCACAACACAAGAAGT+AGG | + | chr3.1:59173519-59173538 | None:intergenic | 40.0% | |
| ATAGTAGTTACCTGGAGACT+AGG | - | chr3.1:59174126-59174145 | MS.gene039967:intron | 40.0% | |
| ATCCAAGGTAATGTTGATCC+TGG | - | chr3.1:59176700-59176719 | MS.gene039967:intron | 40.0% | |
| ATTGAGCAAAAGAGGTTCTG+TGG | + | chr3.1:59172623-59172642 | None:intergenic | 40.0% | |
| ATTGGCATTCTCTGAACCAA+AGG | - | chr3.1:59175748-59175767 | MS.gene039967:CDS | 40.0% | |
| CACAATGGAGCTGTTACATT+TGG | - | chr3.1:59176140-59176159 | MS.gene039967:intron | 40.0% | |
| CACTTGCATAGAGGATAAGA+GGG | + | chr3.1:59176570-59176589 | None:intergenic | 40.0% | |
| CTGAATCGTTCAAAATCCAC+TGG | + | chr3.1:59176493-59176512 | None:intergenic | 40.0% | |
| GAACCACAACACAAGAAGTA+GGG | + | chr3.1:59173518-59173537 | None:intergenic | 40.0% | |
| GAGAGTTATATTACCCCATC+AGG | + | chr3.1:59173450-59173469 | None:intergenic | 40.0% | |
| GGGTGTAATGACATTAAGTG+AGG | - | chr3.1:59173967-59173986 | MS.gene039967:intron | 40.0% | |
| GTAGAAAGGTAAAACATGCC+AGG | + | chr3.1:59175876-59175895 | None:intergenic | 40.0% | |
| GTGAACTGGGTCAAATATGA+CGG | + | chr3.1:59173664-59173683 | None:intergenic | 40.0% | |
| GTTTAATAGAGGAAAGCTGC+TGG | - | chr3.1:59174303-59174322 | MS.gene039967:intron | 40.0% | |
| GTTTCTGCCAAGTAACTTAG+TGG | - | chr3.1:59175217-59175236 | MS.gene039967:intron | 40.0% | |
| TCCATTCAATGTTCTCTTCC+AGG | - | chr3.1:59172389-59172408 | MS.gene039967:CDS | 40.0% | |
| TGAACTGGGTCAAATATGAC+GGG | + | chr3.1:59173663-59173682 | None:intergenic | 40.0% | |
| TGGATGTTGTAAGCTTGGAT+TGG | - | chr3.1:59176629-59176648 | MS.gene039967:intron | 40.0% | |
| TGTGTGAAACTAAGATTGGC+TGG | - | chr3.1:59173097-59173116 | MS.gene039967:intron | 40.0% | |
| TTACCCTACTTCTTGTGTTG+TGG | - | chr3.1:59173512-59173531 | MS.gene039967:CDS | 40.0% | |
| TTTGAATGGGTAAAAGGGTG+TGG | + | chr3.1:59172369-59172388 | None:intergenic | 40.0% | |
| ! | AACGTATGGAACTGATTCCT+CGG | + | chr3.1:59173724-59173743 | None:intergenic | 40.0% |
| ! | ACTGAACTACTCTACTGGTT+TGG | + | chr3.1:59175388-59175407 | None:intergenic | 40.0% |
| ! | ACTTTTGCAGTAACGAGTGA+AGG | + | chr3.1:59176378-59176397 | None:intergenic | 40.0% |
| ! | ATTTTGCGCAAAGAGGTTTG+AGG | - | chr3.1:59173759-59173778 | MS.gene039967:intron | 40.0% |
| ! | CAACGTTTTCAGATCTTTCC+CGG | + | chr3.1:59173383-59173402 | None:intergenic | 40.0% |
| ! | CGTTTAGTGGCATTTAGAAC+AGG | + | chr3.1:59173253-59173272 | None:intergenic | 40.0% |
| ! | GAGGTTTCTAGAAGCTTAGA+TGG | - | chr3.1:59174674-59174693 | MS.gene039967:intron | 40.0% |
| ! | TGTTGTAAGCTTGGATTGGA+CGG | - | chr3.1:59176633-59176652 | MS.gene039967:intron | 40.0% |
| ! | TTTGGCTTATGAGACAAGCT+GGG | - | chr3.1:59172677-59172696 | MS.gene039967:CDS | 40.0% |
| !! | AGTAAGGGAAGGCATTGTTA+GGG | + | chr3.1:59175262-59175281 | None:intergenic | 40.0% |
| !! | ATCAACGGTTCGGTTCTATA+TGG | + | chr3.1:59174189-59174208 | None:intergenic | 40.0% |
| !! | CTCGATACTGATTCTGTAAC+AGG | - | chr3.1:59173563-59173582 | MS.gene039967:intron | 40.0% |
| !! | CTTGAGAGAATAGCATTGAC+CGG | - | chr3.1:59176604-59176623 | MS.gene039967:intron | 40.0% |
| !! | GTATTTTAGGCGGTTTCTAG+AGG | - | chr3.1:59174655-59174674 | MS.gene039967:intron | 40.0% |
| !! | TACTCTTGAGAGCATTCTCA+AGG | + | chr3.1:59174570-59174589 | None:intergenic | 40.0% |
| !! | TAGTAAGGGAAGGCATTGTT+AGG | + | chr3.1:59175263-59175282 | None:intergenic | 40.0% |
| !!! | CAGGGGTATTGGTGTATTTT+AGG | - | chr3.1:59174642-59174661 | MS.gene039967:intron | 40.0% |
| !!! | GGGTATTGGTGTATTTTAGG+CGG | - | chr3.1:59174645-59174664 | MS.gene039967:intron | 40.0% |
| !!! | TTTCATTTTAGGACAGTGGG+AGG | - | chr3.1:59174361-59174380 | MS.gene039967:intron | 40.0% |
| ACTCCCTCACTTGATCAACT+TGG | + | chr3.1:59173695-59173714 | None:intergenic | 45.0% | |
| ACTTACGAGATAGACGAAGG+TGG | + | chr3.1:59175784-59175803 | None:intergenic | 45.0% | |
| AGTAACGAGTGAAGGATCTG+TGG | + | chr3.1:59176370-59176389 | None:intergenic | 45.0% | |
| AGTTCTTAGAGCCTTTCTGG+AGG | - | chr3.1:59174785-59174804 | MS.gene039967:intron | 45.0% | |
| ATCCTCTATGCAAGTGGATC+AGG | - | chr3.1:59176574-59176593 | MS.gene039967:CDS | 45.0% | |
| ATGTCGAAAGACCTCCTGTT+TGG | - | chr3.1:59172659-59172678 | MS.gene039967:CDS | 45.0% | |
| CAAGCTTACAACATCCACAC+CGG | + | chr3.1:59176626-59176645 | None:intergenic | 45.0% | |
| CACCAGGATCAACATTACCT+TGG | + | chr3.1:59176705-59176724 | None:intergenic | 45.0% | |
| CACGGTATCGTGTATCCTAT+CGG | + | chr3.1:59176755-59176774 | None:intergenic | 45.0% | |
| CAGGGATACAAAGGTAGTGT+AGG | + | chr3.1:59173787-59173806 | None:intergenic | 45.0% | |
| CATATCCTGAACCTTGGTCA+CGG | - | chr3.1:59176796-59176815 | MS.gene039967:CDS | 45.0% | |
| CCACTTGCATAGAGGATAAG+AGG | + | chr3.1:59176571-59176590 | None:intergenic | 45.0% | |
| CCTACTTACGAGATAGACGA+AGG | + | chr3.1:59175787-59175806 | None:intergenic | 45.0% | |
| CCTCTTATCCTCTATGCAAG+TGG | - | chr3.1:59176568-59176587 | MS.gene039967:CDS | 45.0% | |
| CCTTCGTCTATCTCGTAAGT+AGG | - | chr3.1:59175784-59175803 | MS.gene039967:CDS | 45.0% | |
| CGAAAAATACCCGTCATTCC+GGG | - | chr3.1:59173362-59173381 | MS.gene039967:intron | 45.0% | |
| CGAAAGAGCTGATTACCGAT+AGG | - | chr3.1:59176737-59176756 | MS.gene039967:intron | 45.0% | |
| CGAACTGCATTGAGCAAAAG+AGG | + | chr3.1:59172631-59172650 | None:intergenic | 45.0% | |
| GAGGAATCAGTTCCATACGT+TGG | - | chr3.1:59173723-59173742 | MS.gene039967:intron | 45.0% | |
| GATACACGATACCGTGAGAA+AGG | - | chr3.1:59176759-59176778 | MS.gene039967:intron | 45.0% | |
| GATAGTGCTTCACCAACGTA+TGG | + | chr3.1:59173738-59173757 | None:intergenic | 45.0% | |
| GCGAAAAATACCCGTCATTC+CGG | - | chr3.1:59173361-59173380 | MS.gene039967:intron | 45.0% | |
| GCGGCTGAGATGATAAAACA+GGG | + | chr3.1:59173805-59173824 | None:intergenic | 45.0% | |
| GCTTGTCTCATAAGCCAAAC+AGG | + | chr3.1:59172676-59172695 | None:intergenic | 45.0% | |
| GCTTGTCTCCATGTGAACTT+AGG | - | chr3.1:59175815-59175834 | MS.gene039967:CDS | 45.0% | |
| GGACCAAATGTAGCTATCCA+AGG | - | chr3.1:59176685-59176704 | MS.gene039967:intron | 45.0% | |
| GGGAAACATATCCTGAACCT+TGG | - | chr3.1:59176790-59176809 | MS.gene039967:CDS | 45.0% | |
| GTCGGCAGTTCAGTTTAGTT+CGG | - | chr3.1:59175452-59175471 | MS.gene039967:CDS | 45.0% | |
| GTTATATTACCCCATCAGGC+TGG | + | chr3.1:59173446-59173465 | None:intergenic | 45.0% | |
| GTTCTTAGAGCCTTTCTGGA+GGG | - | chr3.1:59174786-59174805 | MS.gene039967:intron | 45.0% | |
| GTTGATCCTGGTGTTCTGTT+TGG | - | chr3.1:59176712-59176731 | MS.gene039967:intron | 45.0% | |
| GTTTCATAGCCAATCCTGCA+AGG | + | chr3.1:59174879-59174898 | None:intergenic | 45.0% | |
| TAGAAGTGATACGACCTTGC+AGG | - | chr3.1:59174862-59174881 | MS.gene039967:intron | 45.0% | |
| TAGAGGATAAGAGGGAGTTC+TGG | + | chr3.1:59176562-59176581 | None:intergenic | 45.0% | |
| TATGTCGGTGCACAGTTATG+TGG | - | chr3.1:59175319-59175338 | MS.gene039967:intron | 45.0% | |
| TCAGATCTTTCCCGGAATGA+CGG | + | chr3.1:59173375-59173394 | None:intergenic | 45.0% | |
| TGCGGCTGAGATGATAAAAC+AGG | + | chr3.1:59173806-59173825 | None:intergenic | 45.0% | |
| TGGAGTTCTTAGAGCCTTTC+TGG | - | chr3.1:59174782-59174801 | MS.gene039967:intron | 45.0% | |
| TGTCTCATAAGCCAAACAGG+AGG | + | chr3.1:59172673-59172692 | None:intergenic | 45.0% | |
| TTATAGCCTGCTATGGGCTT+GGG | - | chr3.1:59174594-59174613 | MS.gene039967:intron | 45.0% | |
| TTCGATCCAAACAGAACACC+AGG | + | chr3.1:59176721-59176740 | None:intergenic | 45.0% | |
| TTGATATGGCTGACGGTAGA+AGG | - | chr3.1:59176656-59176675 | MS.gene039967:intron | 45.0% | |
| TTTATAGCCTGCTATGGGCT+TGG | - | chr3.1:59174593-59174612 | MS.gene039967:intron | 45.0% | |
| ! | ACGTATGGAACTGATTCCTC+GGG | + | chr3.1:59173723-59173742 | None:intergenic | 45.0% |
| ! | AGGCATTGTTAGGGTCACTA+AGG | + | chr3.1:59175253-59175272 | None:intergenic | 45.0% |
| ! | CAGTTCAGTTTAGTTCGGTG+TGG | - | chr3.1:59175457-59175476 | MS.gene039967:CDS | 45.0% |
| ! | CTGGTGGGCAGTTTAAACTT+CGG | + | chr3.1:59175496-59175515 | None:intergenic | 45.0% |
| ! | CTTGGATTGGACGGTTGATA+TGG | - | chr3.1:59176642-59176661 | MS.gene039967:intron | 45.0% |
| ! | CTTTTGCTCAATGCAGTTCG+TGG | - | chr3.1:59172631-59172650 | MS.gene039967:CDS | 45.0% |
| ! | GTGAAGTGGTCTAAAGCATG+AGG | - | chr3.1:59175083-59175102 | MS.gene039967:intron | 45.0% |
| ! | GTTTGGCTTATGAGACAAGC+TGG | - | chr3.1:59172676-59172695 | MS.gene039967:CDS | 45.0% |
| ! | TTATCTTGATAGCCACTGGC+AGG | + | chr3.1:59174025-59174044 | None:intergenic | 45.0% |
| !! | AAGGCTCTAAGAACTCCAGA+AGG | + | chr3.1:59174780-59174799 | None:intergenic | 45.0% |
| !! | AGGCCAAGTTGATCAAGTGA+GGG | - | chr3.1:59173689-59173708 | MS.gene039967:intron | 45.0% |
| !! | AGGCTCTAAGAACTCCAGAA+GGG | + | chr3.1:59174779-59174798 | None:intergenic | 45.0% |
| !! | CGCAGATGATTTGGTAACTC+TGG | + | chr3.1:59173344-59173363 | None:intergenic | 45.0% |
| !!! | ATCTGCAGTCCTTGGTTTTG+TGG | - | chr3.1:59175655-59175674 | MS.gene039967:intron | 45.0% |
| !!! | GTGGTGTGGTGTTGTTTTCT+GGG | + | chr3.1:59172350-59172369 | None:intergenic | 45.0% |
| !!! | TCTGCAGTCCTTGGTTTTGT+GGG | - | chr3.1:59175656-59175675 | MS.gene039967:intron | 45.0% |
| !!! | TGTGGTGTGGTGTTGTTTTC+TGG | + | chr3.1:59172351-59172370 | None:intergenic | 45.0% |
| !!! | TTTTTTTAAAAAATTTAATC+TGG | - | chr3.1:59172483-59172502 | MS.gene039967:CDS | 5.0% |
| ACACCAATACCCCTGTTGCT+TGG | + | chr3.1:59174637-59174656 | None:intergenic | 50.0% | |
| ACATACGACGCCAGGGTAAA+CGG | + | chr3.1:59175686-59175705 | None:intergenic | 50.0% | |
| AGTGAGGGAGTTTATTCCCG+AGG | - | chr3.1:59173704-59173723 | MS.gene039967:intron | 50.0% | |
| CACTTGATCAACTTGGCCTG+CGG | + | chr3.1:59173688-59173707 | None:intergenic | 50.0% | |
| CAGATCTTTCCCGGAATGAC+GGG | + | chr3.1:59173374-59173393 | None:intergenic | 50.0% | |
| CATCGTAGTAGGTACTCCTG+AGG | - | chr3.1:59176819-59176838 | MS.gene039967:CDS | 50.0% | |
| CGGTGTGGATGTTGTAAGCT+TGG | - | chr3.1:59176624-59176643 | MS.gene039967:intron | 50.0% | |
| CTCCTGATCCACTTGCATAG+AGG | + | chr3.1:59176579-59176598 | None:intergenic | 50.0% | |
| CTCTATGCAAGTGGATCAGG+AGG | - | chr3.1:59176577-59176596 | MS.gene039967:CDS | 50.0% | |
| CTTAGATGGGCGATGCCTTA+AGG | - | chr3.1:59174688-59174707 | MS.gene039967:intron | 50.0% | |
| GCTGACGGTAGAAGGAGATT+GGG | - | chr3.1:59176664-59176683 | MS.gene039967:intron | 50.0% | |
| GGGTTTGAACCAGTAGAGCA+TGG | - | chr3.1:59175358-59175377 | MS.gene039967:intron | 50.0% | |
| GTGATACGACCTTGCAGGAT+TGG | - | chr3.1:59174867-59174886 | MS.gene039967:intron | 50.0% | |
| GTTGAACAGTCCTAGTCTCC+AGG | + | chr3.1:59174139-59174158 | None:intergenic | 50.0% | |
| TAAGAACTCCAGAAGGGCTC+AGG | + | chr3.1:59174773-59174792 | None:intergenic | 50.0% | |
| TACAAGCCGGAGGTTTAGTC+AGG | + | chr3.1:59172790-59172809 | None:intergenic | 50.0% | |
| TCAGGCTGGAAAACCTTCCA+CGG | + | chr3.1:59173432-59173451 | None:intergenic | 50.0% | |
| TGCTTGGTTCCCAAGCAACA+GGG | - | chr3.1:59174624-59174643 | MS.gene039967:intron | 50.0% | |
| TGGAGGGCTTCTAAGCCTTT+AGG | - | chr3.1:59174802-59174821 | MS.gene039967:intron | 50.0% | |
| TTCAACCACATACGACGCCA+GGG | + | chr3.1:59175693-59175712 | None:intergenic | 50.0% | |
| TTGCTTGGTTCCCAAGCAAC+AGG | - | chr3.1:59174623-59174642 | MS.gene039967:intron | 50.0% | |
| ! | AAACCTCCGGCTTGTAAGGT+GGG | - | chr3.1:59172794-59172813 | MS.gene039967:CDS | 50.0% |
| ! | ACAAGCTGGGAGGTACATGA+AGG | - | chr3.1:59172690-59172709 | MS.gene039967:CDS | 50.0% |
| ! | ATGGGTAAAAGGGTGTGGTG+TGG | + | chr3.1:59172364-59172383 | None:intergenic | 50.0% |
| ! | CACCAATACCCCTGTTGCTT+GGG | + | chr3.1:59174636-59174655 | None:intergenic | 50.0% |
| ! | GAAGGTTTTCCAGCCTGATG+GGG | - | chr3.1:59173434-59173453 | MS.gene039967:CDS | 50.0% |
| ! | GACTAAACCTCCGGCTTGTA+AGG | - | chr3.1:59172790-59172809 | MS.gene039967:CDS | 50.0% |
| ! | GGAAGGTTTTCCAGCCTGAT+GGG | - | chr3.1:59173433-59173452 | MS.gene039967:CDS | 50.0% |
| ! | TAAACCTCCGGCTTGTAAGG+TGG | - | chr3.1:59172793-59172812 | MS.gene039967:CDS | 50.0% |
| ! | TGGAAGGTTTTCCAGCCTGA+TGG | - | chr3.1:59173432-59173451 | MS.gene039967:CDS | 50.0% |
| ! | TGGACGGTTGATATGGCTGA+CGG | - | chr3.1:59176649-59176668 | MS.gene039967:intron | 50.0% |
| ! | TTCCCAAGCAACAGGGGTAT+TGG | - | chr3.1:59174631-59174650 | MS.gene039967:intron | 50.0% |
| ! | TTTGGTGCACCATGCTCTAC+TGG | + | chr3.1:59175370-59175389 | None:intergenic | 50.0% |
| !! | CAGGCCAAGTTGATCAAGTG+AGG | - | chr3.1:59173688-59173707 | MS.gene039967:intron | 50.0% |
| !! | GAGAATAGCATTGACCGGTG+TGG | - | chr3.1:59176609-59176628 | MS.gene039967:intron | 50.0% |
| !! | GGATAAGAGGGAGTTCTGGA+TGG | + | chr3.1:59176558-59176577 | None:intergenic | 50.0% |
| AACACTGTCTGTCCTGCCAG+TGG | - | chr3.1:59174010-59174029 | MS.gene039967:intron | 55.0% | |
| ACCGTGAGAAAGGCTGGTAG+AGG | - | chr3.1:59176769-59176788 | MS.gene039967:intron | 55.0% | |
| CACGATACCGTGAGAAAGGC+TGG | - | chr3.1:59176763-59176782 | MS.gene039967:intron | 55.0% | |
| CCCTCTACCAGCCTTTCTCA+CGG | + | chr3.1:59176773-59176792 | None:intergenic | 55.0% | |
| CCGTGAGAAAGGCTGGTAGA+GGG | - | chr3.1:59176770-59176789 | MS.gene039967:intron | 55.0% | |
| CCTGCTATGGGCTTGGGTTT+CGG | - | chr3.1:59174600-59174619 | MS.gene039967:intron | 55.0% | |
| CTACTACGATGCCGTGACCA+AGG | + | chr3.1:59176810-59176829 | None:intergenic | 55.0% | |
| CTGGCGTCGTATGTGGTTGA+AGG | - | chr3.1:59175692-59175711 | MS.gene039967:intron | 55.0% | |
| CTTCAACCACATACGACGCC+AGG | + | chr3.1:59175694-59175713 | None:intergenic | 55.0% | |
| CTTGCGCTCCATTGTCAGCT+TGG | + | chr3.1:59176432-59176451 | None:intergenic | 55.0% | |
| CTTGGTCACGGCATCGTAGT+AGG | - | chr3.1:59176808-59176827 | MS.gene039967:CDS | 55.0% | |
| GACAGTGGGAGGACGAAAGA+AGG | - | chr3.1:59174372-59174391 | MS.gene039967:intron | 55.0% | |
| GCGTCGTATGTGGTTGAAGG+CGG | - | chr3.1:59175695-59175714 | MS.gene039967:intron | 55.0% | |
| GCTTGGTTCCCAAGCAACAG+GGG | - | chr3.1:59174625-59174644 | MS.gene039967:intron | 55.0% | |
| GGCAACAGAGCTTAGTCCAG+TGG | - | chr3.1:59176474-59176493 | MS.gene039967:intron | 55.0% | |
| GGCTGACGGTAGAAGGAGAT+TGG | - | chr3.1:59176663-59176682 | MS.gene039967:intron | 55.0% | |
| GGCTTAGAAGCCCTCCAGAA+AGG | + | chr3.1:59174799-59174818 | None:intergenic | 55.0% | |
| GGCTTATGAGACAAGCTGGG+AGG | - | chr3.1:59172680-59172699 | MS.gene039967:CDS | 55.0% | |
| GTTGGGCCTGACTAAACCTC+CGG | - | chr3.1:59172781-59172800 | MS.gene039967:CDS | 55.0% | |
| GTTTACCCTGGCGTCGTATG+TGG | - | chr3.1:59175685-59175704 | MS.gene039967:intron | 55.0% | |
| TTTGACCCAGTTCACTCCGC+AGG | - | chr3.1:59173669-59173688 | MS.gene039967:intron | 55.0% | |
| ! | AACCTCCGGCTTGTAAGGTG+GGG | - | chr3.1:59172795-59172814 | MS.gene039967:CDS | 55.0% |
| ! | ACGGAGCACCCACAAAACCA+AGG | + | chr3.1:59175667-59175686 | None:intergenic | 55.0% |
| ACCGTCCCCACCTTACAAGC+CGG | + | chr3.1:59172803-59172822 | None:intergenic | 60.0% | |
| ACTTGGCCTGCGGAGTGAAC+TGG | + | chr3.1:59173678-59173697 | None:intergenic | 60.0% | |
| AGTCTCAGGAGCCCTTCTGG+AGG | - | chr3.1:59174723-59174742 | MS.gene039967:intron | 60.0% | |
| CAGAAGGGCTCCTGAGACTC+CGG | + | chr3.1:59174722-59174741 | None:intergenic | 60.0% | |
| CCGAAACCCAAGCCCATAGC+AGG | + | chr3.1:59174603-59174622 | None:intergenic | 60.0% | |
| CGATGCCGTGACCAAGGTTC+AGG | + | chr3.1:59176804-59176823 | None:intergenic | 60.0% | |
| CTTGGCCTGCGGAGTGAACT+GGG | + | chr3.1:59173677-59173696 | None:intergenic | 60.0% | |
| GGGCTTGGGTTTCGGTTGCT+TGG | - | chr3.1:59174608-59174627 | MS.gene039967:intron | 60.0% | |
| GTCTCAGGAGCCCTTCTGGA+GGG | - | chr3.1:59174724-59174743 | MS.gene039967:intron | 60.0% | |
| TGTGGGTGCTCCGTTTACCC+TGG | - | chr3.1:59175673-59175692 | MS.gene039967:intron | 60.0% | |
| ! | TCCGGCTTGTAAGGTGGGGA+CGG | - | chr3.1:59172799-59172818 | MS.gene039967:CDS | 60.0% |
| ATGCCTTAAGGCGAGCGCGC+CGG | - | chr3.1:59174700-59174719 | MS.gene039967:intron | 65.0% | |
| CGGAGTCTCAGGAGCCCTTC+TGG | - | chr3.1:59174720-59174739 | MS.gene039967:intron | 65.0% | |
| GTCCCCACCTTACAAGCCGG+AGG | + | chr3.1:59172800-59172819 | None:intergenic | 65.0% | |
| ACTCCGGCGCGCTCGCCTTA+AGG | + | chr3.1:59174706-59174725 | None:intergenic | 70.0% | |
| GGCGCCTGAGCCCTTCTGGA+GGG | - | chr3.1:59174745-59174764 | MS.gene039967:intron | 70.0% | |
| GGCTCAGGCGCCCTCCAGAA+GGG | + | chr3.1:59174737-59174756 | None:intergenic | 70.0% | |
| GGCGCCCTCCAGAAGGGCTC+AGG | + | chr3.1:59174731-59174750 | None:intergenic | 75.0% | |
| GGGCGCCTGAGCCCTTCTGG+AGG | - | chr3.1:59174744-59174763 | MS.gene039967:intron | 75.0% | |
| GGGCTCAGGCGCCCTCCAGA+AGG | + | chr3.1:59174738-59174757 | None:intergenic | 75.0% | |
| !! | GGAGGGCGCCTGAGCCCTTC+TGG | - | chr3.1:59174741-59174760 | MS.gene039967:intron | 75.0% |
| ! | GGCGAGCGCGCCGGAGTCTC+AGG | - | chr3.1:59174709-59174728 | MS.gene039967:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 59172305 | 59176888 | 59172305 | ID=MS.gene039967 |
| chr3.1 | mRNA | 59172305 | 59176888 | 59172305 | ID=MS.gene039967.t1;Parent=MS.gene039967 |
| chr3.1 | exon | 59176783 | 59176888 | 59176783 | ID=MS.gene039967.t1.exon1;Parent=MS.gene039967.t1 |
| chr3.1 | CDS | 59176783 | 59176888 | 59176783 | ID=cds.MS.gene039967.t1;Parent=MS.gene039967.t1 |
| chr3.1 | exon | 59176482 | 59176603 | 59176482 | ID=MS.gene039967.t1.exon2;Parent=MS.gene039967.t1 |
| chr3.1 | CDS | 59176482 | 59176603 | 59176482 | ID=cds.MS.gene039967.t1;Parent=MS.gene039967.t1 |
| chr3.1 | exon | 59175738 | 59175848 | 59175738 | ID=MS.gene039967.t1.exon3;Parent=MS.gene039967.t1 |
| chr3.1 | CDS | 59175738 | 59175848 | 59175738 | ID=cds.MS.gene039967.t1;Parent=MS.gene039967.t1 |
| chr3.1 | exon | 59175420 | 59175608 | 59175420 | ID=MS.gene039967.t1.exon4;Parent=MS.gene039967.t1 |
| chr3.1 | CDS | 59175420 | 59175608 | 59175420 | ID=cds.MS.gene039967.t1;Parent=MS.gene039967.t1 |
| chr3.1 | exon | 59173424 | 59173549 | 59173424 | ID=MS.gene039967.t1.exon5;Parent=MS.gene039967.t1 |
| chr3.1 | CDS | 59173424 | 59173549 | 59173424 | ID=cds.MS.gene039967.t1;Parent=MS.gene039967.t1 |
| chr3.1 | exon | 59172305 | 59172820 | 59172305 | ID=MS.gene039967.t1.exon6;Parent=MS.gene039967.t1 |
| chr3.1 | CDS | 59172305 | 59172820 | 59172305 | ID=cds.MS.gene039967.t1;Parent=MS.gene039967.t1 |
| Gene Sequence |
| Protein sequence |
