Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040107.t1 | PNY09036.1 | 98.1 | 572 | 11 | 0 | 1 | 572 | 105 | 676 | 2.00E-235 | 825.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040107.t1 | Q9LM25 | 69.8 | 556 | 168 | 0 | 3 | 558 | 103 | 658 | 8.2e-161 | 568.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040107.t1 | A0A2K3P165 | 98.1 | 572 | 11 | 0 | 1 | 572 | 105 | 676 | 1.5e-235 | 825.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene27997 | MS.gene040107 | PPI |
| MS.gene040107 | MS.gene77496 | PPI |
| MS.gene045393 | MS.gene040107 | PPI |
| MS.gene040107 | MS.gene79861 | PPI |
| MS.gene040107 | MS.gene75708 | PPI |
| MS.gene47967 | MS.gene040107 | PPI |
| MS.gene040107 | MS.gene57360 | PPI |
| MS.gene030876 | MS.gene040107 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040107.t1 | MTR_8g107400 | 99.650 | 572 | 2 | 0 | 1 | 572 | 103 | 674 | 0.0 | 1176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040107.t1 | AT1G18260 | 80.804 | 547 | 105 | 0 | 3 | 549 | 103 | 649 | 0.0 | 946 |
| MS.gene040107.t1 | AT1G73570 | 68.393 | 560 | 132 | 3 | 3 | 560 | 104 | 620 | 0.0 | 795 |
Find 162 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCAGCAGCATTCCCTTTC+TGG | 0.111186 | 4.4:-209490 | None:intergenic |
| CTCAACCCAAGCTTCTAATT+TGG | 0.133073 | 4.4:-213297 | None:intergenic |
| GAACATGCTGCTTTACTAAT+TGG | 0.216409 | 4.4:+211191 | MS.gene040107:CDS |
| CTTTCAGATTCTCGAGTATC+AGG | 0.269138 | 4.4:+209466 | MS.gene040107:CDS |
| TTTCTGCAACTAATTTGTAT+AGG | 0.289820 | 4.4:-210920 | None:intergenic |
| GAACCATGCTGACAGTTTAT+TGG | 0.304241 | 4.4:+211570 | MS.gene040107:CDS |
| TTCGATGACAGGAGAATCTT+TGG | 0.308385 | 4.4:-209369 | None:intergenic |
| GCTCCATTGTGTAGCCTAAC+AGG | 0.313274 | 4.4:-209392 | None:intergenic |
| TCAACCCAAGCTTCTAATTT+GGG | 0.314522 | 4.4:-213296 | None:intergenic |
| CCAAGTTCATTAGGGCGATT+TGG | 0.319646 | 4.4:-213443 | None:intergenic |
| CTCTTACAAGCTTGTGGGTT+CGG | 0.324705 | 4.4:+211545 | MS.gene040107:CDS |
| CTCCTTTGTCGACGGCCTTA+AGG | 0.327936 | 4.4:-209589 | None:intergenic |
| TGGCAATATGCAATCTAAAA+TGG | 0.339071 | 4.4:+209156 | MS.gene040107:CDS |
| TTCTGCAACTAATTTGTATA+GGG | 0.339271 | 4.4:-210919 | None:intergenic |
| GCAGGCACACCAAGTTCATT+AGG | 0.341898 | 4.4:-213452 | None:intergenic |
| CCGGCTGCACAATCAGTGTT+AGG | 0.347506 | 4.4:+209055 | MS.gene040107:CDS |
| GCTTGGATTCTCGACAAATA+TGG | 0.347854 | 4.4:+211068 | MS.gene040107:CDS |
| GCCCTAGAAGCATACTTAAA+AGG | 0.356535 | 4.4:+210972 | MS.gene040107:CDS |
| CCACATAATTGATTCTTTGC+CGG | 0.356912 | 4.4:+213265 | MS.gene040107:CDS |
| TTGGGTTGAGAATGTGCTTT+TGG | 0.359424 | 4.4:+213310 | MS.gene040107:CDS |
| CAAAGGAGAGCCTCGCTCTA+TGG | 0.359917 | 4.4:+209604 | MS.gene040107:CDS |
| CGTTAAGCTTTATGCTGAAT+TGG | 0.360446 | 4.4:+209316 | MS.gene040107:CDS |
| CACCTCTATTCTGCTTATAA+TGG | 0.362654 | 4.4:+209716 | MS.gene040107:CDS |
| ACAATACACCCAGGTTATAA+TGG | 0.383073 | 4.4:-209997 | None:intergenic |
| ATTGGAGATGCATATTACTA+TGG | 0.384953 | 4.4:+211209 | MS.gene040107:CDS |
| GTATGCTTCTAGGGCCCATC+TGG | 0.385561 | 4.4:-210964 | None:intergenic |
| GCGAGCTGGTAGAAAGCCTT+TGG | 0.388487 | 4.4:-210097 | None:intergenic |
| CCTCGCTCTATGGAACTTCT+TGG | 0.389738 | 4.4:+209614 | MS.gene040107:CDS |
| GCACAAGCCATGTTCAATCT+TGG | 0.390604 | 4.4:+211412 | MS.gene040107:CDS |
| AGCAGCAGCATTCCCTTTCT+GGG | 0.397407 | 4.4:-209489 | None:intergenic |
| CAATTCAGCATAAAGCTTAA+CGG | 0.397810 | 4.4:-209315 | None:intergenic |
| AGCATGTGCATGGGTGAATC+TGG | 0.400739 | 4.4:+211098 | MS.gene040107:CDS |
| ATTGAAACAGCTGCAGAATC+TGG | 0.402527 | 4.4:+209028 | MS.gene040107:CDS |
| TTTGAGGCGTGACCATTCTA+AGG | 0.404190 | 4.4:+209553 | MS.gene040107:CDS |
| CATGGAGTTCTTTGTCCAGA+TGG | 0.413844 | 4.4:+210949 | MS.gene040107:CDS |
| GAGATATATGCCAGGGGAGC+AGG | 0.414002 | 4.4:+209638 | MS.gene040107:CDS |
| CTATCCCAAATTAGAAGCTT+GGG | 0.415557 | 4.4:+213292 | MS.gene040107:CDS |
| TCTCTCAACACCTGCTCCCC+TGG | 0.418996 | 4.4:-209648 | None:intergenic |
| AGCAGAATAGAGGTGGTGTT+TGG | 0.420812 | 4.4:-209708 | None:intergenic |
| TCAAAGGGATTGGAGTGAAA+AGG | 0.425059 | 4.4:+210023 | MS.gene040107:CDS |
| TCTATCCCAAATTAGAAGCT+TGG | 0.428097 | 4.4:+213291 | MS.gene040107:CDS |
| AGTAAGCCATTCAAAAGCTT+TGG | 0.432560 | 4.4:-209678 | None:intergenic |
| AAGCACTCAGAAAGTCTAAA+GGG | 0.435467 | 4.4:+209429 | MS.gene040107:CDS |
| ACTTTGGCCTTCGTGGTTTG+AGG | 0.440005 | 4.4:+209537 | MS.gene040107:CDS |
| TTGTGCATTAGATTGTGATT+TGG | 0.440437 | 4.4:-211395 | None:intergenic |
| CCAAATCGCCCTAATGAACT+TGG | 0.445548 | 4.4:+213443 | MS.gene040107:CDS |
| GTGGTGGCAAGCTTCTGAGC+AGG | 0.454049 | 4.4:+211163 | MS.gene040107:CDS |
| ACTGGCTCTTACAAGCTTGT+GGG | 0.457829 | 4.4:+211540 | MS.gene040107:CDS |
| CACAAGCCATGTTCAATCTT+GGG | 0.458951 | 4.4:+211413 | MS.gene040107:CDS |
| CTTGTAAGAGCCAGTGTGAC+TGG | 0.459303 | 4.4:-211532 | None:intergenic |
| CACTGGCTCTTACAAGCTTG+TGG | 0.460890 | 4.4:+211539 | MS.gene040107:CDS |
| CTGGTAGTACATGAACTAGA+TGG | 0.467890 | 4.4:-213477 | None:intergenic |
| TATTTGTACGTCAAAGGCTA+TGG | 0.472526 | 4.4:+209746 | MS.gene040107:CDS |
| AGGCAAGCTGTTGTTGTAGC+TGG | 0.473119 | 4.4:+213407 | MS.gene040107:CDS |
| ATCAGCGGGCACATTCTTTG+TGG | 0.476723 | 4.4:+211144 | MS.gene040107:CDS |
| CAGGCACACCAAGTTCATTA+GGG | 0.479473 | 4.4:-213451 | None:intergenic |
| GGCACTCTCATGGTTCCTTA+AGG | 0.482247 | 4.4:+209574 | MS.gene040107:CDS |
| CCTAACACTGATTGTGCAGC+CGG | 0.484541 | 4.4:-209055 | None:intergenic |
| TCTAATTTGGGATAGACATC+CGG | 0.486599 | 4.4:-213284 | None:intergenic |
| TTATCATCACTTTGCTTCAG+AGG | 0.489052 | 4.4:+209132 | MS.gene040107:CDS |
| CGGCTGCACAATCAGTGTTA+GGG | 0.491821 | 4.4:+209056 | MS.gene040107:CDS |
| CAAAGGGATTGGAGTGAAAA+GGG | 0.492230 | 4.4:+210024 | MS.gene040107:CDS |
| TCTTATGTCAGGGAACTGCC+AGG | 0.493614 | 4.4:+211338 | MS.gene040107:intron |
| ATGGAGTTCTTTGTCCAGAT+GGG | 0.494613 | 4.4:+210950 | MS.gene040107:CDS |
| TATCATCACTTTGCTTCAGA+GGG | 0.497408 | 4.4:+209133 | MS.gene040107:CDS |
| TACAAATTAGTTGCAGAAAG+AGG | 0.498474 | 4.4:+210924 | MS.gene040107:CDS |
| AGCTTCATCATAGTAACGCT+TGG | 0.499212 | 4.4:-211482 | None:intergenic |
| CATTCTTGAGTACAACATAT+AGG | 0.500669 | 4.4:-211009 | None:intergenic |
| CAGAAAGTCTAAAGGGGAAG+AGG | 0.501798 | 4.4:+209436 | MS.gene040107:CDS |
| AGCCTAACAGGTTCGATGAC+AGG | 0.503789 | 4.4:-209380 | None:intergenic |
| CTGGGTGTATTGTATCTCAA+AGG | 0.506647 | 4.4:+210007 | MS.gene040107:CDS |
| AGCAGCTCGGTCATAATCCC+TGG | 0.507473 | 4.4:-211356 | None:intergenic |
| CCCGCAGATACAGCACAGTT+AGG | 0.510812 | 4.4:-213373 | None:intergenic |
| CTGTGCTGTATCTGCGGGAG+AGG | 0.511204 | 4.4:+213378 | MS.gene040107:CDS |
| CTATATGTTGTACTCAAGAA+TGG | 0.515930 | 4.4:+211010 | MS.gene040107:CDS |
| TGATGCAGAAAGGCATCAGC+GGG | 0.520042 | 4.4:+211130 | MS.gene040107:CDS |
| TGCAGCTGTTTCAATCTCGC+CGG | 0.520981 | 4.4:-209020 | None:intergenic |
| TCTTGAACCCAACACCAAGA+TGG | 0.522594 | 4.4:-210129 | None:intergenic |
| AGCTAATGACTGGGGATGCT+AGG | 0.523232 | 4.4:+208981 | None:intergenic |
| ATCGGTTATTTGTACGTCAA+AGG | 0.524544 | 4.4:+209740 | MS.gene040107:CDS |
| AGCCTTTGGTTGACCGTGGT+TGG | 0.525956 | 4.4:-210083 | None:intergenic |
| GTATTGTATCTCAAAGGGAT+TGG | 0.527627 | 4.4:+210013 | MS.gene040107:CDS |
| GTGACTGGCAACTTAGCTGC+AGG | 0.528860 | 4.4:-211517 | None:intergenic |
| CAGTTAGGAGGCACGCAAAG+AGG | 0.529036 | 4.4:-213358 | None:intergenic |
| GCCGTCGCTAAGCTAATGAC+TGG | 0.530159 | 4.4:+208971 | None:intergenic |
| TCCTAACTGTGCTGTATCTG+CGG | 0.531215 | 4.4:+213372 | MS.gene040107:CDS |
| TGCCATTATAAGCAGAATAG+AGG | 0.532353 | 4.4:-209718 | None:intergenic |
| GAGATGCATATTACTATGGC+CGG | 0.532375 | 4.4:+211213 | MS.gene040107:CDS |
| TGGGTGTATTGTATCTCAAA+GGG | 0.534585 | 4.4:+210008 | MS.gene040107:CDS |
| GGTTGGAGGCCATTATAACC+TGG | 0.538907 | 4.4:+209988 | MS.gene040107:CDS |
| CCTAACTGTGCTGTATCTGC+GGG | 0.539131 | 4.4:+213373 | MS.gene040107:CDS |
| TCGAGTATCAGGCCCAGAAA+GGG | 0.539269 | 4.4:+209477 | MS.gene040107:CDS |
| TATTCTGCTTATAATGGCAT+CGG | 0.539588 | 4.4:+209722 | MS.gene040107:CDS |
| TACTCAAGAATGGCTGAGAT+GGG | 0.540274 | 4.4:+211020 | MS.gene040107:CDS |
| TTCTTGGAGAGATATATGCC+AGG | 0.541938 | 4.4:+209630 | MS.gene040107:CDS |
| CCGTCGCTAAGCTAATGACT+GGG | 0.541958 | 4.4:+208972 | None:intergenic |
| TGGCACAGAGCAATGCTGCT+TGG | 0.542410 | 4.4:+211051 | MS.gene040107:CDS |
| GAAGCACTCAGAAAGTCTAA+AGG | 0.545764 | 4.4:+209428 | MS.gene040107:CDS |
| CTCGAGTATCAGGCCCAGAA+AGG | 0.546827 | 4.4:+209476 | MS.gene040107:CDS |
| GTACTCAAGAATGGCTGAGA+TGG | 0.546890 | 4.4:+211019 | MS.gene040107:CDS |
| CATCACTTTGCTTCAGAGGG+TGG | 0.547314 | 4.4:+209136 | MS.gene040107:CDS |
| ACCATGAGAGTGCCTTAGAA+TGG | 0.547779 | 4.4:-209565 | None:intergenic |
| GGCATGTAAATTCTTTATTG+TGG | 0.547891 | 4.4:+210057 | MS.gene040107:CDS |
| CTCCTGTCATCGAACCTGTT+AGG | 0.549324 | 4.4:+209378 | MS.gene040107:CDS |
| AGCTAAGTTGCCAGTCACAC+TGG | 0.552431 | 4.4:+211522 | MS.gene040107:CDS |
| ATCTGCGGGAGAGGCAAAGA+AGG | 0.552687 | 4.4:+213387 | MS.gene040107:CDS |
| GAAGGTCAAGAGGAAGTCCT+TGG | 0.553360 | 4.4:-211453 | None:intergenic |
| AGCGGGCACATTCTTTGTGG+TGG | 0.557705 | 4.4:+211147 | MS.gene040107:CDS |
| AGTGAAAAGGGATGTCAAGT+TGG | 0.558486 | 4.4:+210036 | MS.gene040107:CDS |
| GCTGCTGATAACGAAGAGGT+TGG | 0.564461 | 4.4:+209971 | MS.gene040107:CDS |
| AGGATCATTGAAGAGGGCTC+CGG | 0.564891 | 4.4:+209001 | MS.gene040107:CDS |
| GTTCAAGAAGAACGTTCCAT+TGG | 0.568203 | 4.4:+210144 | MS.gene040107:CDS |
| CTGATGCAGAAAGGCATCAG+CGG | 0.569709 | 4.4:+211129 | MS.gene040107:CDS |
| GATGGAAAATCTTTGCGAGC+TGG | 0.569784 | 4.4:-210111 | None:intergenic |
| TACATGAACTAGATGGGTGC+AGG | 0.570563 | 4.4:-213470 | None:intergenic |
| GCTGATAACGAAGAGGTTGG+AGG | 0.571487 | 4.4:+209974 | MS.gene040107:CDS |
| TGGTGGCAAGCTTCTGAGCA+GGG | 0.573319 | 4.4:+211164 | MS.gene040107:CDS |
| TTCCTTAAGGCCGTCGACAA+AGG | 0.580842 | 4.4:+209587 | MS.gene040107:CDS |
| GGATTATGACCGAGCTGCTG+AGG | 0.581564 | 4.4:+211360 | MS.gene040107:CDS |
| CCGGCAAAGAATCAATTATG+TGG | 0.581872 | 4.4:-213265 | None:intergenic |
| GCATACTTAAAAGGCGATGT+CGG | 0.582369 | 4.4:+210981 | MS.gene040107:CDS |
| TGGTAGTACATGAACTAGAT+GGG | 0.582581 | 4.4:-213476 | None:intergenic |
| GCATGTAAGCCTCAGCAGCT+CGG | 0.584759 | 4.4:-211369 | None:intergenic |
| TGCCAACCACGGTCAACCAA+AGG | 0.585107 | 4.4:+210081 | MS.gene040107:CDS |
| CATGTACCCAAGATTGAACA+TGG | 0.588032 | 4.4:-211419 | None:intergenic |
| TACATGCATGAGCATGGCCA+AGG | 0.593236 | 4.4:+211436 | MS.gene040107:CDS |
| AGCTGCAGAATCTGGTCACC+CGG | 0.594384 | 4.4:+209036 | MS.gene040107:CDS |
| AGATGCATATTACTATGGCC+GGG | 0.594389 | 4.4:+211214 | MS.gene040107:CDS |
| CTTATGTCAGGGAACTGCCA+GGG | 0.594647 | 4.4:+211339 | MS.gene040107:intron |
| AGCTGTTGTTGTAGCTGGAG+AGG | 0.596230 | 4.4:+213412 | MS.gene040107:CDS |
| AGTTAGGAGGCACGCAAAGA+GGG | 0.597506 | 4.4:-213357 | None:intergenic |
| AATGGCTGAGATGGGCTATG+AGG | 0.600102 | 4.4:+211028 | MS.gene040107:CDS |
| ACCATTCTAAGGCACTCTCA+TGG | 0.600969 | 4.4:+209564 | MS.gene040107:CDS |
| CTTGGGTACATGCATGAGCA+TGG | 0.601824 | 4.4:+211430 | MS.gene040107:CDS |
| CTTAAAAGGCGATGTCGGCA+AGG | 0.604180 | 4.4:+210986 | MS.gene040107:CDS |
| TTTATTGTGGCTGCCAACCA+CGG | 0.607057 | 4.4:+210070 | MS.gene040107:CDS |
| TGGAGAACGAAGCATGTGCA+TGG | 0.609705 | 4.4:+211088 | MS.gene040107:CDS |
| TCTTGGAGAGATATATGCCA+GGG | 0.613142 | 4.4:+209631 | MS.gene040107:CDS |
| AGTAACGCTTGGCTAGATGA+AGG | 0.615333 | 4.4:-211471 | None:intergenic |
| GCAGATACAGCACAGTTAGG+AGG | 0.616456 | 4.4:-213370 | None:intergenic |
| GCTGCTGCTATGTACAAAGT+CGG | 0.618345 | 4.4:+209503 | MS.gene040107:CDS |
| TCACCAATAAACTGTCAGCA+TGG | 0.619540 | 4.4:-211573 | None:intergenic |
| GTTGGAGGCCATTATAACCT+GGG | 0.621285 | 4.4:+209989 | MS.gene040107:CDS |
| CTAACACTGATTGTGCAGCC+GGG | 0.623985 | 4.4:-209054 | None:intergenic |
| TTGGCTAGATGAAGGTCAAG+AGG | 0.635355 | 4.4:-211463 | None:intergenic |
| GGATGCTAGGATCATTGAAG+AGG | 0.639298 | 4.4:+208994 | MS.gene040107:CDS |
| GATGCTAGGATCATTGAAGA+GGG | 0.639734 | 4.4:+208995 | MS.gene040107:CDS |
| AGCACTCAGAAAGTCTAAAG+GGG | 0.648367 | 4.4:+209430 | MS.gene040107:CDS |
| CATCTGGACAAAGAACTCCA+TGG | 0.650425 | 4.4:-210948 | None:intergenic |
| GCGAGGCTCTCCTTTGTCGA+CGG | 0.651834 | 4.4:-209597 | None:intergenic |
| AGAAAGCCTTTGGTTGACCG+TGG | 0.656771 | 4.4:-210087 | None:intergenic |
| CATTATAAGCAGAATAGAGG+TGG | 0.658072 | 4.4:-209715 | None:intergenic |
| GGCTGAGATGGGCTATGAGG+TGG | 0.663373 | 4.4:+211031 | MS.gene040107:CDS |
| CCAAGAAGTTCCATAGAGCG+AGG | 0.664738 | 4.4:-209614 | None:intergenic |
| TAGTTGCAGAAAGAGGTCCA+TGG | 0.680024 | 4.4:+210931 | MS.gene040107:CDS |
| AAAGGCTGCTGATAACGAAG+AGG | 0.689088 | 4.4:+209967 | MS.gene040107:CDS |
| CTTTGAGATACAATACACCC+AGG | 0.692198 | 4.4:-210006 | None:intergenic |
| GGAGAACGAAGCATGTGCAT+GGG | 0.696482 | 4.4:+211089 | MS.gene040107:CDS |
| CGTCGCTAAGCTAATGACTG+GGG | 0.713359 | 4.4:+208973 | None:intergenic |
| CTTGGAGAGATATATGCCAG+GGG | 0.717789 | 4.4:+209632 | MS.gene040107:CDS |
| GAACCTGTTAGGCTACACAA+TGG | 0.719174 | 4.4:+209389 | MS.gene040107:CDS |
| GGTCACGCCTCAAACCACGA+AGG | 0.781390 | 4.4:-209544 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAATTATGAAAG+AGG | + | chr4.4:210468-210487 | MS.gene040107:intron | 10.0% |
| !! | AATAATATATTAAAATAGGT+TGG | - | chr4.4:211897-211916 | None:intergenic | 10.0% |
| !! | GAGTAATAATATATTAAAAT+AGG | - | chr4.4:211901-211920 | None:intergenic | 10.0% |
| !! | TCATTAATTTAATTAAGAAT+AGG | - | chr4.4:209242-209261 | None:intergenic | 10.0% |
| !!! | AAAAAGTAAATTTTAAAAAG+CGG | - | chr4.4:211845-211864 | None:intergenic | 10.0% |
| !!! | TTATAATAAATATGTTTCTA+AGG | - | chr4.4:211923-211942 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTGCAAATT+CGG | - | chr4.4:210458-210477 | None:intergenic | 10.0% |
| !! | AATATTAAATTTGTGATCTT+AGG | + | chr4.4:210890-210909 | MS.gene040107:intron | 15.0% |
| !! | AATGAAGACTAATATTATTT+GGG | + | chr4.4:209853-209872 | MS.gene040107:intron | 15.0% |
| !! | ACGATTCATAAATTTAATAT+TGG | - | chr4.4:210801-210820 | None:intergenic | 15.0% |
| !! | CGATTCATAAATTTAATATT+GGG | - | chr4.4:210800-210819 | None:intergenic | 15.0% |
| !! | GAATGGTAATAAAAAAAAAA+AGG | + | chr4.4:213003-213022 | MS.gene040107:intron | 15.0% |
| !! | TAAAGAAAGAAAAAAATGTA+AGG | - | chr4.4:209808-209827 | None:intergenic | 15.0% |
| !! | TATATTAAAATAAATTGCAG+AGG | - | chr4.4:210267-210286 | None:intergenic | 15.0% |
| !! | TTATGATATAATAGTCATTA+GGG | - | chr4.4:210837-210856 | None:intergenic | 15.0% |
| !!! | AAAAGTAAATTTTAAAAAGC+GGG | - | chr4.4:211844-211863 | None:intergenic | 15.0% |
| !!! | ATACTATTTTTCGATAAAAT+AGG | - | chr4.4:213056-213075 | None:intergenic | 15.0% |
| !!! | TAAAAAACTTTTTTCAAAAG+AGG | - | chr4.4:211953-211972 | None:intergenic | 15.0% |
| !!! | TATTATATTCCCTATTTTTA+AGG | - | chr4.4:212755-212774 | None:intergenic | 15.0% |
| !! | ATAATTATGATGGTCATTAT+TGG | + | chr4.4:210760-210779 | MS.gene040107:intron | 20.0% |
| !! | ATGAAGACTAATATTATTTG+GGG | + | chr4.4:209854-209873 | MS.gene040107:intron | 20.0% |
| !! | CTTATGATATAATAGTCATT+AGG | - | chr4.4:210838-210857 | None:intergenic | 20.0% |
| !! | GAATGAAGACTAATATTATT+TGG | + | chr4.4:209852-209871 | MS.gene040107:intron | 20.0% |
| !! | GTATTTAGAAAAAAGATGTT+TGG | + | chr4.4:212705-212724 | MS.gene040107:intron | 20.0% |
| !! | GTTAACATTATAATATTCCA+AGG | + | chr4.4:212727-212746 | MS.gene040107:intron | 20.0% |
| !! | TCATTAGAACATAATTATGA+TGG | + | chr4.4:210750-210769 | MS.gene040107:intron | 20.0% |
| !! | TTACCTATGATCTATTTAAA+TGG | + | chr4.4:212285-212304 | MS.gene040107:intron | 20.0% |
| !! | TTATGTTCTAATGAATTATG+TGG | - | chr4.4:210744-210763 | None:intergenic | 20.0% |
| !!! | AAAAGTTTTCCAAAAGAAAA+TGG | - | chr4.4:212827-212846 | None:intergenic | 20.0% |
| !!! | ATGTGCTTATTGTTTTTATT+AGG | + | chr4.4:213241-213260 | MS.gene040107:intron | 20.0% |
| !!! | ATTTTTATGATTTTATTCCC+AGG | + | chr4.4:212915-212934 | MS.gene040107:intron | 20.0% |
| !!! | GGAAATTTGGATTTTTAATA+CGG | + | chr4.4:211772-211791 | MS.gene040107:intron | 20.0% |
| !!! | TATAAAAAATAGAGTTTTCG+CGG | + | chr4.4:212049-212068 | MS.gene040107:intron | 20.0% |
| !!! | TGATGAAGTTTTTAATATTG+CGG | + | chr4.4:212408-212427 | MS.gene040107:intron | 20.0% |
| !!! | TTTTGTTTTGTATTATACAC+TGG | + | chr4.4:210414-210433 | MS.gene040107:intron | 20.0% |
| ! | AAATGAACATAAACTACAAC+AGG | - | chr4.4:212231-212250 | None:intergenic | 25.0% |
| ! | AACAGTGAATACTGAATTAA+TGG | - | chr4.4:210692-210711 | None:intergenic | 25.0% |
| ! | AAGTTATATTTGTAGATTCC+TGG | - | chr4.4:212936-212955 | None:intergenic | 25.0% |
| ! | AGAAAAAATAACACAACAGA+AGG | - | chr4.4:213180-213199 | None:intergenic | 25.0% |
| ! | AGTAAACTTGTAACAAACAT+AGG | + | chr4.4:212885-212904 | MS.gene040107:intron | 25.0% |
| ! | AGTTATATTTGTAGATTCCT+GGG | - | chr4.4:212935-212954 | None:intergenic | 25.0% |
| ! | AGTTTACTAAATTCTATTCC+CGG | - | chr4.4:212873-212892 | None:intergenic | 25.0% |
| ! | ATTTCTACCTTTATATTCCA+AGG | - | chr4.4:212674-212693 | None:intergenic | 25.0% |
| ! | CATTGGAGTAAAATACAAAT+TGG | - | chr4.4:213088-213107 | None:intergenic | 25.0% |
| ! | CCAAAAAATGTACTAAGTAA+GGG | + | chr4.4:212603-212622 | MS.gene040107:intron | 25.0% |
| ! | GTTGTAGTTTATGTTCATTT+AGG | + | chr4.4:212231-212250 | MS.gene040107:intron | 25.0% |
| ! | TACATAACATTCATTCTGTA+TGG | + | chr4.4:209830-209849 | MS.gene040107:intron | 25.0% |
| ! | TAGCCATTTAAATAGATCAT+AGG | - | chr4.4:212291-212310 | None:intergenic | 25.0% |
| ! | TTATTAGCACGTATATTTGT+TGG | - | chr4.4:210872-210891 | None:intergenic | 25.0% |
| !! | AAGGTAGAAATTTTATTCCA+AGG | + | chr4.4:212683-212702 | MS.gene040107:intron | 25.0% |
| !! | AATTTGGATTTTTAATACGG+AGG | + | chr4.4:211775-211794 | MS.gene040107:intron | 25.0% |
| !! | ATAAAAAATAGAGTTTTCGC+GGG | + | chr4.4:212050-212069 | MS.gene040107:intron | 25.0% |
| !! | ATTAAGAATTAGCTTACCAA+TGG | - | chr4.4:210163-210182 | None:intergenic | 25.0% |
| !! | TTCTGCAACTAATTTGTATA+GGG | - | chr4.4:210922-210941 | None:intergenic | 25.0% |
| !! | TTTCTGCAACTAATTTGTAT+AGG | - | chr4.4:210923-210942 | None:intergenic | 25.0% |
| !!! | ATTATTGTGTTTTGTTGCTA+TGG | + | chr4.4:211993-212012 | MS.gene040107:intron | 25.0% |
| !!! | CATCTTTTTTCTAAATACCT+TGG | - | chr4.4:212703-212722 | None:intergenic | 25.0% |
| !!! | CCTTACTTAGTACATTTTTT+GGG | - | chr4.4:212605-212624 | None:intergenic | 25.0% |
| !!! | CTTACTTAGTACATTTTTTG+GGG | - | chr4.4:212604-212623 | None:intergenic | 25.0% |
| !!! | GAAAAATTGTTGATTAGCTT+AGG | + | chr4.4:210213-210232 | MS.gene040107:intron | 25.0% |
| !!! | TTAAAATAGGTTGGTACTTA+TGG | - | chr4.4:211888-211907 | None:intergenic | 25.0% |
| !!! | TTACTTAGTACATTTTTTGG+GGG | - | chr4.4:212603-212622 | None:intergenic | 25.0% |
| !!! | TTTTTTTTATTACCATTCCC+CGG | - | chr4.4:213001-213020 | None:intergenic | 25.0% |
| AATTAGTAAGTTGTTATGGG+CGG | + | chr4.4:210565-210584 | MS.gene040107:intron | 30.0% | |
| ACTAAACCAAACTTATGGTT+CGG | - | chr4.4:210507-210526 | None:intergenic | 30.0% | |
| AGTGTACCAAATTTATTCCT+AGG | + | chr4.4:212639-212658 | MS.gene040107:intron | 30.0% | |
| AGTTTATTGGTGAGTTTCTT+TGG | + | chr4.4:211583-211602 | MS.gene040107:intron | 30.0% | |
| ATAGATATGAGTAGGAAACA+AGG | - | chr4.4:210326-210345 | None:intergenic | 30.0% | |
| ATATTATTTGGGGAATGCAA+AGG | + | chr4.4:209864-209883 | MS.gene040107:intron | 30.0% | |
| ATCACGTAATAGATATGAGT+AGG | - | chr4.4:210334-210353 | None:intergenic | 30.0% | |
| ATTGGAGATGCATATTACTA+TGG | + | chr4.4:211209-211228 | MS.gene040107:CDS | 30.0% | |
| CAAGAACTAAACCAAACTTA+TGG | - | chr4.4:210512-210531 | None:intergenic | 30.0% | |
| CAATTCAGCATAAAGCTTAA+CGG | - | chr4.4:209318-209337 | None:intergenic | 30.0% | |
| CATTCTTGAGTACAACATAT+AGG | - | chr4.4:211012-211031 | None:intergenic | 30.0% | |
| CCCAAAAAATGTACTAAGTA+AGG | + | chr4.4:212602-212621 | MS.gene040107:intron | 30.0% | |
| CTATATGTTGTACTCAAGAA+TGG | + | chr4.4:211010-211029 | MS.gene040107:CDS | 30.0% | |
| GCACTTGCATTAATAAAAGA+AGG | - | chr4.4:210189-210208 | None:intergenic | 30.0% | |
| GCTATTCCTAGGAATAAATT+TGG | - | chr4.4:212648-212667 | None:intergenic | 30.0% | |
| GGCATGTAAATTCTTTATTG+TGG | + | chr4.4:210057-210076 | MS.gene040107:CDS | 30.0% | |
| GGGAATTAGTAAGTTGTTAT+GGG | + | chr4.4:210562-210581 | MS.gene040107:intron | 30.0% | |
| GTTTACTAAATTCTATTCCC+GGG | - | chr4.4:212872-212891 | None:intergenic | 30.0% | |
| TACAAATTAGTTGCAGAAAG+AGG | + | chr4.4:210924-210943 | MS.gene040107:CDS | 30.0% | |
| TAGCATTCCTTGGAATATAA+AGG | + | chr4.4:212664-212683 | MS.gene040107:intron | 30.0% | |
| TATTATTTGGGGAATGCAAA+GGG | + | chr4.4:209865-209884 | MS.gene040107:intron | 30.0% | |
| TATTCTGCTTATAATGGCAT+CGG | + | chr4.4:209722-209741 | MS.gene040107:CDS | 30.0% | |
| TCCAAGGAACCTTAAAAATA+GGG | + | chr4.4:212743-212762 | MS.gene040107:intron | 30.0% | |
| TGAACATTCAATTTAAGCCA+CGG | + | chr4.4:211278-211297 | MS.gene040107:intron | 30.0% | |
| TGGCAATATGCAATCTAAAA+TGG | + | chr4.4:209156-209175 | MS.gene040107:CDS | 30.0% | |
| TGGGAATTAGTAAGTTGTTA+TGG | + | chr4.4:210561-210580 | MS.gene040107:intron | 30.0% | |
| TTCCAAGGAACCTTAAAAAT+AGG | + | chr4.4:212742-212761 | MS.gene040107:intron | 30.0% | |
| TTGAGACAGAATATCATATC+AGG | - | chr4.4:212265-212284 | None:intergenic | 30.0% | |
| TTGTGCATTAGATTGTGATT+TGG | - | chr4.4:211398-211417 | None:intergenic | 30.0% | |
| ! | AATTTTATTCCCATCTCCAT+GGG | + | chr4.4:212788-212807 | MS.gene040107:intron | 30.0% |
| ! | AGTTTTCCAAAAGAAAATGG+TGG | - | chr4.4:212824-212843 | None:intergenic | 30.0% |
| ! | GTTTTCCAAAAGAAAATGGT+GGG | - | chr4.4:212823-212842 | None:intergenic | 30.0% |
| ! | TAATTTTATTCCCATCTCCA+TGG | + | chr4.4:212787-212806 | MS.gene040107:intron | 30.0% |
| ! | TCATAACGAACGTTCAATTT+TGG | + | chr4.4:209264-209283 | MS.gene040107:intron | 30.0% |
| ! | TGGAAAACTTTTCTATTTCC+AGG | + | chr4.4:212835-212854 | MS.gene040107:intron | 30.0% |
| ! | TTATTCCCACCATTTTCTTT+TGG | + | chr4.4:212815-212834 | MS.gene040107:intron | 30.0% |
| ! | TTCAAATTTTACCCCTGATA+TGG | + | chr4.4:212127-212146 | MS.gene040107:intron | 30.0% |
| !! | TAAATTTTAAAAAGCGGGTG+CGG | - | chr4.4:211839-211858 | None:intergenic | 30.0% |
| !!! | CCCTTACTTAGTACATTTTT+TGG | - | chr4.4:212606-212625 | None:intergenic | 30.0% |
| !!! | TTTTTTTATTACCATTCCCC+GGG | - | chr4.4:213000-213019 | None:intergenic | 30.0% |
| AAGCACTCAGAAAGTCTAAA+GGG | + | chr4.4:209429-209448 | MS.gene040107:CDS | 35.0% | |
| AATAAAGTTCCCATGGAGAT+GGG | - | chr4.4:212800-212819 | None:intergenic | 35.0% | |
| ACAATAAGCACATCACAATC+AGG | - | chr4.4:213234-213253 | None:intergenic | 35.0% | |
| ACAATACACCCAGGTTATAA+TGG | - | chr4.4:210000-210019 | None:intergenic | 35.0% | |
| AGTAAGCCATTCAAAAGCTT+TGG | - | chr4.4:209681-209700 | None:intergenic | 35.0% | |
| ATCGGTTATTTGTACGTCAA+AGG | + | chr4.4:209740-209759 | MS.gene040107:CDS | 35.0% | |
| ATTATTTGGGGAATGCAAAG+GGG | + | chr4.4:209866-209885 | MS.gene040107:intron | 35.0% | |
| CAATGTCTACTTCCACTTAT+TGG | - | chr4.4:211639-211658 | None:intergenic | 35.0% | |
| CACCTCTATTCTGCTTATAA+TGG | + | chr4.4:209716-209735 | MS.gene040107:CDS | 35.0% | |
| CATTATAAGCAGAATAGAGG+TGG | - | chr4.4:209718-209737 | None:intergenic | 35.0% | |
| CTATCCCAAATTAGAAGCTT+GGG | + | chr4.4:213292-213311 | MS.gene040107:CDS | 35.0% | |
| CTTGTCTTTCTCTTATGTCA+GGG | + | chr4.4:211328-211347 | MS.gene040107:intron | 35.0% | |
| GTATTGTATCTCAAAGGGAT+TGG | + | chr4.4:210013-210032 | MS.gene040107:CDS | 35.0% | |
| TAAATGACCGAGTTGTGTTA+AGG | - | chr4.4:212462-212481 | None:intergenic | 35.0% | |
| TATCATCACTTTGCTTCAGA+GGG | + | chr4.4:209133-209152 | MS.gene040107:CDS | 35.0% | |
| TATTTGTACGTCAAAGGCTA+TGG | + | chr4.4:209746-209765 | MS.gene040107:CDS | 35.0% | |
| TCAACCCAAGCTTCTAATTT+GGG | - | chr4.4:213299-213318 | None:intergenic | 35.0% | |
| TCTATCCCAAATTAGAAGCT+TGG | + | chr4.4:213291-213310 | MS.gene040107:CDS | 35.0% | |
| TCTCTTTCCTTAACACAACT+CGG | + | chr4.4:212452-212471 | MS.gene040107:intron | 35.0% | |
| TCTTGTCTTTCTCTTATGTC+AGG | + | chr4.4:211327-211346 | MS.gene040107:intron | 35.0% | |
| TGCCATTATAAGCAGAATAG+AGG | - | chr4.4:209721-209740 | None:intergenic | 35.0% | |
| TGGGTGTATTGTATCTCAAA+GGG | + | chr4.4:210008-210027 | MS.gene040107:CDS | 35.0% | |
| TTATCATCACTTTGCTTCAG+AGG | + | chr4.4:209132-209151 | MS.gene040107:CDS | 35.0% | |
| ! | AACATTTTCCCCAATGTAGT+GGG | + | chr4.4:212369-212388 | MS.gene040107:intron | 35.0% |
| ! | AATCAGTGTTAGGGTTTTTG+TGG | + | chr4.4:209065-209084 | MS.gene040107:CDS | 35.0% |
| ! | ACTACACCAAAGCTTTTGAA+TGG | + | chr4.4:209672-209691 | MS.gene040107:CDS | 35.0% |
| ! | AGTTCATTTTCTTTCACCAG+TGG | - | chr4.4:212521-212540 | None:intergenic | 35.0% |
| ! | ATCAGTGTTAGGGTTTTTGT+GGG | + | chr4.4:209066-209085 | MS.gene040107:CDS | 35.0% |
| ! | ATTTTACCCCTGATATGGTT+TGG | + | chr4.4:212132-212151 | MS.gene040107:intron | 35.0% |
| ! | CCACATAATTGATTCTTTGC+CGG | + | chr4.4:213265-213284 | MS.gene040107:CDS | 35.0% |
| ! | CGTTAAGCTTTATGCTGAAT+TGG | + | chr4.4:209316-209335 | MS.gene040107:CDS | 35.0% |
| ! | GGTTTTTCCCCGTTAAATTT+GGG | - | chr4.4:211728-211747 | None:intergenic | 35.0% |
| ! | GTTTTTCCCCGTTAAATTTG+GGG | - | chr4.4:211727-211746 | None:intergenic | 35.0% |
| ! | TATATTGTCTGTGTTTTCCC+TGG | + | chr4.4:210712-210731 | MS.gene040107:intron | 35.0% |
| ! | TCTAATTTGGGATAGACATC+CGG | - | chr4.4:213287-213306 | None:intergenic | 35.0% |
| ! | TTCCAGGAACATTTTATACC+CGG | + | chr4.4:212851-212870 | MS.gene040107:intron | 35.0% |
| ! | TTGGATTTTTAATACGGAGG+CGG | + | chr4.4:211778-211797 | MS.gene040107:intron | 35.0% |
| ! | TTTTACCCCTGATATGGTTT+GGG | + | chr4.4:212133-212152 | MS.gene040107:intron | 35.0% |
| !! | AAATTTTAAAAAGCGGGTGC+GGG | - | chr4.4:211838-211857 | None:intergenic | 35.0% |
| !! | AAGATTTTCCATCTTGGTGT+TGG | + | chr4.4:210121-210140 | MS.gene040107:CDS | 35.0% |
| !! | ATTATACACTGGTTCTGATC+CGG | + | chr4.4:210425-210444 | MS.gene040107:intron | 35.0% |
| !! | GAACATGCTGCTTTACTAAT+TGG | + | chr4.4:211191-211210 | MS.gene040107:CDS | 35.0% |
| !! | GAGAGTATCATATTGACATC+AGG | - | chr4.4:210245-210264 | None:intergenic | 35.0% |
| !! | GCCTTTTAAGTATGCTTCTA+GGG | - | chr4.4:210976-210995 | None:intergenic | 35.0% |
| !!! | AGATTTTCCATCTTGGTGTT+GGG | + | chr4.4:210122-210141 | MS.gene040107:CDS | 35.0% |
| !!! | GGCAAAGGAGTATTTTGAAA+AGG | + | chr4.4:209949-209968 | MS.gene040107:intron | 35.0% |
| !!! | TCCCTATTTTTAAGGTTCCT+TGG | - | chr4.4:212747-212766 | None:intergenic | 35.0% |
| !!! | TTAGTACATTTTTTGGGGGT+GGG | - | chr4.4:212599-212618 | None:intergenic | 35.0% |
| ACAACAGGTAAGTCTAGACA+TGG | - | chr4.4:212216-212235 | None:intergenic | 40.0% | |
| ACTGAACCGAACCATAAGTT+TGG | + | chr4.4:210498-210517 | MS.gene040107:intron | 40.0% | |
| ACTTGAAACAAACACACCCT+AGG | + | chr4.4:212952-212971 | MS.gene040107:intron | 40.0% | |
| AGATGCATATTACTATGGCC+GGG | + | chr4.4:211214-211233 | MS.gene040107:CDS | 40.0% | |
| AGCACTCAGAAAGTCTAAAG+GGG | + | chr4.4:209430-209449 | MS.gene040107:CDS | 40.0% | |
| AGCTTCATCATAGTAACGCT+TGG | - | chr4.4:211485-211504 | None:intergenic | 40.0% | |
| AGTGAAAAGGGATGTCAAGT+TGG | + | chr4.4:210036-210055 | MS.gene040107:CDS | 40.0% | |
| ATGGAGTTCTTTGTCCAGAT+GGG | + | chr4.4:210950-210969 | MS.gene040107:CDS | 40.0% | |
| ATTGAAACAGCTGCAGAATC+TGG | + | chr4.4:209028-209047 | MS.gene040107:CDS | 40.0% | |
| CAAAGGGATTGGAGTGAAAA+GGG | + | chr4.4:210024-210043 | MS.gene040107:CDS | 40.0% | |
| CACAAGCCATGTTCAATCTT+GGG | + | chr4.4:211413-211432 | MS.gene040107:CDS | 40.0% | |
| CAGTTTCTTGTGTGAGTTAC+AGG | + | chr4.4:209928-209947 | MS.gene040107:intron | 40.0% | |
| CATGTACCCAAGATTGAACA+TGG | - | chr4.4:211422-211441 | None:intergenic | 40.0% | |
| CCGGCAAAGAATCAATTATG+TGG | - | chr4.4:213268-213287 | None:intergenic | 40.0% | |
| CGGTCATTTATATGAACGCT+TGG | + | chr4.4:212472-212491 | MS.gene040107:intron | 40.0% | |
| CTCAACCCAAGCTTCTAATT+TGG | - | chr4.4:213300-213319 | None:intergenic | 40.0% | |
| CTGGGTGTATTGTATCTCAA+AGG | + | chr4.4:210007-210026 | MS.gene040107:CDS | 40.0% | |
| CTTTCAGATTCTCGAGTATC+AGG | + | chr4.4:209466-209485 | MS.gene040107:CDS | 40.0% | |
| GAACCATGCTGACAGTTTAT+TGG | + | chr4.4:211570-211589 | MS.gene040107:CDS | 40.0% | |
| GAATAAAGTTCCCATGGAGA+TGG | - | chr4.4:212801-212820 | None:intergenic | 40.0% | |
| GAATTATGTGGTACAGACCA+GGG | - | chr4.4:210732-210751 | None:intergenic | 40.0% | |
| GAGATGCATATTACTATGGC+CGG | + | chr4.4:211213-211232 | MS.gene040107:CDS | 40.0% | |
| GATGCTAGGATCATTGAAGA+GGG | + | chr4.4:208995-209014 | MS.gene040107:CDS | 40.0% | |
| GCATACTTAAAAGGCGATGT+CGG | + | chr4.4:210981-211000 | MS.gene040107:CDS | 40.0% | |
| GCTTGGATTCTCGACAAATA+TGG | + | chr4.4:211068-211087 | MS.gene040107:CDS | 40.0% | |
| GTTCAAGAAGAACGTTCCAT+TGG | + | chr4.4:210144-210163 | MS.gene040107:CDS | 40.0% | |
| TACTCAAGAATGGCTGAGAT+GGG | + | chr4.4:211020-211039 | MS.gene040107:CDS | 40.0% | |
| TCAAAGGGATTGGAGTGAAA+AGG | + | chr4.4:210023-210042 | MS.gene040107:CDS | 40.0% | |
| TCACCAATAAACTGTCAGCA+TGG | - | chr4.4:211576-211595 | None:intergenic | 40.0% | |
| TCCAAAGTCAATCACATACC+CGG | - | chr4.4:211235-211254 | None:intergenic | 40.0% | |
| TCGTAGCAACAACCAATAAG+TGG | + | chr4.4:211624-211643 | MS.gene040107:intron | 40.0% | |
| TCTTGGAGAGATATATGCCA+GGG | + | chr4.4:209631-209650 | MS.gene040107:CDS | 40.0% | |
| TGAATTATGTGGTACAGACC+AGG | - | chr4.4:210733-210752 | None:intergenic | 40.0% | |
| TTCCAAGGAATGCTATTCCT+AGG | - | chr4.4:212659-212678 | None:intergenic | 40.0% | |
| TTCCTAGGAATAGCATTCCT+TGG | + | chr4.4:212654-212673 | MS.gene040107:intron | 40.0% | |
| TTCGATGACAGGAGAATCTT+TGG | - | chr4.4:209372-209391 | None:intergenic | 40.0% | |
| TTCTTGGAGAGATATATGCC+AGG | + | chr4.4:209630-209649 | MS.gene040107:CDS | 40.0% | |
| TTTACCCCTGATATGGTTTG+GGG | + | chr4.4:212134-212153 | MS.gene040107:intron | 40.0% | |
| ! | AAAAATAGAGTTTTCGCGGG+TGG | + | chr4.4:212053-212072 | MS.gene040107:intron | 40.0% |
| ! | AAAACCGATTTAACTGGGTG+CGG | + | chr4.4:211742-211761 | MS.gene040107:intron | 40.0% |
| ! | AAAATAGAGTTTTCGCGGGT+GGG | + | chr4.4:212054-212073 | MS.gene040107:intron | 40.0% |
| ! | AACAGAAGGAGTCGACTTAA+AGG | - | chr4.4:213166-213185 | None:intergenic | 40.0% |
| ! | CAACATTTTCCCCAATGTAG+TGG | + | chr4.4:212368-212387 | MS.gene040107:intron | 40.0% |
| ! | CGGTTTTTCCCCGTTAAATT+TGG | - | chr4.4:211729-211748 | None:intergenic | 40.0% |
| ! | CTCGCAAAGATTTTCCATCT+TGG | + | chr4.4:210115-210134 | MS.gene040107:CDS | 40.0% |
| ! | GAAGCACTCAGAAAGTCTAA+AGG | + | chr4.4:209428-209447 | MS.gene040107:CDS | 40.0% |
| ! | GAATAGGTCTTTTCAGAGAG+AGG | + | chr4.4:209089-209108 | MS.gene040107:CDS | 40.0% |
| ! | GCCCTAGAAGCATACTTAAA+AGG | + | chr4.4:210972-210991 | MS.gene040107:CDS | 40.0% |
| ! | GGGGAAAAACCGATTTAACT+GGG | + | chr4.4:211737-211756 | MS.gene040107:intron | 40.0% |
| ! | GTCGGTCTCTTTTACTACTT+TGG | + | chr4.4:209521-209540 | MS.gene040107:CDS | 40.0% |
| ! | TCAGTGTTAGGGTTTTTGTG+GGG | + | chr4.4:209067-209086 | MS.gene040107:CDS | 40.0% |
| ! | TCCAGGAACATTTTATACCC+GGG | + | chr4.4:212852-212871 | MS.gene040107:intron | 40.0% |
| ! | TGGATTTTTAATACGGAGGC+GGG | + | chr4.4:211779-211798 | MS.gene040107:intron | 40.0% |
| ! | TTAGGGTTTTTGTGGGGAAT+AGG | + | chr4.4:209073-209092 | MS.gene040107:CDS | 40.0% |
| ! | TTGCAAATTCGGTTCGAAAC+CGG | - | chr4.4:210447-210466 | None:intergenic | 40.0% |
| !! | AATTTTAAAAAGCGGGTGCG+GGG | - | chr4.4:211837-211856 | None:intergenic | 40.0% |
| !! | CGCCTTTTAAGTATGCTTCT+AGG | - | chr4.4:210977-210996 | None:intergenic | 40.0% |
| !! | CTTTGAGATACAATACACCC+AGG | - | chr4.4:210009-210028 | None:intergenic | 40.0% |
| !! | GATTTTGCACTGATGCAGAA+AGG | + | chr4.4:211120-211139 | MS.gene040107:CDS | 40.0% |
| !! | GTTGCTACGAAGTATTGTAG+CGG | - | chr4.4:211614-211633 | None:intergenic | 40.0% |
| !! | TGTGATCGTGAGTTTTTCAG+TGG | + | chr4.4:210353-210372 | MS.gene040107:intron | 40.0% |
| !! | TTGCTACGAAGTATTGTAGC+GGG | - | chr4.4:211613-211632 | None:intergenic | 40.0% |
| !! | TTTTACTACTTTGGCCTTCG+TGG | + | chr4.4:209530-209549 | MS.gene040107:CDS | 40.0% |
| !!! | CTTAGTACATTTTTTGGGGG+TGG | - | chr4.4:212600-212619 | None:intergenic | 40.0% |
| !!! | TTGGGTTGAGAATGTGCTTT+TGG | + | chr4.4:213310-213329 | MS.gene040107:CDS | 40.0% |
| AGCAGAATAGAGGTGGTGTT+TGG | - | chr4.4:209711-209730 | None:intergenic | 45.0% | |
| AGTAACGCTTGGCTAGATGA+AGG | - | chr4.4:211474-211493 | None:intergenic | 45.0% | |
| ATTCCCAAAAGATGCCTCCT+AGG | - | chr4.4:210548-210567 | None:intergenic | 45.0% | |
| CAGAAAGTCTAAAGGGGAAG+AGG | + | chr4.4:209436-209455 | MS.gene040107:CDS | 45.0% | |
| CAGGCACACCAAGTTCATTA+GGG | - | chr4.4:213454-213473 | None:intergenic | 45.0% | |
| CATCTGGACAAAGAACTCCA+TGG | - | chr4.4:210951-210970 | None:intergenic | 45.0% | |
| CATGGAGTTCTTTGTCCAGA+TGG | + | chr4.4:210949-210968 | MS.gene040107:CDS | 45.0% | |
| CCAAATCGCCCTAATGAACT+TGG | + | chr4.4:213443-213462 | MS.gene040107:CDS | 45.0% | |
| CCAAGTTCATTAGGGCGATT+TGG | - | chr4.4:213446-213465 | None:intergenic | 45.0% | |
| CTCTTACAAGCTTGTGGGTT+CGG | + | chr4.4:211545-211564 | MS.gene040107:CDS | 45.0% | |
| CTTGGAGAGATATATGCCAG+GGG | + | chr4.4:209632-209651 | MS.gene040107:CDS | 45.0% | |
| CTTGTGTGAGTTACAGGCAA+AGG | + | chr4.4:209934-209953 | MS.gene040107:intron | 45.0% | |
| GAACCTGTTAGGCTACACAA+TGG | + | chr4.4:209389-209408 | MS.gene040107:CDS | 45.0% | |
| GATGGAAAATCTTTGCGAGC+TGG | - | chr4.4:210114-210133 | None:intergenic | 45.0% | |
| GCACAAGCCATGTTCAATCT+TGG | + | chr4.4:211412-211431 | MS.gene040107:CDS | 45.0% | |
| GCTGCTGCTATGTACAAAGT+CGG | + | chr4.4:209503-209522 | MS.gene040107:CDS | 45.0% | |
| GGATGCTAGGATCATTGAAG+AGG | + | chr4.4:208994-209013 | MS.gene040107:CDS | 45.0% | |
| GGTAAGTCTAGACATGGCAA+CGG | - | chr4.4:212210-212229 | None:intergenic | 45.0% | |
| GTAAGTCTAGACATGGCAAC+GGG | - | chr4.4:212209-212228 | None:intergenic | 45.0% | |
| GTACTCAAGAATGGCTGAGA+TGG | + | chr4.4:211019-211038 | MS.gene040107:CDS | 45.0% | |
| GTCTGATAGGACAATTCCAC+TGG | + | chr4.4:212502-212521 | MS.gene040107:intron | 45.0% | |
| GTTGGAGGCCATTATAACCT+GGG | + | chr4.4:209989-210008 | MS.gene040107:CDS | 45.0% | |
| TAAAAACCATTCCCGGGGAA+TGG | + | chr4.4:212986-213005 | MS.gene040107:intron | 45.0% | |
| TAAGTCTAGACATGGCAACG+GGG | - | chr4.4:212208-212227 | None:intergenic | 45.0% | |
| TAGTTGCAGAAAGAGGTCCA+TGG | + | chr4.4:210931-210950 | MS.gene040107:CDS | 45.0% | |
| TCCCGGGTATAAAATGTTCC+TGG | - | chr4.4:212856-212875 | None:intergenic | 45.0% | |
| TCCTAACTGTGCTGTATCTG+CGG | + | chr4.4:213372-213391 | MS.gene040107:CDS | 45.0% | |
| TCTTGAACCCAACACCAAGA+TGG | - | chr4.4:210132-210151 | None:intergenic | 45.0% | |
| TGGTGGGAATAAAGTTCCCA+TGG | - | chr4.4:212807-212826 | None:intergenic | 45.0% | |
| TTATTACCATTCCCCGGGAA+TGG | - | chr4.4:212995-213014 | None:intergenic | 45.0% | |
| TTCCCAAAAGATGCCTCCTA+GGG | - | chr4.4:210547-210566 | None:intergenic | 45.0% | |
| TTGGCTAGATGAAGGTCAAG+AGG | - | chr4.4:211466-211485 | None:intergenic | 45.0% | |
| TTTATTGTGGCTGCCAACCA+CGG | + | chr4.4:210070-210089 | MS.gene040107:CDS | 45.0% | |
| TTTCCCCGTTAAATTTGGGG+CGG | - | chr4.4:211724-211743 | None:intergenic | 45.0% | |
| ! | AAACCGATTTAACTGGGTGC+GGG | + | chr4.4:211743-211762 | MS.gene040107:intron | 45.0% |
| ! | AAAGGCTGCTGATAACGAAG+AGG | + | chr4.4:209967-209986 | MS.gene040107:CDS | 45.0% |
| ! | AAATAGAGTTTTCGCGGGTG+GGG | + | chr4.4:212055-212074 | MS.gene040107:intron | 45.0% |
| ! | ACTGGCTCTTACAAGCTTGT+GGG | + | chr4.4:211540-211559 | MS.gene040107:CDS | 45.0% |
| ! | AGTCGACTTAAAGGCAAGTC+AGG | - | chr4.4:213157-213176 | None:intergenic | 45.0% |
| ! | CGGGGAAAAACCGATTTAAC+TGG | + | chr4.4:211736-211755 | MS.gene040107:intron | 45.0% |
| ! | GAAGACAACTTGCTCTCTGT+AGG | + | chr4.4:210587-210606 | MS.gene040107:intron | 45.0% |
| ! | GATTTTTAATACGGAGGCGG+GGG | + | chr4.4:211781-211800 | MS.gene040107:intron | 45.0% |
| ! | GGATTTTTAATACGGAGGCG+GGG | + | chr4.4:211780-211799 | MS.gene040107:intron | 45.0% |
| ! | GGTTGAGAATGTGCTTTTGG+AGG | + | chr4.4:213313-213332 | MS.gene040107:CDS | 45.0% |
| ! | TCTGTAGGAGCATAGCTCTA+TGG | + | chr4.4:210602-210621 | MS.gene040107:intron | 45.0% |
| ! | TGTAGTTAAAGAGTGCACCG+TGG | - | chr4.4:211298-211317 | None:intergenic | 45.0% |
| ! | TTTGAGGCGTGACCATTCTA+AGG | + | chr4.4:209553-209572 | MS.gene040107:CDS | 45.0% |
| !! | ACCATGAGAGTGCCTTAGAA+TGG | - | chr4.4:209568-209587 | None:intergenic | 45.0% |
| !! | ACCATTCTAAGGCACTCTCA+TGG | + | chr4.4:209564-209583 | MS.gene040107:CDS | 45.0% |
| !! | GAGAATGTGCTTTTGGAGGA+GGG | + | chr4.4:213317-213336 | MS.gene040107:CDS | 45.0% |
| !! | TGAGAATGTGCTTTTGGAGG+AGG | + | chr4.4:213316-213335 | MS.gene040107:CDS | 45.0% |
| !! | TAAATAAAAATAATATTCAT+TGG | - | chr4.4:213105-213124 | None:intergenic | 5.0% |
| !!! | AATTTTTTAATAATAATCAA+AGG | + | chr4.4:212563-212582 | MS.gene040107:intron | 5.0% |
| !!! | ATTTTTTAATAATAATCAAA+GGG | + | chr4.4:212564-212583 | MS.gene040107:intron | 5.0% |
| ACACCCGCACCCAGTTAAAT+CGG | - | chr4.4:211749-211768 | None:intergenic | 50.0% | |
| AGAAAGCCTTTGGTTGACCG+TGG | - | chr4.4:210090-210109 | None:intergenic | 50.0% | |
| AGCAGCAGCATTCCCTTTCT+GGG | - | chr4.4:209492-209511 | None:intergenic | 50.0% | |
| AGCATGTGCATGGGTGAATC+TGG | + | chr4.4:211098-211117 | MS.gene040107:CDS | 50.0% | |
| AGCCTAACAGGTTCGATGAC+AGG | - | chr4.4:209383-209402 | None:intergenic | 50.0% | |
| AGCTAAGTTGCCAGTCACAC+TGG | + | chr4.4:211522-211541 | MS.gene040107:CDS | 50.0% | |
| AGCTGTTGTTGTAGCTGGAG+AGG | + | chr4.4:213412-213431 | MS.gene040107:CDS | 50.0% | |
| AGGATCATTGAAGAGGGCTC+CGG | + | chr4.4:209001-209020 | MS.gene040107:CDS | 50.0% | |
| AGGCAAGCTGTTGTTGTAGC+TGG | + | chr4.4:213407-213426 | MS.gene040107:CDS | 50.0% | |
| AGTTGCTGCCCACTACATTG+GGG | - | chr4.4:212380-212399 | None:intergenic | 50.0% | |
| ATCAGCGGGCACATTCTTTG+TGG | + | chr4.4:211144-211163 | MS.gene040107:CDS | 50.0% | |
| ATTTAACTGGGTGCGGGTGT+GGG | + | chr4.4:211749-211768 | MS.gene040107:intron | 50.0% | |
| CATCACTTTGCTTCAGAGGG+TGG | + | chr4.4:209136-209155 | MS.gene040107:CDS | 50.0% | |
| CCAAGAAGTTCCATAGAGCG+AGG | - | chr4.4:209617-209636 | None:intergenic | 50.0% | |
| CCATCCCCAAACCATATCAG+GGG | - | chr4.4:212141-212160 | None:intergenic | 50.0% | |
| CCCATCCCCAAACCATATCA+GGG | - | chr4.4:212142-212161 | None:intergenic | 50.0% | |
| CCTAACTGTGCTGTATCTGC+GGG | + | chr4.4:213373-213392 | MS.gene040107:CDS | 50.0% | |
| CCTCGCTCTATGGAACTTCT+TGG | + | chr4.4:209614-209633 | MS.gene040107:CDS | 50.0% | |
| CGGCTGCACAATCAGTGTTA+GGG | + | chr4.4:209056-209075 | MS.gene040107:CDS | 50.0% | |
| CTCCTGTCATCGAACCTGTT+AGG | + | chr4.4:209378-209397 | MS.gene040107:CDS | 50.0% | |
| CTTAAAAGGCGATGTCGGCA+AGG | + | chr4.4:210986-211005 | MS.gene040107:CDS | 50.0% | |
| CTTATGTCAGGGAACTGCCA+GGG | + | chr4.4:211339-211358 | MS.gene040107:intron | 50.0% | |
| CTTGAACCATTCACACCCCT+AGG | + | chr4.4:210528-210547 | MS.gene040107:intron | 50.0% | |
| CTTGGGTACATGCATGAGCA+TGG | + | chr4.4:211430-211449 | MS.gene040107:CDS | 50.0% | |
| CTTGTAAGAGCCAGTGTGAC+TGG | - | chr4.4:211535-211554 | None:intergenic | 50.0% | |
| GAAGGTCAAGAGGAAGTCCT+TGG | - | chr4.4:211456-211475 | None:intergenic | 50.0% | |
| GAGTTGCTGCCCACTACATT+GGG | - | chr4.4:212381-212400 | None:intergenic | 50.0% | |
| GCAGATACAGCACAGTTAGG+AGG | - | chr4.4:213373-213392 | None:intergenic | 50.0% | |
| GCAGGCACACCAAGTTCATT+AGG | - | chr4.4:213455-213474 | None:intergenic | 50.0% | |
| GCGTCTCAGTTACCTCAACA+TGG | + | chr4.4:211683-211702 | MS.gene040107:intron | 50.0% | |
| GCTCCATTGTGTAGCCTAAC+AGG | - | chr4.4:209395-209414 | None:intergenic | 50.0% | |
| GGAGAACGAAGCATGTGCAT+GGG | + | chr4.4:211089-211108 | MS.gene040107:CDS | 50.0% | |
| GGCACTCTCATGGTTCCTTA+AGG | + | chr4.4:209574-209593 | MS.gene040107:CDS | 50.0% | |
| GGTTGGAGGCCATTATAACC+TGG | + | chr4.4:209988-210007 | MS.gene040107:CDS | 50.0% | |
| TACATGCATGAGCATGGCCA+AGG | + | chr4.4:211436-211455 | MS.gene040107:CDS | 50.0% | |
| TAGCAGCAGCATTCCCTTTC+TGG | - | chr4.4:209493-209512 | None:intergenic | 50.0% | |
| TCCCAAAAGATGCCTCCTAG+GGG | - | chr4.4:210546-210565 | None:intergenic | 50.0% | |
| TCGAGTATCAGGCCCAGAAA+GGG | + | chr4.4:209477-209496 | MS.gene040107:CDS | 50.0% | |
| TCTTATGTCAGGGAACTGCC+AGG | + | chr4.4:211338-211357 | MS.gene040107:intron | 50.0% | |
| TGAGTTGCTGCCCACTACAT+TGG | - | chr4.4:212382-212401 | None:intergenic | 50.0% | |
| TGGAGAACGAAGCATGTGCA+TGG | + | chr4.4:211088-211107 | MS.gene040107:CDS | 50.0% | |
| TTCCTTAAGGCCGTCGACAA+AGG | + | chr4.4:209587-209606 | MS.gene040107:CDS | 50.0% | |
| ! | AATAGAGTTTTCGCGGGTGG+GGG | + | chr4.4:212056-212075 | MS.gene040107:intron | 50.0% |
| ! | ACTTTGGCCTTCGTGGTTTG+AGG | + | chr4.4:209537-209556 | MS.gene040107:CDS | 50.0% |
| ! | AGTTAGGAGGCACGCAAAGA+GGG | - | chr4.4:213360-213379 | None:intergenic | 50.0% |
| ! | CCCTGATATGGTTTGGGGAT+GGG | + | chr4.4:212139-212158 | MS.gene040107:intron | 50.0% |
| ! | CCTAACACTGATTGTGCAGC+CGG | - | chr4.4:209058-209077 | None:intergenic | 50.0% |
| ! | CCTGATATGGTTTGGGGATG+GGG | + | chr4.4:212140-212159 | MS.gene040107:intron | 50.0% |
| ! | CGGCTTTTGTTGCCATGTTG+AGG | - | chr4.4:211698-211717 | None:intergenic | 50.0% |
| ! | CTAACACTGATTGTGCAGCC+GGG | - | chr4.4:209057-209076 | None:intergenic | 50.0% |
| ! | CTGATATGGTTTGGGGATGG+GGG | + | chr4.4:212141-212160 | MS.gene040107:intron | 50.0% |
| ! | GCCGGGTATGTGATTGACTT+TGG | + | chr4.4:211231-211250 | MS.gene040107:intron | 50.0% |
| ! | GCTGATAACGAAGAGGTTGG+AGG | + | chr4.4:209974-209993 | MS.gene040107:CDS | 50.0% |
| ! | GCTGCTGATAACGAAGAGGT+TGG | + | chr4.4:209971-209990 | MS.gene040107:CDS | 50.0% |
| ! | GCTTGGAGCGTTTGTCTGAT+AGG | + | chr4.4:212489-212508 | MS.gene040107:intron | 50.0% |
| ! | TGCAGCTGTTTCAATCTCGC+CGG | - | chr4.4:209023-209042 | None:intergenic | 50.0% |
| ! | TTCCCCGTTAAATTTGGGGC+GGG | - | chr4.4:211723-211742 | None:intergenic | 50.0% |
| !! | AATGGCTGAGATGGGCTATG+AGG | + | chr4.4:211028-211047 | MS.gene040107:CDS | 50.0% |
| !! | CACTGGCTCTTACAAGCTTG+TGG | + | chr4.4:211539-211558 | MS.gene040107:CDS | 50.0% |
| !! | CTGATGCAGAAAGGCATCAG+CGG | + | chr4.4:211129-211148 | MS.gene040107:CDS | 50.0% |
| !! | TGATGCAGAAAGGCATCAGC+GGG | + | chr4.4:211130-211149 | MS.gene040107:CDS | 50.0% |
| !!! | ACCCCTAGGAGGCATCTTTT+GGG | + | chr4.4:210542-210561 | MS.gene040107:intron | 50.0% |
| AGCAGCTCGGTCATAATCCC+TGG | - | chr4.4:211359-211378 | None:intergenic | 55.0% | |
| AGCCTTTGGTTGACCGTGGT+TGG | - | chr4.4:210086-210105 | None:intergenic | 55.0% | |
| AGCGGGCACATTCTTTGTGG+TGG | + | chr4.4:211147-211166 | MS.gene040107:CDS | 55.0% | |
| AGCTGCAGAATCTGGTCACC+CGG | + | chr4.4:209036-209055 | MS.gene040107:CDS | 55.0% | |
| ATCTGCGGGAGAGGCAAAGA+AGG | + | chr4.4:213387-213406 | MS.gene040107:CDS | 55.0% | |
| CAAAGGAGAGCCTCGCTCTA+TGG | + | chr4.4:209604-209623 | MS.gene040107:CDS | 55.0% | |
| CCCCATCCCCAAACCATATC+AGG | - | chr4.4:212143-212162 | None:intergenic | 55.0% | |
| CCCGCAGATACAGCACAGTT+AGG | - | chr4.4:213376-213395 | None:intergenic | 55.0% | |
| CCGGCTGCACAATCAGTGTT+AGG | + | chr4.4:209055-209074 | MS.gene040107:CDS | 55.0% | |
| CTCCTTTGTCGACGGCCTTA+AGG | - | chr4.4:209592-209611 | None:intergenic | 55.0% | |
| CTCGAGTATCAGGCCCAGAA+AGG | + | chr4.4:209476-209495 | MS.gene040107:CDS | 55.0% | |
| GAACCATTCACACCCCTAGG+AGG | + | chr4.4:210531-210550 | MS.gene040107:intron | 55.0% | |
| GAGATATATGCCAGGGGAGC+AGG | + | chr4.4:209638-209657 | MS.gene040107:CDS | 55.0% | |
| GATTTAACTGGGTGCGGGTG+TGG | + | chr4.4:211748-211767 | MS.gene040107:intron | 55.0% | |
| GCATGTAAGCCTCAGCAGCT+CGG | - | chr4.4:211372-211391 | None:intergenic | 55.0% | |
| GCGAGCTGGTAGAAAGCCTT+TGG | - | chr4.4:210100-210119 | None:intergenic | 55.0% | |
| GGATTATGACCGAGCTGCTG+AGG | + | chr4.4:211360-211379 | MS.gene040107:CDS | 55.0% | |
| GTGACTGGCAACTTAGCTGC+AGG | - | chr4.4:211520-211539 | None:intergenic | 55.0% | |
| TGCCAACCACGGTCAACCAA+AGG | + | chr4.4:210081-210100 | MS.gene040107:CDS | 55.0% | |
| TGGCACAGAGCAATGCTGCT+TGG | + | chr4.4:211051-211070 | MS.gene040107:CDS | 55.0% | |
| TGGTGGCAAGCTTCTGAGCA+GGG | + | chr4.4:211164-211183 | MS.gene040107:CDS | 55.0% | |
| TTTAAAAAGCGGGTGCGGGG+CGG | - | chr4.4:211834-211853 | None:intergenic | 55.0% | |
| TTTAACTGGGTGCGGGTGTG+GGG | + | chr4.4:211750-211769 | MS.gene040107:intron | 55.0% | |
| ! | ATGCCTCCTAGGGGTGTGAA+TGG | - | chr4.4:210537-210556 | None:intergenic | 55.0% |
| ! | CAGTTAGGAGGCACGCAAAG+AGG | - | chr4.4:213361-213380 | None:intergenic | 55.0% |
| ! | CCCCTGATATGGTTTGGGGA+TGG | + | chr4.4:212138-212157 | MS.gene040107:intron | 55.0% |
| ! | TCCCCGTTAAATTTGGGGCG+GGG | - | chr4.4:211722-211741 | None:intergenic | 55.0% |
| !! | GTATGCTTCTAGGGCCCATC+TGG | - | chr4.4:210967-210986 | None:intergenic | 55.0% |
| !!! | CACCCCTAGGAGGCATCTTT+TGG | + | chr4.4:210541-210560 | MS.gene040107:intron | 55.0% |
| ACATGGCAACGGGGCAGATC+GGG | - | chr4.4:212199-212218 | None:intergenic | 60.0% | |
| CCCCCGCCCCAAATTTAACG+GGG | + | chr4.4:211718-211737 | MS.gene040107:intron | 60.0% | |
| CGCCCCCGCCCCAAATTTAA+CGG | + | chr4.4:211716-211735 | MS.gene040107:intron | 60.0% | |
| CTGTGCTGTATCTGCGGGAG+AGG | + | chr4.4:213378-213397 | MS.gene040107:CDS | 60.0% | |
| GACATGGCAACGGGGCAGAT+CGG | - | chr4.4:212200-212219 | None:intergenic | 60.0% | |
| GCCCCCGCCCCAAATTTAAC+GGG | + | chr4.4:211717-211736 | MS.gene040107:intron | 60.0% | |
| GCGAGGCTCTCCTTTGTCGA+CGG | - | chr4.4:209600-209619 | None:intergenic | 60.0% | |
| GGTCACGCCTCAAACCACGA+AGG | - | chr4.4:209547-209566 | None:intergenic | 60.0% | |
| GTGCGGGTGTGGGGGAAATT+TGG | + | chr4.4:211759-211778 | MS.gene040107:intron | 60.0% | |
| GTGGTGGCAAGCTTCTGAGC+AGG | + | chr4.4:211163-211182 | MS.gene040107:CDS | 60.0% | |
| TCTCTCAACACCTGCTCCCC+TGG | - | chr4.4:209651-209670 | None:intergenic | 60.0% | |
| TTAAAAAGCGGGTGCGGGGC+GGG | - | chr4.4:211833-211852 | None:intergenic | 60.0% | |
| TTAACTGGGTGCGGGTGTGG+GGG | + | chr4.4:211751-211770 | MS.gene040107:intron | 60.0% | |
| ! | ATGGTTTGGGGATGGGGGCA+GGG | + | chr4.4:212146-212165 | MS.gene040107:intron | 60.0% |
| ! | CCCCGTTAAATTTGGGGCGG+GGG | - | chr4.4:211721-211740 | None:intergenic | 60.0% |
| ! | CGTTAAATTTGGGGCGGGGG+CGG | - | chr4.4:211718-211737 | None:intergenic | 60.0% |
| ! | TATGGTTTGGGGATGGGGGC+AGG | + | chr4.4:212145-212164 | MS.gene040107:intron | 60.0% |
| !! | GGCTGAGATGGGCTATGAGG+TGG | + | chr4.4:211031-211050 | MS.gene040107:CDS | 60.0% |
| ATGGCAACGGGGCAGATCGG+GGG | - | chr4.4:212197-212216 | None:intergenic | 65.0% | |
| CATGGCAACGGGGCAGATCG+GGG | - | chr4.4:212198-212217 | None:intergenic | 65.0% | |
| TAAAAAGCGGGTGCGGGGCG+GGG | - | chr4.4:211832-211851 | None:intergenic | 65.0% | |
| ! | AGAGTTTTCGCGGGTGGGGG+CGG | + | chr4.4:212059-212078 | MS.gene040107:intron | 65.0% |
| ! | TGGTTTGGGGATGGGGGCAG+GGG | + | chr4.4:212147-212166 | MS.gene040107:intron | 65.0% |
| AAAAAGCGGGTGCGGGGCGG+GGG | - | chr4.4:211831-211850 | None:intergenic | 70.0% | |
| AACCCCGCCCCCAATGGGGA+CGG | - | chr4.4:212102-212121 | None:intergenic | 70.0% | |
| ACACCCAACCCCGCCCCCAA+TGG | - | chr4.4:212108-212127 | None:intergenic | 70.0% | |
| ACCCAACCCCGCCCCCAATG+GGG | - | chr4.4:212106-212125 | None:intergenic | 70.0% | |
| AGACCCGTCCCCATTGGGGG+CGG | + | chr4.4:212095-212114 | MS.gene040107:intron | 70.0% | |
| CACCCAACCCCGCCCCCAAT+GGG | - | chr4.4:212107-212126 | None:intergenic | 70.0% | |
| CCCAATGGGGACGGGTCTCC+CGG | - | chr4.4:212093-212112 | None:intergenic | 70.0% | |
| CCGGGAGACCCGTCCCCATT+GGG | + | chr4.4:212090-212109 | MS.gene040107:intron | 70.0% | |
| CGGGAGACCCGTCCCCATTG+GGG | + | chr4.4:212091-212110 | MS.gene040107:intron | 70.0% | |
| GGGAGACCCGTCCCCATTGG+GGG | + | chr4.4:212092-212111 | MS.gene040107:intron | 70.0% | |
| TCCCCATTGGGGGCGGGGTT+GGG | + | chr4.4:212102-212121 | MS.gene040107:intron | 70.0% | |
| TTTGGGGATGGGGGCAGGGG+CGG | + | chr4.4:212150-212169 | MS.gene040107:intron | 70.0% | |
| ! | AGTTTTCGCGGGTGGGGGCG+GGG | + | chr4.4:212061-212080 | MS.gene040107:intron | 70.0% |
| ! | GAGTTTTCGCGGGTGGGGGC+GGG | + | chr4.4:212060-212079 | MS.gene040107:intron | 70.0% |
| ACCCCGCCCCCAATGGGGAC+GGG | - | chr4.4:212101-212120 | None:intergenic | 75.0% | |
| ACCCGTCCCCATTGGGGGCG+GGG | + | chr4.4:212097-212116 | MS.gene040107:intron | 75.0% | |
| CAACGGGGCAGATCGGGGGC+GGG | - | chr4.4:212193-212212 | None:intergenic | 75.0% | |
| GACCCGTCCCCATTGGGGGC+GGG | + | chr4.4:212096-212115 | MS.gene040107:intron | 75.0% | |
| GCAACGGGGCAGATCGGGGG+CGG | - | chr4.4:212194-212213 | None:intergenic | 75.0% | |
| GCCGGGAGACCCGTCCCCAT+TGG | + | chr4.4:212089-212108 | MS.gene040107:intron | 75.0% | |
| GTCCCCATTGGGGGCGGGGT+TGG | + | chr4.4:212101-212120 | MS.gene040107:intron | 75.0% | |
| TTGGGGATGGGGGCAGGGGC+GGG | + | chr4.4:212151-212170 | MS.gene040107:intron | 75.0% | |
| ! | GTTTTCGCGGGTGGGGGCGG+GGG | + | chr4.4:212062-212081 | MS.gene040107:intron | 75.0% |
| ! | ATGGGGGCAGGGGCGGGGAC+GGG | + | chr4.4:212157-212176 | MS.gene040107:intron | 80.0% |
| ! | GATGGGGGCAGGGGCGGGGA+CGG | + | chr4.4:212156-212175 | MS.gene040107:intron | 80.0% |
| ! | TGGGGATGGGGGCAGGGGCG+GGG | + | chr4.4:212152-212171 | MS.gene040107:intron | 80.0% |
| ! | AAGCGGGTGCGGGGCGGGGG+TGG | - | chr4.4:211828-211847 | None:intergenic | 85.0% |
| ! | AGCGGGTGCGGGGCGGGGGT+GGG | - | chr4.4:211827-211846 | None:intergenic | 85.0% |
| ! | GCGGGGCGGGGGTGGGTGCA+GGG | - | chr4.4:211820-211839 | None:intergenic | 85.0% |
| ! | GGGCGGGGGTGGGTGCAGGG+CGG | - | chr4.4:211817-211836 | None:intergenic | 85.0% |
| ! | TGCGGGGCGGGGGTGGGTGC+AGG | - | chr4.4:211821-211840 | None:intergenic | 85.0% |
| ! | TGGGGGCAGGGGCGGGGACG+GGG | + | chr4.4:212158-212177 | MS.gene040107:intron | 85.0% |
| ! | TTCGCGGGTGGGGGCGGGGG+CGG | + | chr4.4:212065-212084 | MS.gene040107:intron | 85.0% |
| ! | TCGCGGGTGGGGGCGGGGGC+GGG | + | chr4.4:212066-212085 | MS.gene040107:intron | 90.0% |
| ! | CGCGGGTGGGGGCGGGGGCG+GGG | + | chr4.4:212067-212086 | MS.gene040107:intron | 95.0% |
| ! | GGTGGGGGCGGGGGCGGGGC+CGG | + | chr4.4:212071-212090 | MS.gene040107:intron | 95.0% |
| ! | GTGGGGGCGGGGGCGGGGCC+GGG | + | chr4.4:212072-212091 | MS.gene040107:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 208986 | 213484 | 208986 | ID=MS.gene040107 |
| chr4.4 | mRNA | 208986 | 213484 | 208986 | ID=MS.gene040107.t1;Parent=MS.gene040107 |
| chr4.4 | exon | 208986 | 209207 | 208986 | ID=MS.gene040107.t1.exon1;Parent=MS.gene040107.t1 |
| chr4.4 | CDS | 208986 | 209207 | 208986 | ID=cds.MS.gene040107.t1;Parent=MS.gene040107.t1 |
| chr4.4 | exon | 209302 | 209793 | 209302 | ID=MS.gene040107.t1.exon2;Parent=MS.gene040107.t1 |
| chr4.4 | CDS | 209302 | 209793 | 209302 | ID=cds.MS.gene040107.t1;Parent=MS.gene040107.t1 |
| chr4.4 | exon | 209950 | 210165 | 209950 | ID=MS.gene040107.t1.exon3;Parent=MS.gene040107.t1 |
| chr4.4 | CDS | 209950 | 210165 | 209950 | ID=cds.MS.gene040107.t1;Parent=MS.gene040107.t1 |
| chr4.4 | exon | 210912 | 211235 | 210912 | ID=MS.gene040107.t1.exon4;Parent=MS.gene040107.t1 |
| chr4.4 | CDS | 210912 | 211235 | 210912 | ID=cds.MS.gene040107.t1;Parent=MS.gene040107.t1 |
| chr4.4 | exon | 211349 | 211591 | 211349 | ID=MS.gene040107.t1.exon5;Parent=MS.gene040107.t1 |
| chr4.4 | CDS | 211349 | 211591 | 211349 | ID=cds.MS.gene040107.t1;Parent=MS.gene040107.t1 |
| chr4.4 | exon | 213263 | 213484 | 213263 | ID=MS.gene040107.t1.exon6;Parent=MS.gene040107.t1 |
| chr4.4 | CDS | 213263 | 213484 | 213263 | ID=cds.MS.gene040107.t1;Parent=MS.gene040107.t1 |
| Gene Sequence |
| Protein sequence |
