Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030876.t1 | XP_013446717.1 | 97.4 | 661 | 17 | 0 | 1 | 661 | 1 | 661 | 0.00E+00 | 1090.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030876.t1 | A0A072TT98 | 97.4 | 661 | 17 | 0 | 1 | 661 | 1 | 661 | 0.0e+00 | 1090.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030876 | MS.gene75708 | PPI |
| MS.gene030876 | MS.gene77496 | PPI |
| MS.gene030876 | MS.gene79861 | PPI |
| MS.gene93746 | MS.gene030876 | PPI |
| MS.gene030876 | MS.gene047008 | PPI |
| MS.gene045393 | MS.gene030876 | PPI |
| MS.gene030876 | MS.gene040107 | PPI |
| MS.gene030876 | MS.gene047041 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030876.t1 | MTR_8g089685 | 97.731 | 661 | 15 | 0 | 1 | 661 | 1 | 661 | 0.0 | 1294 |
| MS.gene030876.t1 | MTR_8g089685 | 97.243 | 544 | 15 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1052 |
| MS.gene030876.t1 | MTR_8g089685 | 96.603 | 471 | 16 | 0 | 1 | 471 | 1 | 471 | 0.0 | 907 |
| MS.gene030876.t1 | MTR_1g100880 | 36.039 | 308 | 181 | 4 | 334 | 630 | 125 | 427 | 2.38e-38 | 148 |
| MS.gene030876.t1 | MTR_5g045350 | 57.426 | 101 | 12 | 3 | 474 | 558 | 34 | 119 | 1.43e-21 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030876.t1 | AT1G24560 | 56.241 | 681 | 271 | 10 | 4 | 661 | 2 | 678 | 0.0 | 667 |
| MS.gene030876.t1 | AT3G49055 | 30.548 | 383 | 230 | 9 | 262 | 631 | 94 | 453 | 1.62e-22 | 102 |
Find 157 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAGGTTTCTGAGAGTTTA+AGG | 0.165822 | 4.3:-10845596 | MS.gene030876:CDS |
| ACTGGAATTGAGAAGATTTC+TGG | 0.197534 | 4.3:-10845930 | MS.gene030876:CDS |
| GAAGGAGTTTGTTAATAATT+TGG | 0.197675 | 4.3:-10845547 | MS.gene030876:CDS |
| TTCAAATTTAGTAAGATTCT+TGG | 0.227068 | 4.3:-10845105 | MS.gene030876:CDS |
| CATTCTATGGTCGAGTTCTT+TGG | 0.227216 | 4.3:+10844603 | None:intergenic |
| TCTGGTAAGGTGAATGGTTT+TGG | 0.265573 | 4.3:-10845912 | MS.gene030876:CDS |
| GACTTCATTCAACCGATTAA+AGG | 0.284071 | 4.3:-10846132 | MS.gene030876:CDS |
| AACTGCAGCCGTTGAGGGTT+TGG | 0.288903 | 4.3:-10845652 | MS.gene030876:CDS |
| CATTGATGATGCTGGTTATT+CGG | 0.297833 | 4.3:-10845433 | MS.gene030876:CDS |
| CCTCCACCCGGTGCATTCTA+TGG | 0.302232 | 4.3:+10844590 | None:intergenic |
| GGAGAGGGATTTGGTTGTTA+AGG | 0.312356 | 4.3:-10845631 | MS.gene030876:CDS |
| CACTGTGCAGGCTGGTGCTT+TGG | 0.313975 | 4.3:-10844904 | MS.gene030876:intron |
| AGATTTCTCTGCTGCATCTC+TGG | 0.331404 | 4.3:+10842309 | None:intergenic |
| AAGACTTGAGGGGCCGAAAT+AGG | 0.339224 | 4.3:-10842201 | MS.gene030876:CDS |
| GAGTGAGGGTTTGCAGTTGA+AGG | 0.339449 | 4.3:-10845565 | MS.gene030876:CDS |
| TGCTGCATCTCTGGCTGCCA+TGG | 0.341080 | 4.3:+10842318 | None:intergenic |
| GAATTTGATGTGATCGGAAT+TGG | 0.344001 | 4.3:+10846263 | None:intergenic |
| TGAAGTCTGTAACTCCGTTT+TGG | 0.347141 | 4.3:+10846148 | None:intergenic |
| AATGTACGCGCCTCTTTGGC+TGG | 0.351712 | 4.3:-10845363 | MS.gene030876:CDS |
| GTTAAGGAAAAGGATCAAAT+TGG | 0.357356 | 4.3:-10845231 | MS.gene030876:CDS |
| TGAGGGTTTGGAGAGGGATT+TGG | 0.360266 | 4.3:-10845640 | MS.gene030876:CDS |
| TCGAGTCATATGATGGTTAC+TGG | 0.361394 | 4.3:-10845948 | MS.gene030876:CDS |
| CTTGAGCAAGCACCTTTAAT+CGG | 0.365333 | 4.3:+10846120 | None:intergenic |
| TCACAGTCTCATCTAAATTC+TGG | 0.366217 | 4.3:+10845262 | None:intergenic |
| GGTTGCGTGATGATGCTGTT+AGG | 0.370427 | 4.3:-10846067 | MS.gene030876:CDS |
| TATGGTCGAGTTCTTTGGCC+TGG | 0.370910 | 4.3:+10844608 | None:intergenic |
| ATACATATCTAGGCCTATTT+CGG | 0.371352 | 4.3:+10842188 | None:intergenic |
| CAAGAAGCTGCTGCAGGCAC+AGG | 0.383789 | 4.3:-10844279 | MS.gene030876:CDS |
| TGAGAATGTACGCGCCTCTT+TGG | 0.389318 | 4.3:-10845367 | MS.gene030876:CDS |
| AGCACACTGTGAATGAATTA+AGG | 0.395713 | 4.3:-10844839 | MS.gene030876:intron |
| TAATAATTTGGAATCAAAGA+TGG | 0.396116 | 4.3:-10845535 | MS.gene030876:CDS |
| ATCAAATTGGTTCTTTGCTT+AGG | 0.398406 | 4.3:-10845218 | MS.gene030876:CDS |
| GGTATGGCTGCGGTGACTTA+TGG | 0.401013 | 4.3:-10845849 | MS.gene030876:CDS |
| ATACGGAAGCGCGATGAATT+CGG | 0.405883 | 4.3:-10846092 | MS.gene030876:CDS |
| CATGGCCAGCATACATATCT+AGG | 0.407682 | 4.3:+10842178 | None:intergenic |
| GAATTATGAGATTGCTATTG+AGG | 0.413784 | 4.3:-10845727 | MS.gene030876:CDS |
| AGAAACTGCGAGGCAATTAG+AGG | 0.421139 | 4.3:-10846015 | MS.gene030876:CDS |
| AAGATTTCTGGTAAGGTGAA+TGG | 0.421879 | 4.3:-10845918 | MS.gene030876:CDS |
| TGGCTCGGCATGGACTTTGT+TGG | 0.426457 | 4.3:-10842151 | MS.gene030876:CDS |
| ATGCTATTCAATTAAATGTC+CGG | 0.428651 | 4.3:-10846344 | None:intergenic |
| GCTTTCTGAGTCGTTGTTTG+TGG | 0.428931 | 4.3:-10845409 | MS.gene030876:CDS |
| TCTTATAAACACTACAAATC+TGG | 0.432821 | 4.3:+10845457 | None:intergenic |
| TGCTTTGGAGGATGTTGTTA+AGG | 0.434993 | 4.3:-10844889 | MS.gene030876:CDS |
| GACTGTGAATAGGTTAGTTA+AGG | 0.436099 | 4.3:-10845247 | MS.gene030876:CDS |
| TGTGCAGGCTGGTGCTTTGG+AGG | 0.442489 | 4.3:-10844901 | MS.gene030876:intron |
| TTTAAGGAAGGAAGAGAGTG+AGG | 0.442980 | 4.3:-10845580 | MS.gene030876:CDS |
| GAAAATGGGTTGAGGGAGGT+TGG | 0.445747 | 4.3:-10845135 | MS.gene030876:CDS |
| GTTGTTTGTGGCGCAAGAAA+CGG | 0.448855 | 4.3:-10845397 | MS.gene030876:CDS |
| TGAGAACAGAGAAGACTTGA+GGG | 0.449088 | 4.3:-10842212 | MS.gene030876:CDS |
| ATGGTCGAGTTCTTTGGCCT+GGG | 0.450706 | 4.3:+10844609 | None:intergenic |
| TGCGAGGCAATTAGAGGAAT+CGG | 0.452953 | 4.3:-10846009 | MS.gene030876:CDS |
| CTCTTTATAATGCAGATTGA+GGG | 0.453284 | 4.3:-10844363 | MS.gene030876:intron |
| AAAAGTTAGGGATTTGGTTG+AGG | 0.457748 | 4.3:-10845301 | MS.gene030876:CDS |
| TAACAGCATCATCACGCAAC+CGG | 0.459925 | 4.3:+10846069 | None:intergenic |
| GACTGATACGCAACAGCAAA+CGG | 0.460239 | 4.3:-10842116 | MS.gene030876:CDS |
| ACAGAATGATGCAAGTGTTA+AGG | 0.465407 | 4.3:-10845784 | MS.gene030876:CDS |
| CACATCAAATTCACCTTCAC+AGG | 0.466563 | 4.3:-10846252 | MS.gene030876:CDS |
| TTTAGTAAGATTCTTGGAGA+TGG | 0.466672 | 4.3:-10845099 | MS.gene030876:CDS |
| TTCCAATTATAAGAGAGGTT+CGG | 0.467159 | 4.3:+10842072 | None:intergenic |
| GCAAACGGCTTCTAACGAAA+TGG | 0.471284 | 4.3:-10842101 | MS.gene030876:CDS |
| TGCTATTGAGGTTTCGCAGT+TGG | 0.472675 | 4.3:-10845715 | MS.gene030876:CDS |
| AGCGGCAGAAAATGGGTTGA+GGG | 0.474191 | 4.3:-10845142 | MS.gene030876:CDS |
| GGCATCTAAGTCGCCGGCGC+CGG | 0.475732 | 4.3:+10846325 | None:intergenic |
| GCAGAGCAAGAAGCTGCTGC+AGG | 0.479033 | 4.3:-10844285 | MS.gene030876:CDS |
| TTCAATTAAATGTCCGGCGC+CGG | 0.481437 | 4.3:-10846338 | None:intergenic |
| GATTCTCGCCGAGCTTGATC+AGG | 0.482851 | 4.3:-10846201 | MS.gene030876:CDS |
| CGGCGACTTAGATGCCGATT+CGG | 0.483746 | 4.3:-10846318 | MS.gene030876:CDS |
| ATTTAGATGAGACTGTGAAT+AGG | 0.488303 | 4.3:-10845257 | MS.gene030876:CDS |
| TTAAGGAAGGAAGAGAGTGA+GGG | 0.489133 | 4.3:-10845579 | MS.gene030876:CDS |
| CGCCGCCGAGAAAGCCAAAA+CGG | 0.489160 | 4.3:-10846162 | MS.gene030876:CDS |
| AAGAAAACTGCAGCCGTTGA+GGG | 0.489646 | 4.3:-10845657 | MS.gene030876:CDS |
| GAATTCATCGCGCTTCCGTA+TGG | 0.491635 | 4.3:+10846094 | None:intergenic |
| AGAGACAGCAGCTGCTGCCA+TGG | 0.494691 | 4.3:-10842335 | MS.gene030876:CDS |
| CAACTCATTTGAAGACGGAT+TGG | 0.497391 | 4.3:+10845170 | None:intergenic |
| TGCTGGCCATGGCAGTGGCT+CGG | 0.499416 | 4.3:-10842166 | MS.gene030876:CDS |
| TTAAGGCTAGGGATCAAGCT+AGG | 0.500217 | 4.3:-10845767 | MS.gene030876:CDS |
| GCCATGGCAGTGGCTCGGCA+TGG | 0.506711 | 4.3:-10842161 | MS.gene030876:CDS |
| ACTTGAGGTCTTCTAGACTA+AGG | 0.506773 | 4.3:-10842273 | MS.gene030876:CDS |
| TATAAGATCATTGATGATGC+TGG | 0.507256 | 4.3:-10845441 | MS.gene030876:CDS |
| ACGCGCCTCTTTGGCTGGGA+TGG | 0.508680 | 4.3:-10845358 | MS.gene030876:CDS |
| AATTGAGAAGATTTCTGGTA+AGG | 0.512747 | 4.3:-10845925 | MS.gene030876:CDS |
| GGTTTCTGAGAGTTTAAGGA+AGG | 0.515527 | 4.3:-10845592 | MS.gene030876:CDS |
| TGAACAGCAATTTGTGGCAC+AGG | 0.518504 | 4.3:-10844253 | MS.gene030876:intron |
| GAATAGGTTAGTTAAGGAAA+AGG | 0.519027 | 4.3:-10845241 | MS.gene030876:CDS |
| GCAGATTGAGGGGCTAATGA+TGG | 0.523203 | 4.3:-10844352 | MS.gene030876:intron |
| ATGTACGCGCCTCTTTGGCT+GGG | 0.523765 | 4.3:-10845362 | MS.gene030876:CDS |
| AGAGGATGAAATATACACTT+TGG | 0.525090 | 4.3:-10845028 | MS.gene030876:intron |
| TAGCGGCAGAAAATGGGTTG+AGG | 0.529571 | 4.3:-10845143 | MS.gene030876:CDS |
| AAAATTTCCAATTATAAGAG+AGG | 0.530012 | 4.3:+10842067 | None:intergenic |
| AGCCGTTGAGGGTTTGGAGA+GGG | 0.534744 | 4.3:-10845646 | MS.gene030876:CDS |
| GTTGCGTGATGATGCTGTTA+GGG | 0.539375 | 4.3:-10846066 | MS.gene030876:CDS |
| TCTCTTCAAGTTCCTCCACC+CGG | 0.540700 | 4.3:+10844578 | None:intergenic |
| CCATAGAATGCACCGGGTGG+AGG | 0.541339 | 4.3:-10844590 | MS.gene030876:CDS |
| ATCCCTCTCCAAACCCTCAA+CGG | 0.544511 | 4.3:+10845644 | None:intergenic |
| GAAATATACCGGTATGGCTG+CGG | 0.544973 | 4.3:-10845859 | MS.gene030876:CDS |
| GAAGAAAACTGCAGCCGTTG+AGG | 0.546363 | 4.3:-10845658 | MS.gene030876:CDS |
| GAGTGCTTTGTCAAAGAGGA+TGG | 0.550359 | 4.3:-10845196 | MS.gene030876:CDS |
| AGGTGTTGAACAGCAATTTG+TGG | 0.550763 | 4.3:-10844259 | MS.gene030876:CDS |
| ATGATGCAAGTGTTAAGGCT+AGG | 0.551573 | 4.3:-10845779 | MS.gene030876:CDS |
| TGATGCAAGTGTTAAGGCTA+GGG | 0.553468 | 4.3:-10845778 | MS.gene030876:CDS |
| TAAGGATGAGAAGTTGAATG+AGG | 0.556456 | 4.3:-10845613 | MS.gene030876:CDS |
| GACGTCGCTGAGCACCGAAT+CGG | 0.557895 | 4.3:+10846304 | None:intergenic |
| GCAGTTGTCAACGCTCAAGC+AGG | 0.558280 | 4.3:-10842416 | MS.gene030876:intron |
| TTAGGAGTGCTTTGTCAAAG+AGG | 0.560450 | 4.3:-10845200 | MS.gene030876:CDS |
| TTGAGAACAGAGAAGACTTG+AGG | 0.560542 | 4.3:-10842213 | MS.gene030876:CDS |
| TGCTGTTAGGGAGAAGGAAG+AGG | 0.562775 | 4.3:-10846054 | MS.gene030876:CDS |
| CTTGAGGTCTTCTAGACTAA+GGG | 0.563951 | 4.3:-10842272 | MS.gene030876:CDS |
| CTAGATATGTATGCTGGCCA+TGG | 0.566839 | 4.3:-10842177 | MS.gene030876:CDS |
| GTCGCAGAAATATACCGGTA+TGG | 0.569668 | 4.3:-10845865 | MS.gene030876:CDS |
| TGAGAAATCGAGTCATATGA+TGG | 0.570001 | 4.3:-10845955 | MS.gene030876:CDS |
| TAAGCAGCACATAGAAGCCC+AGG | 0.570404 | 4.3:-10844626 | MS.gene030876:CDS |
| ATGTATGCTGGCCATGGCAG+TGG | 0.573801 | 4.3:-10842171 | MS.gene030876:CDS |
| CCGGTATATTTCTGCGACCG+CGG | 0.574878 | 4.3:+10845870 | None:intergenic |
| AACTCGACCATAGAATGCAC+CGG | 0.575532 | 4.3:-10844597 | MS.gene030876:CDS |
| TGCTTGCTCAAGAAGCCATA+CGG | 0.576060 | 4.3:-10846109 | MS.gene030876:CDS |
| CGAATCGGCATCTAAGTCGC+CGG | 0.577434 | 4.3:+10846319 | None:intergenic |
| TGATGTGATCGGAATTGGAT+CGG | 0.580529 | 4.3:+10846268 | None:intergenic |
| CTGAAGAAGAAATTAACAGA+TGG | 0.583950 | 4.3:-10844317 | MS.gene030876:CDS |
| TATTAGTGATTTGAGAGATG+AGG | 0.584521 | 4.3:-10845685 | MS.gene030876:CDS |
| CAAGCTCGGCGAGAATCTCA+CGG | 0.585055 | 4.3:+10846207 | None:intergenic |
| ATAGGCCTAGATATGTATGC+TGG | 0.587227 | 4.3:-10842183 | MS.gene030876:CDS |
| ATAAGTCACCGCAGCCATAC+CGG | 0.588731 | 4.3:+10845851 | None:intergenic |
| TAGAGGAATCGGCGAAGGAG+CGG | 0.590365 | 4.3:-10845998 | MS.gene030876:CDS |
| CCGCGGTCGCAGAAATATAC+CGG | 0.590801 | 4.3:-10845870 | MS.gene030876:CDS |
| CTCTCAAGTTAGCAGACTTG+AGG | 0.593940 | 4.3:-10842288 | MS.gene030876:CDS |
| AATCTATACATGAGTTGACT+AGG | 0.596241 | 4.3:-10845335 | MS.gene030876:CDS |
| GGTGGAGGAACTTGAAGAGA+AGG | 0.596408 | 4.3:-10844575 | MS.gene030876:CDS |
| GCAATTAGAGGAATCGGCGA+AGG | 0.598822 | 4.3:-10846003 | MS.gene030876:CDS |
| TCCATGCCGAGCCACTGCCA+TGG | 0.602713 | 4.3:+10842160 | None:intergenic |
| AGAGGCAAAGCAATCCATGT+TGG | 0.607377 | 4.3:-10842386 | MS.gene030876:CDS |
| ACTTGAAGAGAAGGAAAGAG+TGG | 0.609943 | 4.3:-10844566 | MS.gene030876:CDS |
| TTCAACTGATCAATCAACAA+AGG | 0.612891 | 4.3:+10845501 | None:intergenic |
| TCTTTATAATGCAGATTGAG+GGG | 0.613990 | 4.3:-10844362 | MS.gene030876:intron |
| GGAGCGGCAAGGATTACGAT+CGG | 0.614644 | 4.3:-10845982 | MS.gene030876:CDS |
| GCTCAAGCAGGAACTTGAAG+AGG | 0.618199 | 4.3:-10842404 | MS.gene030876:CDS |
| CTCAGCGACGTCGAGGACGA+CGG | 0.618536 | 4.3:-10846293 | MS.gene030876:CDS |
| TTCGGTGCTCAGCGACGTCG+AGG | 0.625351 | 4.3:-10846300 | MS.gene030876:CDS |
| GAAGGTGAATTTGATGTGAT+CGG | 0.630779 | 4.3:+10846257 | None:intergenic |
| ACGGAGACTTCATCCTGTGA+AGG | 0.633111 | 4.3:+10846239 | None:intergenic |
| TAAGGCTAGGGATCAAGCTA+GGG | 0.634167 | 4.3:-10845766 | MS.gene030876:CDS |
| TGATGATGCTGTTAGGGAGA+AGG | 0.635078 | 4.3:-10846060 | MS.gene030876:CDS |
| AGATTCCATCCCAGCCAAAG+AGG | 0.642943 | 4.3:+10845353 | None:intergenic |
| CAGCCGTTGAGGGTTTGGAG+AGG | 0.644245 | 4.3:-10845647 | MS.gene030876:CDS |
| TTTCTTCTCAGATTCCAACA+TGG | 0.645960 | 4.3:+10842372 | None:intergenic |
| GGAAGCGCGATGAATTCGGC+CGG | 0.645981 | 4.3:-10846088 | MS.gene030876:CDS |
| GAATCGGCGAAGGAGCGGCA+AGG | 0.647315 | 4.3:-10845993 | MS.gene030876:CDS |
| GAAGTGGAAGCGCTTTGCCG+CGG | 0.652202 | 4.3:-10845887 | MS.gene030876:CDS |
| GGCAGAAAATGGGTTGAGGG+AGG | 0.653218 | 4.3:-10845139 | MS.gene030876:CDS |
| ACTCGACCATAGAATGCACC+GGG | 0.661588 | 4.3:-10844596 | MS.gene030876:CDS |
| TTCTAGACTAAGGGACAGAG+TGG | 0.663047 | 4.3:-10842263 | MS.gene030876:CDS |
| GAGAACAGAGAAGACTTGAG+GGG | 0.677822 | 4.3:-10842211 | MS.gene030876:CDS |
| GGGGCTAATGATGGACATTG+CGG | 0.692078 | 4.3:-10844343 | MS.gene030876:CDS |
| CGACCATAGAATGCACCGGG+TGG | 0.695799 | 4.3:-10844593 | MS.gene030876:CDS |
| AATCAAAGATGGAATCGTTG+AGG | 0.695950 | 4.3:-10845524 | MS.gene030876:CDS |
| AGCTTCTAGAAGAAACTGCG+AGG | 0.719282 | 4.3:-10846025 | MS.gene030876:CDS |
| CTAGGGAACAGATTGAACAG+AGG | 0.728016 | 4.3:-10845749 | MS.gene030876:CDS |
| ACTTTGTTGGAATTCAGCAG+CGG | 0.730616 | 4.3:-10842138 | MS.gene030876:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGCACAATTTTATTTAT+TGG | - | chr4.3:10844324-10844343 | MS.gene030876:CDS | 15.0% |
| !!! | AATTTTATTTATTGGCAATT+TGG | - | chr4.3:10844332-10844351 | MS.gene030876:CDS | 15.0% |
| !!! | TACATTTTTTCCATTATTTT+TGG | - | chr4.3:10845786-10845805 | MS.gene030876:CDS | 15.0% |
| !!! | TGGTTCATTTAATTTTTTTA+TGG | + | chr4.3:10845404-10845423 | None:intergenic | 15.0% |
| !! | AAATAAATATAATTTCGGTG+TGG | + | chr4.3:10844624-10844643 | None:intergenic | 20.0% |
| !! | AAATGACAAGTCAAAAAAAA+CGG | - | chr4.3:10843346-10843365 | MS.gene030876:intron | 20.0% |
| !! | ACACCGAAATTATATTTATT+TGG | - | chr4.3:10844623-10844642 | MS.gene030876:CDS | 20.0% |
| !! | ATTTACAGAAGAAATAATTC+TGG | + | chr4.3:10844532-10844551 | None:intergenic | 20.0% |
| !! | CAGTGTATATTCTAAATTAA+CGG | + | chr4.3:10844410-10844429 | None:intergenic | 20.0% |
| !! | GCTCCAAATAAATATAATTT+CGG | + | chr4.3:10844629-10844648 | None:intergenic | 20.0% |
| !! | TAGTTTCTTTATACAATTAC+TGG | - | chr4.3:10845302-10845321 | MS.gene030876:CDS | 20.0% |
| !! | TTCAAATTTAGTAAGATTCT+TGG | - | chr4.3:10843302-10843321 | MS.gene030876:intron | 20.0% |
| !!! | AATTTATAGTTTTTAAGCCA+AGG | + | chr4.3:10844715-10844734 | None:intergenic | 20.0% |
| !!! | ATTTTTCAAGTGTCATATTA+AGG | - | chr4.3:10845364-10845383 | MS.gene030876:CDS | 20.0% |
| !!! | TAATAATTTGGAATCAAAGA+TGG | - | chr4.3:10842872-10842891 | MS.gene030876:intron | 20.0% |
| !!! | TTTGTTTTTATTTCTCTTTC+TGG | - | chr4.3:10843409-10843428 | MS.gene030876:intron | 20.0% |
| ! | AAAAACAACTCATTTGAAGA+CGG | + | chr4.3:10843245-10843264 | None:intergenic | 25.0% |
| ! | ATATTTGCTTAACTCCATTA+AGG | - | chr4.3:10843741-10843760 | MS.gene030876:intron | 25.0% |
| ! | GAACATATGAGTTTATGTTT+GGG | - | chr4.3:10845481-10845500 | MS.gene030876:CDS | 25.0% |
| ! | GTAAGTACACAAATTATCAA+TGG | + | chr4.3:10845272-10845291 | None:intergenic | 25.0% |
| ! | TATTTGCTTAACTCCATTAA+GGG | - | chr4.3:10843742-10843761 | MS.gene030876:intron | 25.0% |
| ! | TCTTATAAACACTACAAATC+TGG | + | chr4.3:10842953-10842972 | None:intergenic | 25.0% |
| ! | TGAACATATGAGTTTATGTT+TGG | - | chr4.3:10845480-10845499 | MS.gene030876:CDS | 25.0% |
| ! | TGCAACAAGTATTTATGATT+AGG | + | chr4.3:10845966-10845985 | None:intergenic | 25.0% |
| !! | CGTTAATTTAGAATATACAC+TGG | - | chr4.3:10844408-10844427 | MS.gene030876:intron | 25.0% |
| !! | GATTGTTGTTCAAAAAGTTA+GGG | - | chr4.3:10843094-10843113 | MS.gene030876:intron | 25.0% |
| !! | TTGATAATTTGTGTACTTAC+TGG | - | chr4.3:10845272-10845291 | MS.gene030876:CDS | 25.0% |
| !!! | CTTAGAGTAATGTTTGTTAT+CGG | - | chr4.3:10845681-10845700 | MS.gene030876:CDS | 25.0% |
| !!! | GAAGGAGTTTGTTAATAATT+TGG | - | chr4.3:10842860-10842879 | MS.gene030876:intron | 25.0% |
| !!! | TTCAAATGAGTTGTTTTTAG+CGG | - | chr4.3:10843247-10843266 | MS.gene030876:intron | 25.0% |
| !!! | TTTGCTATTTGTCTAACTTT+GGG | - | chr4.3:10843621-10843640 | MS.gene030876:intron | 25.0% |
| !!! | TTTTACAAGTTTGCTATGTT+TGG | - | chr4.3:10844209-10844228 | MS.gene030876:intron | 25.0% |
| !!! | TTTTGGAGAATTTATTTGTG+TGG | - | chr4.3:10845755-10845774 | MS.gene030876:CDS | 25.0% |
| AAAAACGGAAAAAGAAGAAG+AGG | - | chr4.3:10843361-10843380 | MS.gene030876:intron | 30.0% | |
| AAAAATTAGAAGCTTACGCT+TGG | + | chr4.3:10845424-10845443 | None:intergenic | 30.0% | |
| AAACCATCTAAAAAATCTGC+AGG | + | chr4.3:10844782-10844801 | None:intergenic | 30.0% | |
| AACCATCTAAAAAATCTGCA+GGG | + | chr4.3:10844781-10844800 | None:intergenic | 30.0% | |
| AACTAATTAGGCTGTAAATC+TGG | - | chr4.3:10845851-10845870 | MS.gene030876:CDS | 30.0% | |
| AATTTGTAAGTTGCAGTTGA+TGG | - | chr4.3:10844248-10844267 | MS.gene030876:intron | 30.0% | |
| AGAGGATGAAATATACACTT+TGG | - | chr4.3:10843379-10843398 | MS.gene030876:intron | 30.0% | |
| ATACATATCTAGGCCTATTT+CGG | + | chr4.3:10846222-10846241 | None:intergenic | 30.0% | |
| ATATGATCCCTTAATTGTGA+AGG | - | chr4.3:10843905-10843924 | MS.gene030876:intron | 30.0% | |
| ATTAGCAGCTTCAAAAGAAA+GGG | + | chr4.3:10844952-10844971 | None:intergenic | 30.0% | |
| ATTTAGATGAGACTGTGAAT+AGG | - | chr4.3:10843150-10843169 | MS.gene030876:intron | 30.0% | |
| CGATAACAAACATTACTCTA+AGG | + | chr4.3:10845683-10845702 | None:intergenic | 30.0% | |
| CTCTTTATAATGCAGATTGA+GGG | - | chr4.3:10844044-10844063 | MS.gene030876:intron | 30.0% | |
| CTGAAGAAGAAATTAACAGA+TGG | - | chr4.3:10844090-10844109 | MS.gene030876:intron | 30.0% | |
| CTGAATGAGTTATTCAAGTA+TGG | - | chr4.3:10845187-10845206 | MS.gene030876:CDS | 30.0% | |
| GACAAAACCTTCACAATTAA+GGG | + | chr4.3:10843915-10843934 | None:intergenic | 30.0% | |
| GACACTTGAAAAATGAAGTT+GGG | + | chr4.3:10845358-10845377 | None:intergenic | 30.0% | |
| GAGTCATAATATCCATTAAC+AGG | + | chr4.3:10845913-10845932 | None:intergenic | 30.0% | |
| GTTAAGGAAAAGGATCAAAT+TGG | - | chr4.3:10843176-10843195 | MS.gene030876:intron | 30.0% | |
| TACACTGGAATATGTGTATA+TGG | + | chr4.3:10844572-10844591 | None:intergenic | 30.0% | |
| TACTGAAGAACTTACATCTT+TGG | - | chr4.3:10843676-10843695 | MS.gene030876:intron | 30.0% | |
| TATTAGTGATTTGAGAGATG+AGG | - | chr4.3:10842722-10842741 | MS.gene030876:intron | 30.0% | |
| TCATAATATCCATTAACAGG+TGG | + | chr4.3:10845910-10845929 | None:intergenic | 30.0% | |
| TCATGTTAACTGACAATACA+AGG | + | chr4.3:10845938-10845957 | None:intergenic | 30.0% | |
| TCTCTTTATAATGCAGATTG+AGG | - | chr4.3:10844043-10844062 | MS.gene030876:intron | 30.0% | |
| TCTTTATAATGCAGATTGAG+GGG | - | chr4.3:10844045-10844064 | MS.gene030876:intron | 30.0% | |
| TGACACTTGAAAAATGAAGT+TGG | + | chr4.3:10845359-10845378 | None:intergenic | 30.0% | |
| TGTTCAAAAAGTTAGGGATT+TGG | - | chr4.3:10843100-10843119 | MS.gene030876:intron | 30.0% | |
| TTCAACTGATCAATCAACAA+AGG | + | chr4.3:10842909-10842928 | None:intergenic | 30.0% | |
| TTGGGATTAAGAAGAAACAA+AGG | + | chr4.3:10845084-10845103 | None:intergenic | 30.0% | |
| TTTAGTAAGATTCTTGGAGA+TGG | - | chr4.3:10843308-10843327 | MS.gene030876:intron | 30.0% | |
| ! | AATCTATACATGAGTTGACT+AGG | - | chr4.3:10843072-10843091 | MS.gene030876:intron | 30.0% |
| ! | AGAATGTATGTTTTGTCATG+TGG | - | chr4.3:10843952-10843971 | MS.gene030876:intron | 30.0% |
| ! | ATCAAATTGGTTCTTTGCTT+AGG | - | chr4.3:10843189-10843208 | MS.gene030876:intron | 30.0% |
| ! | CAATGTTGATTGTAGATTCT+TGG | - | chr4.3:10845148-10845167 | MS.gene030876:CDS | 30.0% |
| ! | GAATAGGTTAGTTAAGGAAA+AGG | - | chr4.3:10843166-10843185 | MS.gene030876:intron | 30.0% |
| ! | GAATTATGAGATTGCTATTG+AGG | - | chr4.3:10842680-10842699 | MS.gene030876:intron | 30.0% |
| ! | GGATTGTTGTTCAAAAAGTT+AGG | - | chr4.3:10843093-10843112 | MS.gene030876:intron | 30.0% |
| ! | TGAAGTGGAAAAATTGCTTT+TGG | - | chr4.3:10844684-10844703 | MS.gene030876:intron | 30.0% |
| !! | AAGTGGAAAAATTGCTTTTG+GGG | - | chr4.3:10844686-10844705 | MS.gene030876:intron | 30.0% |
| !! | AATCTCACGGAATTTTTCAA+CGG | + | chr4.3:10842190-10842209 | None:intergenic | 30.0% |
| !! | AATTGAGAAGATTTCTGGTA+AGG | - | chr4.3:10842482-10842501 | MS.gene030876:intron | 30.0% |
| !! | GAAGTGGAAAAATTGCTTTT+GGG | - | chr4.3:10844685-10844704 | MS.gene030876:intron | 30.0% |
| !! | GTTTGCTATTTGTCTAACTT+TGG | - | chr4.3:10843620-10843639 | MS.gene030876:intron | 30.0% |
| !! | TATAAGATCATTGATGATGC+TGG | - | chr4.3:10842966-10842985 | MS.gene030876:intron | 30.0% |
| !!! | TTTTGAAATCTATTCCCTTC+TGG | + | chr4.3:10844828-10844847 | None:intergenic | 30.0% |
| AAAGGATGAAGTTACGAAAG+TGG | + | chr4.3:10845066-10845085 | None:intergenic | 35.0% | |
| AATCAAAGATGGAATCGTTG+AGG | - | chr4.3:10842883-10842902 | MS.gene030876:intron | 35.0% | |
| ACAGAATGATGCAAGTGTTA+AGG | - | chr4.3:10842623-10842642 | MS.gene030876:intron | 35.0% | |
| ACCATCTAAAAAATCTGCAG+GGG | + | chr4.3:10844780-10844799 | None:intergenic | 35.0% | |
| ACTGGAATTGAGAAGATTTC+TGG | - | chr4.3:10842477-10842496 | MS.gene030876:intron | 35.0% | |
| AGCACACTGTGAATGAATTA+AGG | - | chr4.3:10843568-10843587 | MS.gene030876:intron | 35.0% | |
| AGTTCATGGTTCATACTCAA+GGG | - | chr4.3:10845022-10845041 | MS.gene030876:intron | 35.0% | |
| ATCTACAATCAACATTGACC+AGG | + | chr4.3:10845145-10845164 | None:intergenic | 35.0% | |
| CAAAAAATGCCCAAAGTCAA+AGG | + | chr4.3:10845740-10845759 | None:intergenic | 35.0% | |
| CACAAATTATCAATGGCTCA+AGG | + | chr4.3:10845265-10845284 | None:intergenic | 35.0% | |
| CATTAGCAGCTTCAAAAGAA+AGG | + | chr4.3:10844953-10844972 | None:intergenic | 35.0% | |
| CGACAAAACCTTCACAATTA+AGG | + | chr4.3:10843916-10843935 | None:intergenic | 35.0% | |
| GAAGGTGAATTTGATGTGAT+CGG | + | chr4.3:10842153-10842172 | None:intergenic | 35.0% | |
| GAATTTGATGTGATCGGAAT+TGG | + | chr4.3:10842147-10842166 | None:intergenic | 35.0% | |
| GACTTCATTCAACCGATTAA+AGG | - | chr4.3:10842275-10842294 | MS.gene030876:CDS | 35.0% | |
| GATACGTAAAGAACTCAACA+AGG | + | chr4.3:10843483-10843502 | None:intergenic | 35.0% | |
| GGCAACTGTACCAAAAATAA+TGG | + | chr4.3:10845799-10845818 | None:intergenic | 35.0% | |
| GGTATGGAATGCTATTAGTT+AGG | - | chr4.3:10844175-10844194 | MS.gene030876:intron | 35.0% | |
| GTTGATTGTAGATTCTTGGT+GGG | - | chr4.3:10845152-10845171 | MS.gene030876:CDS | 35.0% | |
| TAAGGATGAGAAGTTGAATG+AGG | - | chr4.3:10842794-10842813 | MS.gene030876:intron | 35.0% | |
| TACTTTAAGCCACCTGTTAA+TGG | - | chr4.3:10845898-10845917 | MS.gene030876:CDS | 35.0% | |
| TAGTGGTCTATCTAAATTGC+AGG | - | chr4.3:10844654-10844673 | MS.gene030876:intron | 35.0% | |
| TCACAGTCTCATCTAAATTC+TGG | + | chr4.3:10843148-10843167 | None:intergenic | 35.0% | |
| TGAGAAATCGAGTCATATGA+TGG | - | chr4.3:10842452-10842471 | MS.gene030876:intron | 35.0% | |
| TGTAAATGAATTGAGCCAAG+CGG | + | chr4.3:10845548-10845567 | None:intergenic | 35.0% | |
| TTGATTGTAGATTCTTGGTG+GGG | - | chr4.3:10845153-10845172 | MS.gene030876:CDS | 35.0% | |
| TTTCTTCTCAGATTCCAACA+TGG | + | chr4.3:10846038-10846057 | None:intergenic | 35.0% | |
| ! | AAAAGTTAGGGATTTGGTTG+AGG | - | chr4.3:10843106-10843125 | MS.gene030876:intron | 35.0% |
| ! | AAAGAAGGTGTATCTCACAT+TGG | + | chr4.3:10845103-10845122 | None:intergenic | 35.0% |
| ! | AAGAAGGTGTATCTCACATT+GGG | + | chr4.3:10845102-10845121 | None:intergenic | 35.0% |
| ! | ATGAGGTTTCTGAGAGTTTA+AGG | - | chr4.3:10842811-10842830 | MS.gene030876:intron | 35.0% |
| ! | ATGTTTTGTCATGTGGTCAT+GGG | - | chr4.3:10843959-10843978 | MS.gene030876:intron | 35.0% |
| ! | GACTGTGAATAGGTTAGTTA+AGG | - | chr4.3:10843160-10843179 | MS.gene030876:intron | 35.0% |
| ! | GATGATATGCCTTTGACTTT+GGG | - | chr4.3:10845728-10845747 | MS.gene030876:CDS | 35.0% |
| ! | TATGTTTTGTCATGTGGTCA+TGG | - | chr4.3:10843958-10843977 | MS.gene030876:intron | 35.0% |
| ! | TGATGATATGCCTTTGACTT+TGG | - | chr4.3:10845727-10845746 | MS.gene030876:CDS | 35.0% |
| ! | TGTTGATTGTAGATTCTTGG+TGG | - | chr4.3:10845151-10845170 | MS.gene030876:CDS | 35.0% |
| ! | TTTATTTGGAGCAGCAATAG+TGG | - | chr4.3:10844637-10844656 | MS.gene030876:CDS | 35.0% |
| !! | AAGATTTCTGGTAAGGTGAA+TGG | - | chr4.3:10842489-10842508 | MS.gene030876:intron | 35.0% |
| !! | CATTGATGATGCTGGTTATT+CGG | - | chr4.3:10842974-10842993 | MS.gene030876:intron | 35.0% |
| !! | TACAAGTTTGCTATGTTTGG+AGG | - | chr4.3:10844212-10844231 | MS.gene030876:intron | 35.0% |
| !!! | CTTTGACTTTGGGCATTTTT+TGG | - | chr4.3:10845738-10845757 | MS.gene030876:CDS | 35.0% |
| !!! | TGTTTTTAGCGGCAGAAAAT+GGG | - | chr4.3:10843258-10843277 | MS.gene030876:intron | 35.0% |
| !!! | TTGTTTTTAGCGGCAGAAAA+TGG | - | chr4.3:10843257-10843276 | MS.gene030876:intron | 35.0% |
| !!! | TTTCTGGTTTTCAACGAAAC+TGG | - | chr4.3:10843425-10843444 | MS.gene030876:intron | 35.0% |
| AAAATGTGTTCATCCCTTGC+TGG | + | chr4.3:10844920-10844939 | None:intergenic | 40.0% | |
| AAACTCAACTCTGCCCTTAA+TGG | + | chr4.3:10843758-10843777 | None:intergenic | 40.0% | |
| AAAGTGGCAGCAAAGGAAAA+AGG | + | chr4.3:10845050-10845069 | None:intergenic | 40.0% | |
| AAATCTATTCCCTTCTGGTG+GGG | + | chr4.3:10844823-10844842 | None:intergenic | 40.0% | |
| AACCATGAACTGAGTCTGAA+AGG | + | chr4.3:10845013-10845032 | None:intergenic | 40.0% | |
| AAGAACGGAGAATGGAAAGA+AGG | + | chr4.3:10845118-10845137 | None:intergenic | 40.0% | |
| AAGTGGCAGCAAAGGAAAAA+GGG | + | chr4.3:10845049-10845068 | None:intergenic | 40.0% | |
| AATAACCGTGAGAAACACCA+AGG | + | chr4.3:10845645-10845664 | None:intergenic | 40.0% | |
| ACCATAGAGCTAAAGGGAAA+AGG | + | chr4.3:10844506-10844525 | None:intergenic | 40.0% | |
| ACTTGAAGAGAAGGAAAGAG+TGG | - | chr4.3:10843841-10843860 | MS.gene030876:intron | 40.0% | |
| ACTTGAGGTCTTCTAGACTA+AGG | - | chr4.3:10846134-10846153 | MS.gene030876:CDS | 40.0% | |
| ACTTTGTTGGAATTCAGCAG+CGG | - | chr4.3:10846269-10846288 | MS.gene030876:CDS | 40.0% | |
| AGGCTGTAAATCTGGTAGAT+TGG | - | chr4.3:10845859-10845878 | MS.gene030876:CDS | 40.0% | |
| ATAGGCCTAGATATGTATGC+TGG | - | chr4.3:10846224-10846243 | MS.gene030876:CDS | 40.0% | |
| ATGATGCAAGTGTTAAGGCT+AGG | - | chr4.3:10842628-10842647 | MS.gene030876:intron | 40.0% | |
| CAACTCATTTGAAGACGGAT+TGG | + | chr4.3:10843240-10843259 | None:intergenic | 40.0% | |
| CACATCAAATTCACCTTCAC+AGG | - | chr4.3:10842155-10842174 | MS.gene030876:CDS | 40.0% | |
| CAGTTCATGGTTCATACTCA+AGG | - | chr4.3:10845021-10845040 | MS.gene030876:intron | 40.0% | |
| CATCATTGCACAACTAAAGC+TGG | + | chr4.3:10844366-10844385 | None:intergenic | 40.0% | |
| CATTCTATGGTCGAGTTCTT+TGG | + | chr4.3:10843807-10843826 | None:intergenic | 40.0% | |
| CTTACTCACGACAAACTCAA+TGG | - | chr4.3:10845609-10845628 | MS.gene030876:CDS | 40.0% | |
| CTTGAGCAAGCACCTTTAAT+CGG | + | chr4.3:10842290-10842309 | None:intergenic | 40.0% | |
| CTTGAGGTCTTCTAGACTAA+GGG | - | chr4.3:10846135-10846154 | MS.gene030876:CDS | 40.0% | |
| GAAATCTATTCCCTTCTGGT+GGG | + | chr4.3:10844824-10844843 | None:intergenic | 40.0% | |
| TAGAGCTAAAGGGAAAAGGT+AGG | + | chr4.3:10844502-10844521 | None:intergenic | 40.0% | |
| TCGAGTCATATGATGGTTAC+TGG | - | chr4.3:10842459-10842478 | MS.gene030876:intron | 40.0% | |
| TGAAATCTATTCCCTTCTGG+TGG | + | chr4.3:10844825-10844844 | None:intergenic | 40.0% | |
| TGAGAACAGAGAAGACTTGA+GGG | - | chr4.3:10846195-10846214 | MS.gene030876:CDS | 40.0% | |
| TGATCGCAGTGACATAAACA+TGG | + | chr4.3:10844446-10844465 | None:intergenic | 40.0% | |
| TGATGCAAGTGTTAAGGCTA+GGG | - | chr4.3:10842629-10842648 | MS.gene030876:intron | 40.0% | |
| TGATGTGATCGGAATTGGAT+CGG | + | chr4.3:10842142-10842161 | None:intergenic | 40.0% | |
| TGATTGTAGATTCTTGGTGG+GGG | - | chr4.3:10845154-10845173 | MS.gene030876:CDS | 40.0% | |
| TGCAGGGGCTGAAATAAAAA+GGG | + | chr4.3:10844765-10844784 | None:intergenic | 40.0% | |
| TGCTTGGGGATGAACTAATT+AGG | - | chr4.3:10845839-10845858 | MS.gene030876:CDS | 40.0% | |
| TGGAAGACCATAGAGCTAAA+GGG | + | chr4.3:10844512-10844531 | None:intergenic | 40.0% | |
| TGGTCTATCTAAATTGCAGG+CGG | - | chr4.3:10844657-10844676 | MS.gene030876:intron | 40.0% | |
| TTAAGGAAGGAAGAGAGTGA+GGG | - | chr4.3:10842828-10842847 | MS.gene030876:intron | 40.0% | |
| TTCAAAAGAAAGGGCTTTGC+AGG | + | chr4.3:10844943-10844962 | None:intergenic | 40.0% | |
| TTGAGAACAGAGAAGACTTG+AGG | - | chr4.3:10846194-10846213 | MS.gene030876:CDS | 40.0% | |
| TTTAAGGAAGGAAGAGAGTG+AGG | - | chr4.3:10842827-10842846 | MS.gene030876:intron | 40.0% | |
| ! | GAAGCTGCTAATGCATTTTC+AGG | - | chr4.3:10844960-10844979 | MS.gene030876:intron | 40.0% |
| ! | GAGTGCTCTAAGTTTAGACT+TGG | + | chr4.3:10845526-10845545 | None:intergenic | 40.0% |
| ! | GGTTTCTGAGAGTTTAAGGA+AGG | - | chr4.3:10842815-10842834 | MS.gene030876:intron | 40.0% |
| ! | TCAATGGATCTTTTCAGCCT+TGG | - | chr4.3:10845625-10845644 | MS.gene030876:CDS | 40.0% |
| ! | TCTGGTAAGGTGAATGGTTT+TGG | - | chr4.3:10842495-10842514 | MS.gene030876:intron | 40.0% |
| ! | TGAAGTCTGTAACTCCGTTT+TGG | + | chr4.3:10842262-10842281 | None:intergenic | 40.0% |
| !! | AGGTGTTGAACAGCAATTTG+TGG | - | chr4.3:10844148-10844167 | MS.gene030876:intron | 40.0% |
| !! | TGCTTTGGAGGATGTTGTTA+AGG | - | chr4.3:10843518-10843537 | MS.gene030876:intron | 40.0% |
| !! | TTAGGAGTGCTTTGTCAAAG+AGG | - | chr4.3:10843207-10843226 | MS.gene030876:intron | 40.0% |
| !! | TTGCTTTTCCTGATCAAGCT+CGG | + | chr4.3:10842217-10842236 | None:intergenic | 40.0% |
| !!! | ACCTTTTCCCTTTAGCTCTA+TGG | - | chr4.3:10844502-10844521 | MS.gene030876:intron | 40.0% |
| !!! | TAACTCCGTTTTGGCTTTCT+CGG | + | chr4.3:10842253-10842272 | None:intergenic | 40.0% |
| AACTCGACCATAGAATGCAC+CGG | - | chr4.3:10843810-10843829 | MS.gene030876:intron | 45.0% | |
| AAGAAAACTGCAGCCGTTGA+GGG | - | chr4.3:10842750-10842769 | MS.gene030876:intron | 45.0% | |
| AATCTATTCCCTTCTGGTGG+GGG | + | chr4.3:10844822-10844841 | None:intergenic | 45.0% | |
| AGAAACTGCGAGGCAATTAG+AGG | - | chr4.3:10842392-10842411 | MS.gene030876:CDS | 45.0% | |
| AGAGGCAAAGCAATCCATGT+TGG | - | chr4.3:10846021-10846040 | MS.gene030876:CDS | 45.0% | |
| AGATTTCTCTGCTGCATCTC+TGG | + | chr4.3:10846101-10846120 | None:intergenic | 45.0% | |
| AGCAATTTGTGGCACAGGTA+TGG | - | chr4.3:10844159-10844178 | MS.gene030876:intron | 45.0% | |
| AGGGGCTGAAATAAAAAGGG+GGG | + | chr4.3:10844762-10844781 | None:intergenic | 45.0% | |
| AGTGGCAGCAAAGGAAAAAG+GGG | + | chr4.3:10845048-10845067 | None:intergenic | 45.0% | |
| AGTTACGAAAGTGGCAGCAA+AGG | + | chr4.3:10845057-10845076 | None:intergenic | 45.0% | |
| AGTTCGATGTGTGTCATGCT+AGG | - | chr4.3:10844863-10844882 | MS.gene030876:CDS | 45.0% | |
| CAGGGGCTGAAATAAAAAGG+GGG | + | chr4.3:10844763-10844782 | None:intergenic | 45.0% | |
| CATGGCCAGCATACATATCT+AGG | + | chr4.3:10846232-10846251 | None:intergenic | 45.0% | |
| CATTGACCAGGAGAGAAGAA+CGG | + | chr4.3:10845133-10845152 | None:intergenic | 45.0% | |
| CTAGATATGTATGCTGGCCA+TGG | - | chr4.3:10846230-10846249 | MS.gene030876:CDS | 45.0% | |
| CTAGGGAACAGATTGAACAG+AGG | - | chr4.3:10842658-10842677 | MS.gene030876:intron | 45.0% | |
| CTCCTTTCAGACTCAGTTCA+TGG | - | chr4.3:10845008-10845027 | MS.gene030876:intron | 45.0% | |
| CTCTCAAGTTAGCAGACTTG+AGG | - | chr4.3:10846119-10846138 | MS.gene030876:CDS | 45.0% | |
| CTGCAGGGGCTGAAATAAAA+AGG | + | chr4.3:10844766-10844785 | None:intergenic | 45.0% | |
| CTGGAAGACCATAGAGCTAA+AGG | + | chr4.3:10844513-10844532 | None:intergenic | 45.0% | |
| GAAATATACCGGTATGGCTG+CGG | - | chr4.3:10842548-10842567 | MS.gene030876:intron | 45.0% | |
| GACTGATACGCAACAGCAAA+CGG | - | chr4.3:10846291-10846310 | MS.gene030876:CDS | 45.0% | |
| GAGAACAGAGAAGACTTGAG+GGG | - | chr4.3:10846196-10846215 | MS.gene030876:CDS | 45.0% | |
| GAGTGCTTTGTCAAAGAGGA+TGG | - | chr4.3:10843211-10843230 | MS.gene030876:intron | 45.0% | |
| GCAAACGGCTTCTAACGAAA+TGG | - | chr4.3:10846306-10846325 | MS.gene030876:CDS | 45.0% | |
| GCAGGGGCTGAAATAAAAAG+GGG | + | chr4.3:10844764-10844783 | None:intergenic | 45.0% | |
| GCTTTCTGAGTCGTTGTTTG+TGG | - | chr4.3:10842998-10843017 | MS.gene030876:intron | 45.0% | |
| GTCGCAGAAATATACCGGTA+TGG | - | chr4.3:10842542-10842561 | MS.gene030876:intron | 45.0% | |
| GTTGTTTGTGGCGCAAGAAA+CGG | - | chr4.3:10843010-10843029 | MS.gene030876:intron | 45.0% | |
| TAACAGCATCATCACGCAAC+CGG | + | chr4.3:10842341-10842360 | None:intergenic | 45.0% | |
| TAAGGCTAGGGATCAAGCTA+GGG | - | chr4.3:10842641-10842660 | MS.gene030876:intron | 45.0% | |
| TCCAAGCTAAAGCTCAAGCA+TGG | - | chr4.3:10845215-10845234 | MS.gene030876:CDS | 45.0% | |
| TCGTGAGTAAGAAGATGCCA+TGG | + | chr4.3:10845600-10845619 | None:intergenic | 45.0% | |
| TCTTTACGTATCCACTGTGC+AGG | - | chr4.3:10843491-10843510 | MS.gene030876:intron | 45.0% | |
| TGAAAGGAGTAACTCAGCAG+AGG | + | chr4.3:10844997-10845016 | None:intergenic | 45.0% | |
| TGAACAGCAATTTGTGGCAC+AGG | - | chr4.3:10844154-10844173 | MS.gene030876:intron | 45.0% | |
| TGCGAGGCAATTAGAGGAAT+CGG | - | chr4.3:10842398-10842417 | MS.gene030876:CDS | 45.0% | |
| TGCTATTGAGGTTTCGCAGT+TGG | - | chr4.3:10842692-10842711 | MS.gene030876:intron | 45.0% | |
| TGCTTGCTCAAGAAGCCATA+CGG | - | chr4.3:10842298-10842317 | MS.gene030876:CDS | 45.0% | |
| TTAAGGCTAGGGATCAAGCT+AGG | - | chr4.3:10842640-10842659 | MS.gene030876:intron | 45.0% | |
| TTCTAGACTAAGGGACAGAG+TGG | - | chr4.3:10846144-10846163 | MS.gene030876:CDS | 45.0% | |
| TTGGTACAGTTGCCATTCGT+TGG | - | chr4.3:10845805-10845824 | MS.gene030876:CDS | 45.0% | |
| ! | ACCATGCTTGAGCTTTAGCT+TGG | + | chr4.3:10845219-10845238 | None:intergenic | 45.0% |
| ! | AGCTTCTAGAAGAAACTGCG+AGG | - | chr4.3:10842382-10842401 | MS.gene030876:CDS | 45.0% |
| ! | ATACGGAAGCGCGATGAATT+CGG | - | chr4.3:10842315-10842334 | MS.gene030876:CDS | 45.0% |
| ! | GGAGAGGGATTTGGTTGTTA+AGG | - | chr4.3:10842776-10842795 | MS.gene030876:intron | 45.0% |
| ! | GGTAATTTGCGACAGGCATT+TGG | - | chr4.3:10843987-10844006 | MS.gene030876:intron | 45.0% |
| ! | GTTGCGTGATGATGCTGTTA+GGG | - | chr4.3:10842341-10842360 | MS.gene030876:CDS | 45.0% |
| ! | TAAACTTAGAGCACTCCGCT+TGG | - | chr4.3:10845530-10845549 | MS.gene030876:CDS | 45.0% |
| ! | TGATGATGCTGTTAGGGAGA+AGG | - | chr4.3:10842347-10842366 | MS.gene030876:CDS | 45.0% |
| !! | TTCAGCCTTGGTGTTTCTCA+CGG | - | chr4.3:10845637-10845656 | MS.gene030876:CDS | 45.0% |
| !!! | GCCCCTGCAGATTTTTTAGA+TGG | - | chr4.3:10844776-10844795 | MS.gene030876:intron | 45.0% |
| !!! | GGTAAGGTGAATGGTTTTGG+TGG | - | chr4.3:10842498-10842517 | MS.gene030876:intron | 45.0% |
| !!! | GTGAATGGTTTTGGTGGAAG+TGG | - | chr4.3:10842504-10842523 | MS.gene030876:intron | 45.0% |
| AAGACTTGAGGGGCCGAAAT+AGG | - | chr4.3:10846206-10846225 | MS.gene030876:CDS | 50.0% | |
| ACGGAGACTTCATCCTGTGA+AGG | + | chr4.3:10842171-10842190 | None:intergenic | 50.0% | |
| ACTCGACCATAGAATGCACC+GGG | - | chr4.3:10843811-10843830 | MS.gene030876:intron | 50.0% | |
| AGATTCCATCCCAGCCAAAG+AGG | + | chr4.3:10843057-10843076 | None:intergenic | 50.0% | |
| ATAAGTCACCGCAGCCATAC+CGG | + | chr4.3:10842559-10842578 | None:intergenic | 50.0% | |
| ATCCCTCTCCAAACCCTCAA+CGG | + | chr4.3:10842766-10842785 | None:intergenic | 50.0% | |
| ATGGTCGAGTTCTTTGGCCT+GGG | + | chr4.3:10843801-10843820 | None:intergenic | 50.0% | |
| ATTGCAGGCGGATAGTGAAG+TGG | - | chr4.3:10844669-10844688 | MS.gene030876:intron | 50.0% | |
| CAGGAGAGAAGAACGGAGAA+TGG | + | chr4.3:10845126-10845145 | None:intergenic | 50.0% | |
| CATTCTCCGTTCTTCTCTCC+TGG | - | chr4.3:10845124-10845143 | MS.gene030876:CDS | 50.0% | |
| CTGAAATAAAAAGGGGGGGG+GGG | + | chr4.3:10844757-10844776 | None:intergenic | 50.0% | |
| GAAGAAAACTGCAGCCGTTG+AGG | - | chr4.3:10842749-10842768 | MS.gene030876:intron | 50.0% | |
| GAATTCATCGCGCTTCCGTA+TGG | + | chr4.3:10842316-10842335 | None:intergenic | 50.0% | |
| GAGTGAGGGTTTGCAGTTGA+AGG | - | chr4.3:10842842-10842861 | MS.gene030876:intron | 50.0% | |
| GCAATTAGAGGAATCGGCGA+AGG | - | chr4.3:10842404-10842423 | MS.gene030876:CDS | 50.0% | |
| GCAGATTGAGGGGCTAATGA+TGG | - | chr4.3:10844055-10844074 | MS.gene030876:intron | 50.0% | |
| GCTCAAGCAGGAACTTGAAG+AGG | - | chr4.3:10846003-10846022 | MS.gene030876:CDS | 50.0% | |
| GCTCATCTTTGATGCAGCCA+TGG | - | chr4.3:10845580-10845599 | MS.gene030876:CDS | 50.0% | |
| GCTGAAATAAAAAGGGGGGG+GGG | + | chr4.3:10844758-10844777 | None:intergenic | 50.0% | |
| GCTGGAGATGAGCAGTGAAA+GGG | + | chr4.3:10844902-10844921 | None:intergenic | 50.0% | |
| GGCTGAAATAAAAAGGGGGG+GGG | + | chr4.3:10844759-10844778 | None:intergenic | 50.0% | |
| GGGCTGAAATAAAAAGGGGG+GGG | + | chr4.3:10844760-10844779 | None:intergenic | 50.0% | |
| GGGGCTGAAATAAAAAGGGG+GGG | + | chr4.3:10844761-10844780 | None:intergenic | 50.0% | |
| GGTGGAGGAACTTGAAGAGA+AGG | - | chr4.3:10843832-10843851 | MS.gene030876:intron | 50.0% | |
| TAAGCAGCACATAGAAGCCC+AGG | - | chr4.3:10843781-10843800 | MS.gene030876:intron | 50.0% | |
| TATGGTCGAGTTCTTTGGCC+TGG | + | chr4.3:10843802-10843821 | None:intergenic | 50.0% | |
| TCACTGCTCATCTCCAGCAA+GGG | - | chr4.3:10844904-10844923 | MS.gene030876:intron | 50.0% | |
| TGAAATAAAAAGGGGGGGGG+GGG | + | chr4.3:10844756-10844775 | None:intergenic | 50.0% | |
| TGAGAATGTACGCGCCTCTT+TGG | - | chr4.3:10843040-10843059 | MS.gene030876:intron | 50.0% | |
| TGAGGGTTTGGAGAGGGATT+TGG | - | chr4.3:10842767-10842786 | MS.gene030876:intron | 50.0% | |
| TGCAGGACACAACACTACAC+TGG | + | chr4.3:10844587-10844606 | None:intergenic | 50.0% | |
| TGCTGGAGATGAGCAGTGAA+AGG | + | chr4.3:10844903-10844922 | None:intergenic | 50.0% | |
| TGCTGTTAGGGAGAAGGAAG+AGG | - | chr4.3:10842353-10842372 | MS.gene030876:CDS | 50.0% | |
| TTCACTGCTCATCTCCAGCA+AGG | - | chr4.3:10844903-10844922 | MS.gene030876:intron | 50.0% | |
| ! | CATGTTTTCCCCCACCAGAA+GGG | - | chr4.3:10844811-10844830 | MS.gene030876:intron | 50.0% |
| ! | GGTTGCGTGATGATGCTGTT+AGG | - | chr4.3:10842340-10842359 | MS.gene030876:CDS | 50.0% |
| ! | TCATGTTTTCCCCCACCAGA+AGG | - | chr4.3:10844810-10844829 | MS.gene030876:intron | 50.0% |
| ! | TCTCTTCAAGTTCCTCCACC+CGG | + | chr4.3:10843832-10843851 | None:intergenic | 50.0% |
| !! | AGCGGCAGAAAATGGGTTGA+GGG | - | chr4.3:10843265-10843284 | MS.gene030876:intron | 50.0% |
| !! | GAAAATGGGTTGAGGGAGGT+TGG | - | chr4.3:10843272-10843291 | MS.gene030876:intron | 50.0% |
| !! | GGGGCTAATGATGGACATTG+CGG | - | chr4.3:10844064-10844083 | MS.gene030876:intron | 50.0% |
| !! | TAGCGGCAGAAAATGGGTTG+AGG | - | chr4.3:10843264-10843283 | MS.gene030876:intron | 50.0% |
| !!! | AATTGCTTTTGGGGCTGCCT+TGG | - | chr4.3:10844695-10844714 | MS.gene030876:intron | 50.0% |
| AAATAAAAAGGGGGGGGGGG+GGG | + | chr4.3:10844754-10844773 | None:intergenic | 55.0% | |
| AACTGCAGCCGTTGAGGGTT+TGG | - | chr4.3:10842755-10842774 | MS.gene030876:intron | 55.0% | |
| AATGTACGCGCCTCTTTGGC+TGG | - | chr4.3:10843044-10843063 | MS.gene030876:intron | 55.0% | |
| AGCCGTTGAGGGTTTGGAGA+GGG | - | chr4.3:10842761-10842780 | MS.gene030876:intron | 55.0% | |
| ATGTACGCGCCTCTTTGGCT+GGG | - | chr4.3:10843045-10843064 | MS.gene030876:intron | 55.0% | |
| ATGTATGCTGGCCATGGCAG+TGG | - | chr4.3:10846236-10846255 | MS.gene030876:CDS | 55.0% | |
| CAAGCTCGGCGAGAATCTCA+CGG | + | chr4.3:10842203-10842222 | None:intergenic | 55.0% | |
| CCGCGGTCGCAGAAATATAC+CGG | - | chr4.3:10842537-10842556 | MS.gene030876:intron | 55.0% | |
| CGAATCGGCATCTAAGTCGC+CGG | + | chr4.3:10842091-10842110 | None:intergenic | 55.0% | |
| GAAATAAAAAGGGGGGGGGG+GGG | + | chr4.3:10844755-10844774 | None:intergenic | 55.0% | |
| GATTCTCGCCGAGCTTGATC+AGG | - | chr4.3:10842206-10842225 | MS.gene030876:CDS | 55.0% | |
| GCAGTTGTCAACGCTCAAGC+AGG | - | chr4.3:10845991-10846010 | MS.gene030876:CDS | 55.0% | |
| GGAGCGGCAAGGATTACGAT+CGG | - | chr4.3:10842425-10842444 | MS.gene030876:intron | 55.0% | |
| GGTATGGCTGCGGTGACTTA+TGG | - | chr4.3:10842558-10842577 | MS.gene030876:intron | 55.0% | |
| GTAGTGTTGTGTCCTGCAGC+TGG | - | chr4.3:10844589-10844608 | MS.gene030876:CDS | 55.0% | |
| TACGTATCCACTGTGCAGGC+TGG | - | chr4.3:10843495-10843514 | MS.gene030876:intron | 55.0% | |
| TAGAGGAATCGGCGAAGGAG+CGG | - | chr4.3:10842409-10842428 | MS.gene030876:CDS | 55.0% | |
| ! | CCGGTATATTTCTGCGACCG+CGG | + | chr4.3:10842540-10842559 | None:intergenic | 55.0% |
| ! | CGGCGACTTAGATGCCGATT+CGG | - | chr4.3:10842089-10842108 | MS.gene030876:CDS | 55.0% |
| ! | GGCTGTGGGTAATTTGCGAC+AGG | - | chr4.3:10843980-10843999 | MS.gene030876:intron | 55.0% |
| ! | GTCATGTGGTCATGGGCTGT+GGG | - | chr4.3:10843966-10843985 | MS.gene030876:intron | 55.0% |
| ! | TGGCTCGGCATGGACTTTGT+TGG | - | chr4.3:10846256-10846275 | MS.gene030876:CDS | 55.0% |
| ! | TGTCATGTGGTCATGGGCTG+TGG | - | chr4.3:10843965-10843984 | MS.gene030876:intron | 55.0% |
| !! | GGCAGAAAATGGGTTGAGGG+AGG | - | chr4.3:10843268-10843287 | MS.gene030876:intron | 55.0% |
| !!! | CTCCGTTTTGGCTTTCTCGG+CGG | + | chr4.3:10842250-10842269 | None:intergenic | 55.0% |
| AATAAAAAGGGGGGGGGGGG+GGG | + | chr4.3:10844753-10844772 | None:intergenic | 60.0% | |
| AGTTCATCCCCAAGCAGCGC+AGG | + | chr4.3:10845835-10845854 | None:intergenic | 60.0% | |
| CAAGAAGCTGCTGCAGGCAC+AGG | - | chr4.3:10844128-10844147 | MS.gene030876:intron | 60.0% | |
| CACTGTGCAGGCTGGTGCTT+TGG | - | chr4.3:10843503-10843522 | MS.gene030876:intron | 60.0% | |
| CAGCCGTTGAGGGTTTGGAG+AGG | - | chr4.3:10842760-10842779 | MS.gene030876:intron | 60.0% | |
| CCATAGAATGCACCGGGTGG+AGG | - | chr4.3:10843817-10843836 | MS.gene030876:intron | 60.0% | |
| CCTCCACCCGGTGCATTCTA+TGG | + | chr4.3:10843820-10843839 | None:intergenic | 60.0% | |
| CGACCATAGAATGCACCGGG+TGG | - | chr4.3:10843814-10843833 | MS.gene030876:intron | 60.0% | |
| CGCCGCCGAGAAAGCCAAAA+CGG | - | chr4.3:10842245-10842264 | MS.gene030876:CDS | 60.0% | |
| GCAGAGCAAGAAGCTGCTGC+AGG | - | chr4.3:10844122-10844141 | MS.gene030876:intron | 60.0% | |
| GTTCATCCCCAAGCAGCGCA+GGG | + | chr4.3:10845834-10845853 | None:intergenic | 60.0% | |
| TGCTGCATCTCTGGCTGCCA+TGG | + | chr4.3:10846092-10846111 | None:intergenic | 60.0% | |
| TGTGCAGGCTGGTGCTTTGG+AGG | - | chr4.3:10843506-10843525 | MS.gene030876:intron | 60.0% | |
| ! | CAAAGCACCAGCCTGCACAG+TGG | + | chr4.3:10843505-10843524 | None:intergenic | 60.0% |
| ! | GGAAGCGCGATGAATTCGGC+CGG | - | chr4.3:10842319-10842338 | MS.gene030876:CDS | 60.0% |
| !! | GAAGTGGAAGCGCTTTGCCG+CGG | - | chr4.3:10842520-10842539 | MS.gene030876:intron | 60.0% |
| !! | GACGTCGCTGAGCACCGAAT+CGG | + | chr4.3:10842106-10842125 | None:intergenic | 60.0% |
| ACGCGCCTCTTTGGCTGGGA+TGG | - | chr4.3:10843049-10843068 | MS.gene030876:intron | 65.0% | |
| AGCGCAGGGCAGCCAACGAA+TGG | + | chr4.3:10845820-10845839 | None:intergenic | 65.0% | |
| ATAAAAAGGGGGGGGGGGGG+GGG | + | chr4.3:10844752-10844771 | None:intergenic | 65.0% | |
| CTCAGCGACGTCGAGGACGA+CGG | - | chr4.3:10842114-10842133 | MS.gene030876:CDS | 65.0% | |
| GAATCGGCGAAGGAGCGGCA+AGG | - | chr4.3:10842414-10842433 | MS.gene030876:CDS | 65.0% | |
| TCCATGCCGAGCCACTGCCA+TGG | + | chr4.3:10846250-10846269 | None:intergenic | 65.0% | |
| TGCTGGCCATGGCAGTGGCT+CGG | - | chr4.3:10846241-10846260 | MS.gene030876:CDS | 65.0% | |
| TTGGCTGCCCTGCGCTGCTT+GGG | - | chr4.3:10845824-10845843 | MS.gene030876:CDS | 65.0% | |
| !! | TTCGGTGCTCAGCGACGTCG+AGG | - | chr4.3:10842107-10842126 | MS.gene030876:CDS | 65.0% |
| GGCATCTAAGTCGCCGGCGC+CGG | + | chr4.3:10842085-10842104 | None:intergenic | 70.0% | |
| GTGTCCTGCAGCTGGAGCGC+TGG | - | chr4.3:10844597-10844616 | MS.gene030876:CDS | 70.0% | |
| GTTGGCTGCCCTGCGCTGCT+TGG | - | chr4.3:10845823-10845842 | MS.gene030876:CDS | 70.0% | |
| TGGCTGCCCTGCGCTGCTTG+GGG | - | chr4.3:10845825-10845844 | MS.gene030876:CDS | 70.0% | |
| TGGTCCAGCGCTCCAGCTGC+AGG | + | chr4.3:10844604-10844623 | None:intergenic | 70.0% | |
| ! | GCCATGGCAGTGGCTCGGCA+TGG | - | chr4.3:10846246-10846265 | MS.gene030876:CDS | 70.0% |
| ! | GGGGGGGGGGGGGGGAATGA+GGG | + | chr4.3:10844744-10844763 | None:intergenic | 80.0% |
| ! | GGGGGGGGGGGGGGGGAATG+AGG | + | chr4.3:10844745-10844764 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 10842078 | 10846351 | 10842078 | ID=MS.gene030876 |
| chr4.3 | mRNA | 10842078 | 10846351 | 10842078 | ID=MS.gene030876.t1;Parent=MS.gene030876 |
| chr4.3 | exon | 10845029 | 10846351 | 10845029 | ID=MS.gene030876.t1.exon1;Parent=MS.gene030876.t1 |
| chr4.3 | CDS | 10845029 | 10846351 | 10845029 | ID=cds.MS.gene030876.t1;Parent=MS.gene030876.t1 |
| chr4.3 | exon | 10844840 | 10844916 | 10844840 | ID=MS.gene030876.t1.exon2;Parent=MS.gene030876.t1 |
| chr4.3 | CDS | 10844840 | 10844916 | 10844840 | ID=cds.MS.gene030876.t1;Parent=MS.gene030876.t1 |
| chr4.3 | exon | 10844555 | 10844666 | 10844555 | ID=MS.gene030876.t1.exon3;Parent=MS.gene030876.t1 |
| chr4.3 | CDS | 10844555 | 10844666 | 10844555 | ID=cds.MS.gene030876.t1;Parent=MS.gene030876.t1 |
| chr4.3 | exon | 10844254 | 10844370 | 10844254 | ID=MS.gene030876.t1.exon4;Parent=MS.gene030876.t1 |
| chr4.3 | CDS | 10844254 | 10844370 | 10844254 | ID=cds.MS.gene030876.t1;Parent=MS.gene030876.t1 |
| chr4.3 | exon | 10842078 | 10842434 | 10842078 | ID=MS.gene030876.t1.exon5;Parent=MS.gene030876.t1 |
| chr4.3 | CDS | 10842078 | 10842434 | 10842078 | ID=cds.MS.gene030876.t1;Parent=MS.gene030876.t1 |
| Gene Sequence |
| Protein sequence |
