Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27997.t1 | XP_013446717.1 | 97.9 | 661 | 14 | 0 | 1 | 661 | 1 | 661 | 0.00E+00 | 1092.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27997.t1 | A0A072TT98 | 97.9 | 661 | 14 | 0 | 1 | 661 | 1 | 661 | 0.0e+00 | 1092.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene27997 | 0.830531 | 2.79E-55 | -1.69E-46 |
| MS.gene04918 | MS.gene27997 | 0.851265 | 9.93E-61 | -1.69E-46 |
| MS.gene04919 | MS.gene27997 | 0.831265 | 1.84E-55 | -1.69E-46 |
| MS.gene04920 | MS.gene27997 | 0.854673 | 1.05E-61 | -1.69E-46 |
| MS.gene049254 | MS.gene27997 | 0.811406 | 7.11E-51 | -1.69E-46 |
| MS.gene049283 | MS.gene27997 | 0.880204 | 6.65E-70 | -1.69E-46 |
| MS.gene049368 | MS.gene27997 | 0.84092 | 6.50E-58 | -1.69E-46 |
| MS.gene049419 | MS.gene27997 | -0.84733 | 1.24E-59 | -1.69E-46 |
| MS.gene049452 | MS.gene27997 | 0.811128 | 8.17E-51 | -1.69E-46 |
| MS.gene049499 | MS.gene27997 | 0.883321 | 4.95E-71 | -1.69E-46 |
| MS.gene049801 | MS.gene27997 | 0.817978 | 2.49E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene27997 | 0.885753 | 6.20E-72 | -1.69E-46 |
| MS.gene050085 | MS.gene27997 | 0.81473 | 1.33E-51 | -1.69E-46 |
| MS.gene050359 | MS.gene27997 | 0.826769 | 2.26E-54 | -1.69E-46 |
| MS.gene050414 | MS.gene27997 | 0.84743 | 1.16E-59 | -1.69E-46 |
| MS.gene050571 | MS.gene27997 | 0.82182 | 3.30E-53 | -1.69E-46 |
| MS.gene050646 | MS.gene27997 | 0.869975 | 2.07E-66 | -1.69E-46 |
| MS.gene050654 | MS.gene27997 | 0.87575 | 2.41E-68 | -1.69E-46 |
| MS.gene050689 | MS.gene27997 | 0.806681 | 7.31E-50 | -1.69E-46 |
| MS.gene050737 | MS.gene27997 | 0.839078 | 1.96E-57 | -1.69E-46 |
| MS.gene050759 | MS.gene27997 | 0.809447 | 1.88E-50 | -1.69E-46 |
| MS.gene050931 | MS.gene27997 | 0.820818 | 5.61E-53 | -1.69E-46 |
| MS.gene050941 | MS.gene27997 | 0.863234 | 2.88E-64 | -1.69E-46 |
| MS.gene050945 | MS.gene27997 | 0.817549 | 3.11E-52 | -1.69E-46 |
| MS.gene051003 | MS.gene27997 | 0.836626 | 8.38E-57 | -1.69E-46 |
| MS.gene051122 | MS.gene27997 | 0.820787 | 5.70E-53 | -1.69E-46 |
| MS.gene051184 | MS.gene27997 | 0.835528 | 1.59E-56 | -1.69E-46 |
| MS.gene051209 | MS.gene27997 | 0.843855 | 1.08E-58 | -1.69E-46 |
| MS.gene051234 | MS.gene27997 | 0.811066 | 8.43E-51 | -1.69E-46 |
| MS.gene051275 | MS.gene27997 | 0.813108 | 3.03E-51 | -1.69E-46 |
| MS.gene051343 | MS.gene27997 | 0.83118 | 1.93E-55 | -1.69E-46 |
| MS.gene051363 | MS.gene27997 | 0.804673 | 1.93E-49 | -1.69E-46 |
| MS.gene051597 | MS.gene27997 | 0.816526 | 5.28E-52 | -1.69E-46 |
| MS.gene051699 | MS.gene27997 | 0.8142 | 1.74E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene27997 | 0.800192 | 1.62E-48 | -1.69E-46 |
| MS.gene051800 | MS.gene27997 | 0.801903 | 7.23E-49 | -1.69E-46 |
| MS.gene051831 | MS.gene27997 | 0.802082 | 6.64E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene27997 | 0.813446 | 2.55E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene27997 | 0.823969 | 1.04E-53 | -1.69E-46 |
| MS.gene052016 | MS.gene27997 | 0.812587 | 3.93E-51 | -1.69E-46 |
| MS.gene052072 | MS.gene27997 | 0.819655 | 1.04E-52 | -1.69E-46 |
| MS.gene052118 | MS.gene27997 | 0.817026 | 4.08E-52 | -1.69E-46 |
| MS.gene052242 | MS.gene27997 | -0.800716 | 1.26E-48 | -1.69E-46 |
| MS.gene052307 | MS.gene27997 | 0.849079 | 4.07E-60 | -1.69E-46 |
| MS.gene052342 | MS.gene27997 | 0.825035 | 5.84E-54 | -1.69E-46 |
| MS.gene052434 | MS.gene27997 | 0.810264 | 1.26E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene27997 | 0.830922 | 2.24E-55 | -1.69E-46 |
| MS.gene052518 | MS.gene27997 | 0.842452 | 2.56E-58 | -1.69E-46 |
| MS.gene052533 | MS.gene27997 | 0.816872 | 4.42E-52 | -1.69E-46 |
| MS.gene052609 | MS.gene27997 | 0.831253 | 1.85E-55 | -1.69E-46 |
| MS.gene052674 | MS.gene27997 | 0.826771 | 2.26E-54 | -1.69E-46 |
| MS.gene052675 | MS.gene27997 | 0.828284 | 9.79E-55 | -1.69E-46 |
| MS.gene052677 | MS.gene27997 | 0.826265 | 2.98E-54 | -1.69E-46 |
| MS.gene052932 | MS.gene27997 | 0.819387 | 1.19E-52 | -1.69E-46 |
| MS.gene052954 | MS.gene27997 | 0.816603 | 5.08E-52 | -1.69E-46 |
| MS.gene053058 | MS.gene27997 | 0.817298 | 3.55E-52 | -1.69E-46 |
| MS.gene053079 | MS.gene27997 | 0.832533 | 8.96E-56 | -1.69E-46 |
| MS.gene053272 | MS.gene27997 | -0.830873 | 2.30E-55 | -1.69E-46 |
| MS.gene053456 | MS.gene27997 | 0.807704 | 4.44E-50 | -1.69E-46 |
| MS.gene05350 | MS.gene27997 | 0.814314 | 1.64E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene27997 | 0.816694 | 4.85E-52 | -1.69E-46 |
| MS.gene053726 | MS.gene27997 | 0.873551 | 1.35E-67 | -1.69E-46 |
| MS.gene053879 | MS.gene27997 | 0.826493 | 2.63E-54 | -1.69E-46 |
| MS.gene053931 | MS.gene27997 | 0.844857 | 5.83E-59 | -1.69E-46 |
| MS.gene053963 | MS.gene27997 | 0.80527 | 1.45E-49 | -1.69E-46 |
| MS.gene054004 | MS.gene27997 | 0.812585 | 3.94E-51 | -1.69E-46 |
| MS.gene054178 | MS.gene27997 | 0.819367 | 1.21E-52 | -1.69E-46 |
| MS.gene05439 | MS.gene27997 | 0.811972 | 5.36E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene27997 | 0.848117 | 7.52E-60 | -1.69E-46 |
| MS.gene05458 | MS.gene27997 | 0.807866 | 4.10E-50 | -1.69E-46 |
| MS.gene054641 | MS.gene27997 | 0.834059 | 3.73E-56 | -1.69E-46 |
| MS.gene054651 | MS.gene27997 | 0.845842 | 3.16E-59 | -1.69E-46 |
| MS.gene054709 | MS.gene27997 | 0.816322 | 5.87E-52 | -1.69E-46 |
| MS.gene054892 | MS.gene27997 | 0.894057 | 3.53E-75 | -1.69E-46 |
| MS.gene054893 | MS.gene27997 | 0.905266 | 5.15E-80 | -1.69E-46 |
| MS.gene054957 | MS.gene27997 | 0.83492 | 2.27E-56 | -1.69E-46 |
| MS.gene055150 | MS.gene27997 | 0.834332 | 3.19E-56 | -1.69E-46 |
| MS.gene05517 | MS.gene27997 | 0.802954 | 4.39E-49 | -1.69E-46 |
| MS.gene055222 | MS.gene27997 | 0.808064 | 3.72E-50 | -1.69E-46 |
| MS.gene055386 | MS.gene27997 | 0.803809 | 2.92E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene27997 | 0.845579 | 3.72E-59 | -1.69E-46 |
| MS.gene055724 | MS.gene27997 | 0.817814 | 2.71E-52 | -1.69E-46 |
| MS.gene055841 | MS.gene27997 | 0.825178 | 5.40E-54 | -1.69E-46 |
| MS.gene055864 | MS.gene27997 | 0.84197 | 3.44E-58 | -1.69E-46 |
| MS.gene056045 | MS.gene27997 | 0.84515 | 4.86E-59 | -1.69E-46 |
| MS.gene056174 | MS.gene27997 | 0.811011 | 8.67E-51 | -1.69E-46 |
| MS.gene056181 | MS.gene27997 | 0.815164 | 1.06E-51 | -1.69E-46 |
| MS.gene056363 | MS.gene27997 | 0.817132 | 3.86E-52 | -1.69E-46 |
| MS.gene056480 | MS.gene27997 | 0.801884 | 7.29E-49 | -1.69E-46 |
| MS.gene056519 | MS.gene27997 | 0.803787 | 2.95E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene27997 | 0.873906 | 1.02E-67 | -1.69E-46 |
| MS.gene056776 | MS.gene27997 | 0.814355 | 1.61E-51 | -1.69E-46 |
| MS.gene056779 | MS.gene27997 | 0.800263 | 1.56E-48 | -1.69E-46 |
| MS.gene056787 | MS.gene27997 | 0.811288 | 7.55E-51 | -1.69E-46 |
| MS.gene056831 | MS.gene27997 | 0.828461 | 8.88E-55 | -1.69E-46 |
| MS.gene056834 | MS.gene27997 | 0.806098 | 9.70E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene27997 | 0.856285 | 3.57E-62 | -1.69E-46 |
| MS.gene05690 | MS.gene27997 | 0.81606 | 6.72E-52 | -1.69E-46 |
| MS.gene056973 | MS.gene27997 | 0.826043 | 3.37E-54 | -1.69E-46 |
| MS.gene056986 | MS.gene27997 | 0.810817 | 9.55E-51 | -1.69E-46 |
| MS.gene057034 | MS.gene27997 | 0.83304 | 6.70E-56 | -1.69E-46 |
| MS.gene057102 | MS.gene27997 | 0.844767 | 6.17E-59 | -1.69E-46 |
| MS.gene057155 | MS.gene27997 | 0.832991 | 6.89E-56 | -1.69E-46 |
| MS.gene057174 | MS.gene27997 | 0.858835 | 6.27E-63 | -1.69E-46 |
| MS.gene057208 | MS.gene27997 | 0.853635 | 2.10E-61 | -1.69E-46 |
| MS.gene057371 | MS.gene27997 | 0.83067 | 2.58E-55 | -1.69E-46 |
| MS.gene057622 | MS.gene27997 | 0.843059 | 1.77E-58 | -1.69E-46 |
| MS.gene057855 | MS.gene27997 | 0.80645 | 8.18E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene27997 | 0.812602 | 3.90E-51 | -1.69E-46 |
| MS.gene058008 | MS.gene27997 | 0.836054 | 1.17E-56 | -1.69E-46 |
| MS.gene058009 | MS.gene27997 | 0.831438 | 1.67E-55 | -1.69E-46 |
| MS.gene058010 | MS.gene27997 | 0.83597 | 1.23E-56 | -1.69E-46 |
| MS.gene058081 | MS.gene27997 | 0.836507 | 8.98E-57 | -1.69E-46 |
| MS.gene058095 | MS.gene27997 | 0.851427 | 8.94E-61 | -1.69E-46 |
| MS.gene058159 | MS.gene27997 | 0.846122 | 2.65E-59 | -1.69E-46 |
| MS.gene058292 | MS.gene27997 | 0.848591 | 5.56E-60 | -1.69E-46 |
| MS.gene058427 | MS.gene27997 | 0.807619 | 4.63E-50 | -1.69E-46 |
| MS.gene058429 | MS.gene27997 | 0.846552 | 2.02E-59 | -1.69E-46 |
| MS.gene058592 | MS.gene27997 | 0.839381 | 1.64E-57 | -1.69E-46 |
| MS.gene058781 | MS.gene27997 | 0.881524 | 2.23E-70 | -1.69E-46 |
| MS.gene058783 | MS.gene27997 | 0.862123 | 6.33E-64 | -1.69E-46 |
| MS.gene05878 | MS.gene27997 | 0.835906 | 1.28E-56 | -1.69E-46 |
| MS.gene05897 | MS.gene27997 | 0.808928 | 2.43E-50 | -1.69E-46 |
| MS.gene059007 | MS.gene27997 | 0.81862 | 1.78E-52 | -1.69E-46 |
| MS.gene059146 | MS.gene27997 | 0.838318 | 3.09E-57 | -1.69E-46 |
| MS.gene059170 | MS.gene27997 | 0.827504 | 1.51E-54 | -1.69E-46 |
| MS.gene059283 | MS.gene27997 | 0.826874 | 2.14E-54 | -1.69E-46 |
| MS.gene05952 | MS.gene27997 | 0.862924 | 3.59E-64 | -1.69E-46 |
| MS.gene05956 | MS.gene27997 | 0.809221 | 2.11E-50 | -1.69E-46 |
| MS.gene05985 | MS.gene27997 | -0.852572 | 4.23E-61 | -1.69E-46 |
| MS.gene059901 | MS.gene27997 | -0.81289 | 3.38E-51 | -1.69E-46 |
| MS.gene059965 | MS.gene27997 | 0.804477 | 2.12E-49 | -1.69E-46 |
| MS.gene060085 | MS.gene27997 | 0.826616 | 2.46E-54 | -1.69E-46 |
| MS.gene060244 | MS.gene27997 | 0.82847 | 8.83E-55 | -1.69E-46 |
| MS.gene060259 | MS.gene27997 | 0.854035 | 1.61E-61 | -1.69E-46 |
| MS.gene060412 | MS.gene27997 | 0.803323 | 3.68E-49 | -1.69E-46 |
| MS.gene060413 | MS.gene27997 | 0.81241 | 4.30E-51 | -1.69E-46 |
| MS.gene060435 | MS.gene27997 | 0.840193 | 1.01E-57 | -1.69E-46 |
| MS.gene060522 | MS.gene27997 | 0.852979 | 3.23E-61 | -1.69E-46 |
| MS.gene060527 | MS.gene27997 | 0.819014 | 1.45E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene27997 | 0.804738 | 1.87E-49 | -1.69E-46 |
| MS.gene060777 | MS.gene27997 | 0.827826 | 1.26E-54 | -1.69E-46 |
| MS.gene060785 | MS.gene27997 | 0.824651 | 7.19E-54 | -1.69E-46 |
| MS.gene060840 | MS.gene27997 | 0.814238 | 1.71E-51 | -1.69E-46 |
| MS.gene060850 | MS.gene27997 | 0.840001 | 1.13E-57 | -1.69E-46 |
| MS.gene060851 | MS.gene27997 | 0.83945 | 1.57E-57 | -1.69E-46 |
| MS.gene060852 | MS.gene27997 | 0.837559 | 4.84E-57 | -1.69E-46 |
| MS.gene060932 | MS.gene27997 | 0.875785 | 2.34E-68 | -1.69E-46 |
| MS.gene060933 | MS.gene27997 | 0.884416 | 1.95E-71 | -1.69E-46 |
| MS.gene060935 | MS.gene27997 | 0.889989 | 1.48E-73 | -1.69E-46 |
| MS.gene060937 | MS.gene27997 | 0.898338 | 5.85E-77 | -1.69E-46 |
| MS.gene061100 | MS.gene27997 | 0.858909 | 5.96E-63 | -1.69E-46 |
| MS.gene061160 | MS.gene27997 | 0.827566 | 1.46E-54 | -1.69E-46 |
| MS.gene061188 | MS.gene27997 | 0.827467 | 1.54E-54 | -1.69E-46 |
| MS.gene06121 | MS.gene27997 | 0.824784 | 6.69E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene27997 | MS.gene040107 | PPI |
| MS.gene27997 | MS.gene75708 | PPI |
| MS.gene27997 | MS.gene77496 | PPI |
| MS.gene27997 | MS.gene047041 | PPI |
| MS.gene27997 | MS.gene79861 | PPI |
| MS.gene27997 | MS.gene047008 | PPI |
| MS.gene045393 | MS.gene27997 | PPI |
| MS.gene93746 | MS.gene27997 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27997.t1 | MTR_8g089685 | 98.185 | 661 | 12 | 0 | 1 | 661 | 1 | 661 | 0.0 | 1298 |
| MS.gene27997.t1 | MTR_8g089685 | 97.794 | 544 | 12 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1055 |
| MS.gene27997.t1 | MTR_8g089685 | 97.240 | 471 | 13 | 0 | 1 | 471 | 1 | 471 | 0.0 | 911 |
| MS.gene27997.t1 | MTR_1g100880 | 36.039 | 308 | 181 | 4 | 334 | 630 | 125 | 427 | 1.80e-38 | 148 |
| MS.gene27997.t1 | MTR_5g045350 | 57.426 | 101 | 12 | 3 | 474 | 558 | 34 | 119 | 1.29e-21 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27997.t1 | AT1G24560 | 56.094 | 681 | 272 | 10 | 4 | 661 | 2 | 678 | 0.0 | 664 |
| MS.gene27997.t1 | AT3G49055 | 34.295 | 312 | 179 | 8 | 333 | 631 | 155 | 453 | 1.70e-22 | 101 |
Find 157 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAGGTTTCTGAGAGTTTA+AGG | 0.165822 | 4.4:-11646742 | MS.gene27997:CDS |
| ACTGGAATTGAGAAGATTTC+TGG | 0.197534 | 4.4:-11647076 | MS.gene27997:CDS |
| GAAGGAGTTTGTTAATAATT+TGG | 0.197675 | 4.4:-11646693 | MS.gene27997:CDS |
| TTCAAATTTAGTAAGATTCT+TGG | 0.227068 | 4.4:-11646251 | MS.gene27997:CDS |
| CATTCTATGGTCGAGTTCTT+TGG | 0.227216 | 4.4:+11645750 | None:intergenic |
| TCTGGTAAGGTGAATGGTTT+TGG | 0.265573 | 4.4:-11647058 | MS.gene27997:CDS |
| GACTTCATTCAACCGATTAA+AGG | 0.284071 | 4.4:-11647278 | MS.gene27997:CDS |
| AACTGCAGCCGTTGAGGGTT+TGG | 0.288903 | 4.4:-11646798 | MS.gene27997:CDS |
| CCTCCACCCGGTGCATTCTA+TGG | 0.302232 | 4.4:+11645737 | None:intergenic |
| CGTTGATGATGCTGGTTATT+CGG | 0.311068 | 4.4:-11646579 | MS.gene27997:CDS |
| GGAGAGGGATTTGGTTGTTA+AGG | 0.312356 | 4.4:-11646777 | MS.gene27997:CDS |
| CACTGTGCAGGCTGGTGCTT+TGG | 0.313975 | 4.4:-11646050 | MS.gene27997:intron |
| AGATTTCTCTGCTGCATCTC+TGG | 0.331404 | 4.4:+11643450 | None:intergenic |
| AAGACTTGAGGGGCCGAAAT+AGG | 0.339224 | 4.4:-11643342 | MS.gene27997:CDS |
| GAGTGAGGGTTTGCAGTTGA+AGG | 0.339449 | 4.4:-11646711 | MS.gene27997:CDS |
| TGCTGCATCTCTGGCTGCCA+TGG | 0.341080 | 4.4:+11643459 | None:intergenic |
| GAATTTGATGTGATCGGAAT+TGG | 0.344001 | 4.4:+11647409 | None:intergenic |
| TGAAGTCTGTAACTCCGTTT+TGG | 0.347141 | 4.4:+11647294 | None:intergenic |
| AATGTACGCGCCTCTTTGGC+TGG | 0.351712 | 4.4:-11646509 | MS.gene27997:CDS |
| GTTAAGGAAAAGGATCAAAT+TGG | 0.357356 | 4.4:-11646377 | MS.gene27997:CDS |
| TGAGGGTTTGGAGAGGGATT+TGG | 0.360266 | 4.4:-11646786 | MS.gene27997:CDS |
| TCGAGTCATATGATGGTTAC+TGG | 0.361394 | 4.4:-11647094 | MS.gene27997:CDS |
| CTTGAGCAAGCACCTTTAAT+CGG | 0.365333 | 4.4:+11647266 | None:intergenic |
| GGTTGCGTGATGATGCTGTT+AGG | 0.370427 | 4.4:-11647213 | MS.gene27997:CDS |
| TATGGTCGAGTTCTTTGGCC+TGG | 0.370910 | 4.4:+11645755 | None:intergenic |
| ATACATATCTAGGCCTATTT+CGG | 0.371352 | 4.4:+11643329 | None:intergenic |
| CAAGAAGCTGCTGCAGGCAC+AGG | 0.383789 | 4.4:-11645426 | MS.gene27997:CDS |
| TGAGAATGTACGCGCCTCTT+TGG | 0.389318 | 4.4:-11646513 | MS.gene27997:CDS |
| AGCACACTGTGAATGAATTA+AGG | 0.395713 | 4.4:-11645985 | MS.gene27997:intron |
| TAATAATTTGGAATCAAAGA+TGG | 0.396116 | 4.4:-11646681 | MS.gene27997:CDS |
| ATCAAATTGGTTCTTTGCTT+AGG | 0.398406 | 4.4:-11646364 | MS.gene27997:CDS |
| GGTATGGCTGCGGTGACTTA+TGG | 0.401013 | 4.4:-11646995 | MS.gene27997:CDS |
| ATACGGAAGCGCGATGAATT+CGG | 0.405883 | 4.4:-11647238 | MS.gene27997:CDS |
| CATGGCCAGCATACATATCT+AGG | 0.407682 | 4.4:+11643319 | None:intergenic |
| GAATTATGAGATTGCTATTG+AGG | 0.413784 | 4.4:-11646873 | MS.gene27997:CDS |
| TCTTATAAACACTACAAATC+TGG | 0.419248 | 4.4:+11646603 | None:intergenic |
| AGAAACTGCGAGGCAATTAG+AGG | 0.421139 | 4.4:-11647161 | MS.gene27997:CDS |
| AAGATTTCTGGTAAGGTGAA+TGG | 0.421879 | 4.4:-11647064 | MS.gene27997:CDS |
| TGGCTCGGCATGGACTTTGT+TGG | 0.426457 | 4.4:-11643292 | MS.gene27997:CDS |
| ATGCTATTCAATTAAATGTC+CGG | 0.428651 | 4.4:-11647490 | None:intergenic |
| GCTTTCTGAGTCGTTGTTTG+TGG | 0.428931 | 4.4:-11646555 | MS.gene27997:CDS |
| TGCTTTGGAGGATGTTGTTA+AGG | 0.434993 | 4.4:-11646035 | MS.gene27997:CDS |
| GACTGTGAATAGGTTAGTTA+AGG | 0.436099 | 4.4:-11646393 | MS.gene27997:CDS |
| TGTGCAGGCTGGTGCTTTGG+AGG | 0.442489 | 4.4:-11646047 | MS.gene27997:intron |
| TTTAAGGAAGGAAGAGAGTG+AGG | 0.442980 | 4.4:-11646726 | MS.gene27997:CDS |
| GAAAATGGGTTGAGGGAGGT+TGG | 0.445747 | 4.4:-11646281 | MS.gene27997:CDS |
| GTTGTTTGTGGCGCAAGAAA+CGG | 0.448855 | 4.4:-11646543 | MS.gene27997:CDS |
| TGAGAACAGAGAAGACTTGA+GGG | 0.449088 | 4.4:-11643353 | MS.gene27997:CDS |
| ATGGTCGAGTTCTTTGGCCT+GGG | 0.450706 | 4.4:+11645756 | None:intergenic |
| TGCGAGGCAATTAGAGGAAT+CGG | 0.452953 | 4.4:-11647155 | MS.gene27997:CDS |
| CTCTTTATAATGCAGATTGA+GGG | 0.453284 | 4.4:-11645510 | MS.gene27997:intron |
| TAACAGCATCATCACGCAAC+CGG | 0.459925 | 4.4:+11647215 | None:intergenic |
| GACTGATACGCAACAGCAAA+CGG | 0.460239 | 4.4:-11643257 | MS.gene27997:CDS |
| ACAGAATGATGCAAGTGTTA+AGG | 0.465407 | 4.4:-11646930 | MS.gene27997:CDS |
| CACATCAAATTCACCTTCAC+AGG | 0.466563 | 4.4:-11647398 | MS.gene27997:CDS |
| TTTAGTAAGATTCTTGGAGA+TGG | 0.466672 | 4.4:-11646245 | MS.gene27997:CDS |
| TCCCAATTATAAGAGAGGTT+CGG | 0.467159 | 4.4:+11643213 | None:intergenic |
| GCAAACGGCTTCTAACGAAA+TGG | 0.471284 | 4.4:-11643242 | MS.gene27997:CDS |
| TGCTATTGAGGTTTCGCAGT+TGG | 0.472675 | 4.4:-11646861 | MS.gene27997:CDS |
| AGCGGCAGAAAATGGGTTGA+GGG | 0.474191 | 4.4:-11646288 | MS.gene27997:CDS |
| GGCATCTAAGTCGCCGGCGC+CGG | 0.475732 | 4.4:+11647471 | None:intergenic |
| AAAAGTTAGGGATGTGGTGG+AGG | 0.477729 | 4.4:-11646447 | MS.gene27997:CDS |
| GCAGAGCAAGAAGCTGCTGC+AGG | 0.479033 | 4.4:-11645432 | MS.gene27997:CDS |
| TTCAATTAAATGTCCGGCGC+CGG | 0.481437 | 4.4:-11647484 | None:intergenic |
| GATTCTCGCCGAGCTTGATC+AGG | 0.482851 | 4.4:-11647347 | MS.gene27997:CDS |
| CGGCGACTTAGATGCCGATT+CGG | 0.483746 | 4.4:-11647464 | MS.gene27997:CDS |
| GTTTAGATGAGACTGTGAAT+AGG | 0.488303 | 4.4:-11646403 | MS.gene27997:CDS |
| TTAAGGAAGGAAGAGAGTGA+GGG | 0.489133 | 4.4:-11646725 | MS.gene27997:CDS |
| CGCCGCCGAGAAAGCCAAAA+CGG | 0.489160 | 4.4:-11647308 | MS.gene27997:CDS |
| AAGAAAACTGCAGCCGTTGA+GGG | 0.489646 | 4.4:-11646803 | MS.gene27997:CDS |
| GAATTCATCGCGCTTCCGTA+TGG | 0.491635 | 4.4:+11647240 | None:intergenic |
| AGAGACAGCAGCTGCTGCCA+TGG | 0.494691 | 4.4:-11643476 | MS.gene27997:CDS |
| CAACTCATTTGAAGACGGAT+TGG | 0.497391 | 4.4:+11646316 | None:intergenic |
| TGCTGGCCATGGCAGTGGCT+CGG | 0.499416 | 4.4:-11643307 | MS.gene27997:CDS |
| TTAAGGCTAGGGATCAAGCT+AGG | 0.500217 | 4.4:-11646913 | MS.gene27997:CDS |
| GCCATGGCAGTGGCTCGGCA+TGG | 0.506711 | 4.4:-11643302 | MS.gene27997:CDS |
| ACTTGAGGTCTTCTAGACTA+AGG | 0.506773 | 4.4:-11643414 | MS.gene27997:CDS |
| ACGCGCCTCTTTGGCTGGGA+TGG | 0.508680 | 4.4:-11646504 | MS.gene27997:CDS |
| AATTGAGAAGATTTCTGGTA+AGG | 0.512747 | 4.4:-11647071 | MS.gene27997:CDS |
| GGTTTCTGAGAGTTTAAGGA+AGG | 0.515527 | 4.4:-11646738 | MS.gene27997:CDS |
| TGAACAGCAATTTGTGGCAC+AGG | 0.518504 | 4.4:-11645400 | MS.gene27997:intron |
| GAATAGGTTAGTTAAGGAAA+AGG | 0.519027 | 4.4:-11646387 | MS.gene27997:CDS |
| GCAGATTGAGGGGCTAATGA+TGG | 0.523203 | 4.4:-11645499 | MS.gene27997:intron |
| ATGTACGCGCCTCTTTGGCT+GGG | 0.523765 | 4.4:-11646508 | MS.gene27997:CDS |
| AGAGGATGAAATATACACTT+TGG | 0.525090 | 4.4:-11646174 | MS.gene27997:intron |
| TAGCGGCAGAAAATGGGTTG+AGG | 0.529571 | 4.4:-11646289 | MS.gene27997:CDS |
| TATAAGATCGTTGATGATGC+TGG | 0.530224 | 4.4:-11646587 | MS.gene27997:CDS |
| AGCCGTTGAGGGTTTGGAGA+GGG | 0.534744 | 4.4:-11646792 | MS.gene27997:CDS |
| GTTGCGTGATGATGCTGTTA+GGG | 0.539375 | 4.4:-11647212 | MS.gene27997:CDS |
| TCTCTTCAAGTTCCTCCACC+CGG | 0.540700 | 4.4:+11645725 | None:intergenic |
| CCATAGAATGCACCGGGTGG+AGG | 0.541339 | 4.4:-11645737 | MS.gene27997:CDS |
| ATCCCTCTCCAAACCCTCAA+CGG | 0.544511 | 4.4:+11646790 | None:intergenic |
| GAAATATACCGGTATGGCTG+CGG | 0.544973 | 4.4:-11647005 | MS.gene27997:CDS |
| GAAGAAAACTGCAGCCGTTG+AGG | 0.546363 | 4.4:-11646804 | MS.gene27997:CDS |
| GAGTGCTTTGTCAAAGAGGA+TGG | 0.550359 | 4.4:-11646342 | MS.gene27997:CDS |
| AGGTGTTGAACAGCAATTTG+TGG | 0.550763 | 4.4:-11645406 | MS.gene27997:CDS |
| ATGATGCAAGTGTTAAGGCT+AGG | 0.551573 | 4.4:-11646925 | MS.gene27997:CDS |
| TGATGCAAGTGTTAAGGCTA+GGG | 0.553468 | 4.4:-11646924 | MS.gene27997:CDS |
| TAAGGATGAGAAGTTGAATG+AGG | 0.556456 | 4.4:-11646759 | MS.gene27997:CDS |
| GACGTCGCTGAGCACCGAAT+CGG | 0.557895 | 4.4:+11647450 | None:intergenic |
| GCAGTTGTCAACGCTCAAGC+AGG | 0.558280 | 4.4:-11643557 | MS.gene27997:intron |
| TTAGGAGTGCTTTGTCAAAG+AGG | 0.560450 | 4.4:-11646346 | MS.gene27997:CDS |
| TTGAGAACAGAGAAGACTTG+AGG | 0.560542 | 4.4:-11643354 | MS.gene27997:CDS |
| TGCTGTTAGGGAGAAGGAAG+AGG | 0.562775 | 4.4:-11647200 | MS.gene27997:CDS |
| TCACAGTCTCATCTAAACTC+TGG | 0.562920 | 4.4:+11646408 | None:intergenic |
| CTTGAGGTCTTCTAGACTAA+GGG | 0.563951 | 4.4:-11643413 | MS.gene27997:CDS |
| CTAGATATGTATGCTGGCCA+TGG | 0.566839 | 4.4:-11643318 | MS.gene27997:CDS |
| GTCGCAGAAATATACCGGTA+TGG | 0.569668 | 4.4:-11647011 | MS.gene27997:CDS |
| TGAGAAATCGAGTCATATGA+TGG | 0.570001 | 4.4:-11647101 | MS.gene27997:CDS |
| TAAGCAGCACATAGAAGCCC+AGG | 0.570404 | 4.4:-11645773 | MS.gene27997:CDS |
| AAATTTCCCAATTATAAGAG+AGG | 0.571808 | 4.4:+11643208 | None:intergenic |
| ATGTATGCTGGCCATGGCAG+TGG | 0.573801 | 4.4:-11643312 | MS.gene27997:CDS |
| CCGGTATATTTCTGCGACCG+CGG | 0.574878 | 4.4:+11647016 | None:intergenic |
| AACTCGACCATAGAATGCAC+CGG | 0.575532 | 4.4:-11645744 | MS.gene27997:CDS |
| TGCTTGCTCAAGAAGCCATA+CGG | 0.576060 | 4.4:-11647255 | MS.gene27997:CDS |
| CGAATCGGCATCTAAGTCGC+CGG | 0.577434 | 4.4:+11647465 | None:intergenic |
| TGATGTGATCGGAATTGGAT+CGG | 0.580529 | 4.4:+11647414 | None:intergenic |
| CTGAAGAAGAAATTAACAGA+TGG | 0.583950 | 4.4:-11645464 | MS.gene27997:CDS |
| TATTAGTGATTTGAGAGATG+AGG | 0.584521 | 4.4:-11646831 | MS.gene27997:CDS |
| CAAGCTCGGCGAGAATCTCA+CGG | 0.585055 | 4.4:+11647353 | None:intergenic |
| ATAGGCCTAGATATGTATGC+TGG | 0.587227 | 4.4:-11643324 | MS.gene27997:CDS |
| ATAAGTCACCGCAGCCATAC+CGG | 0.588731 | 4.4:+11646997 | None:intergenic |
| TAGAGGAATCGGCGAAGGAG+CGG | 0.590365 | 4.4:-11647144 | MS.gene27997:CDS |
| CCGCGGTCGCAGAAATATAC+CGG | 0.590801 | 4.4:-11647016 | MS.gene27997:CDS |
| CTCTCAAGTTAGCAGACTTG+AGG | 0.593940 | 4.4:-11643429 | MS.gene27997:CDS |
| AATCTATACATGAGTTGACT+AGG | 0.596241 | 4.4:-11646481 | MS.gene27997:CDS |
| GGTGGAGGAACTTGAAGAGA+AGG | 0.596408 | 4.4:-11645722 | MS.gene27997:CDS |
| GCAATTAGAGGAATCGGCGA+AGG | 0.598822 | 4.4:-11647149 | MS.gene27997:CDS |
| TCCATGCCGAGCCACTGCCA+TGG | 0.602713 | 4.4:+11643301 | None:intergenic |
| AGAGGCAAAGCAATCCATGT+TGG | 0.607377 | 4.4:-11643527 | MS.gene27997:CDS |
| ACTTGAAGAGAAGGAAAGAG+TGG | 0.609943 | 4.4:-11645713 | MS.gene27997:CDS |
| TTCAACTGATCAATCAACAA+AGG | 0.612891 | 4.4:+11646647 | None:intergenic |
| TCTTTATAATGCAGATTGAG+GGG | 0.613990 | 4.4:-11645509 | MS.gene27997:intron |
| GGAGCGGCAAGGATTACGAT+CGG | 0.614644 | 4.4:-11647128 | MS.gene27997:CDS |
| GCTCAAGCAGGAACTTGAAG+AGG | 0.618199 | 4.4:-11643545 | MS.gene27997:CDS |
| CTCAGCGACGTCGAGGACGA+CGG | 0.618536 | 4.4:-11647439 | MS.gene27997:CDS |
| TTCGGTGCTCAGCGACGTCG+AGG | 0.625351 | 4.4:-11647446 | MS.gene27997:CDS |
| GAAGGTGAATTTGATGTGAT+CGG | 0.630779 | 4.4:+11647403 | None:intergenic |
| ACGGAGACTTCATCCTGTGA+AGG | 0.633111 | 4.4:+11647385 | None:intergenic |
| TAAGGCTAGGGATCAAGCTA+GGG | 0.634167 | 4.4:-11646912 | MS.gene27997:CDS |
| TGATGATGCTGTTAGGGAGA+AGG | 0.635078 | 4.4:-11647206 | MS.gene27997:CDS |
| AGATTCCATCCCAGCCAAAG+AGG | 0.642943 | 4.4:+11646499 | None:intergenic |
| CAGCCGTTGAGGGTTTGGAG+AGG | 0.644245 | 4.4:-11646793 | MS.gene27997:CDS |
| TTTCTTCTCAGATTCCAACA+TGG | 0.645960 | 4.4:+11643513 | None:intergenic |
| GGAAGCGCGATGAATTCGGC+CGG | 0.645981 | 4.4:-11647234 | MS.gene27997:CDS |
| GAATCGGCGAAGGAGCGGCA+AGG | 0.647315 | 4.4:-11647139 | MS.gene27997:CDS |
| GAAGTGGAAGCGCTTTGCCG+CGG | 0.652202 | 4.4:-11647033 | MS.gene27997:CDS |
| GGCAGAAAATGGGTTGAGGG+AGG | 0.653218 | 4.4:-11646285 | MS.gene27997:CDS |
| ACTCGACCATAGAATGCACC+GGG | 0.661588 | 4.4:-11645743 | MS.gene27997:CDS |
| TTCTAGACTAAGGGACAGAG+TGG | 0.663047 | 4.4:-11643404 | MS.gene27997:CDS |
| GAGAACAGAGAAGACTTGAG+GGG | 0.677822 | 4.4:-11643352 | MS.gene27997:CDS |
| GGGGCTAATGATGGACATTG+CGG | 0.692078 | 4.4:-11645490 | MS.gene27997:CDS |
| CGACCATAGAATGCACCGGG+TGG | 0.695799 | 4.4:-11645740 | MS.gene27997:CDS |
| AATCAAAGATGGAATCGTTG+AGG | 0.695950 | 4.4:-11646670 | MS.gene27997:CDS |
| AGCTTCTAGAAGAAACTGCG+AGG | 0.719282 | 4.4:-11647171 | MS.gene27997:CDS |
| CTAGGGAACAGATTGAACAG+AGG | 0.728016 | 4.4:-11646895 | MS.gene27997:CDS |
| ACTTTGTTGGAATTCAGCAG+CGG | 0.730616 | 4.4:-11643279 | MS.gene27997:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTATTTATTGGCAATT+TGG | - | chr4.4:11645472-11645491 | MS.gene27997:CDS | 15.0% |
| !!! | TACATTTTTTCCATTATTTT+TGG | - | chr4.4:11646932-11646951 | MS.gene27997:CDS | 15.0% |
| !!! | TGGTTCATTTAATTTTTTTA+TGG | + | chr4.4:11646550-11646569 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTATTTATCTTTC+TGG | - | chr4.4:11644550-11644569 | MS.gene27997:intron | 15.0% |
| !! | AAATGACAAGTCAAAAAAAA+CGG | - | chr4.4:11644487-11644506 | MS.gene27997:intron | 20.0% |
| !! | ATTTACAGAAGAAATAATTC+TGG | + | chr4.4:11645672-11645691 | None:intergenic | 20.0% |
| !! | CAGTGTATATTCTAAATTAA+CGG | + | chr4.4:11645550-11645569 | None:intergenic | 20.0% |
| !! | TTCAAATTTAGTAAGATTCT+TGG | - | chr4.4:11644443-11644462 | MS.gene27997:intron | 20.0% |
| !!! | AAGTGCACATTTTTATTTAT+TGG | - | chr4.4:11645464-11645483 | MS.gene27997:CDS | 20.0% |
| !!! | AATTTATAGTTTTTAAGCCA+AGG | + | chr4.4:11645855-11645874 | None:intergenic | 20.0% |
| !!! | ATTTTTCAAGTGTCATATTA+AGG | - | chr4.4:11646510-11646529 | MS.gene27997:CDS | 20.0% |
| !!! | TAATAATTTGGAATCAAAGA+TGG | - | chr4.4:11644013-11644032 | MS.gene27997:intron | 20.0% |
| ! | AAAAACAACTCATTTGAAGA+CGG | + | chr4.4:11644386-11644405 | None:intergenic | 25.0% |
| ! | ACACCGAAATTATATTTATC+TGG | - | chr4.4:11645763-11645782 | MS.gene27997:CDS | 25.0% |
| ! | AGAAAAAAAAATCACAACGT+CGG | + | chr4.4:11644857-11644876 | None:intergenic | 25.0% |
| ! | AGATAAATATAATTTCGGTG+TGG | + | chr4.4:11645764-11645783 | None:intergenic | 25.0% |
| ! | ATATTTGCTTAACTCCATTA+AGG | - | chr4.4:11644881-11644900 | MS.gene27997:intron | 25.0% |
| ! | GAACATAAGAGTTTATGTTT+GGG | - | chr4.4:11646627-11646646 | MS.gene27997:CDS | 25.0% |
| ! | GCTCCAGATAAATATAATTT+CGG | + | chr4.4:11645769-11645788 | None:intergenic | 25.0% |
| ! | GTAAGTACACAAATTATCAA+TGG | + | chr4.4:11646418-11646437 | None:intergenic | 25.0% |
| ! | TATTTGCTTAACTCCATTAA+GGG | - | chr4.4:11644882-11644901 | MS.gene27997:intron | 25.0% |
| ! | TCATAATATCCATTAACAGA+TGG | + | chr4.4:11647056-11647075 | None:intergenic | 25.0% |
| ! | TCTTATAAACACTACAAATC+TGG | + | chr4.4:11644094-11644113 | None:intergenic | 25.0% |
| ! | TGAACATAAGAGTTTATGTT+TGG | - | chr4.4:11646626-11646645 | MS.gene27997:CDS | 25.0% |
| ! | TGCAACAAGTATTTATGATT+AGG | + | chr4.4:11647112-11647131 | None:intergenic | 25.0% |
| !! | CGTTAATTTAGAATATACAC+TGG | - | chr4.4:11645548-11645567 | MS.gene27997:intron | 25.0% |
| !! | GATTGTTGTTCAAAAAGTTA+GGG | - | chr4.4:11644235-11644254 | MS.gene27997:intron | 25.0% |
| !! | TTGATAATTTGTGTACTTAC+TGG | - | chr4.4:11646418-11646437 | MS.gene27997:CDS | 25.0% |
| !!! | AGAGTTTAGACTTTTAGTTT+TGG | - | chr4.4:11646853-11646872 | MS.gene27997:CDS | 25.0% |
| !!! | CTTAGAGTAATGTTTGTTAT+CGG | - | chr4.4:11646827-11646846 | MS.gene27997:CDS | 25.0% |
| !!! | GAAGGAGTTTGTTAATAATT+TGG | - | chr4.4:11644001-11644020 | MS.gene27997:intron | 25.0% |
| !!! | TTCAAATGAGTTGTTTTTAG+CGG | - | chr4.4:11644388-11644407 | MS.gene27997:intron | 25.0% |
| !!! | TTTGCTATTTGTCTAACTTT+GGG | - | chr4.4:11644762-11644781 | MS.gene27997:intron | 25.0% |
| !!! | TTTTACAAGTTTGCTATGTT+TGG | - | chr4.4:11645349-11645368 | MS.gene27997:intron | 25.0% |
| AAAAACGGAAAAAGAAGAAG+AGG | - | chr4.4:11644502-11644521 | MS.gene27997:intron | 30.0% | |
| AAACCATCTAAAAAATCTGC+AGG | + | chr4.4:11645927-11645946 | None:intergenic | 30.0% | |
| AACAATTAGAAGCTTAAGCT+TGG | + | chr4.4:11646570-11646589 | None:intergenic | 30.0% | |
| AACCATCTAAAAAATCTGCA+GGG | + | chr4.4:11645926-11645945 | None:intergenic | 30.0% | |
| AACTAATTAGGCTGTAAATC+TGG | - | chr4.4:11646997-11647016 | MS.gene27997:CDS | 30.0% | |
| AATTTGTAAGTTGCAGTTGA+TGG | - | chr4.4:11645388-11645407 | MS.gene27997:intron | 30.0% | |
| AGAGGATGAAATATACACTT+TGG | - | chr4.4:11644520-11644539 | MS.gene27997:intron | 30.0% | |
| AGTTCATAGTTCATACTCAA+GGG | - | chr4.4:11646168-11646187 | MS.gene27997:intron | 30.0% | |
| ATACATATCTAGGCCTATTT+CGG | + | chr4.4:11647368-11647387 | None:intergenic | 30.0% | |
| ATATGATCCCTTAATTGTGA+AGG | - | chr4.4:11645045-11645064 | MS.gene27997:intron | 30.0% | |
| CGATAACAAACATTACTCTA+AGG | + | chr4.4:11646829-11646848 | None:intergenic | 30.0% | |
| CTCTTTATAATGCAGATTGA+GGG | - | chr4.4:11645184-11645203 | MS.gene27997:intron | 30.0% | |
| CTGAAGAAGAAATTAACAGA+TGG | - | chr4.4:11645230-11645249 | MS.gene27997:intron | 30.0% | |
| CTGAATGAGTTATTCAAGTA+TGG | - | chr4.4:11646333-11646352 | MS.gene27997:CDS | 30.0% | |
| GACAAAACCTTCACAATTAA+GGG | + | chr4.4:11645055-11645074 | None:intergenic | 30.0% | |
| GACACTTGAAAAATGAAGTT+GGG | + | chr4.4:11646504-11646523 | None:intergenic | 30.0% | |
| GTTAAGGAAAAGGATCAAAT+TGG | - | chr4.4:11644317-11644336 | MS.gene27997:intron | 30.0% | |
| TACACTGGAATATGTGTATA+TGG | + | chr4.4:11645712-11645731 | None:intergenic | 30.0% | |
| TACTGAAGAACTTACATCTT+TGG | - | chr4.4:11644817-11644836 | MS.gene27997:intron | 30.0% | |
| TACTTTAAGCCATCTGTTAA+TGG | - | chr4.4:11647044-11647063 | MS.gene27997:CDS | 30.0% | |
| TATTAGTGATTTGAGAGATG+AGG | - | chr4.4:11643863-11643882 | MS.gene27997:intron | 30.0% | |
| TCATGTTAACTGACAATACA+AGG | + | chr4.4:11647084-11647103 | None:intergenic | 30.0% | |
| TCTCTTTATAATGCAGATTG+AGG | - | chr4.4:11645183-11645202 | MS.gene27997:intron | 30.0% | |
| TCTTTATAATGCAGATTGAG+GGG | - | chr4.4:11645185-11645204 | MS.gene27997:intron | 30.0% | |
| TGACACTTGAAAAATGAAGT+TGG | + | chr4.4:11646505-11646524 | None:intergenic | 30.0% | |
| TTCAACTGATCAATCAACAA+AGG | + | chr4.4:11644050-11644069 | None:intergenic | 30.0% | |
| TTGGGATTAAGAAGAAACAA+AGG | + | chr4.4:11646230-11646249 | None:intergenic | 30.0% | |
| TTTAGTAAGATTCTTGGAGA+TGG | - | chr4.4:11644449-11644468 | MS.gene27997:intron | 30.0% | |
| ! | AATCTATACATGAGTTGACT+AGG | - | chr4.4:11644213-11644232 | MS.gene27997:intron | 30.0% |
| ! | AGAATGTATGTTTTGTCATG+TGG | - | chr4.4:11645092-11645111 | MS.gene27997:intron | 30.0% |
| ! | ATCAAATTGGTTCTTTGCTT+AGG | - | chr4.4:11644330-11644349 | MS.gene27997:intron | 30.0% |
| ! | CAATGTTGATTGTAGATTCT+TGG | - | chr4.4:11646294-11646313 | MS.gene27997:CDS | 30.0% |
| ! | GAATAGGTTAGTTAAGGAAA+AGG | - | chr4.4:11644307-11644326 | MS.gene27997:intron | 30.0% |
| ! | GAATTATGAGATTGCTATTG+AGG | - | chr4.4:11643821-11643840 | MS.gene27997:intron | 30.0% |
| ! | GGATTGTTGTTCAAAAAGTT+AGG | - | chr4.4:11644234-11644253 | MS.gene27997:intron | 30.0% |
| ! | TGAAGTGGAAAAATTGCTTT+TGG | - | chr4.4:11645824-11645843 | MS.gene27997:intron | 30.0% |
| !! | AAGTGGAAAAATTGCTTTTG+GGG | - | chr4.4:11645826-11645845 | MS.gene27997:intron | 30.0% |
| !! | AATCTCACGGAATTTTTCAA+CGG | + | chr4.4:11643331-11643350 | None:intergenic | 30.0% |
| !! | AATTGAGAAGATTTCTGGTA+AGG | - | chr4.4:11643623-11643642 | MS.gene27997:intron | 30.0% |
| !! | GAAGTGGAAAAATTGCTTTT+GGG | - | chr4.4:11645825-11645844 | MS.gene27997:intron | 30.0% |
| !! | GTTTGCTATTTGTCTAACTT+TGG | - | chr4.4:11644761-11644780 | MS.gene27997:intron | 30.0% |
| !!! | TTCCATTATTTTTGGTACAG+TGG | - | chr4.4:11646940-11646959 | MS.gene27997:CDS | 30.0% |
| !!! | TTTTGAAATCTATTCCCTTC+TGG | + | chr4.4:11645974-11645993 | None:intergenic | 30.0% |
| AAAGGATGAAGTTACGAAAG+TGG | + | chr4.4:11646212-11646231 | None:intergenic | 35.0% | |
| AACTATGAACTGAGTCTGAA+AGG | + | chr4.4:11646159-11646178 | None:intergenic | 35.0% | |
| AATAACCGTGAGAAACACTA+AGG | + | chr4.4:11646791-11646810 | None:intergenic | 35.0% | |
| AATCAAAGATGGAATCGTTG+AGG | - | chr4.4:11644024-11644043 | MS.gene27997:intron | 35.0% | |
| ACAGAATGATGCAAGTGTTA+AGG | - | chr4.4:11643764-11643783 | MS.gene27997:intron | 35.0% | |
| ACCATCTAAAAAATCTGCAG+GGG | + | chr4.4:11645925-11645944 | None:intergenic | 35.0% | |
| ACTGGAATTGAGAAGATTTC+TGG | - | chr4.4:11643618-11643637 | MS.gene27997:intron | 35.0% | |
| AGCACACTGTGAATGAATTA+AGG | - | chr4.4:11644709-11644728 | MS.gene27997:intron | 35.0% | |
| ATCTACAATCAACATTGACC+AGG | + | chr4.4:11646291-11646310 | None:intergenic | 35.0% | |
| ATTGGCAGCTTCAAAAGAAA+GGG | + | chr4.4:11646098-11646117 | None:intergenic | 35.0% | |
| CAAAAAATGCCCAAAGTCAA+AGG | + | chr4.4:11646886-11646905 | None:intergenic | 35.0% | |
| CACAAATTATCAATGGCTCA+AGG | + | chr4.4:11646411-11646430 | None:intergenic | 35.0% | |
| CAGTTCATAGTTCATACTCA+AGG | - | chr4.4:11646167-11646186 | MS.gene27997:intron | 35.0% | |
| CGACAAAACCTTCACAATTA+AGG | + | chr4.4:11645056-11645075 | None:intergenic | 35.0% | |
| GAAGGTGAATTTGATGTGAT+CGG | + | chr4.4:11643294-11643313 | None:intergenic | 35.0% | |
| GAATTTGATGTGATCGGAAT+TGG | + | chr4.4:11643288-11643307 | None:intergenic | 35.0% | |
| GACTTCATTCAACCGATTAA+AGG | - | chr4.4:11643416-11643435 | MS.gene27997:CDS | 35.0% | |
| GATACGTAAAGAACTCAACA+AGG | + | chr4.4:11644624-11644643 | None:intergenic | 35.0% | |
| GGTATGGAATGCTATTAGTT+AGG | - | chr4.4:11645315-11645334 | MS.gene27997:intron | 35.0% | |
| GTTGATTGTAGATTCTTGGT+GGG | - | chr4.4:11646298-11646317 | MS.gene27997:CDS | 35.0% | |
| GTTTAGATGAGACTGTGAAT+AGG | - | chr4.4:11644291-11644310 | MS.gene27997:intron | 35.0% | |
| TAAGGATGAGAAGTTGAATG+AGG | - | chr4.4:11643935-11643954 | MS.gene27997:intron | 35.0% | |
| TAGTGGTCTATCTAAATTGC+AGG | - | chr4.4:11645794-11645813 | MS.gene27997:CDS | 35.0% | |
| TGAGAAATCGAGTCATATGA+TGG | - | chr4.4:11643593-11643612 | MS.gene27997:intron | 35.0% | |
| TGTAAATGAATTGAGCCAAG+CGG | + | chr4.4:11646694-11646713 | None:intergenic | 35.0% | |
| TGTTCAAAAAGTTAGGGATG+TGG | - | chr4.4:11644241-11644260 | MS.gene27997:intron | 35.0% | |
| TTGATTGTAGATTCTTGGTG+GGG | - | chr4.4:11646299-11646318 | MS.gene27997:CDS | 35.0% | |
| TTTCTTCTCAGATTCCAACA+TGG | + | chr4.4:11647184-11647203 | None:intergenic | 35.0% | |
| ! | AAAGAAGGTGTATCTCACAT+TGG | + | chr4.4:11646249-11646268 | None:intergenic | 35.0% |
| ! | AAGAAGGTGTATCTCACATT+GGG | + | chr4.4:11646248-11646267 | None:intergenic | 35.0% |
| ! | ATGAGGTTTCTGAGAGTTTA+AGG | - | chr4.4:11643952-11643971 | MS.gene27997:intron | 35.0% |
| ! | ATGTTTTGTCATGTGGTCAT+GGG | - | chr4.4:11645099-11645118 | MS.gene27997:intron | 35.0% |
| ! | GACTGTGAATAGGTTAGTTA+AGG | - | chr4.4:11644301-11644320 | MS.gene27997:intron | 35.0% |
| ! | GAGTGCTCTAAATTTAGACT+TGG | + | chr4.4:11646672-11646691 | None:intergenic | 35.0% |
| ! | TATGTTTTGTCATGTGGTCA+TGG | - | chr4.4:11645098-11645117 | MS.gene27997:intron | 35.0% |
| ! | TGTTGATTGTAGATTCTTGG+TGG | - | chr4.4:11646297-11646316 | MS.gene27997:CDS | 35.0% |
| !! | AAGATTTCTGGTAAGGTGAA+TGG | - | chr4.4:11643630-11643649 | MS.gene27997:intron | 35.0% |
| !! | TATAAGATCGTTGATGATGC+TGG | - | chr4.4:11644107-11644126 | MS.gene27997:intron | 35.0% |
| !!! | CTTTGACTTTGGGCATTTTT+TGG | - | chr4.4:11646884-11646903 | MS.gene27997:CDS | 35.0% |
| !!! | TGTTTTTAGCGGCAGAAAAT+GGG | - | chr4.4:11644399-11644418 | MS.gene27997:intron | 35.0% |
| !!! | TTGTTTTTAGCGGCAGAAAA+TGG | - | chr4.4:11644398-11644417 | MS.gene27997:intron | 35.0% |
| !!! | TTTCTGGTTTTCAACGAAAC+TGG | - | chr4.4:11644566-11644585 | MS.gene27997:intron | 35.0% |
| AAAATGTGTTCATCCCTTGC+TGG | + | chr4.4:11646066-11646085 | None:intergenic | 40.0% | |
| AAACTCAACTCTGCCCTTAA+TGG | + | chr4.4:11644898-11644917 | None:intergenic | 40.0% | |
| AAAGTGGCAGCAAAGGAAAA+AGG | + | chr4.4:11646196-11646215 | None:intergenic | 40.0% | |
| AAATCTATTCCCTTCTGGTG+GGG | + | chr4.4:11645969-11645988 | None:intergenic | 40.0% | |
| AAGAACGGAGAATGGAAAGA+AGG | + | chr4.4:11646264-11646283 | None:intergenic | 40.0% | |
| AAGTGGCAGCAAAGGAAAAA+GGG | + | chr4.4:11646195-11646214 | None:intergenic | 40.0% | |
| ACCATAGAGCTAAAGGGAAA+AGG | + | chr4.4:11645646-11645665 | None:intergenic | 40.0% | |
| ACTTGAAGAGAAGGAAAGAG+TGG | - | chr4.4:11644981-11645000 | MS.gene27997:intron | 40.0% | |
| ACTTGAGGTCTTCTAGACTA+AGG | - | chr4.4:11647280-11647299 | MS.gene27997:CDS | 40.0% | |
| ACTTTGTTGGAATTCAGCAG+CGG | - | chr4.4:11647415-11647434 | MS.gene27997:CDS | 40.0% | |
| AGGCTGTAAATCTGGTAGAT+TGG | - | chr4.4:11647005-11647024 | MS.gene27997:CDS | 40.0% | |
| AGGGGCTGAAATTAAAAAGG+GGG | + | chr4.4:11645907-11645926 | None:intergenic | 40.0% | |
| ATAGGCCTAGATATGTATGC+TGG | - | chr4.4:11647370-11647389 | MS.gene27997:CDS | 40.0% | |
| ATGATGCAAGTGTTAAGGCT+AGG | - | chr4.4:11643769-11643788 | MS.gene27997:intron | 40.0% | |
| CAACTCATTTGAAGACGGAT+TGG | + | chr4.4:11644381-11644400 | None:intergenic | 40.0% | |
| CACATCAAATTCACCTTCAC+AGG | - | chr4.4:11643296-11643315 | MS.gene27997:CDS | 40.0% | |
| CAGGGGCTGAAATTAAAAAG+GGG | + | chr4.4:11645908-11645927 | None:intergenic | 40.0% | |
| CATCATTGCACAACTAAAGC+TGG | + | chr4.4:11645506-11645525 | None:intergenic | 40.0% | |
| CATTCTATGGTCGAGTTCTT+TGG | + | chr4.4:11644947-11644966 | None:intergenic | 40.0% | |
| CATTGGCAGCTTCAAAAGAA+AGG | + | chr4.4:11646099-11646118 | None:intergenic | 40.0% | |
| CTTACTCACGACAAACTCAA+TGG | - | chr4.4:11646755-11646774 | MS.gene27997:CDS | 40.0% | |
| CTTGAGCAAGCACCTTTAAT+CGG | + | chr4.4:11643431-11643450 | None:intergenic | 40.0% | |
| CTTGAGGTCTTCTAGACTAA+GGG | - | chr4.4:11647281-11647300 | MS.gene27997:CDS | 40.0% | |
| GAAATCTATTCCCTTCTGGT+GGG | + | chr4.4:11645970-11645989 | None:intergenic | 40.0% | |
| GCAGGGGCTGAAATTAAAAA+GGG | + | chr4.4:11645909-11645928 | None:intergenic | 40.0% | |
| GGCCACTGTACCAAAAATAA+TGG | + | chr4.4:11646945-11646964 | None:intergenic | 40.0% | |
| TAGAGCTAAAGGGAAAAGGT+AGG | + | chr4.4:11645642-11645661 | None:intergenic | 40.0% | |
| TCAAAAAGTTAGGGATGTGG+TGG | - | chr4.4:11644244-11644263 | MS.gene27997:intron | 40.0% | |
| TCACAGTCTCATCTAAACTC+TGG | + | chr4.4:11644289-11644308 | None:intergenic | 40.0% | |
| TCGAGTCATATGATGGTTAC+TGG | - | chr4.4:11643600-11643619 | MS.gene27997:intron | 40.0% | |
| TGAAATCTATTCCCTTCTGG+TGG | + | chr4.4:11645971-11645990 | None:intergenic | 40.0% | |
| TGAGAAACACTAAGGCTGAA+AGG | + | chr4.4:11646783-11646802 | None:intergenic | 40.0% | |
| TGAGAACAGAGAAGACTTGA+GGG | - | chr4.4:11647341-11647360 | MS.gene27997:CDS | 40.0% | |
| TGATCGCAGTGACATAAACA+TGG | + | chr4.4:11645586-11645605 | None:intergenic | 40.0% | |
| TGATGCAAGTGTTAAGGCTA+GGG | - | chr4.4:11643770-11643789 | MS.gene27997:intron | 40.0% | |
| TGATGTGATCGGAATTGGAT+CGG | + | chr4.4:11643283-11643302 | None:intergenic | 40.0% | |
| TGATTGTAGATTCTTGGTGG+GGG | - | chr4.4:11646300-11646319 | MS.gene27997:CDS | 40.0% | |
| TGCAGGGGCTGAAATTAAAA+AGG | + | chr4.4:11645910-11645929 | None:intergenic | 40.0% | |
| TGCTTGGGGATGAACTAATT+AGG | - | chr4.4:11646985-11647004 | MS.gene27997:CDS | 40.0% | |
| TGGAAGACCATAGAGCTAAA+GGG | + | chr4.4:11645652-11645671 | None:intergenic | 40.0% | |
| TGGTCTATCTAAATTGCAGG+CGG | - | chr4.4:11645797-11645816 | MS.gene27997:intron | 40.0% | |
| TTAAGGAAGGAAGAGAGTGA+GGG | - | chr4.4:11643969-11643988 | MS.gene27997:intron | 40.0% | |
| TTCAAAAGAAAGGGCTTTGC+AGG | + | chr4.4:11646089-11646108 | None:intergenic | 40.0% | |
| TTCAGCCTTAGTGTTTCTCA+CGG | - | chr4.4:11646783-11646802 | MS.gene27997:CDS | 40.0% | |
| TTGAGAACAGAGAAGACTTG+AGG | - | chr4.4:11647340-11647359 | MS.gene27997:CDS | 40.0% | |
| TTTAAGGAAGGAAGAGAGTG+AGG | - | chr4.4:11643968-11643987 | MS.gene27997:intron | 40.0% | |
| ! | GGTGATATGCCTTTGACTTT+GGG | - | chr4.4:11646874-11646893 | MS.gene27997:CDS | 40.0% |
| ! | GGTTTCTGAGAGTTTAAGGA+AGG | - | chr4.4:11643956-11643975 | MS.gene27997:intron | 40.0% |
| ! | TAAATTTAGAGCACTCCGCT+TGG | - | chr4.4:11646676-11646695 | MS.gene27997:CDS | 40.0% |
| ! | TCTGGTAAGGTGAATGGTTT+TGG | - | chr4.4:11643636-11643655 | MS.gene27997:intron | 40.0% |
| ! | TGAAGTCTGTAACTCCGTTT+TGG | + | chr4.4:11643403-11643422 | None:intergenic | 40.0% |
| ! | TGGTGATATGCCTTTGACTT+TGG | - | chr4.4:11646873-11646892 | MS.gene27997:CDS | 40.0% |
| ! | TTTATCTGGAGCAGCAATAG+TGG | - | chr4.4:11645777-11645796 | MS.gene27997:CDS | 40.0% |
| !! | AGGTGTTGAACAGCAATTTG+TGG | - | chr4.4:11645288-11645307 | MS.gene27997:intron | 40.0% |
| !! | CGTTGATGATGCTGGTTATT+CGG | - | chr4.4:11644115-11644134 | MS.gene27997:intron | 40.0% |
| !! | TGCTTTGGAGGATGTTGTTA+AGG | - | chr4.4:11644659-11644678 | MS.gene27997:intron | 40.0% |
| !! | TTAGGAGTGCTTTGTCAAAG+AGG | - | chr4.4:11644348-11644367 | MS.gene27997:intron | 40.0% |
| !! | TTGCTTTTCCTGATCAAGCT+CGG | + | chr4.4:11643358-11643377 | None:intergenic | 40.0% |
| !!! | ACCTTTTCCCTTTAGCTCTA+TGG | - | chr4.4:11645642-11645661 | MS.gene27997:intron | 40.0% |
| !!! | TAACTCCGTTTTGGCTTTCT+CGG | + | chr4.4:11643394-11643413 | None:intergenic | 40.0% |
| AAAAGTTAGGGATGTGGTGG+AGG | - | chr4.4:11644247-11644266 | MS.gene27997:intron | 45.0% | |
| AACTCGACCATAGAATGCAC+CGG | - | chr4.4:11644950-11644969 | MS.gene27997:intron | 45.0% | |
| AAGAAAACTGCAGCCGTTGA+GGG | - | chr4.4:11643891-11643910 | MS.gene27997:intron | 45.0% | |
| AATCTATTCCCTTCTGGTGG+GGG | + | chr4.4:11645968-11645987 | None:intergenic | 45.0% | |
| AGAAACTGCGAGGCAATTAG+AGG | - | chr4.4:11643533-11643552 | MS.gene27997:CDS | 45.0% | |
| AGAGGCAAAGCAATCCATGT+TGG | - | chr4.4:11647167-11647186 | MS.gene27997:CDS | 45.0% | |
| AGATTTCTCTGCTGCATCTC+TGG | + | chr4.4:11647247-11647266 | None:intergenic | 45.0% | |
| AGCAATTTGTGGCACAGGTA+TGG | - | chr4.4:11645299-11645318 | MS.gene27997:intron | 45.0% | |
| AGTGGCAGCAAAGGAAAAAG+GGG | + | chr4.4:11646194-11646213 | None:intergenic | 45.0% | |
| AGTTACGAAAGTGGCAGCAA+AGG | + | chr4.4:11646203-11646222 | None:intergenic | 45.0% | |
| CATGGCCAGCATACATATCT+AGG | + | chr4.4:11647378-11647397 | None:intergenic | 45.0% | |
| CATTGACCAGGAGAGAAGAA+CGG | + | chr4.4:11646279-11646298 | None:intergenic | 45.0% | |
| CTAGATATGTATGCTGGCCA+TGG | - | chr4.4:11647376-11647395 | MS.gene27997:CDS | 45.0% | |
| CTAGGGAACAGATTGAACAG+AGG | - | chr4.4:11643799-11643818 | MS.gene27997:intron | 45.0% | |
| CTCTCAAGTTAGCAGACTTG+AGG | - | chr4.4:11647265-11647284 | MS.gene27997:CDS | 45.0% | |
| CTGAAATTAAAAAGGGGGGG+GGG | + | chr4.4:11645902-11645921 | None:intergenic | 45.0% | |
| CTGGAAGACCATAGAGCTAA+AGG | + | chr4.4:11645653-11645672 | None:intergenic | 45.0% | |
| GAAATATACCGGTATGGCTG+CGG | - | chr4.4:11643689-11643708 | MS.gene27997:intron | 45.0% | |
| GACTGATACGCAACAGCAAA+CGG | - | chr4.4:11647437-11647456 | MS.gene27997:CDS | 45.0% | |
| GAGAACAGAGAAGACTTGAG+GGG | - | chr4.4:11647342-11647361 | MS.gene27997:CDS | 45.0% | |
| GAGTGCTTTGTCAAAGAGGA+TGG | - | chr4.4:11644352-11644371 | MS.gene27997:intron | 45.0% | |
| GATGCTGCCTGAAAATGCAT+TGG | + | chr4.4:11646116-11646135 | None:intergenic | 45.0% | |
| GCAAACGGCTTCTAACGAAA+TGG | - | chr4.4:11647452-11647471 | MS.gene27997:CDS | 45.0% | |
| GCTGAAATTAAAAAGGGGGG+GGG | + | chr4.4:11645903-11645922 | None:intergenic | 45.0% | |
| GCTTTCTGAGTCGTTGTTTG+TGG | - | chr4.4:11644139-11644158 | MS.gene27997:intron | 45.0% | |
| GGCTGAAATTAAAAAGGGGG+GGG | + | chr4.4:11645904-11645923 | None:intergenic | 45.0% | |
| GGGCTGAAATTAAAAAGGGG+GGG | + | chr4.4:11645905-11645924 | None:intergenic | 45.0% | |
| GGGGCTGAAATTAAAAAGGG+GGG | + | chr4.4:11645906-11645925 | None:intergenic | 45.0% | |
| GTCGCAGAAATATACCGGTA+TGG | - | chr4.4:11643683-11643702 | MS.gene27997:intron | 45.0% | |
| GTTGTTTGTGGCGCAAGAAA+CGG | - | chr4.4:11644151-11644170 | MS.gene27997:intron | 45.0% | |
| TAACAGCATCATCACGCAAC+CGG | + | chr4.4:11643482-11643501 | None:intergenic | 45.0% | |
| TAAGGCTAGGGATCAAGCTA+GGG | - | chr4.4:11643782-11643801 | MS.gene27997:intron | 45.0% | |
| TCCAAGCTAAAGCTCAAGCA+TGG | - | chr4.4:11646361-11646380 | MS.gene27997:CDS | 45.0% | |
| TCGTGAGTAAGAAGATGCCA+TGG | + | chr4.4:11646746-11646765 | None:intergenic | 45.0% | |
| TCTTTACGTATCCACTGTGC+AGG | - | chr4.4:11644632-11644651 | MS.gene27997:intron | 45.0% | |
| TGAAAGGAGTAACTCAGCAG+AGG | + | chr4.4:11646143-11646162 | None:intergenic | 45.0% | |
| TGAAATTAAAAAGGGGGGGG+GGG | + | chr4.4:11645901-11645920 | None:intergenic | 45.0% | |
| TGAACAGCAATTTGTGGCAC+AGG | - | chr4.4:11645294-11645313 | MS.gene27997:intron | 45.0% | |
| TGCGAGGCAATTAGAGGAAT+CGG | - | chr4.4:11643539-11643558 | MS.gene27997:CDS | 45.0% | |
| TGCTATTGAGGTTTCGCAGT+TGG | - | chr4.4:11643833-11643852 | MS.gene27997:intron | 45.0% | |
| TGCTTGCTCAAGAAGCCATA+CGG | - | chr4.4:11643439-11643458 | MS.gene27997:CDS | 45.0% | |
| TTAAGGCTAGGGATCAAGCT+AGG | - | chr4.4:11643781-11643800 | MS.gene27997:intron | 45.0% | |
| TTCTAGACTAAGGGACAGAG+TGG | - | chr4.4:11647290-11647309 | MS.gene27997:CDS | 45.0% | |
| ! | ACCATGCTTGAGCTTTAGCT+TGG | + | chr4.4:11646365-11646384 | None:intergenic | 45.0% |
| ! | AGCTTCTAGAAGAAACTGCG+AGG | - | chr4.4:11643523-11643542 | MS.gene27997:CDS | 45.0% |
| ! | ATACGGAAGCGCGATGAATT+CGG | - | chr4.4:11643456-11643475 | MS.gene27997:CDS | 45.0% |
| ! | ATGTTTTTCCCCCACCAGAA+GGG | - | chr4.4:11645957-11645976 | MS.gene27997:intron | 45.0% |
| ! | GAAGCTGCCAATGCATTTTC+AGG | - | chr4.4:11646106-11646125 | MS.gene27997:intron | 45.0% |
| ! | GGAGAGGGATTTGGTTGTTA+AGG | - | chr4.4:11643917-11643936 | MS.gene27997:intron | 45.0% |
| ! | GGTAATTTGCGACAGGCATT+TGG | - | chr4.4:11645127-11645146 | MS.gene27997:intron | 45.0% |
| ! | GTTGCGTGATGATGCTGTTA+GGG | - | chr4.4:11643482-11643501 | MS.gene27997:CDS | 45.0% |
| ! | TGATGATGCTGTTAGGGAGA+AGG | - | chr4.4:11643488-11643507 | MS.gene27997:CDS | 45.0% |
| !!! | GCCCCTGCAGATTTTTTAGA+TGG | - | chr4.4:11645921-11645940 | MS.gene27997:intron | 45.0% |
| !!! | GGTAAGGTGAATGGTTTTGG+TGG | - | chr4.4:11643639-11643658 | MS.gene27997:intron | 45.0% |
| !!! | GTGAATGGTTTTGGTGGAAG+TGG | - | chr4.4:11643645-11643664 | MS.gene27997:intron | 45.0% |
| AAATTAAAAAGGGGGGGGGG+GGG | + | chr4.4:11645899-11645918 | None:intergenic | 50.0% | |
| AAGACTTGAGGGGCCGAAAT+AGG | - | chr4.4:11647352-11647371 | MS.gene27997:CDS | 50.0% | |
| ACGGAGACTTCATCCTGTGA+AGG | + | chr4.4:11643312-11643331 | None:intergenic | 50.0% | |
| ACTCGACCATAGAATGCACC+GGG | - | chr4.4:11644951-11644970 | MS.gene27997:intron | 50.0% | |
| AGATTCCATCCCAGCCAAAG+AGG | + | chr4.4:11644198-11644217 | None:intergenic | 50.0% | |
| AGTTCGATGCGTGTCATGCT+AGG | - | chr4.4:11646009-11646028 | MS.gene27997:CDS | 50.0% | |
| ATAAGTCACCGCAGCCATAC+CGG | + | chr4.4:11643700-11643719 | None:intergenic | 50.0% | |
| ATCCCTCTCCAAACCCTCAA+CGG | + | chr4.4:11643907-11643926 | None:intergenic | 50.0% | |
| ATGGTCGAGTTCTTTGGCCT+GGG | + | chr4.4:11644941-11644960 | None:intergenic | 50.0% | |
| ATTGCAGGCGGATAGTGAAG+TGG | - | chr4.4:11645809-11645828 | MS.gene27997:intron | 50.0% | |
| CAGGAGAGAAGAACGGAGAA+TGG | + | chr4.4:11646272-11646291 | None:intergenic | 50.0% | |
| CATTCTCCGTTCTTCTCTCC+TGG | - | chr4.4:11646270-11646289 | MS.gene27997:CDS | 50.0% | |
| GAAATTAAAAAGGGGGGGGG+GGG | + | chr4.4:11645900-11645919 | None:intergenic | 50.0% | |
| GAAGAAAACTGCAGCCGTTG+AGG | - | chr4.4:11643890-11643909 | MS.gene27997:intron | 50.0% | |
| GAATTCATCGCGCTTCCGTA+TGG | + | chr4.4:11643457-11643476 | None:intergenic | 50.0% | |
| GAGTGAGGGTTTGCAGTTGA+AGG | - | chr4.4:11643983-11644002 | MS.gene27997:intron | 50.0% | |
| GCAATTAGAGGAATCGGCGA+AGG | - | chr4.4:11643545-11643564 | MS.gene27997:CDS | 50.0% | |
| GCAGATTGAGGGGCTAATGA+TGG | - | chr4.4:11645195-11645214 | MS.gene27997:intron | 50.0% | |
| GCTCAAGCAGGAACTTGAAG+AGG | - | chr4.4:11647149-11647168 | MS.gene27997:CDS | 50.0% | |
| GCTCATCTTTGATGCAGCCA+TGG | - | chr4.4:11646726-11646745 | MS.gene27997:CDS | 50.0% | |
| GCTGGAGATGAGCAGTGAAA+GGG | + | chr4.4:11646048-11646067 | None:intergenic | 50.0% | |
| GGTGGAGGAACTTGAAGAGA+AGG | - | chr4.4:11644972-11644991 | MS.gene27997:intron | 50.0% | |
| TAAGCAGCACATAGAAGCCC+AGG | - | chr4.4:11644921-11644940 | MS.gene27997:intron | 50.0% | |
| TATGGTCGAGTTCTTTGGCC+TGG | + | chr4.4:11644942-11644961 | None:intergenic | 50.0% | |
| TCACTGCTCATCTCCAGCAA+GGG | - | chr4.4:11646050-11646069 | MS.gene27997:intron | 50.0% | |
| TGAGAATGTACGCGCCTCTT+TGG | - | chr4.4:11644181-11644200 | MS.gene27997:intron | 50.0% | |
| TGAGGGTTTGGAGAGGGATT+TGG | - | chr4.4:11643908-11643927 | MS.gene27997:intron | 50.0% | |
| TGCAGGACACAACACTACAC+TGG | + | chr4.4:11645727-11645746 | None:intergenic | 50.0% | |
| TGCTGGAGATGAGCAGTGAA+AGG | + | chr4.4:11646049-11646068 | None:intergenic | 50.0% | |
| TGCTGTTAGGGAGAAGGAAG+AGG | - | chr4.4:11643494-11643513 | MS.gene27997:CDS | 50.0% | |
| TTCACTGCTCATCTCCAGCA+AGG | - | chr4.4:11646049-11646068 | MS.gene27997:intron | 50.0% | |
| TTGGTACAGTGGCCATTCGT+TGG | - | chr4.4:11646951-11646970 | MS.gene27997:CDS | 50.0% | |
| ! | CATGTTTTTCCCCCACCAGA+AGG | - | chr4.4:11645956-11645975 | MS.gene27997:intron | 50.0% |
| ! | GGTTGCGTGATGATGCTGTT+AGG | - | chr4.4:11643481-11643500 | MS.gene27997:CDS | 50.0% |
| ! | TCTCTTCAAGTTCCTCCACC+CGG | + | chr4.4:11644972-11644991 | None:intergenic | 50.0% |
| !! | AGCGGCAGAAAATGGGTTGA+GGG | - | chr4.4:11644406-11644425 | MS.gene27997:intron | 50.0% |
| !! | GAAAATGGGTTGAGGGAGGT+TGG | - | chr4.4:11644413-11644432 | MS.gene27997:intron | 50.0% |
| !! | GGGGCTAATGATGGACATTG+CGG | - | chr4.4:11645204-11645223 | MS.gene27997:intron | 50.0% |
| !! | TAGCGGCAGAAAATGGGTTG+AGG | - | chr4.4:11644405-11644424 | MS.gene27997:intron | 50.0% |
| !!! | AATTGCTTTTGGGGCTGCCT+TGG | - | chr4.4:11645835-11645854 | MS.gene27997:intron | 50.0% |
| AACTGCAGCCGTTGAGGGTT+TGG | - | chr4.4:11643896-11643915 | MS.gene27997:intron | 55.0% | |
| AATGTACGCGCCTCTTTGGC+TGG | - | chr4.4:11644185-11644204 | MS.gene27997:intron | 55.0% | |
| AATTAAAAAGGGGGGGGGGG+GGG | + | chr4.4:11645898-11645917 | None:intergenic | 55.0% | |
| AGCCGTTGAGGGTTTGGAGA+GGG | - | chr4.4:11643902-11643921 | MS.gene27997:intron | 55.0% | |
| ATGTACGCGCCTCTTTGGCT+GGG | - | chr4.4:11644186-11644205 | MS.gene27997:intron | 55.0% | |
| ATGTATGCTGGCCATGGCAG+TGG | - | chr4.4:11647382-11647401 | MS.gene27997:CDS | 55.0% | |
| CAAGCTCGGCGAGAATCTCA+CGG | + | chr4.4:11643344-11643363 | None:intergenic | 55.0% | |
| CCGCGGTCGCAGAAATATAC+CGG | - | chr4.4:11643678-11643697 | MS.gene27997:intron | 55.0% | |
| CGAATCGGCATCTAAGTCGC+CGG | + | chr4.4:11643232-11643251 | None:intergenic | 55.0% | |
| GATTCTCGCCGAGCTTGATC+AGG | - | chr4.4:11643347-11643366 | MS.gene27997:CDS | 55.0% | |
| GCAGTTGTCAACGCTCAAGC+AGG | - | chr4.4:11647137-11647156 | MS.gene27997:CDS | 55.0% | |
| GGAGCGGCAAGGATTACGAT+CGG | - | chr4.4:11643566-11643585 | MS.gene27997:intron | 55.0% | |
| GGTATGGCTGCGGTGACTTA+TGG | - | chr4.4:11643699-11643718 | MS.gene27997:intron | 55.0% | |
| GTAGTGTTGTGTCCTGCAGC+TGG | - | chr4.4:11645729-11645748 | MS.gene27997:CDS | 55.0% | |
| TACGTATCCACTGTGCAGGC+TGG | - | chr4.4:11644636-11644655 | MS.gene27997:intron | 55.0% | |
| TAGAGGAATCGGCGAAGGAG+CGG | - | chr4.4:11643550-11643569 | MS.gene27997:CDS | 55.0% | |
| ! | CCGGTATATTTCTGCGACCG+CGG | + | chr4.4:11643681-11643700 | None:intergenic | 55.0% |
| ! | CGGCGACTTAGATGCCGATT+CGG | - | chr4.4:11643230-11643249 | MS.gene27997:CDS | 55.0% |
| ! | GGCTGTGGGTAATTTGCGAC+AGG | - | chr4.4:11645120-11645139 | MS.gene27997:intron | 55.0% |
| ! | GTCATGTGGTCATGGGCTGT+GGG | - | chr4.4:11645106-11645125 | MS.gene27997:intron | 55.0% |
| ! | TGGCTCGGCATGGACTTTGT+TGG | - | chr4.4:11647402-11647421 | MS.gene27997:CDS | 55.0% |
| ! | TGTCATGTGGTCATGGGCTG+TGG | - | chr4.4:11645105-11645124 | MS.gene27997:intron | 55.0% |
| !! | GGCAGAAAATGGGTTGAGGG+AGG | - | chr4.4:11644409-11644428 | MS.gene27997:intron | 55.0% |
| !!! | CTCCGTTTTGGCTTTCTCGG+CGG | + | chr4.4:11643391-11643410 | None:intergenic | 55.0% |
| AGAGACAGCAGCTGCTGCCA+TGG | - | chr4.4:11647218-11647237 | MS.gene27997:CDS | 60.0% | |
| AGTTCATCCCCAAGCAGCGC+AGG | + | chr4.4:11646981-11647000 | None:intergenic | 60.0% | |
| ATTAAAAAGGGGGGGGGGGG+GGG | + | chr4.4:11645897-11645916 | None:intergenic | 60.0% | |
| CAAGAAGCTGCTGCAGGCAC+AGG | - | chr4.4:11645268-11645287 | MS.gene27997:intron | 60.0% | |
| CACTGTGCAGGCTGGTGCTT+TGG | - | chr4.4:11644644-11644663 | MS.gene27997:intron | 60.0% | |
| CAGCCGTTGAGGGTTTGGAG+AGG | - | chr4.4:11643901-11643920 | MS.gene27997:intron | 60.0% | |
| CCATAGAATGCACCGGGTGG+AGG | - | chr4.4:11644957-11644976 | MS.gene27997:intron | 60.0% | |
| CCTCCACCCGGTGCATTCTA+TGG | + | chr4.4:11644960-11644979 | None:intergenic | 60.0% | |
| CGACCATAGAATGCACCGGG+TGG | - | chr4.4:11644954-11644973 | MS.gene27997:intron | 60.0% | |
| CGCCGCCGAGAAAGCCAAAA+CGG | - | chr4.4:11643386-11643405 | MS.gene27997:CDS | 60.0% | |
| GCAGAGCAAGAAGCTGCTGC+AGG | - | chr4.4:11645262-11645281 | MS.gene27997:intron | 60.0% | |
| GTTCATCCCCAAGCAGCGCA+GGG | + | chr4.4:11646980-11646999 | None:intergenic | 60.0% | |
| TGCTGCATCTCTGGCTGCCA+TGG | + | chr4.4:11647238-11647257 | None:intergenic | 60.0% | |
| TGTGCAGGCTGGTGCTTTGG+AGG | - | chr4.4:11644647-11644666 | MS.gene27997:intron | 60.0% | |
| ! | CAAAGCACCAGCCTGCACAG+TGG | + | chr4.4:11644646-11644665 | None:intergenic | 60.0% |
| ! | GGAAGCGCGATGAATTCGGC+CGG | - | chr4.4:11643460-11643479 | MS.gene27997:CDS | 60.0% |
| !! | GAAGTGGAAGCGCTTTGCCG+CGG | - | chr4.4:11643661-11643680 | MS.gene27997:intron | 60.0% |
| !! | GACGTCGCTGAGCACCGAAT+CGG | + | chr4.4:11643247-11643266 | None:intergenic | 60.0% |
| ACGCGCCTCTTTGGCTGGGA+TGG | - | chr4.4:11644190-11644209 | MS.gene27997:intron | 65.0% | |
| AGCGCAGGGCAGCCAACGAA+TGG | + | chr4.4:11646966-11646985 | None:intergenic | 65.0% | |
| CTCAGCGACGTCGAGGACGA+CGG | - | chr4.4:11643255-11643274 | MS.gene27997:CDS | 65.0% | |
| GAATCGGCGAAGGAGCGGCA+AGG | - | chr4.4:11643555-11643574 | MS.gene27997:CDS | 65.0% | |
| TCCATGCCGAGCCACTGCCA+TGG | + | chr4.4:11647396-11647415 | None:intergenic | 65.0% | |
| TGCTGGCCATGGCAGTGGCT+CGG | - | chr4.4:11647387-11647406 | MS.gene27997:CDS | 65.0% | |
| TTAAAAAGGGGGGGGGGGGG+GGG | + | chr4.4:11645896-11645915 | None:intergenic | 65.0% | |
| TTGGCTGCCCTGCGCTGCTT+GGG | - | chr4.4:11646970-11646989 | MS.gene27997:CDS | 65.0% | |
| !! | TTCGGTGCTCAGCGACGTCG+AGG | - | chr4.4:11643248-11643267 | MS.gene27997:CDS | 65.0% |
| GGCATCTAAGTCGCCGGCGC+CGG | + | chr4.4:11643226-11643245 | None:intergenic | 70.0% | |
| GTGTCCTGCAGCTGGAGCGC+TGG | - | chr4.4:11645737-11645756 | MS.gene27997:CDS | 70.0% | |
| GTTGGCTGCCCTGCGCTGCT+TGG | - | chr4.4:11646969-11646988 | MS.gene27997:CDS | 70.0% | |
| TAAAAAGGGGGGGGGGGGGG+GGG | + | chr4.4:11645895-11645914 | None:intergenic | 70.0% | |
| TGGCTGCCCTGCGCTGCTTG+GGG | - | chr4.4:11646971-11646990 | MS.gene27997:CDS | 70.0% | |
| TGGTCCAGCGCTCCAGCTGC+AGG | + | chr4.4:11645744-11645763 | None:intergenic | 70.0% | |
| ! | GCCATGGCAGTGGCTCGGCA+TGG | - | chr4.4:11647392-11647411 | MS.gene27997:CDS | 70.0% |
| AAAAAGGGGGGGGGGGGGGG+GGG | + | chr4.4:11645894-11645913 | None:intergenic | 75.0% | |
| GGGGGGGGGGGGGGAAATGA+GGG | + | chr4.4:11645884-11645903 | None:intergenic | 75.0% | |
| ! | AAAAGGGGGGGGGGGGGGGG+GGG | + | chr4.4:11645893-11645912 | None:intergenic | 80.0% |
| ! | GGGGGGGGGGGGGGGAAATG+AGG | + | chr4.4:11645885-11645904 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 11643219 | 11647497 | 11643219 | ID=MS.gene27997 |
| chr4.4 | mRNA | 11643219 | 11647497 | 11643219 | ID=MS.gene27997.t1;Parent=MS.gene27997 |
| chr4.4 | exon | 11646175 | 11647497 | 11646175 | ID=MS.gene27997.t1.exon1;Parent=MS.gene27997.t1 |
| chr4.4 | CDS | 11646175 | 11647497 | 11646175 | ID=cds.MS.gene27997.t1;Parent=MS.gene27997.t1 |
| chr4.4 | exon | 11645986 | 11646062 | 11645986 | ID=MS.gene27997.t1.exon2;Parent=MS.gene27997.t1 |
| chr4.4 | CDS | 11645986 | 11646062 | 11645986 | ID=cds.MS.gene27997.t1;Parent=MS.gene27997.t1 |
| chr4.4 | exon | 11645702 | 11645813 | 11645702 | ID=MS.gene27997.t1.exon3;Parent=MS.gene27997.t1 |
| chr4.4 | CDS | 11645702 | 11645813 | 11645702 | ID=cds.MS.gene27997.t1;Parent=MS.gene27997.t1 |
| chr4.4 | exon | 11645401 | 11645517 | 11645401 | ID=MS.gene27997.t1.exon4;Parent=MS.gene27997.t1 |
| chr4.4 | CDS | 11645401 | 11645517 | 11645401 | ID=cds.MS.gene27997.t1;Parent=MS.gene27997.t1 |
| chr4.4 | exon | 11643219 | 11643575 | 11643219 | ID=MS.gene27997.t1.exon5;Parent=MS.gene27997.t1 |
| chr4.4 | CDS | 11643219 | 11643575 | 11643219 | ID=cds.MS.gene27997.t1;Parent=MS.gene27997.t1 |
| Gene Sequence |
| Protein sequence |
