AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene040550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene040550.t1 MTR_2g068840 95.390 282 13 0 1 282 1 282 0.0 551
MS.gene040550.t1 MTR_2g068800 75.177 282 51 1 1 282 1 263 9.78e-153 428
MS.gene040550.t1 MTR_2g068850 86.316 190 26 0 1 190 1 190 4.75e-119 340
MS.gene040550.t1 MTR_3g045230 43.110 283 146 5 6 282 2 275 1.08e-72 227
MS.gene040550.t1 MTR_3g043900 42.756 283 146 5 6 282 2 274 3.69e-68 215
MS.gene040550.t1 MTR_7g102720 37.857 280 149 6 4 282 1 256 9.82e-57 185
MS.gene040550.t1 MTR_8g009110 38.462 273 141 10 21 282 27 283 4.20e-49 166
MS.gene040550.t1 MTR_2g069090 35.448 268 158 6 21 282 32 290 1.01e-48 166
MS.gene040550.t1 MTR_8g009160 36.900 271 147 8 21 282 27 282 1.35e-47 162
MS.gene040550.t1 MTR_8g009090 38.376 271 143 8 21 282 27 282 2.40e-47 162
MS.gene040550.t1 MTR_1g062110 34.657 277 158 6 21 282 26 294 3.31e-47 160
MS.gene040550.t1 MTR_8g008930 36.667 270 150 6 21 282 27 283 7.42e-47 160
MS.gene040550.t1 MTR_2g069190 35.448 268 157 6 21 282 32 289 9.15e-47 160
MS.gene040550.t1 MTR_1g062110 34.296 277 159 6 21 282 26 294 1.14e-46 160
MS.gene040550.t1 MTR_2g069210 36.194 268 155 6 21 282 28 285 1.47e-46 160
MS.gene040550.t1 MTR_8g028435 37.269 271 146 8 21 282 27 282 1.86e-46 159
MS.gene040550.t1 MTR_7g029655 34.572 269 159 6 21 282 27 285 1.32e-45 157
MS.gene040550.t1 MTR_0032s0040 33.803 284 146 7 21 282 27 290 8.90e-45 155
MS.gene040550.t1 MTR_1g070185 33.333 267 164 6 20 282 32 288 2.69e-44 154
MS.gene040550.t1 MTR_3g091360 36.170 235 137 4 53 282 50 276 3.62e-44 153
MS.gene040550.t1 MTR_8g041600 35.185 270 157 8 21 282 32 291 1.86e-43 150
MS.gene040550.t1 MTR_8g009170 36.765 272 147 9 21 282 27 283 2.60e-43 149
MS.gene040550.t1 MTR_8g041620 34.815 270 158 8 21 282 32 291 5.88e-43 151
MS.gene040550.t1 MTR_8g009170 36.765 272 147 9 21 282 27 283 6.96e-43 150
MS.gene040550.t1 MTR_2g069300 33.564 289 163 9 8 282 3 276 1.81e-42 149
MS.gene040550.t1 MTR_7g102820 30.796 289 161 8 21 282 25 301 2.76e-42 149
MS.gene040550.t1 MTR_4g117880 34.559 272 151 10 22 282 28 283 3.53e-42 148
MS.gene040550.t1 MTR_8g041600 34.815 270 158 8 21 282 32 291 4.48e-42 149
MS.gene040550.t1 MTR_2g069010 32.601 273 159 9 21 282 32 290 8.61e-42 148
MS.gene040550.t1 MTR_1g043770 33.457 269 158 6 21 282 19 273 1.47e-40 142
MS.gene040550.t1 MTR_1g043770 33.457 269 158 6 21 282 19 273 2.11e-40 144
MS.gene040550.t1 MTR_8g009080 32.967 273 157 7 20 281 57 314 4.31e-40 142
MS.gene040550.t1 MTR_1g043810 33.210 271 158 7 21 282 19 275 4.88e-40 142
MS.gene040550.t1 MTR_1g043810 33.333 270 157 7 21 281 19 274 7.86e-40 142
MS.gene040550.t1 MTR_1g093140 32.673 303 169 12 3 282 4 294 1.09e-39 142
MS.gene040550.t1 MTR_8g009080 32.847 274 158 7 20 282 57 315 1.28e-39 142
MS.gene040550.t1 MTR_8g009120 35.821 268 145 10 20 282 26 271 1.99e-39 141
MS.gene040550.t1 MTR_8g009080 33.708 267 157 8 20 278 57 311 3.25e-39 140
MS.gene040550.t1 MTR_1g043760 32.593 270 160 8 21 282 19 274 5.38e-39 140
MS.gene040550.t1 MTR_2g068950 32.491 277 154 9 21 282 26 284 6.64e-39 140
MS.gene040550.t1 MTR_8g024120 34.848 264 151 10 28 282 13 264 7.41e-39 139
MS.gene040550.t1 MTR_7g056347 31.419 296 172 9 3 282 8 288 1.98e-38 139
MS.gene040550.t1 MTR_7g105070 29.811 265 175 4 21 282 23 279 8.43e-38 137
MS.gene040550.t1 MTR_2g069020 29.655 290 182 9 2 282 12 288 1.26e-37 136
MS.gene040550.t1 MTR_3g091350 34.016 244 146 5 45 282 49 283 1.66e-37 136
MS.gene040550.t1 MTR_1g093110 31.387 274 165 9 21 282 29 291 1.89e-37 136
MS.gene040550.t1 MTR_2g069020 29.655 290 182 9 2 282 12 288 1.99e-37 136
MS.gene040550.t1 MTR_1g032140 33.456 272 155 7 21 282 29 284 4.59e-37 135
MS.gene040550.t1 MTR_1g043775 33.088 272 157 8 21 282 19 275 6.81e-37 133
MS.gene040550.t1 MTR_1g093120 29.592 294 184 7 3 282 4 288 7.82e-37 134
MS.gene040550.t1 MTR_1g043775 33.210 271 156 8 21 281 19 274 1.50e-36 133
MS.gene040550.t1 MTR_7g068650 31.429 280 162 9 22 282 15 283 1.68e-36 133
MS.gene040550.t1 MTR_1g032220 32.967 273 157 7 20 282 35 291 1.70e-36 134
MS.gene040550.t1 MTR_1g032250 32.967 273 157 7 20 282 35 291 1.99e-36 133
MS.gene040550.t1 MTR_3g092890 34.848 264 140 9 32 282 14 258 2.21e-36 132
MS.gene040550.t1 MTR_3g063180 30.000 270 174 8 22 282 10 273 3.00e-36 132
MS.gene040550.t1 MTR_2g068960 31.618 272 163 7 21 282 26 284 3.82e-36 132
MS.gene040550.t1 MTR_4g024660 28.195 266 178 5 21 282 32 288 3.91e-36 132
MS.gene040550.t1 MTR_8g075890 34.632 231 138 6 54 278 38 261 1.77e-35 130
MS.gene040550.t1 MTR_8g062600 27.820 266 179 5 21 282 32 288 1.03e-34 129
MS.gene040550.t1 MTR_8g063070 30.108 279 156 8 21 282 32 288 1.15e-34 129
MS.gene040550.t1 MTR_3g058610 32.035 231 144 6 54 278 38 261 2.93e-34 127
MS.gene040550.t1 MTR_8g009150 31.985 272 142 9 20 282 26 263 4.08e-34 127
MS.gene040550.t1 MTR_4g015790 29.412 289 165 8 22 282 14 291 4.31e-34 127
MS.gene040550.t1 MTR_4g087110 34.252 254 129 10 55 282 26 267 4.91e-34 127
MS.gene040550.t1 MTR_4g087090 32.520 246 139 7 55 282 30 266 7.79e-34 126
MS.gene040550.t1 MTR_1g070135 32.576 264 156 7 28 282 10 260 3.10e-33 123
MS.gene040550.t1 MTR_5g082750 30.545 275 166 8 22 282 14 277 3.30e-33 124
MS.gene040550.t1 MTR_3g070860 30.142 282 168 9 15 282 12 278 4.49e-33 124
MS.gene040550.t1 MTR_6g015950 31.538 260 153 8 33 282 16 260 8.43e-33 123
MS.gene040550.t1 MTR_1g034120 30.000 280 158 9 30 282 1 269 9.10e-33 123
MS.gene040550.t1 MTR_1g070135 32.197 264 157 7 28 282 10 260 1.08e-32 123
MS.gene040550.t1 MTR_7g062550 33.579 271 157 10 22 282 25 282 1.64e-32 123
MS.gene040550.t1 MTR_7g081710 30.882 272 168 8 20 282 12 272 1.99e-32 122
MS.gene040550.t1 MTR_1g034060 29.643 280 159 9 30 282 1 269 2.15e-32 122
MS.gene040550.t1 MTR_8g075830 33.766 231 140 6 54 278 38 261 2.43e-32 122
MS.gene040550.t1 MTR_2g437380 31.939 263 153 9 33 282 28 277 3.67e-32 122
MS.gene040550.t1 MTR_5g011250 29.032 279 171 8 22 282 8 277 7.29e-32 121
MS.gene040550.t1 MTR_8g469400 27.273 264 170 6 21 282 32 275 2.64e-31 119
MS.gene040550.t1 MTR_1g070085 31.852 270 151 8 28 282 9 260 7.09e-31 118
MS.gene040550.t1 MTR_1g070085 31.852 270 151 8 28 282 9 260 7.09e-31 118
MS.gene040550.t1 MTR_5g022020 33.884 242 125 10 54 278 38 261 7.28e-31 118
MS.gene040550.t1 MTR_2g069060 32.653 245 125 7 55 282 27 248 1.19e-30 115
MS.gene040550.t1 MTR_4g093840 31.933 238 139 6 55 282 62 286 1.23e-30 118
MS.gene040550.t1 MTR_1g070120 32.197 264 157 8 28 282 10 260 1.53e-30 117
MS.gene040550.t1 MTR_7g045650 34.182 275 150 12 22 282 25 282 1.77e-30 116
MS.gene040550.t1 MTR_3g088565 31.667 240 134 9 55 282 3 224 1.79e-30 116
MS.gene040550.t1 MTR_2g069060 31.698 265 140 8 35 282 30 270 4.16e-30 116
MS.gene040550.t1 MTR_1g048940 30.268 261 169 7 27 282 18 270 4.97e-30 116
MS.gene040550.t1 MTR_5g048740 33.333 276 153 10 21 282 10 268 6.12e-30 115
MS.gene040550.t1 MTR_7g062580 31.502 273 162 11 21 282 19 277 6.90e-30 115
MS.gene040550.t1 MTR_1g034140 34.137 249 129 11 54 282 26 259 7.40e-30 115
MS.gene040550.t1 MTR_0009s0480 33.456 272 157 10 21 282 11 268 1.10e-29 113
MS.gene040550.t1 MTR_7g062600 32.353 272 160 12 22 282 16 274 1.17e-29 115
MS.gene040550.t1 MTR_7g062570 34.351 262 147 12 32 282 30 277 2.16e-29 114
MS.gene040550.t1 MTR_1g070080 31.579 266 157 9 28 282 9 260 2.34e-29 114
MS.gene040550.t1 MTR_5g032870 31.111 270 160 9 27 282 9 266 2.79e-29 114
MS.gene040550.t1 MTR_5g032880 32.000 275 151 11 27 282 347 604 3.44e-29 117
MS.gene040550.t1 MTR_5g032880 33.051 236 135 9 55 282 38 258 2.82e-26 108
MS.gene040550.t1 MTR_0009s0480 33.456 272 157 10 21 282 11 268 3.70e-29 114
MS.gene040550.t1 MTR_4g087120 32.283 254 134 9 55 282 26 267 3.81e-29 114
MS.gene040550.t1 MTR_7g056393 29.333 300 173 7 3 282 8 288 5.03e-29 114
MS.gene040550.t1 MTR_5g059130 26.538 260 169 7 33 282 20 267 1.07e-28 112
MS.gene040550.t1 MTR_4g087140 31.047 277 154 9 32 282 3 268 1.08e-28 112
MS.gene040550.t1 MTR_5g065010 29.670 273 168 10 21 282 3 262 1.46e-28 112
MS.gene040550.t1 MTR_5g048470 29.670 273 168 7 21 282 17 276 1.53e-28 112
MS.gene040550.t1 MTR_3g072820 29.958 237 146 6 54 282 41 265 2.48e-28 111
MS.gene040550.t1 MTR_7g078010 31.111 270 165 7 21 282 32 288 2.64e-28 110
MS.gene040550.t1 MTR_5g055680 30.741 270 165 9 22 282 13 269 1.01e-27 110
MS.gene040550.t1 MTR_7g078010 30.741 270 166 7 21 282 32 288 2.37e-27 109
MS.gene040550.t1 MTR_2g072890 29.213 267 165 10 27 282 23 276 2.51e-27 108
MS.gene040550.t1 MTR_4g087100 29.200 250 147 7 55 282 26 267 3.53e-27 108
MS.gene040550.t1 MTR_0328s0030 33.455 275 153 12 21 282 10 267 4.67e-27 108
MS.gene040550.t1 MTR_3g096500 31.295 278 157 8 24 280 32 296 4.74e-27 108
MS.gene040550.t1 MTR_5g059140 31.092 238 142 8 55 282 42 267 1.12e-26 107
MS.gene040550.t1 MTR_5g055820 30.000 280 157 11 21 282 12 270 1.21e-26 107
MS.gene040550.t1 MTR_2g102570 28.033 239 145 6 55 282 52 274 1.98e-26 106
MS.gene040550.t1 MTR_8g064200 30.627 271 167 9 21 282 17 275 2.20e-26 106
MS.gene040550.t1 MTR_8g064200 30.627 271 167 9 21 282 22 280 2.72e-26 106
MS.gene040550.t1 MTR_4g119410 29.044 272 168 7 21 282 32 288 3.34e-26 106
MS.gene040550.t1 MTR_2g072910 28.782 271 173 9 21 282 16 275 4.30e-26 103
MS.gene040550.t1 MTR_5g055900 30.224 268 149 9 32 282 23 269 6.78e-26 105
MS.gene040550.t1 MTR_6g464620 30.325 277 143 9 31 280 41 294 7.98e-26 105
MS.gene040550.t1 MTR_7g063730 31.985 272 160 12 22 282 29 286 1.15e-25 104
MS.gene040550.t1 MTR_8g006930 29.966 297 175 9 3 282 8 288 1.45e-25 104
MS.gene040550.t1 MTR_2g072910 28.413 271 174 9 21 282 16 275 2.28e-25 103
MS.gene040550.t1 MTR_7g451860 29.661 236 149 6 53 282 39 263 5.44e-25 102
MS.gene040550.t1 MTR_7g047670 29.661 236 149 6 53 282 39 263 5.44e-25 102
MS.gene040550.t1 MTR_1g102070 30.796 289 153 11 15 280 25 289 5.46e-25 102
MS.gene040550.t1 MTR_2g025120 29.289 239 141 8 54 282 3 223 5.51e-25 99.8
MS.gene040550.t1 MTR_5g055690 28.571 273 170 9 21 282 12 270 5.72e-25 100
MS.gene040550.t1 MTR_4g116010 29.362 235 146 8 55 282 50 271 1.16e-24 101
MS.gene040550.t1 MTR_1g081840 30.418 263 148 10 34 280 40 283 1.18e-24 102
MS.gene040550.t1 MTR_3g117485 29.279 222 139 8 69 282 66 277 1.51e-24 101
MS.gene040550.t1 MTR_5g048550 28.044 271 173 11 21 282 12 269 2.29e-24 100
MS.gene040550.t1 MTR_5g055690 28.205 273 171 9 21 282 12 270 2.47e-24 100
MS.gene040550.t1 MTR_2g025120 29.289 239 141 8 54 282 3 223 2.55e-24 100
MS.gene040550.t1 MTR_8g074050 29.412 238 146 9 55 282 52 277 6.56e-24 99.8
MS.gene040550.t1 MTR_3g072810 27.675 271 172 8 22 282 6 262 2.74e-23 97.4
MS.gene040550.t1 MTR_0009s0050 27.957 279 163 9 21 282 12 269 2.96e-23 97.8
MS.gene040550.t1 MTR_0009s0050 27.957 279 163 9 21 282 12 269 3.41e-23 97.8
MS.gene040550.t1 MTR_7g056353 28.464 267 148 10 21 282 34 262 3.91e-23 99.0
MS.gene040550.t1 MTR_5g048850 29.927 274 164 11 21 282 12 269 4.35e-23 95.9
MS.gene040550.t1 MTR_5g048850 29.562 274 165 11 21 282 12 269 1.40e-22 95.9
MS.gene040550.t1 MTR_7g062560 28.897 263 152 11 31 282 36 274 2.49e-22 95.5
MS.gene040550.t1 MTR_3g117485 30.244 205 125 8 86 282 11 205 4.82e-22 93.2
MS.gene040550.t1 MTR_7g016090 27.843 255 168 6 33 282 18 261 6.65e-22 94.0
MS.gene040550.t1 MTR_3g083370 29.339 242 137 10 54 282 3 223 6.74e-22 91.7
MS.gene040550.t1 MTR_7g016090 27.843 255 168 6 33 282 16 259 7.39e-22 93.6
MS.gene040550.t1 MTR_1g011580 27.119 236 146 7 55 282 63 280 1.02e-21 93.6
MS.gene040550.t1 MTR_8g033380 29.588 267 153 8 33 280 33 283 1.47e-21 93.2
MS.gene040550.t1 MTR_5g085330 28.571 238 144 8 54 282 4 224 1.77e-21 92.4
MS.gene040550.t1 MTR_5g055800 27.273 275 170 10 21 282 12 269 1.96e-21 92.8
MS.gene040550.t1 MTR_3g083370 29.796 245 132 11 54 282 3 223 2.33e-21 92.0
MS.gene040550.t1 MTR_8g074070 27.848 237 151 8 55 282 52 277 2.38e-21 92.4
MS.gene040550.t1 MTR_4g087130 27.899 276 162 11 32 282 3 266 4.13e-21 92.0
MS.gene040550.t1 MTR_2g083000 28.514 249 163 7 38 282 15 252 1.66e-20 89.7
MS.gene040550.t1 MTR_8g074070 27.039 233 139 8 55 282 52 258 2.44e-20 89.4
MS.gene040550.t1 MTR_5g048570 27.306 271 173 9 21 282 12 267 3.97e-20 89.0
MS.gene040550.t1 MTR_3g117420 26.891 238 152 8 55 282 52 277 5.14e-20 89.0
MS.gene040550.t1 MTR_5g005570 27.778 234 153 6 53 282 35 256 2.99e-19 86.3
MS.gene040550.t1 MTR_4g074130 25.820 244 147 8 53 282 38 261 3.19e-19 86.7
MS.gene040550.t1 MTR_2g083030 27.426 237 149 7 54 282 36 257 1.16e-18 84.7
MS.gene040550.t1 MTR_7g077670 29.752 242 150 9 49 282 4 233 1.51e-18 84.3
MS.gene040550.t1 MTR_1g033810 28.148 270 159 11 30 282 20 271 3.07e-18 84.0
MS.gene040550.t1 MTR_3g026150 29.615 260 163 12 32 282 34 282 3.34e-18 82.8
MS.gene040550.t1 MTR_7g016080 28.358 268 136 12 33 274 16 253 6.59e-18 82.4
MS.gene040550.t1 MTR_3g026150 30.342 234 146 10 55 282 60 282 9.00e-18 82.4
MS.gene040550.t1 MTR_8g093980 29.057 265 155 12 33 280 38 286 1.33e-17 82.0
MS.gene040550.t1 MTR_1g070100 31.694 183 105 6 108 282 8 178 2.14e-17 80.1
MS.gene040550.t1 MTR_1g070085 31.694 183 105 6 108 282 12 182 2.50e-17 80.1
MS.gene040550.t1 MTR_3g040410 28.926 242 138 8 55 282 6 227 4.50e-17 80.1
MS.gene040550.t1 MTR_2g070870 26.316 247 136 10 55 282 28 247 5.06e-17 80.1
MS.gene040550.t1 MTR_8g093930 27.083 288 174 12 16 282 5 277 5.40e-17 80.5
MS.gene040550.t1 MTR_8g461330 25.506 247 148 8 54 282 26 254 8.09e-17 79.7
MS.gene040550.t1 MTR_8g009180 38.710 124 61 3 163 282 100 212 1.03e-16 78.6
MS.gene040550.t1 MTR_3g088745 27.547 265 153 11 34 280 23 266 3.42e-16 78.2
MS.gene040550.t1 MTR_2g437380 29.592 196 115 8 97 282 1 183 3.93e-16 76.6
MS.gene040550.t1 MTR_2g019370 26.506 249 140 9 55 282 28 254 4.83e-16 77.4
MS.gene040550.t1 MTR_1g043840 35.345 116 64 3 168 281 50 156 8.00e-16 76.6
MS.gene040550.t1 MTR_4g123020 26.122 245 142 7 55 282 20 242 8.07e-16 76.6
MS.gene040550.t1 MTR_6g092620 26.860 242 143 9 55 282 3 224 2.22e-15 75.1
MS.gene040550.t1 MTR_2g033270 27.092 251 135 8 52 282 16 238 2.24e-15 75.5
MS.gene040550.t1 MTR_4g115990 29.534 193 103 7 97 282 84 250 2.37e-15 75.1
MS.gene040550.t1 MTR_0056s0160 31.544 149 90 3 139 282 13 154 4.09e-15 73.2
MS.gene040550.t1 MTR_7g037530 37.383 107 50 2 4 106 1 94 1.22e-14 69.3
MS.gene040550.t1 MTR_0009s0050 30.405 148 87 5 142 282 33 171 9.87e-14 69.7
MS.gene040550.t1 MTR_0009s0050 30.405 148 87 5 142 282 33 171 1.06e-13 69.7
MS.gene040550.t1 MTR_0009s0050 40.541 74 36 2 210 282 23 89 1.29e-13 68.2
MS.gene040550.t1 MTR_1g032240 46.032 63 27 1 213 275 62 117 8.18e-13 65.9
MS.gene040550.t1 MTR_4g096840 26.749 243 145 8 55 282 29 253 1.49e-12 67.0
MS.gene040550.t1 MTR_1g086550 24.060 266 153 8 45 282 10 254 1.52e-12 67.4
MS.gene040550.t1 MTR_0009s0400 44.444 72 32 2 212 282 1 65 2.38e-12 63.9
MS.gene040550.t1 MTR_6g088665 25.391 256 161 8 50 281 13 262 2.57e-12 66.6
MS.gene040550.t1 MTR_7g056370 26.882 186 116 7 21 195 11 187 4.99e-12 64.3
MS.gene040550.t1 MTR_3g026150 30.387 181 112 8 107 282 8 179 9.63e-12 63.9
MS.gene040550.t1 MTR_3g464530 25.610 246 148 9 49 282 30 252 2.11e-11 63.2
MS.gene040550.t1 MTR_1g044105 30.882 136 81 5 21 146 19 151 2.41e-11 61.6
MS.gene040550.t1 MTR_6g088665 22.481 258 165 7 50 281 13 261 2.43e-11 63.5
MS.gene040550.t1 MTR_4g132770 42.029 69 32 2 215 282 32 93 4.52e-11 60.5
MS.gene040550.t1 MTR_8g102600 23.695 249 152 10 58 281 15 250 6.47e-11 62.4
MS.gene040550.t1 MTR_3g464530 25.203 246 149 9 49 282 30 252 8.85e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene040550.t1 AT3G12900 55.273 275 116 3 9 282 9 277 3.31e-110 323
MS.gene040550.t1 AT3G13610 45.775 284 142 6 2 282 8 282 6.82e-86 261
MS.gene040550.t1 AT1G55290 45.357 280 141 5 7 282 11 282 2.22e-84 257
MS.gene040550.t1 AT5G12270 40.433 277 149 8 13 282 12 279 4.50e-57 187
MS.gene040550.t1 AT5G43450 36.879 282 157 7 9 282 12 280 5.77e-49 164
MS.gene040550.t1 AT5G43440 36.806 288 152 11 9 282 12 283 1.27e-48 163
MS.gene040550.t1 AT5G43450 36.879 282 157 7 9 282 12 280 1.96e-48 165
MS.gene040550.t1 AT5G43440 36.806 288 152 11 9 282 12 283 8.01e-48 163
MS.gene040550.t1 AT2G30830 36.090 266 157 5 21 282 20 276 6.55e-47 160
MS.gene040550.t1 AT5G59530 36.264 273 150 8 21 282 23 282 1.93e-46 159
MS.gene040550.t1 AT5G59540 34.545 275 155 7 20 282 23 284 2.65e-46 157
MS.gene040550.t1 AT5G59540 34.182 275 156 7 20 282 23 284 3.57e-45 156
MS.gene040550.t1 AT1G06640 36.496 274 152 8 20 282 24 286 8.17e-45 154
MS.gene040550.t1 AT1G06620 34.572 269 160 6 20 282 25 283 1.80e-44 152
MS.gene040550.t1 AT1G06640 36.667 270 149 8 20 278 24 282 2.64e-44 152
MS.gene040550.t1 AT1G06640 36.496 274 152 8 20 282 24 286 2.79e-44 154
MS.gene040550.t1 AT2G36690 34.432 273 160 6 21 282 20 284 5.77e-44 153
MS.gene040550.t1 AT2G36690 34.432 273 160 6 21 282 20 284 5.77e-44 153
MS.gene040550.t1 AT1G06620 34.572 269 160 6 20 282 25 283 7.93e-44 153
MS.gene040550.t1 AT4G10500 33.591 259 155 6 31 282 18 266 2.50e-43 151
MS.gene040550.t1 AT1G04350 33.708 267 164 5 20 282 20 277 4.11e-43 150
MS.gene040550.t1 AT3G61400 33.779 299 165 8 2 282 5 288 1.83e-42 147
MS.gene040550.t1 AT1G03410 33.457 269 166 4 20 282 18 279 3.06e-42 149
MS.gene040550.t1 AT4G10490 32.946 258 156 7 32 282 17 264 5.48e-42 147
MS.gene040550.t1 AT1G03410 33.457 269 166 4 20 282 55 316 5.51e-42 149
MS.gene040550.t1 AT1G06650 35.125 279 149 9 20 282 24 286 6.61e-42 146
MS.gene040550.t1 AT1G06650 35.125 279 149 9 20 282 24 286 1.58e-41 147
MS.gene040550.t1 AT3G61400 33.445 299 166 8 2 282 5 288 2.15e-41 146
MS.gene040550.t1 AT2G30840 32.971 276 156 8 21 282 20 280 3.47e-41 144
MS.gene040550.t1 AT3G55970 32.143 280 160 10 22 282 14 282 5.76e-41 144
MS.gene040550.t1 AT2G30840 32.721 272 162 7 21 282 20 280 6.17e-41 145
MS.gene040550.t1 AT2G30840 32.841 271 161 7 21 281 20 279 7.78e-41 145
MS.gene040550.t1 AT3G55970 31.786 280 161 10 22 282 14 282 5.62e-40 142
MS.gene040550.t1 AT1G03400 32.721 272 152 7 21 282 19 269 5.78e-40 143
MS.gene040550.t1 AT1G03400 32.353 272 153 7 21 282 19 269 7.18e-40 142
MS.gene040550.t1 AT1G04380 33.068 251 159 3 32 282 22 263 1.25e-37 134
MS.gene040550.t1 AT2G25450 31.599 269 165 6 21 282 20 276 1.50e-37 136
MS.gene040550.t1 AT1G06645 33.333 282 147 11 20 282 37 296 3.99e-37 135
MS.gene040550.t1 AT1G04380 32.806 253 157 5 32 282 22 263 2.05e-36 133
MS.gene040550.t1 AT1G77330 33.333 243 128 7 55 282 3 226 6.59e-35 128
MS.gene040550.t1 AT3G19000 31.579 285 152 12 24 282 2 269 2.51e-34 125
MS.gene040550.t1 AT3G19000 31.579 285 152 12 24 282 2 269 1.42e-33 125
MS.gene040550.t1 AT5G05600 30.545 275 166 8 22 282 27 290 2.45e-33 123
MS.gene040550.t1 AT4G22880 30.000 280 168 10 22 282 7 277 7.58e-33 124
MS.gene040550.t1 AT4G22880 30.000 280 168 10 22 282 7 277 7.58e-33 124
MS.gene040550.t1 AT4G22880 30.000 280 168 10 22 282 7 277 7.58e-33 124
MS.gene040550.t1 AT3G19010 32.836 268 147 11 37 282 8 264 7.97e-33 122
MS.gene040550.t1 AT3G11180 31.047 277 162 10 22 282 56 319 1.76e-32 123
MS.gene040550.t1 AT3G11180 31.047 277 162 10 22 282 56 319 1.86e-32 123
MS.gene040550.t1 AT3G19010 32.463 268 148 11 37 282 8 264 2.03e-32 122
MS.gene040550.t1 AT3G19010 32.463 268 148 11 37 282 8 264 2.03e-32 122
MS.gene040550.t1 AT5G05600 30.182 275 167 8 22 282 27 290 2.59e-32 122
MS.gene040550.t1 AT2G44800 31.461 267 164 9 25 282 19 275 4.31e-32 122
MS.gene040550.t1 AT3G51240 34.052 232 138 7 54 278 37 260 6.36e-32 121
MS.gene040550.t1 AT3G60290 31.086 267 165 8 25 282 19 275 3.92e-30 116
MS.gene040550.t1 AT2G38240 30.909 275 162 12 22 282 12 272 8.21e-30 115
MS.gene040550.t1 AT5G24530 29.520 271 161 10 25 282 5 258 8.96e-30 115
MS.gene040550.t1 AT1G15550 30.252 238 142 6 54 282 56 278 1.85e-29 114
MS.gene040550.t1 AT4G25420 32.463 268 148 9 33 282 40 292 7.61e-29 112
MS.gene040550.t1 AT5G07480 27.863 262 166 8 33 282 24 274 1.62e-28 112
MS.gene040550.t1 AT3G19010 32.016 253 139 9 37 282 8 234 4.72e-28 110
MS.gene040550.t1 AT4G25420 31.970 269 144 10 33 280 40 290 6.78e-28 110
MS.gene040550.t1 AT4G16330 29.289 239 146 8 53 282 65 289 1.20e-27 110
MS.gene040550.t1 AT5G08640 31.760 233 142 7 56 280 41 264 1.33e-27 109
MS.gene040550.t1 AT5G08640 31.760 233 142 7 56 280 41 264 1.33e-27 109
MS.gene040550.t1 AT1G60980 29.520 271 154 8 32 280 35 290 1.46e-26 107
MS.gene040550.t1 AT4G25300 31.667 240 138 9 55 282 52 277 3.05e-26 105
MS.gene040550.t1 AT3G21420 30.797 276 166 10 22 282 17 282 1.17e-25 104
MS.gene040550.t1 AT5G51810 30.189 265 156 8 32 282 41 290 1.86e-25 102
MS.gene040550.t1 AT1G17020 28.409 264 162 11 33 282 29 279 3.30e-25 103
MS.gene040550.t1 AT1G17010 29.536 237 151 7 53 282 52 279 5.57e-25 102
MS.gene040550.t1 AT1G05010 30.638 235 141 7 55 282 4 223 6.82e-25 101
MS.gene040550.t1 AT5G07200 29.242 277 159 10 25 280 29 289 8.68e-25 102
MS.gene040550.t1 AT5G51810 30.038 263 155 8 32 280 41 288 1.02e-24 102
MS.gene040550.t1 AT1G78550 29.457 258 165 9 33 282 29 277 1.10e-24 101
MS.gene040550.t1 AT1G62380 29.362 235 144 7 55 282 7 226 1.16e-24 101
MS.gene040550.t1 AT1G80340 28.814 236 146 6 55 282 50 271 1.38e-24 101
MS.gene040550.t1 AT3G51240 34.091 176 105 5 107 278 8 176 7.02e-24 98.2
MS.gene040550.t1 AT1G80330 26.829 246 155 7 48 282 42 273 3.72e-23 97.4
MS.gene040550.t1 AT4G21200 29.060 234 147 6 54 282 41 260 6.66e-23 96.7
MS.gene040550.t1 AT4G25310 32.420 219 126 10 72 282 70 274 9.33e-23 96.7
MS.gene040550.t1 AT5G63580 31.064 235 142 8 55 282 19 240 1.16e-22 94.0
MS.gene040550.t1 AT5G20400 27.843 255 158 10 38 282 33 271 1.21e-22 96.3
MS.gene040550.t1 AT1G12010 28.632 234 147 7 55 282 7 226 1.47e-22 95.5
MS.gene040550.t1 AT5G63580 30.901 233 141 8 55 280 19 238 1.84e-22 94.0
MS.gene040550.t1 AT5G63595 28.571 245 140 7 40 280 11 224 2.25e-22 94.4
MS.gene040550.t1 AT5G63590 29.150 247 150 9 42 280 6 235 2.87e-21 91.7
MS.gene040550.t1 AT4G16330 28.804 184 114 6 107 282 9 183 6.08e-20 87.0
MS.gene040550.t1 AT1G78550 30.392 204 128 7 84 282 5 199 8.05e-20 87.0
MS.gene040550.t1 AT5G63600 27.049 244 154 7 46 282 24 250 1.03e-19 87.8
MS.gene040550.t1 AT5G63600 26.860 242 153 7 46 280 24 248 1.42e-19 87.4
MS.gene040550.t1 AT5G54000 27.381 252 161 9 39 282 35 272 2.00e-19 87.0
MS.gene040550.t1 AT1G49390 28.516 256 153 11 39 282 34 271 2.16e-19 87.0
MS.gene040550.t1 AT1G44090 30.738 244 139 10 54 280 62 292 4.86e-19 86.3
MS.gene040550.t1 AT5G20550 28.731 268 159 13 33 282 19 272 1.99e-18 84.3
MS.gene040550.t1 AT5G54000 28.079 203 127 8 88 282 1 192 1.59e-16 77.8
MS.gene040550.t1 AT4G21690 26.471 238 148 8 55 278 47 271 3.38e-16 77.8
MS.gene040550.t1 AT4G25300 37.931 116 57 4 174 282 76 183 3.43e-16 77.0
MS.gene040550.t1 AT1G47990 28.455 246 139 9 54 282 14 239 7.84e-16 76.6
MS.gene040550.t1 AT1G78440 26.122 245 145 8 55 282 18 243 8.89e-16 76.6
MS.gene040550.t1 AT1G30040 27.888 251 132 9 54 282 30 253 1.33e-15 75.5
MS.gene040550.t1 AT1G50960 26.587 252 157 9 42 282 27 261 1.60e-15 75.9
MS.gene040550.t1 AT1G30040 27.888 251 132 9 54 282 30 253 2.81e-15 75.1
MS.gene040550.t1 AT5G43935 25.738 237 145 9 50 280 10 221 3.74e-15 74.3
MS.gene040550.t1 AT3G49620 25.984 254 153 10 55 282 34 278 4.53e-15 74.7
MS.gene040550.t1 AT2G19590 27.731 238 145 10 54 282 10 229 7.44e-15 73.6
MS.gene040550.t1 AT1G49390 26.733 202 131 8 88 282 1 192 7.90e-14 70.5
MS.gene040550.t1 AT5G51310 26.971 241 153 5 54 282 4 233 8.02e-14 70.9
MS.gene040550.t1 AT4G23340 27.907 215 133 10 78 282 30 232 4.69e-13 68.6
MS.gene040550.t1 AT3G49630 25.328 229 146 8 70 282 34 253 2.97e-12 66.2
MS.gene040550.t1 AT3G50210 24.621 264 149 8 55 282 8 257 3.32e-12 66.2
MS.gene040550.t1 AT3G50210 24.621 264 149 8 55 282 8 257 3.32e-12 66.2
MS.gene040550.t1 AT3G50210 24.621 264 149 8 55 282 8 257 3.32e-12 66.2
MS.gene040550.t1 AT3G49630 25.328 229 146 8 70 282 30 249 3.71e-12 66.2
MS.gene040550.t1 AT5G07480 25.000 160 112 4 128 282 9 165 7.12e-12 64.3
MS.gene040550.t1 AT3G47190 25.984 254 144 11 50 282 27 257 3.49e-11 63.2
MS.gene040550.t1 AT3G46500 25.620 242 150 10 58 281 20 249 6.72e-11 62.0
MS.gene040550.t1 AT3G46500 25.620 242 150 10 58 281 20 249 6.78e-11 62.4

Find 50 sgRNAs with CRISPR-Local

Find 77 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTGTTCCTTTGGAGTTAT+TGG 0.184201 2.3:+27097038 MS.gene040550:CDS
TTTGTTGATTCTTTCATTTA+TGG 0.199358 2.3:-27096887 None:intergenic
TTGTTGATTCTTTCATTTAT+GGG 0.253546 2.3:-27096886 None:intergenic
ATGGAAAGATTATATTAATA+TGG 0.306391 2.3:+27097197 MS.gene040550:CDS
CAATGTTGGTGATGCTTTAG+AGG 0.314053 2.3:+27098004 MS.gene040550:CDS
ATCAAAGGCTTAGTAGATTC+AGG 0.318766 2.3:+27096832 MS.gene040550:CDS
AGAATCTAATTGGTTTGAAA+AGG 0.354781 2.3:+27097787 MS.gene040550:CDS
ATGAAGATGCTCTTCAATAT+TGG 0.357545 2.3:+27097232 MS.gene040550:CDS
AGTGAATCATTGTGTTCCTT+TGG 0.366769 2.3:+27097029 MS.gene040550:CDS
AGGTCTGGATTTGGGCATGC+TGG 0.377896 2.3:-27097828 None:intergenic
AGTAGATTCAGGTTTATTAG+AGG 0.385396 2.3:+27096843 MS.gene040550:CDS
CCAACCGTAAGGTCTGGATT+TGG 0.389550 2.3:-27097837 None:intergenic
CAACCGTAAGGTCTGGATTT+GGG 0.390182 2.3:-27097836 None:intergenic
TTGAGCTTTGATAAGTCAAT+TGG 0.399141 2.3:-27096937 None:intergenic
GTGCTTCTTCAAGATGGAAT+TGG 0.417564 2.3:+27097894 MS.gene040550:CDS
CAAGATAGTAAAAGTCATCT+TGG 0.426383 2.3:+27097716 MS.gene040550:CDS
TGGACTTACTTGCACTCATT+AGG 0.433113 2.3:-27097255 None:intergenic
GAATCTAATTGGTTTGAAAA+GGG 0.445047 2.3:+27097788 MS.gene040550:CDS
ATGACTAAAGCTCCAGGTAT+TGG 0.458680 2.3:-27097981 None:intergenic
GTTAGAGCAGCAGAAACTCT+TGG 0.459549 2.3:+27096994 MS.gene040550:CDS
CTTCTTCAAGATGGAATTGG+TGG 0.467099 2.3:+27097897 MS.gene040550:CDS
GGTCTGGATTTGGGCATGCT+GGG 0.474545 2.3:-27097827 None:intergenic
TACAACTTTATTGTAAGAGA+TGG 0.482653 2.3:+27096802 MS.gene040550:CDS
GTACAATGAATTTGAAGTGT+TGG 0.486640 2.3:-27096782 None:intergenic
CTTGAAATTCCACCAATACC+TGG 0.500507 2.3:+27097969 MS.gene040550:CDS
AGCTTTGATAAGTCAATTGG+TGG 0.502375 2.3:-27096934 None:intergenic
GTAGGGCGTCACTCAGATGC+AGG 0.508188 2.3:+27097861 MS.gene040550:CDS
ATCACAGTGCTTCTTCAAGA+TGG 0.509919 2.3:+27097888 MS.gene040550:CDS
GAAATACTAATTAGTAAGCT+AGG 0.523115 2.3:+27097738 MS.gene040550:CDS
ATGCCCAAATCCAGACCTTA+CGG 0.525674 2.3:+27097833 MS.gene040550:CDS
CAGACCTTACGGTTGGTGTA+GGG 0.528479 2.3:+27097844 MS.gene040550:CDS
CCAGACCTTACGGTTGGTGT+AGG 0.536978 2.3:+27097843 MS.gene040550:CDS
ATTGACTTATCAAAGCTCAA+TGG 0.537491 2.3:+27096940 MS.gene040550:CDS
ATTGATTCCAATAACTCCAA+AGG 0.537589 2.3:-27097045 None:intergenic
ACTAAAGCTCCAGGTATTGG+TGG 0.539395 2.3:-27097978 None:intergenic
AGAGATGGCAATGGAATCAA+AGG 0.558480 2.3:+27096817 MS.gene040550:CDS
AGATAGAAAATGTGTTGGAA+TGG 0.566822 2.3:+27097178 MS.gene040550:CDS
CCTACACCAACCGTAAGGTC+TGG 0.575913 2.3:-27097843 None:intergenic
ACTAATTAGTAAGCTAGGAG+TGG 0.586790 2.3:+27097743 MS.gene040550:CDS
GGAGCTTTAGTCATCAATGT+TGG 0.591446 2.3:+27097990 MS.gene040550:CDS
GCTGAGGATGAGATTGATGT+TGG 0.599638 2.3:+27097933 MS.gene040550:CDS
TCAATTGGTGGTATATCACA+TGG 0.603575 2.3:-27096922 None:intergenic
TTTATTGTAAGAGATGGCAA+TGG 0.606425 2.3:+27096808 MS.gene040550:CDS
ACATTGATGACTAAAGCTCC+AGG 0.610639 2.3:-27097987 None:intergenic
TTGATGTTGGCAAAGTAGAG+TGG 0.611600 2.3:+27097946 MS.gene040550:CDS
GACGCCCTACACCAACCGTA+AGG 0.611683 2.3:-27097848 None:intergenic
CCAAATCCAGACCTTACGGT+TGG 0.633845 2.3:+27097837 MS.gene040550:CDS
TCCTGAGATAGAAAATGTGT+TGG 0.641760 2.3:+27097173 MS.gene040550:CDS
TAGGGCGTCACTCAGATGCA+GGG 0.656324 2.3:+27097862 MS.gene040550:CDS
TGGCTTATATGTCAAAGCTG+AGG 0.757930 2.3:+27097917 MS.gene040550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTTATTATTATAAAAAGAT+GGG - chr2.3:27097616-27097635 None:intergenic 10.0%
!!! AAACAAATTTTAATTTATCA+AGG + chr2.3:27097484-27097503 MS.gene040550:intron 10.0%
!!! AATTTTTTAACTAAAGTAAT+TGG - chr2.3:27097304-27097323 None:intergenic 10.0%
!!! ACTTTAGTTAAAAAATTTTA+GGG + chr2.3:27097307-27097326 MS.gene040550:intron 10.0%
!!! TAATTATTTCTATATTATCA+GGG + chr2.3:27097662-27097681 MS.gene040550:intron 10.0%
!!! TACTTTAGTTAAAAAATTTT+AGG + chr2.3:27097306-27097325 MS.gene040550:intron 10.0%
!!! TTAATTATTTCTATATTATC+AGG + chr2.3:27097661-27097680 MS.gene040550:intron 10.0%
!! ATGGAAAGATTATATTAATA+TGG + chr2.3:27097197-27097216 MS.gene040550:CDS 15.0%
!! CTGTTATTATTATAAAAAGA+TGG - chr2.3:27097617-27097636 None:intergenic 15.0%
!!! ACAAAAAAAATTACATGTTT+TGG - chr2.3:27097541-27097560 None:intergenic 15.0%
!!! CATCTTTTTATAATAATAAC+AGG + chr2.3:27097615-27097634 MS.gene040550:intron 15.0%
!! TATAATAATAACAGGACTTA+TGG + chr2.3:27097623-27097642 MS.gene040550:intron 20.0%
!! TCAAAAATTGAGAATCTAAT+TGG + chr2.3:27097777-27097796 MS.gene040550:CDS 20.0%
!!! TTGTTGATTCTTTCATTTAT+GGG - chr2.3:27096889-27096908 None:intergenic 20.0%
!!! TTTGTTGATTCTTTCATTTA+TGG - chr2.3:27096890-27096909 None:intergenic 20.0%
! GAAATACTAATTAGTAAGCT+AGG + chr2.3:27097738-27097757 MS.gene040550:CDS 25.0%
! TACAACTTTATTGTAAGAGA+TGG + chr2.3:27096802-27096821 MS.gene040550:CDS 25.0%
!! AATTTTGTTGAGAAAGTAGA+TGG - chr2.3:27097278-27097297 None:intergenic 25.0%
!!! ACAGAACTGTCATTTTTTTT+AGG - chr2.3:27097381-27097400 None:intergenic 25.0%
!!! AGAATCTAATTGGTTTGAAA+AGG + chr2.3:27097787-27097806 MS.gene040550:CDS 25.0%
!!! AGATGGGTTAAATAAGTTTT+TGG - chr2.3:27097600-27097619 None:intergenic 25.0%
!!! GAATCTAATTGGTTTGAAAA+GGG + chr2.3:27097788-27097807 MS.gene040550:CDS 25.0%
ACAGTTCTGTAAAACTAATG+TGG + chr2.3:27097391-27097410 MS.gene040550:intron 30.0%
AGATAGAAAATGTGTTGGAA+TGG + chr2.3:27097178-27097197 MS.gene040550:CDS 30.0%
ATGAAGATGCTCTTCAATAT+TGG + chr2.3:27097232-27097251 MS.gene040550:CDS 30.0%
CAAGATAGTAAAAGTCATCT+TGG + chr2.3:27097716-27097735 MS.gene040550:CDS 30.0%
TGGAAAAGAACATGAAAAAG+TGG + chr2.3:27096960-27096979 MS.gene040550:CDS 30.0%
TTTAGTCCCTGTAAATATAG+CGG + chr2.3:27097341-27097360 MS.gene040550:intron 30.0%
TTTATTGTAAGAGATGGCAA+TGG + chr2.3:27096808-27096827 MS.gene040550:CDS 30.0%
! AACTTGTACTCACATTTTGT+CGG - chr2.3:27097125-27097144 None:intergenic 30.0%
! AGTAGATTCAGGTTTATTAG+AGG + chr2.3:27096843-27096862 MS.gene040550:CDS 30.0%
! ATTGACTTATCAAAGCTCAA+TGG + chr2.3:27096940-27096959 MS.gene040550:CDS 30.0%
! ATTGATTCCAATAACTCCAA+AGG - chr2.3:27097048-27097067 None:intergenic 30.0%
! CAAGATGACTTTTACTATCT+TGG - chr2.3:27097718-27097737 None:intergenic 30.0%
! GTACAATGAATTTGAAGTGT+TGG - chr2.3:27096785-27096804 None:intergenic 30.0%
! TTGAGCTTTGATAAGTCAAT+TGG - chr2.3:27096940-27096959 None:intergenic 30.0%
!! ATGGGTTGTATGTACATTTT+TGG - chr2.3:27096871-27096890 None:intergenic 30.0%
!!! TAAACAACTTTTTTCTCAGG+TGG - chr2.3:27097102-27097121 None:intergenic 30.0%
ACGAAATCCGCTATATTTAC+AGG - chr2.3:27097351-27097370 None:intergenic 35.0%
ACTAATTAGTAAGCTAGGAG+TGG + chr2.3:27097743-27097762 MS.gene040550:CDS 35.0%
AGTGAATCATTGTGTTCCTT+TGG + chr2.3:27097029-27097048 MS.gene040550:CDS 35.0%
ATCAAAGGCTTAGTAGATTC+AGG + chr2.3:27096832-27096851 MS.gene040550:CDS 35.0%
CGAAATCCGCTATATTTACA+GGG - chr2.3:27097350-27097369 None:intergenic 35.0%
GTTCTGTAAAACTAATGTGG+AGG + chr2.3:27097394-27097413 MS.gene040550:intron 35.0%
TCCTGAGATAGAAAATGTGT+TGG + chr2.3:27097173-27097192 MS.gene040550:CDS 35.0%
! AGCTTTGATAAGTCAATTGG+TGG - chr2.3:27096937-27096956 None:intergenic 35.0%
! TCAATTGGTGGTATATCACA+TGG - chr2.3:27096925-27096944 None:intergenic 35.0%
! TCCAACACATTTTCTATCTC+AGG - chr2.3:27097177-27097196 None:intergenic 35.0%
!! TTGTGTTCCTTTGGAGTTAT+TGG + chr2.3:27097038-27097057 MS.gene040550:CDS 35.0%
!!! CGGTAAACAACTTTTTTCTC+AGG - chr2.3:27097105-27097124 None:intergenic 35.0%
AGAGATGGCAATGGAATCAA+AGG + chr2.3:27096817-27096836 MS.gene040550:CDS 40.0%
ATCACAGTGCTTCTTCAAGA+TGG + chr2.3:27097888-27097907 MS.gene040550:CDS 40.0%
ATGACTAAAGCTCCAGGTAT+TGG - chr2.3:27097984-27098003 None:intergenic 40.0%
CTTCTTCAAGATGGAATTGG+TGG + chr2.3:27097897-27097916 MS.gene040550:CDS 40.0%
CTTGAAATTCCACCAATACC+TGG + chr2.3:27097969-27097988 MS.gene040550:CDS 40.0%
GTGCTTCTTCAAGATGGAAT+TGG + chr2.3:27097894-27097913 MS.gene040550:CDS 40.0%
TGGACTTACTTGCACTCATT+AGG - chr2.3:27097258-27097277 None:intergenic 40.0%
TGGCTTATATGTCAAAGCTG+AGG + chr2.3:27097917-27097936 MS.gene040550:CDS 40.0%
TTGATGTTGGCAAAGTAGAG+TGG + chr2.3:27097946-27097965 MS.gene040550:CDS 40.0%
! ACATTGATGACTAAAGCTCC+AGG - chr2.3:27097990-27098009 None:intergenic 40.0%
! GGAGCTTTAGTCATCAATGT+TGG + chr2.3:27097990-27098009 MS.gene040550:CDS 40.0%
!! CAATGTTGGTGATGCTTTAG+AGG + chr2.3:27098004-27098023 MS.gene040550:CDS 40.0%
ATGCCCAAATCCAGACCTTA+CGG + chr2.3:27097833-27097852 MS.gene040550:CDS 45.0%
CAACCGTAAGGTCTGGATTT+GGG - chr2.3:27097839-27097858 None:intergenic 45.0%
GCTGAGGATGAGATTGATGT+TGG + chr2.3:27097933-27097952 MS.gene040550:CDS 45.0%
GTTAGAGCAGCAGAAACTCT+TGG + chr2.3:27096994-27097013 MS.gene040550:CDS 45.0%
!! ACTAAAGCTCCAGGTATTGG+TGG - chr2.3:27097981-27098000 None:intergenic 45.0%
CCAAATCCAGACCTTACGGT+TGG + chr2.3:27097837-27097856 MS.gene040550:CDS 50.0%
CCAACCGTAAGGTCTGGATT+TGG - chr2.3:27097840-27097859 None:intergenic 50.0%
! CAGACCTTACGGTTGGTGTA+GGG + chr2.3:27097844-27097863 MS.gene040550:CDS 50.0%
AGGTCTGGATTTGGGCATGC+TGG - chr2.3:27097831-27097850 None:intergenic 55.0%
CCTACACCAACCGTAAGGTC+TGG - chr2.3:27097846-27097865 None:intergenic 55.0%
GGTCTGGATTTGGGCATGCT+GGG - chr2.3:27097830-27097849 None:intergenic 55.0%
! CCAGACCTTACGGTTGGTGT+AGG + chr2.3:27097843-27097862 MS.gene040550:CDS 55.0%
! TAGGGCGTCACTCAGATGCA+GGG + chr2.3:27097862-27097881 MS.gene040550:CDS 55.0%
GACGCCCTACACCAACCGTA+AGG - chr2.3:27097851-27097870 None:intergenic 60.0%
! GTAGGGCGTCACTCAGATGC+AGG + chr2.3:27097861-27097880 MS.gene040550:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 27096769 27098031 27096769 ID=MS.gene040550
chr2.3 mRNA 27096769 27098031 27096769 ID=MS.gene040550.t1;Parent=MS.gene040550
chr2.3 exon 27096769 27097268 27096769 ID=MS.gene040550.t1.exon1;Parent=MS.gene040550.t1
chr2.3 CDS 27096769 27097268 27096769 ID=cds.MS.gene040550.t1;Parent=MS.gene040550.t1
chr2.3 exon 27097683 27098031 27097683 ID=MS.gene040550.t1.exon2;Parent=MS.gene040550.t1
chr2.3 CDS 27097683 27098031 27097683 ID=cds.MS.gene040550.t1;Parent=MS.gene040550.t1
Gene Sequence

>MS.gene040550

ATGGCTCAAATTTCCAACACTTCAAATTCATTGTACAACTTTATTGTAAGAGATGGCAATGGAATCAAAGGCTTAGTAGATTCAGGTTTATTAGAGGTTCCAAAAATGTACATACAACCCATAAATGAAAGAATCAACAAACTAGACTCAAAACCATGTGATATACCACCAATTGACTTATCAAAGCTCAATGGAAAAGAACATGAAAAAGTGGTGAATGAGATTGTTAGAGCAGCAGAAACTCTTGGATTCTTTCAAGTAGTGAATCATTGTGTTCCTTTGGAGTTATTGGAATCAATTAAAGATTCAACACATGCATTTTTCAATATGCCACCTGAGAAAAAAGTTGTTTACCGACAAAATGTGAGTACAAGTTTAAAGATGAGATATCAAACTAGTTTTGCTCCTGAGATAGAAAATGTGTTGGAATGGAAAGATTATATTAATATGGTATATAGTAGTGATGAAGATGCTCTTCAATATTGGCCTAATGAGTGCAAGTAAGTCCATCTACTTTCTCAACAAAATTATACCAATTACTTTAGTTAAAAAATTTTAGGGTTAAATTAGTTTTTAGTCCCTGTAAATATAGCGGATTTCGTTTTTAGTCCTAAAAAAAATGACAGTTCTGTAAAACTAATGTGGAGGAACTTTTTATAATATTTTAAACAAGTCTGTAAAAATCATTCAAAAATTTAAAATTTTAAGCATAATTAAACAAATTTTAATTTATCAAGGATTAAAACTTGATGTTGAAAATTTTAGATGACCAAAACATGTAATTTTTTTTGTCATGACTAAAATCGAAATTTACTATATTTATAGAGACCAAAAACTTATTTAACCCATCTTTTTATAATAATAACAGGACTTATGGATCTTGTTAGTTAAATTAATTATTTCTATATTATCAGGGATGTTGCACTTGAATATTTGAAGTTATCATCCAAGATAGTAAAAGTCATCTTGGAAATACTAATTAGTAAGCTAGGAGTGGAATTAGATGACTCAAAAATTGAGAATCTAATTGGTTTGAAAAGGGTTAACATGAACTACTACCCAGCATGCCCAAATCCAGACCTTACGGTTGGTGTAGGGCGTCACTCAGATGCAGGGACTATCACAGTGCTTCTTCAAGATGGAATTGGTGGCTTATATGTCAAAGCTGAGGATGAGATTGATGTTGGCAAAGTAGAGTGGCTTGAAATTCCACCAATACCTGGAGCTTTAGTCATCAATGTTGGTGATGCTTTAGAGGTTTGA
Protein sequence

>MS.gene040550.t1

MAQISNTSNSLYNFIVRDGNGIKGLVDSGLLEVPKMYIQPINERINKLDSKPCDIPPIDLSKLNGKEHEKVVNEIVRAAETLGFFQVVNHCVPLELLESIKDSTHAFFNMPPEKKVVYRQNVSTSLKMRYQTSFAPEIENVLEWKDYINMVYSSDEDALQYWPNECKDVALEYLKLSSKIVKVILEILISKLGVELDDSKIENLIGLKRVNMNYYPACPNPDLTVGVGRHSDAGTITVLLQDGIGGLYVKAEDEIDVGKVEWLEIPPIPGALVINVGDALEV